View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16194_low_2 (Length: 553)

Name: NF16194_low_2
Description: NF16194
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16194_low_2
NF16194_low_2
[»] chr1 (15 HSPs)
chr1 (243-538)||(34317809-34318105)
chr1 (245-538)||(36684241-36684535)
chr1 (245-519)||(27711561-27711840)
chr1 (245-477)||(37403995-37404230)
chr1 (245-477)||(37409114-37409349)
chr1 (245-519)||(27716681-27716962)
chr1 (246-519)||(11250701-11250980)
chr1 (243-394)||(3585301-3585454)
chr1 (245-394)||(5725365-5725516)
chr1 (233-394)||(5730771-5730932)
chr1 (245-394)||(48245968-48246119)
chr1 (405-529)||(3584818-3584942)
chr1 (405-529)||(5730322-5730446)
chr1 (395-529)||(48246427-48246561)
chr1 (245-332)||(50958978-50959069)
[»] scaffold0055 (1 HSPs)
scaffold0055 (245-538)||(3299-3593)
[»] scaffold0052 (1 HSPs)
scaffold0052 (245-538)||(80942-81236)
[»] chr7 (29 HSPs)
chr7 (245-538)||(47994075-47994369)
chr7 (245-538)||(47999250-47999544)
chr7 (245-538)||(33238277-33238572)
chr7 (245-538)||(33243454-33243749)
chr7 (245-394)||(2233948-2234099)
chr7 (245-394)||(21080317-21080468)
chr7 (244-394)||(42572600-42572752)
chr7 (245-394)||(32211961-32212112)
chr7 (245-394)||(12935084-12935235)
chr7 (245-394)||(17496100-17496251)
chr7 (245-394)||(17556963-17557114)
chr7 (245-394)||(19308872-19309023)
chr7 (245-394)||(47176492-47176643)
chr7 (245-394)||(43893542-43893693)
chr7 (405-529)||(2234384-2234508)
chr7 (405-529)||(42572162-42572286)
chr7 (405-528)||(43893087-43893210)
chr7 (405-529)||(12934614-12934738)
chr7 (405-529)||(19309365-19309489)
chr7 (255-387)||(16538678-16538813)
chr7 (255-387)||(16626849-16626984)
chr7 (405-529)||(21080793-21080917)
chr7 (405-529)||(17495620-17495744)
chr7 (405-529)||(17557470-17557594)
chr7 (405-529)||(16539166-16539290)
chr7 (405-529)||(16626372-16626496)
chr7 (417-529)||(32212419-32212531)
chr7 (405-492)||(47176904-47176991)
chr7 (245-326)||(47544745-47544828)
[»] chr2 (12 HSPs)
chr2 (245-538)||(42728146-42728440)
chr2 (245-538)||(42722977-42723271)
chr2 (245-538)||(44096577-44096871)
chr2 (245-538)||(44754132-44754416)
chr2 (245-538)||(44759298-44759582)
chr2 (245-519)||(40392557-40392836)
chr2 (245-468)||(40519925-40520158)
chr2 (245-519)||(40518043-40518329)
chr2 (245-394)||(4162891-4163042)
chr2 (247-394)||(28751019-28751168)
chr2 (405-529)||(4163331-4163455)
chr2 (405-529)||(28751483-28751607)
[»] chr8 (19 HSPs)
chr8 (245-538)||(32010801-32011095)
chr8 (245-538)||(32015975-32016269)
chr8 (245-477)||(2165390-2165625)
chr8 (245-394)||(17955130-17955281)
chr8 (245-394)||(43998542-43998693)
chr8 (254-394)||(24885324-24885466)
chr8 (245-394)||(42513844-42513995)
chr8 (243-394)||(21641121-21641273)
chr8 (395-529)||(24884930-24885064)
chr8 (405-529)||(21643395-21643519)
chr8 (405-529)||(21643020-21643144)
chr8 (405-529)||(21642645-21642769)
chr8 (405-529)||(21641520-21641644)
chr8 (405-529)||(21641895-21642019)
chr8 (405-529)||(21642270-21642394)
chr8 (405-529)||(21643835-21643959)
chr8 (405-529)||(43998984-43999108)
chr8 (413-476)||(42514182-42514245)
chr8 (476-529)||(17955614-17955667)
[»] scaffold0014 (2 HSPs)
scaffold0014 (244-538)||(31820-32115)
scaffold0014 (245-535)||(26651-26942)
[»] chr6 (20 HSPs)
chr6 (244-538)||(22697767-22698063)
chr6 (245-519)||(22702944-22703223)
chr6 (245-519)||(21401979-21402258)
chr6 (245-417)||(29490808-29490982)
chr6 (245-394)||(2817397-2817548)
chr6 (245-394)||(34142781-34142932)
chr6 (245-394)||(34155397-34155548)
chr6 (244-394)||(6727772-6727924)
chr6 (244-394)||(34376464-34376616)
chr6 (245-394)||(24190650-24190802)
chr6 (405-529)||(31981780-31981904)
chr6 (245-394)||(31983475-31983626)
chr6 (405-528)||(34376147-34376270)
chr6 (405-529)||(2817901-2818025)
chr6 (405-521)||(24191126-24191242)
chr6 (405-521)||(24192223-24192339)
chr6 (417-521)||(34142314-34142418)
chr6 (417-521)||(34154930-34155034)
chr6 (405-467)||(6728193-6728255)
chr6 (434-529)||(29491005-29491103)
[»] chr4 (28 HSPs)
chr4 (244-538)||(40004302-40004597)
chr4 (245-538)||(39999344-39999638)
chr4 (245-538)||(54343478-54343772)
chr4 (245-538)||(54348632-54348926)
chr4 (245-538)||(36354417-36354710)
chr4 (245-538)||(36359603-36359896)
chr4 (245-519)||(8984983-8985262)
chr4 (245-519)||(13700748-13701027)
chr4 (245-519)||(21304531-21304810)
chr4 (245-519)||(8979863-8980142)
chr4 (245-519)||(21299411-21299690)
chr4 (245-519)||(54991714-54991993)
chr4 (245-519)||(54990388-54990667)
chr4 (245-394)||(53798329-53798480)
chr4 (245-394)||(41393858-41394009)
chr4 (245-394)||(13695757-13695908)
chr4 (245-394)||(13711370-13711521)
chr4 (245-394)||(51018702-51018853)
chr4 (245-394)||(9763269-9763420)
chr4 (245-394)||(4207042-4207192)
chr4 (405-529)||(9763771-9763895)
chr4 (405-529)||(13695379-13695503)
chr4 (395-529)||(51019117-51019251)
chr4 (405-529)||(53797846-53797970)
chr4 (405-528)||(13710887-13711010)
chr4 (245-394)||(47045616-47045767)
chr4 (405-529)||(41393462-41393584)
chr4 (405-521)||(47046060-47046176)
[»] chr3 (23 HSPs)
chr3 (245-538)||(15767717-15768011)
chr3 (244-535)||(15762555-15762847)
chr3 (245-538)||(20090187-20090482)
chr3 (245-538)||(20095312-20095607)
chr3 (244-519)||(55129028-55129309)
chr3 (245-519)||(17368957-17369236)
chr3 (245-394)||(3481645-3481796)
chr3 (245-394)||(34128405-34128558)
chr3 (243-394)||(54271312-54271465)
chr3 (245-394)||(30338096-30338247)
chr3 (245-394)||(30341200-30341351)
chr3 (245-394)||(17358566-17358716)
chr3 (245-394)||(3476188-3476339)
chr3 (245-394)||(4116946-4117097)
chr3 (405-531)||(3482166-3482292)
chr3 (405-521)||(17358063-17358179)
chr3 (405-521)||(54270870-54270986)
chr3 (405-521)||(4117345-4117461)
chr3 (405-521)||(34128923-34129039)
chr3 (405-529)||(10321660-10321784)
chr3 (405-528)||(3476699-3476822)
chr3 (405-506)||(30338506-30338607)
chr3 (430-475)||(10321816-10321861)
[»] chr5 (19 HSPs)
chr5 (243-519)||(17510296-17510577)
chr5 (245-519)||(17505191-17505472)
chr5 (245-519)||(42024591-42024870)
chr5 (245-477)||(42019856-42020090)
chr5 (236-519)||(43579898-43580188)
chr5 (245-519)||(41858831-41859102)
chr5 (245-383)||(41853846-41853988)
chr5 (245-394)||(24770601-24770752)
chr5 (245-394)||(36254517-36254668)
chr5 (245-394)||(1413068-1413220)
chr5 (245-394)||(24776055-24776206)
chr5 (245-394)||(26709688-26709839)
chr5 (245-394)||(26979422-26979573)
chr5 (405-529)||(24776563-24776687)
chr5 (405-529)||(1413806-1413930)
chr5 (405-529)||(24771108-24771232)
chr5 (405-529)||(26709320-26709444)
chr5 (405-529)||(26979054-26979178)
chr5 (405-529)||(36254053-36254177)
[»] scaffold0517 (1 HSPs)
scaffold0517 (245-477)||(3846-4081)
[»] scaffold0594 (2 HSPs)
scaffold0594 (243-394)||(8528-8681)
scaffold0594 (405-529)||(8962-9086)
[»] scaffold0166 (4 HSPs)
scaffold0166 (245-394)||(12982-13133)
scaffold0166 (245-394)||(18439-18590)
scaffold0166 (405-529)||(18946-19070)
scaffold0166 (405-528)||(13493-13616)
[»] scaffold0060 (2 HSPs)
scaffold0060 (395-529)||(37227-37361)
scaffold0060 (336-394)||(37654-37712)


Alignment Details
Target: chr1 (Bit Score: 277; Significance: 1e-155; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 243 - 538
Target Start/End: Original strand, 34317809 - 34318105
Alignment:
Q  243 actgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317809 actgttggaacactagtgtatattggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 34317908  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317909 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 34318008  T
Q  442 aaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34318009 aaaactgagaatcgaatactcttctctggttttctgcccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 34318105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 36684241 - 36684535
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684241 tgttggaacactagtgtatattggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 36684340  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36684341 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttgactccaa 36684440  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36684441 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 36684535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 27711840 - 27711561
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711840 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 27711741  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711740 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 27711641  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  27711640 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 27711561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 245 - 477
Target Start/End: Original strand, 37403995 - 37404230
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa--cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    |||||||||||||||||||| || |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37403995 tgttggaacactagtgtataatgaaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 37404094  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37404095 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagcccgggaatagtattcttcactcc 37404194  T
Q  442 aaaactgaaaatcgaatactcttctctggttttctc 477  Q
    |||||||| |||||||||||||||||||||||||||    
T  37404195 aaaactgagaatcgaatactcttctctggttttctc 37404230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 245 - 477
Target Start/End: Original strand, 37409114 - 37409349
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa--cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    |||||||||||||||||||| || |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409114 tgttggaacactagtgtataatgaaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 37409213  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 441  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37409214 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtataaatcctccttataaattgagagctcgggaatagtattcttcactcc 37409313  T
Q  442 aaaactgaaaatcgaatactcttctctggttttctc 477  Q
    |||||||| |||||||||||||||||||||||||||    
T  37409314 aaaactgagaatcgaatactcttctctggttttctc 37409349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 27716962 - 27716681
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa---cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    |||||||||||||||||||| ||||||||   |||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  27716962 tgttggaacactagtgtataatggaaaaaaaacttggagtatactagtgagtttgtggagcctttggaacgtaagcacaaggatggagaaactagtgtaa 27716863  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactc 440  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27716862 agtgtgaattgaaatttttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactc 27716763  T
Q  441 caaaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||||| |||||||||||||| |||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  27716762 caaaactgataatcgaatactcttatctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 27716681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 246 - 519
Target Start/End: Original strand, 11250701 - 11250980
Alignment:
Q  246 gttggaacactagtgtatattggaaaaa--cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||||||||||||||||| ||||||||  |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11250701 gttggaacactagtgtataatggaaaaaaacttggagtataccagtgagtttgtggagtctttggaatgtaaacacaaggatggagaaactagtgtaaag 11250800  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11250801 tgtgaattgaaaattttatgtcccacatcggttagatcacacactctagtagaaatcctccttataaattgagagctcgtgaatagtattctttactcca 11250900  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||| ||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  11250901 aaattgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 11250980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 243 - 394
Target Start/End: Complemental strand, 3585454 - 3585301
Alignment:
Q  243 actgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585454 actgttggaacactagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 3585355  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    | |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3585354 aatgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3585301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 5725516 - 5725365
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725516 tgttggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 5725417  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5725416 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 5725365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 233 - 394
Target Start/End: Complemental strand, 5730932 - 5730771
Alignment:
Q  233 aataaaagtgactgttggaacactagtgtatattggaaaaactt--gagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaa 330  Q
    ||||||||||  |||| ||||||||||||||| |||||||| ||  ||||||||||||  ||||||| | ||||||||||||||||||||||||||||||    
T  5730932 aataaaagtg--tgttagaacactagtgtataatggaaaaaatttggagtatactagttggtttgtgaaacctttggaatgtaaacacaaggatggagaa 5730835  T
Q  331 actagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5730834 actagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 5730771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 48245968 - 48246119
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||| ||||||| ||||| ||||||||| |||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  48245968 tgttggaacaatagtgtacattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaag 48246067  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  48246068 tgtgaattaaaatttttatgtcccacattgggtagatcacacactctagtag 48246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 3584942 - 3584818
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||| ||| | | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  3584942 tataaatagagagctcaggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 3584843  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  3584842 gacgaaccgttcttttcttcctcct 3584818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 5730446 - 5730322
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  5730446 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 5730347  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||  |||||||    
T  5730346 gacgaaccgttcttttattcctcct 5730322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 395 - 529
Target Start/End: Original strand, 48246427 - 48246561
Alignment:
Q  395 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgt 494  Q
    ||||||||  ||||||| |||| ||||| ||| | |||||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||      
T  48246427 aaatcctctctataaatagagacctcggaaatgggattcttcactacaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 48246526  T
Q  495 gatttgtgttgacgaatcgttcttttcctcctcct 529  Q
    | |||||||||||||| |||||||||| |||||||    
T  48246527 ggtttgtgttgacgaaccgttcttttcttcctcct 48246561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 245 - 332
Target Start/End: Original strand, 50958978 - 50959069
Alignment:
Q  245 tgttggaacactagtgtatattgga---aaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaac 332  Q
    |||||||||||||||||||| ||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50958978 tgttggaacactagtgtataatggaggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaagaatggagaaac 50959069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 275; Significance: 1e-153; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 3593 - 3299
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3593 tgttggaacactagtgtatattggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 3494  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3493 gtgaattgaaaattttatgtcccacatccggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 3394  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3393 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 3299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 275; Significance: 1e-153; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 80942 - 81236
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  80942 tgttggaacactagtgtatattggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 81041  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  81042 gtgaattgaaaattttatgtcccacatccggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 81141  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  81142 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 81236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 275; Significance: 1e-153; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 47994369 - 47994075
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994369 tgttggaacactagtgtatattgaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 47994270  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994269 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 47994170  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47994169 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 47994075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 47999544 - 47999250
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47999544 tgttggaacactagtgtatattggaaaaacttggagtatattagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaagt 47999445  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47999444 gtgaattgaaaattttatgtctcacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 47999345  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47999344 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 47999250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 33238572 - 33238277
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238572 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 33238473  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238472 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 33238373  T
Q  443 aaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33238372 aaactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 33238277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 33243749 - 33243454
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33243749 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacacaaggatggagaaactagtgtaaag 33243650  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33243649 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 33243550  T
Q  443 aaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  33243549 aaactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacaaatcgttcttttcctcctcctctttctgtg 33243454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 2233948 - 2234099
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2233948 tgttggaaccctagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaag 2234047  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2234048 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 2234099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 21080317 - 21080468
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080317 tgttggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 21080416  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  21080417 tgtgaattgaaaattttatgtcccacgttgggtagatcacacactctagtag 21080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 42572752 - 42572600
Alignment:
Q  244 ctgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  42572752 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaa 42572653  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42572652 gtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 42572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 32211961 - 32212112
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  32211961 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgttgagactttggaatgtaaacacaaggatggagaaactagtgtaaag 32212060  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  32212061 tgtgaattgaaaattttatgtctcacattgggtagatcacacactctagtag 32212112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 12935235 - 12935084
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  12935235 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaag 12935136  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  12935135 tgtgaattgaaaattttatgtcccacattgggtagatcacacactttagtag 12935084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 17496251 - 17496100
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  17496251 tgttggaacactagtatatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaag 17496152  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17496151 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 17496100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 17556963 - 17557114
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  17556963 tgttggaacactagtatatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaag 17557062  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17557063 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 17557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 19308872 - 19309023
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  19308872 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaag 19308971  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  19308972 tgtgaattgaaaattttatgtcccacattggatagatcacacactctagtag 19309023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 47176492 - 47176643
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||    
T  47176492 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 47176591  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47176592 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 47176643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 43893693 - 43893542
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||| ||||||    
T  43893693 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagcgtaaag 43893594  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43893593 tgtgaattgaaaattttatgtccctcattgggtagatcacacactctagtag 43893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 2234384 - 2234508
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  2234384 tataaatagagagctcgggattagtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 2234483  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  2234484 gacgaaccgttcttttcttcctcct 2234508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 42572286 - 42572162
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  42572286 tataaatagagaactcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 42572187  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| ||||||||||||||||||    
T  42572186 gacgaaccgttcttttcctcctcct 42572162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 405 - 528
Target Start/End: Complemental strand, 43893210 - 43893087
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||  || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  43893210 tataaatagagagctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 43893111  T
Q  505 gacgaatcgttcttttcctcctcc 528  Q
    ||||||||||||||||| ||||||    
T  43893110 gacgaatcgttcttttcttcctcc 43893087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 12934738 - 12934614
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  12934738 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 12934639  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    || ||| |||||||||| |||||||    
T  12934638 gatgaaccgttcttttcttcctcct 12934614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 19309365 - 19309489
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||| ||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  19309365 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcaaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 19309464  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    ||||||  |||||||||||||||||    
T  19309465 gacgaactgttcttttcctcctcct 19309489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 387
Target Start/End: Original strand, 16538678 - 16538813
Alignment:
Q  255 ctagtgtatattgg--aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattg 351  Q
    ||||| ||||||||  ||||||||| |||||||||||   | ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  16538678 ctagtctatattggcaaaaaacttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattg 16538777  T
Q  352 aaaattttatgtcccacatcgggtagatcacacact 387  Q
    |||||||||||||||| || | ||||||||||||||    
T  16538778 aaaattttatgtcccatattgagtagatcacacact 16538813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 387
Target Start/End: Complemental strand, 16626984 - 16626849
Alignment:
Q  255 ctagtgtatattgg--aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattg 351  Q
    ||||| ||||||||  ||||||||| |||||||||||   | ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  16626984 ctagtctatattggcaaaaaacttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattg 16626885  T
Q  352 aaaattttatgtcccacatcgggtagatcacacact 387  Q
    |||||||||||||||| || | ||||||||||||||    
T  16626884 aaaattttatgtcccatattgagtagatcacacact 16626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 21080793 - 21080917
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | | |||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| ||  | ||||||||    
T  21080793 tataaatagagagctcgggatttgcattcttcacttcaaaactgagaatcgaatcctcttctctggttttctccccttctcatcttcctcggtttgtgtt 21080892  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  21080893 gacgaaccgttcttttcttcctcct 21080917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 17495744 - 17495620
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | |||||| |||||||||| || ||| |||| |||||||||||||||||| ||||||||||||||  | ||||||||    
T  17495744 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctcgccttctcatctccctcggtttgtgtt 17495645  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  17495644 gacgaaccgttcttttcttcctcct 17495620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 17557470 - 17557594
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | |||||| |||||||||| || ||| |||| |||||||||||||||||| ||||||||||||||  | ||||||||    
T  17557470 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctcgccttctcatctccctcggtttgtgtt 17557569  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  17557570 gacgaaccgttcttttcttcctcct 17557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 16539166 - 16539290
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||  ||| |||||||||||||||||||| ||||||||||||  | ||||||||    
T  16539166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctcccattctcatctccctcggtttgtgtt 16539265  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    ||||||  ||||||||| |||||||    
T  16539266 gacgaacagttcttttcttcctcct 16539290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 16626496 - 16626372
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||  ||| |||||||||||||||||||| ||||||||||||  | ||||||||    
T  16626496 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctcccattctcatctccctcggtttgtgtt 16626397  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    ||||||  ||||||||| |||||||    
T  16626396 gacgaacagttcttttcttcctcct 16626372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 417 - 529
Target Start/End: Original strand, 32212419 - 32212531
Alignment:
Q  417 gctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttc 516  Q
    |||||||||| | ||||||||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||  | |||||||||| ||| |||||    
T  32212419 gctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctgattttctccccttctcatctccctcggtttgtgttgatgaaccgttc 32212518  T
Q  517 ttttcctcctcct 529  Q
    ||||| |||||||    
T  32212519 ttttcttcctcct 32212531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 405 - 492
Target Start/End: Original strand, 47176904 - 47176991
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctccc 492  Q
    ||||||| ||||||||||||||   ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||    
T  47176904 tataaatagagagctcgggaatgagattcttcactccaaaaccgataatcgaatcctcttctctggttttctccccttctcatctccc 47176991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 47544745 - 47544828
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgg 326  Q
    |||||||||||||||||||| || ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47544745 tgttggaacactagtgtataatgaaaaaaacttggagtatactagagagtttgtggagcctttggaatgtaaacacaaggatgg 47544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 275; Significance: 1e-153; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 42728146 - 42728440
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728146 tgttggaacactagtgtatattggaaaaacttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 42728245  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728246 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 42728345  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42728346 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 42728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 42722977 - 42723271
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42722977 tgttggaacactagtgtatattggaaaaatttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 42723076  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723077 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 42723176  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  42723177 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgagtcgttcttttcctcctcctctttctgtg 42723271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 44096871 - 44096577
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  44096871 tgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcatttggaatgtaaacaaaaggatggagaaactagtgtaaagt 44096772  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44096771 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaa 44096672  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44096671 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 44096577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 44754132 - 44754416
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  44754132 tgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagt 44754231  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754232 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 44754331  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||          ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44754332 aactgagaatcgaatactc----------ttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 44754416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 44759298 - 44759582
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||    
T  44759298 tgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaattagtgtaaagt 44759397  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44759398 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 44759497  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||          ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44759498 aactgagaatcgaatactc----------ttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 44759582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 40392836 - 40392557
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  40392836 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttgcaatgtaaacataaggatggagaaactagtgtaaag 40392737  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392736 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 40392637  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||| ||||||| ||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  40392636 aaactgagaatcgaatacttttctctgattttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 40392557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 245 - 468
Target Start/End: Complemental strand, 40520158 - 40519925
Alignment:
Q  245 tgttggaacactagtgtatattgga---aaaacttg--agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgta 339  Q
    |||||||||||||||||||| ||||   ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520158 tgttggaacactagtgtataatggaggaaaaacttgggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgta 40520059  T
Q  340 aagtgtgaattgaaaattttatgtcccacatc-gggtagatcacacactctagtagaaatcctcctt----ataaattgagagctcgggaatagtattct 434  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||    
T  40520058 aagtgtgaattgaaaattttatgtcccacatcggggtagatcacacactctagtagaaatcctccttatgaataaattgagagctcgggaatagtattct 40519959  T
Q  435 tcactccaaaactgaaaatcgaatactcttctct 468  Q
    ||||||||||||||| ||||||||||||||||||    
T  40519958 tcactccaaaactgagaatcgaatactcttctct 40519925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 245 - 519
Target Start/End: Original strand, 40518043 - 40518329
Alignment:
Q  245 tgttggaacactagtgtatattgga---aaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    |||||||||||||||||||| ||||   |||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40518043 tgttggaacactagtgtataatggaggaaaaacttggagtataatagtgagtttgtggagcctttggaatataaacacaaggatggagaaactagtgtaa 40518142  T
Q  341 agtgtgaattgaaaattttatgtcccacatc-gggtagatcacacactctagtagaaatcctcctt----ataaattgagagctcgggaatagtattctt 435  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||    
T  40518143 agtgtgaattgaaaattttatgtcccacatcggggtagatcacacactctagtagaaatcctccttattaataaattgagagctcgtgaatagtattctt 40518242  T
Q  436 cactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctccc----gtgatttgtgttgacgaatcgttcttt 519  Q
    |||||||||||||| |||||||||||||||||| |||||||| || |||| ||||||    | | |||||||||||||| ||||||||    
T  40518243 cactccaaaactgagaatcgaatactcttctcttgttttctctcc-tctcttctccctccagcggtttgtgttgacgaaccgttcttt 40518329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 4162891 - 4163042
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||| ||||||| |||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4162891 tgttggaacactggtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 4162990  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4162991 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 247 - 394
Target Start/End: Original strand, 28751019 - 28751168
Alignment:
Q  247 ttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtg 344  Q
    |||||||||||||||||||||| ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751019 ttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtg 28751118  T
Q  345 tgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28751119 tgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 28751168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 4163331 - 4163455
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  4163331 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 4163430  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  4163431 gacgaaccgttcttttcttcctcct 4163455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 28751483 - 28751607
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| ||||||||||||||   ||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||  | ||||||||    
T  28751483 tataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctcggtttgtgtt 28751582  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  28751583 gacgaaccgttcttttcttcctcct 28751607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 32011095 - 32010801
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32011095 tgttggaacactagtgtatattggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 32010996  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32010995 gtgaattgaaaattttatgtcccacatcgggtagatcatacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 32010896  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  32010895 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttttgtg 32010801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 32016269 - 32015975
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32016269 tgttggaacactagtgtatattggaaaaacttggagtatactagtgaatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 32016170  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32016169 gtgaattgaaaattttatgtcccacattgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 32016070  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32016069 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 32015975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 245 - 477
Target Start/End: Original strand, 2165390 - 2165625
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaactt--gagtatactagtgagtttgtggagcctttgg-aatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    |||||||||||||||||||| || ||||| ||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  2165390 tgttggaacactagtgtataatgaaaaaattttggagtatactagtgagtttgtggagtctttgggaatgtaaacacaaggatggagaaactagtgtaaa 2165489  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 441  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2165490 gtgtgaattgaaaattttatgtctcacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 2165589  T
Q  442 aaaactgaaaatcgaatactcttctctggttttctc 477  Q
    |||| ||| |||| ||| ||||||||| ||||||||    
T  2165590 aaaattgagaatcaaatgctcttctctagttttctc 2165625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 17955130 - 17955281
Alignment:
Q  245 tgttggaacactagtgtatattggaaaa-actt-gagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17955130 tgttggaacactagtgtataatggaaaagacttagagtatactagttgttttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtgaag 17955229  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17955230 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 17955281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 43998542 - 43998693
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43998542 tgttggaacactagtgtataatgaaaaaaacttggagtatactagttggtttgtggagcctttgaaatgtaaacacaaggatggagaaactagtgtaaag 43998641  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  43998642 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 43998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 254 - 394
Target Start/End: Complemental strand, 24885466 - 24885324
Alignment:
Q  254 actagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattg 351  Q
    ||||||||||||||| ||||||||| |||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24885466 actagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattg 24885367  T
Q  352 aaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  24885366 aaaattttatgtcccacattgggtagatcacacactctagtag 24885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 42513844 - 42513995
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | ||||||| | |||||||||||||||||||||| ||||| ||||||||||    
T  42513844 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaaatagtgtaaag 42513943  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  42513944 tgtgaattgaaaattttatgtcccacattggatagatcacacactctagtag 42513995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 243 - 394
Target Start/End: Original strand, 21641121 - 21641273
Alignment:
Q  243 actgttggaacactagtgtatattgg-aaaaacttga-gtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||   | |||| || | |||||||||||| ||||||||| |||  |||||||||    
T  21641121 actgttggaacactagtgtatattggcaaaaacttgaagtatactagttgttatgtgcagacattggaatgtaaatacaaggatgtagat-ctagtgtaa 21641219  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21641220 agtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 21641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 395 - 529
Target Start/End: Complemental strand, 24885064 - 24884930
Alignment:
Q  395 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgt 494  Q
    ||||||||  ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||      
T  24885064 aaatcctctctataaatagagagctcgggaatggaattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 24884965  T
Q  495 gatttgtgttgacgaatcgttcttttcctcctcct 529  Q
    | |||||||||||||| |||||||||| |||||||    
T  24884964 ggtttgtgttgacgaaccgttcttttcttcctcct 24884930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 21643395 - 21643519
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||  ||||||||||    
T  21643395 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctcgatttgtgtt 21643494  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  21643495 gacgaaccgttcttttcttcctcct 21643519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 21643020 - 21643144
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||  | ||||||||    
T  21643020 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctcggtttgtgtt 21643119  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  21643120 gacgaaccgttcttttcttcctcct 21643144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 21642645 - 21642769
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  || |||||||| ||||||| |||||||||||||||||||||||||  | ||||||||    
T  21642645 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctcggtttgtgtt 21642744  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  21642745 gacgaaccgttcttttcttcctcct 21642769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 21641520 - 21641644
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  || |||||||| ||||||| |||||||||||||||||||||||||  | ||| ||||    
T  21641520 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctcggtttatgtt 21641619  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  21641620 gacgaaccgttcttttcttcctcct 21641644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 21641895 - 21642019
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  || |||||||| ||||||| |||||||||||||||||||||||||  | ||| ||||    
T  21641895 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctcggtttatgtt 21641994  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  21641995 gacgaaccgttcttttcttcctcct 21642019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 21642270 - 21642394
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  || |||||||| ||||||| |||||||||||||||||||||||||  | ||| ||||    
T  21642270 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctccccttctcatctccctcggtttatgtt 21642369  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  21642370 gacgaaccgttcttttcttcctcct 21642394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 21643835 - 21643959
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||||  | ||||||||    
T  21643835 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttcccatctccctcggtttgtgtt 21643934  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    || ||| |||||||||  |||||||    
T  21643935 gatgaaccgttctttttttcctcct 21643959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 43998984 - 43999108
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| |   |||||| |||| |||||||| |||||||| |||||||||| ||||||||||||||||||||||  | ||||||||    
T  43998984 tataaatagagagctcgggatttacattctttactctaaaactgagaatcgaatcctcttctctgattttctccccttctcatctccctcggtttgtgtt 43999083  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  43999084 gacgaaccgttcttttcttcctcct 43999108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 476
Target Start/End: Original strand, 42514182 - 42514245
Alignment:
Q  413 gagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttct 476  Q
    ||||||||||||||   ||||||||||||||||| || |||||||| |||||||||||||||||    
T  42514182 gagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttct 42514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 476 - 529
Target Start/End: Original strand, 17955614 - 17955667
Alignment:
Q  476 tccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcct 529  Q
    |||||||||||||||||  | ||||||||||||||||||||||||| |||||||    
T  17955614 tccccttctcatctccctcggtttgtgttgacgaatcgttcttttcttcctcct 17955667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 268; Significance: 1e-149; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 244 - 538
Target Start/End: Complemental strand, 32115 - 31820
Alignment:
Q  244 ctgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32115 ctgttggaacactattgtatattggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 32016  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32015 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacacca 31916  T
Q  443 aaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31915 aaactgagaatcgaatactcttatctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 31820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 245 - 535
Target Start/End: Complemental strand, 26942 - 26651
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  26942 tgttcgaacactagtgtatattggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacaaaaggatggagaaactagtgtaaagt 26843  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26842 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaa 26743  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttct 535  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26742 aactgagaatcgaatactcttatctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttct 26651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 265; Significance: 1e-147; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 244 - 538
Target Start/End: Original strand, 22697767 - 22698063
Alignment:
Q  244 ctgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    ||||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697767 ctgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 22697866  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697867 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 22697966  T
Q  442 aaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22697967 aaaactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 22698063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 245 - 519
Target Start/End: Original strand, 22702944 - 22703223
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22702944 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 22703043  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703044 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 22703143  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  22703144 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 22703223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 21402258 - 21401979
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21402258 tgttggaacactagtgtataatgaaaaaaacttggagtatagtagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 21402159  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |    
T  21402158 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagcttgggaatagtattcatcactcaa 21402059  T
Q  443 aaactgaaaatcgaatactcttctctggttttctccccttctcatctccc----gtgatttgtgttgacgaatcgttcttt 519  Q
    ||||| | |||||||||||||||| |||||||||| || |||| ||||||    | | |||||||||||||| ||||||||    
T  21402058 aaactaagaatcgaatactcttctttggttttctctcc-tctcttctccctcctgcggtttgtgttgacgaaccgttcttt 21401979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 245 - 417
Target Start/End: Original strand, 29490808 - 29490982
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29490808 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcttttggaatgtaaacacaaggatggagaaactagtgtaaag 29490907  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagag 417  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29490908 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagag 29490982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 2817397 - 2817548
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2817397 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 2817496  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2817497 tgtgaattgaaaatttaatgtcccacattgggtagatcacacactctagtag 2817548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 34142932 - 34142781
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  34142932 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaag 34142833  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34142832 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 34142781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 34155548 - 34155397
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  34155548 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaag 34155449  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34155448 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 34155397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 244 - 394
Target Start/End: Original strand, 6727772 - 6727924
Alignment:
Q  244 ctgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| |||||||||||||||    
T  6727772 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaa 6727871  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6727872 gtgtgaattgaaaattttatgttccacattgggtagatcacacactctagtag 6727924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 244 - 394
Target Start/End: Complemental strand, 34376616 - 34376464
Alignment:
Q  244 ctgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| |||||||||||||||    
T  34376616 ctgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaa 34376517  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  34376516 gtgtgaattgaaaattttatgtcccacattgggtagataacacactctagtag 34376464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 24190650 - 24190802
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||    
T  24190650 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 24190749  T
Q  343 tgtgaattgaaaa-ttttatgtcccacatcgggtagatcacacactctagtag 394  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24190750 tgtgaattgaaaatttttatgtcccacattgggtagatcacacactctagtag 24190802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 31981904 - 31981780
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  | ||||||||    
T  31981904 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctcggtttgtgtt 31981805  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| ||||||||||||||||||    
T  31981804 gacgaaccgttcttttcctcctcct 31981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 31983626 - 31983475
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| ||||| ||||||||||    
T  31983626 tgttggaacactagtgtatattggcaaaaacttggagtatactagtttttatgaggagacattggaatgtaaacacaatgatgtagaaattagtgtaaag 31983527  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  31983526 tgtgaattgaaaattttatgtcccgcattgggtagatcacacactctagtag 31983475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 405 - 528
Target Start/End: Complemental strand, 34376270 - 34376147
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  34376270 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 34376171  T
Q  505 gacgaatcgttcttttcctcctcc 528  Q
    |||||| |||||||||| ||||||    
T  34376170 gacgaaccgttcttttcttcctcc 34376147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 2817901 - 2818025
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| ||||||||||||||   |||||| ||||||||||  | |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  2817901 tataaatagagagctcgggaatgagattctttactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 2818000  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  2818001 gacgaaccgttcttttcttcctcct 2818025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 521
Target Start/End: Original strand, 24191126 - 24191242
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  24191126 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 24191225  T
Q  505 gacgaatcgttcttttc 521  Q
    |||||| |||| |||||    
T  24191226 gacgaaccgtttttttc 24191242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 521
Target Start/End: Original strand, 24192223 - 24192339
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  24192223 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 24192322  T
Q  505 gacgaatcgttcttttc 521  Q
    |||||| |||| |||||    
T  24192323 gacgaaccgtttttttc 24192339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 521
Target Start/End: Complemental strand, 34142418 - 34142314
Alignment:
Q  417 gctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttc 516  Q
    |||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | |||||||||||||| |||||    
T  34142418 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgttgacgaaccgttc 34142319  T
Q  517 ttttc 521  Q
    |||||    
T  34142318 ttttc 34142314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 417 - 521
Target Start/End: Complemental strand, 34155034 - 34154930
Alignment:
Q  417 gctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttc 516  Q
    |||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | |||||||||||||| |||||    
T  34155034 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgttgacgaaccgttc 34154935  T
Q  517 ttttc 521  Q
    |||||    
T  34154934 ttttc 34154930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 467
Target Start/End: Original strand, 6728193 - 6728255
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctc 467  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| | ||||||    
T  6728193 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatccccttctc 6728255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 529
Target Start/End: Original strand, 29491005 - 29491103
Alignment:
Q  434 ttcactccaaaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttttcctcctcct 529  Q
    |||||||||||||||| |||| |||||||||||||| |||| || ||| |||  |  |||||| | |||||||||||||| |||||||||  |||||||    
T  29491005 ttcactccaaaactgagaatcaaatactcttctctgattttatctcctctcttctccctcccgcggtttgtgttgacgaaccgttctttttttcctcct 29491103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 264; Significance: 1e-147; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 244 - 538
Target Start/End: Complemental strand, 40004597 - 40004302
Alignment:
Q  244 ctgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  40004597 ctgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 40004498  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40004497 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 40004398  T
Q  443 aaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40004397 aaactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 40004302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 39999638 - 39999344
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  39999638 tgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagt 39999539  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39999538 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 39999439  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39999438 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 39999344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 54343772 - 54343478
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  54343772 tgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagt 54343673  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54343672 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 54343573  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54343572 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 54343478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 54348926 - 54348632
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  54348926 tgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagt 54348827  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54348826 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 54348727  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  54348726 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 54348632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 36354710 - 36354417
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36354710 tgttggaacactagtgtataatg-aaaaacttggagtatactagtgaatttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagt 36354612  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||||    
T  36354611 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctctttataaattgagagctcagaaatagtattctttactccaa 36354512  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36354511 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 36354417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 245 - 538
Target Start/End: Complemental strand, 36359896 - 36359603
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    ||||||||||||| |||||| || ||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  36359896 tgttggaacactactgtataatg-aaaaacttggagtatactagtgagtttgtggagcctttgaaatgttaacacaaggatggagaaactagtgtaaagt 36359798  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  36359797 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaattctccttataaattgagagctcaggaatagtattctttactccaa 36359698  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  36359697 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttaacgaatcgttcttttcctcctcctctttctgtg 36359603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 245 - 519
Target Start/End: Original strand, 8984983 - 8985262
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8984983 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 8985082  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985083 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 8985182  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  8985183 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 8985262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 13701027 - 13700748
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13701027 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 13700928  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700927 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 13700828  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  13700827 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 13700748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 245 - 519
Target Start/End: Original strand, 21304531 - 21304810
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304531 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 21304630  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304631 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 21304730  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  21304731 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 21304810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 245 - 519
Target Start/End: Original strand, 8979863 - 8980142
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979863 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 8979962  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8979963 tgtgaattgaaaattttatgtcccatatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgagaatagtattcttcactcca 8980062  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  8980063 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 8980142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 245 - 519
Target Start/End: Original strand, 21299411 - 21299690
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21299411 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaag 21299510  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21299511 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactcca 21299610  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  21299611 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 21299690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 54991993 - 54991714
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991993 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 54991894  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  54991893 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgaaagctcgggaatagtattcttcacttca 54991794  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  54991793 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 54991714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 245 - 519
Target Start/End: Original strand, 54990388 - 54990667
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||||||||||| |||||| || ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54990388 tgttggaacactaatgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaag 54990487  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  54990488 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaattctccttataaattgagagctcgggtatagtattcttcactcca 54990587  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| |||| ||||||||||||| |||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  54990588 aaactgagaatcaaatactcttctcttgttttctctcctctctactccctcccgcggtttgtgttgacgaaccgttcttt 54990667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 53798480 - 53798329
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53798480 tgttggaacattagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaagaatggagaaactagtgtaaag 53798381  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  53798380 tgtgaattgaaaattttatgtcctacattgggtagatcacacactctagtag 53798329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 41394009 - 41393858
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | |||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  41394009 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtgaagcctttggaatgtaaacacaaggatggaaaaactagtgtaaag 41393910  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41393909 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 41393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 13695908 - 13695757
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||    
T  13695908 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 13695809  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13695808 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 13695757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 13711521 - 13711370
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||    
T  13711521 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 13711422  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13711421 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 13711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 51018702 - 51018853
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||| |||||||||||||||||| ||||||||| | |||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  51018702 tgttgaaacactagtgtatattggcaaaaacttggaatatactagttgttatgtggagactttggaatgtacacacaaggatgtagaaactagtgtaaag 51018801  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  51018802 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 51018853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 9763269 - 9763420
Alignment:
Q  245 tgttggaacactagtgtatattggaa-aaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  9763269 tgttggaacactagtgtatattggcataaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaag 9763368  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
      |||||||||||||||||||||||||| | |||||||||||||||||||||    
T  9763369 catgaattgaaaattttatgtcccacattgagtagatcacacactctagtag 9763420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 4207192 - 4207042
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||| ||||| |||| ||||||||||||||||    
T  4207192 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaa-cacaatgatgtagaaactagtgtaaag 4207094  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4207093 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4207042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 9763771 - 9763895
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  9763771 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctcccgcggtttgtgtt 9763870  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  9763871 gacgaaccgttcttttcttcctcct 9763895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 13695503 - 13695379
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  | ||||||||    
T  13695503 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctcggtttgtgtt 13695404  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    ||| || | ||||||||||||||||    
T  13695403 gacaaaccattcttttcctcctcct 13695379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 395 - 529
Target Start/End: Original strand, 51019117 - 51019251
Alignment:
Q  395 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgt 494  Q
    ||||||||  ||||||| |||| ||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||      
T  51019117 aaatcctctctataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctc 51019216  T
Q  495 gatttgtgttgacgaatcgttcttttcctcctcct 529  Q
    | |||||||||||||| |||||||||| |||||||    
T  51019217 ggtttgtgttgacgaaccgttcttttcttcctcct 51019251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 53797970 - 53797846
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| ||| ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  53797970 tataaatagagagctcgggattagcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 53797871  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    ||||||  ||||||||| |||||||    
T  53797870 gacgaactgttcttttcttcctcct 53797846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 405 - 528
Target Start/End: Complemental strand, 13711010 - 13710887
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  13711010 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 13710911  T
Q  505 gacgaatcgttcttttcctcctcc 528  Q
    |||||| | |||||||| ||||||    
T  13710910 gacgaaccattcttttcttcctcc 13710887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 47045616 - 47045767
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaactt--gagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||| ||||||||||||||| || | ||  ||||||||||||   | || |||| | || |||||||||||||| ||   ||||||||||||||||    
T  47045616 tgttggaatactagtgtatattggcaacaatttggagtatactagttgttatgaggagacattagaatgtaaacacaatgaaatagaaactagtgtaaag 47045715  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  47045716 tgtgaattgaaaattttatgtcccacattggatagatcacacactctagtag 47045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 41393584 - 41393462
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||  |||||||||   | ||||||||    
T  41393584 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctcccc--ctcatctccatcggtttgtgtt 41393487  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  41393486 gacgaaccgttcttttcttcctcct 41393462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 521
Target Start/End: Original strand, 47046060 - 47046176
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||     |||||||    
T  47046060 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcatcttctctggttttctccccttctcatctccctcaggttgtgtt 47046159  T
Q  505 gacgaatcgttcttttc 521  Q
    |||||| ||||||||||    
T  47046160 gacgaaccgttcttttc 47046176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 263; Significance: 1e-146; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 15767717 - 15768011
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagt 343  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  15767717 tgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagt 15767816  T
Q  344 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15767817 gtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaa 15767916  T
Q  444 aactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15767917 aactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 15768011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 244 - 535
Target Start/End: Original strand, 15762555 - 15762847
Alignment:
Q  244 ctgttggaacactagtgtatattggaaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  15762555 ctgttggaacactagtgtataatgaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaag 15762654  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15762655 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 15762754  T
Q  443 aaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttct 535  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15762755 aaactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttct 15762847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 20090187 - 20090482
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  20090187 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaag 20090286  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20090287 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 20090386  T
Q  443 aaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20090387 aaactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 20090482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 245 - 538
Target Start/End: Original strand, 20095312 - 20095607
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  20095312 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaag 20095411  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20095412 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 20095511  T
Q  443 aaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 538  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20095512 aaactgagaatcgaatactcttctctggttttctccccttctcatctcccgcgatttgtgttgacgaatcgttcttttcctcctcctctttctgtg 20095607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 244 - 519
Target Start/End: Complemental strand, 55129309 - 55129028
Alignment:
Q  244 ctgttggaacactagtgtatattggaaaaa---cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgta 339  Q
    |||| |||||||||||||||| ||||||||   |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  55129309 ctgtcggaacactagtgtataatggaaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaag-atggagaaactagtgta 55129211  T
Q  340 aagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcact 439  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55129210 aagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcact 55129111  T
Q  440 ccaaaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    |||||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  55129110 ccaaaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 55129028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 17369236 - 17368957
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-ctt-gagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||||||||||||| |||| |||||||| ||| || |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369236 tgttggaacactagtatataatggaaaaaacttcgattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 17369137  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369136 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 17369037  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  17369036 aaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 17368957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 3481645 - 3481796
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481645 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 3481744  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3481745 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3481796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 34128405 - 34128558
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa---cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    |||||||||||||||||||| ||||||||   |||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34128405 tgttggaacactagtgtataatggaaaaaaaacttggagtatactagttgatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 34128504  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34128505 agtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 34128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 243 - 394
Target Start/End: Complemental strand, 54271465 - 54271312
Alignment:
Q  243 actgttggaacactagtgtatattgg-aaaaacttga-gtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    ||||||||||||||||| |||||||| |||||||||| ||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| |||    
T  54271465 actgttggaacactagtttatattggcaaaaacttgaagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtctaa 54271366  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  54271365 agtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 54271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 30338096 - 30338247
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30338096 tgttggaacagtagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaattagtgtaaag 30338195  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30338196 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 30338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 30341200 - 30341351
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30341200 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 30341299  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  30341300 tgtgaattgaaaattttatggcccacattaggtagatcacacactctagtag 30341351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 17358716 - 17358566
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||| |||||||||| |||| |||||||| |||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17358716 tgttagaacactagtatataatggaaaaaacttggattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaa-tagtgtaaag 17358618  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17358617 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 17358566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 3476188 - 3476339
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || ||||   ||||||||||||||||| |||| ||||||||||||||||    
T  3476188 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagaaattggaatgtaaacacaatgatgtagaaactagtgtaaag 3476287  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3476288 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3476339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 4116946 - 4117097
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||  | ||||||||||||||||| |||| ||||||||||||||||    
T  4116946 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggaaacattggaatgtaaacacaatgatgaagaaactagtgtaaag 4117045  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4117046 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4117097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 405 - 531
Target Start/End: Original strand, 3482166 - 3482292
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||||  | ||||||||    
T  3482166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctccccttctcatctccctcggtttgtgtt 3482265  T
Q  505 gacgaatcgttcttttcctcctcctct 531  Q
    |||||| |||||||||| |||||||||    
T  3482266 gacgaaccgttcttttcttcctcctct 3482292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 521
Target Start/End: Complemental strand, 17358179 - 17358063
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  17358179 tataaatagagagctcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 17358080  T
Q  505 gacgaatcgttcttttc 521  Q
    |||||| ||||||||||    
T  17358079 gacgaaccgttcttttc 17358063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 521
Target Start/End: Complemental strand, 54270986 - 54270870
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  54270986 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 54270887  T
Q  505 gacgaatcgttcttttc 521  Q
    |||||| ||||||||||    
T  54270886 gacgaaccgttcttttc 54270870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 405 - 521
Target Start/End: Original strand, 4117345 - 4117461
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||  | ||||||||    
T  4117345 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctccccttctcatctccctcggtttgtgtt 4117444  T
Q  505 gacgaatcgttcttttc 521  Q
    |||||| ||||||||||    
T  4117445 gacgaaccgttcttttc 4117461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 405 - 521
Target Start/End: Original strand, 34128923 - 34129039
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| ||||| |||||| | | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  34128923 tataaatagagaggtcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 34129022  T
Q  505 gacgaatcgttcttttc 521  Q
    |||||| ||||||||||    
T  34129023 gacgaaccgttcttttc 34129039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 10321784 - 10321660
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | | ||||||||||||||||| || ||| |||| |||||||| ||||||||||||||||||||||||  | ||||||||    
T  10321784 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaattgaatcctcttctcaggttttctccccttctcatctccctcggtttgtgtt 10321685  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  10321684 gacgaaccgttcttttcttcctcct 10321660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 405 - 528
Target Start/End: Original strand, 3476699 - 3476822
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||   | |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  3476699 tataaatagagagctcgggaatgggattcttcactccaaaaacaagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 3476798  T
Q  505 gacgaatcgttcttttcctcctcc 528  Q
    |||||| | |||||||| ||||||    
T  3476799 gacgaaccattcttttcttcctcc 3476822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 405 - 506
Target Start/End: Original strand, 30338506 - 30338607
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | | ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  30338506 tataaatagagagctcgggatttggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 30338605  T
Q  505 ga 506  Q
    ||    
T  30338606 ga 30338607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 475
Target Start/End: Complemental strand, 10321861 - 10321816
Alignment:
Q  430 attcttcactccaaaactgaaaatcgaatactcttctctggttttc 475  Q
    ||||||||| ||||||| || |||||||| ||||||||||||||||    
T  10321861 attcttcaccccaaaaccgagaatcgaatcctcttctctggttttc 10321816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 243 - 519
Target Start/End: Complemental strand, 17510577 - 17510296
Alignment:
Q  243 actgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    |||||||||||||||||||||| || ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510577 actgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 17510478  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactc 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510477 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactc 17510378  T
Q  441 caaaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  17510377 caaaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 17510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 17505472 - 17505191
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa---cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    |||||||||||||||||||| ||||||||   |||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  17505472 tgttggaacactagtgtataatggaaaaaaaacttggaatatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaactattgtaa 17505373  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactc 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17505372 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactc 17505273  T
Q  441 caaaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  17505272 caaaactgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 17505191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 42024870 - 42024591
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttga-gtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  42024870 tgttggaacactagtgtataatgaaaaaaacttgaagtatactagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaaa 42024771  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42024770 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 42024671  T
Q  443 aaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    ||| ||| ||||||||||||||||||||||||||| ||| |||  |  |||||| | |||||||||||||||||||||||    
T  42024670 aaattgagaatcgaatactcttctctggttttctctcctctcttctccctcccgcggtttgtgttgacgaatcgttcttt 42024591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 245 - 477
Target Start/End: Complemental strand, 42020090 - 42019856
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa-cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  42020090 tgttggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactaatgtaaaa 42019991  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 442  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019990 tgtgaattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcca 42019891  T
Q  443 aaactgaaaatcgaatactcttctctggttttctc 477  Q
    ||||||| |||||||||||||||||||||||||||    
T  42019890 aaactgagaatcgaatactcttctctggttttctc 42019856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 236 - 519
Target Start/End: Complemental strand, 43580188 - 43579898
Alignment:
Q  236 aaaagtgactgttggaacactagtgtatattgga---aaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaa 331  Q
    |||||| | |||||||||||||||||||| ||||   |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580188 aaaagttattgttggaacactagtgtataatggaggaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaa 43580089  T
Q  332 ctagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtat 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43580088 ctagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacatactctagtagaaatcctccttataaattgagagctcgggaatagtat 43579989  T
Q  432 tcttcactccaaaactgaaaatcgaatactcttctctggttttctcccct-tctcat--ctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    | ||||| |||||||||| ||||||||||||||||||| ||||||| ||| |||  |  |||||| | |||||||||||||| ||||||||    
T  43579988 ttttcacaccaaaactgagaatcgaatactcttctctgattttctctcctctcttctccctcccgcggtttgtgttgacgaaccgttcttt 43579898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 245 - 519
Target Start/End: Complemental strand, 41859102 - 41858831
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa--cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    |||||||||||||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  41859102 tgttggaacactagtgtataatggaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaattagtgtaaa 41859003  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 441  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41859002 gtgtgaattgaaaattctatgtcccacatcgggtagatc--acactctagtagaaattctccttataaattgagagctcgggaatagtattcttcactcc 41858905  T
Q  442 aaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgttgacgaatcgttcttt 519  Q
    |||||||| ||||||||||||||||||||||||||   |||||| ||| ||| | |||||||||||||| ||||||||    
T  41858904 aaaactgagaatcgaatactcttctctggttttct---cttctc-tcttccgcggtttgtgttgacgaaccgttcttt 41858831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 245 - 383
Target Start/End: Complemental strand, 41853988 - 41853846
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa---cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    |||||||||||||||||||| ||||||||   |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41853988 tgttggaacactagtgtataatggaaaaaaaacttggagtatactagggagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 41853889  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcaca 383  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  41853888 agtgtgaattgaaaattctatgtcccacatcgggtagatcaca 41853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 24770601 - 24770752
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||    
T  24770601 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 24770700  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24770701 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 24770752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 36254668 - 36254517
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||   | ||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  36254668 tgttgaaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaactagtgtaaag 36254569  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  36254568 tgtgaattgaaaattttatgttccacattgggtagatcacacactctagtag 36254517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 1413068 - 1413220
Alignment:
Q  245 tgttggaacactagtgtatattgg--aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    ||||||||| || |||||||||||  ||||| ||| |||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||||||    
T  1413068 tgttggaaccctggtgtatattgggcaaaaatttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaa 1413167  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  1413168 gtgtgaattgaaaattttatgtcccacattgagtagatcacacactctagtag 1413220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 24776055 - 24776206
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaactt-gagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||   | || |||| | ||||||||||||||||| |||| |||||||||| |||||    
T  24776055 tgttggaacactagtgtatattggcaaaaactttgagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtataaag 24776154  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24776155 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 24776206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 26709839 - 26709688
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg--agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||| ||||||||| |||||||| ||   |||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26709839 tgttggaacattagtgtataatggaaaaaatttgaagtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaag 26709740  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| | |||||| ||||| | ||||||    
T  26709739 tgtgaattgaaaattttatgtcccacattgagtagattacacattgtagtag 26709688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 245 - 394
Target Start/End: Complemental strand, 26979573 - 26979422
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaacttg--agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||| ||||||||| |||||||| ||   |||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  26979573 tgttggaacattagtgtataatggaaaaaatttgaagtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaag 26979474  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| | |||||| ||||| | ||||||    
T  26979473 tgtgaattgaaaattttatgtcccacattgagtagattacacattgtagtag 26979422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 24776563 - 24776687
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||  | ||||||||    
T  24776563 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctcggtttgtgtt 24776662  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| ||||||||||||||||||    
T  24776663 gacgaaccgttcttttcctcctcct 24776687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 1413806 - 1413930
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || |||||||| ||||| |||||||||||||||||||||||||||  | ||||||||    
T  1413806 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctccccttctcatctccctcggtttgtgtt 1413905  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  1413906 gacgaaccgttcttttcttcctcct 1413930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 24771108 - 24771232
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||| ||| | |||||||| ||||||||||  | |||| || ||||||||||||||||||||||||||||||||||  | ||||||||    
T  24771108 tataaatagagagctcaggattggtattctttactccaaaaccaagaatcaaacactcttctctggttttctccccttctcatctccctcggtttgtgtt 24771207  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| ||||||||||||||||||    
T  24771208 gacgaaccgttcttttcctcctcct 24771232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 26709444 - 26709320
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | | |||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||  | ||||||||    
T  26709444 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctccccttctcatctccctcggtttgtgtt 26709345  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    || ||| | |||||||| |||||||    
T  26709344 gatgaaccattcttttcttcctcct 26709320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 26979178 - 26979054
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||| | | |||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||  | ||||||||    
T  26979178 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctccccttctcatctccctcggtttgtgtt 26979079  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    || ||| | |||||||| |||||||    
T  26979078 gatgaaccattcttttcttcctcct 26979054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 529
Target Start/End: Complemental strand, 36254177 - 36254053
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| ||||||| |||||| | ||||||||||||||||| || |||||||| ||||||||| |||||||||| ||||||||||||    ||||||||    
T  36254177 tataaatagagagcttgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctagttttctccctttctcatctccctcagtttgtgtt 36254078  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| |||||||||| |||||||    
T  36254077 gacgaaccgttcttttcttcctcct 36254053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 245 - 477
Target Start/End: Complemental strand, 4081 - 3846
Alignment:
Q  245 tgttggaacactagtgtatattggaaaaa--cttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 341  Q
    |||||||||||||||||||| || |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4081 tgttggaacactagtgtataatgaaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaa 3982  T
Q  342 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3981 gtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactcc 3882  T
Q  442 aaaactgaaaatcgaatactcttctctggttttctc 477  Q
    |||||||| |||||||||||||||||||||||||||    
T  3881 aaaactgagaatcgaatactcttctctggttttctc 3846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 114; Significance: 1e-57; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 243 - 394
Target Start/End: Original strand, 8528 - 8681
Alignment:
Q  243 actgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 340  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||    
T  8528 actgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaa 8627  T
Q  341 agtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8628 agtgtgaatttaaaattttatgtcccacattgggtagatcacacactctagtag 8681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 8962 - 9086
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | ||||||||||||||||  || |||||||| ||||||||| |||||||||||||||||||||||  | ||||||||    
T  8962 tataaatagagagctcgggaatgggattcttcactccaaaaacgagaatcgaatcctcttctctagttttctccccttctcatctccctcggtttgtgtt 9061  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    ||||||  ||||||||| |||||||    
T  9062 gacgaactgttcttttcttcctcct 9086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 96; Significance: 8e-47; HSPs: 4)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 12982 - 13133
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaacttg-agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||    
T  12982 tgttggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaag 13081  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13082 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 13133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 245 - 394
Target Start/End: Original strand, 18439 - 18590
Alignment:
Q  245 tgttggaacactagtgtatattgg-aaaaactt-gagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaag 342  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||   | || |||| | ||||||||||||||||| |||| |||||||||| |||||    
T  18439 tgttggaacactagtgtatattggcaaaaacttagagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtataaag 18538  T
Q  343 tgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18539 tgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 405 - 529
Target Start/End: Original strand, 18946 - 19070
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||  | ||||||||    
T  18946 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctccccttctcatctccctcggtttgtgtt 19045  T
Q  505 gacgaatcgttcttttcctcctcct 529  Q
    |||||| ||||||||||||||||||    
T  19046 gacgaaccgttcttttcctcctcct 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 405 - 528
Target Start/End: Original strand, 13493 - 13616
Alignment:
Q  405 tataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgtgatttgtgtt 504  Q
    ||||||| |||||||||||||| | |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||  | ||||||||    
T  13493 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctccccttctcatctccctcggtttgtgtt 13592  T
Q  505 gacgaatcgttcttttcctcctcc 528  Q
    |||||| | |||||||| ||||||    
T  13593 gacgaaccattcttttcttcctcc 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 395 - 529
Target Start/End: Complemental strand, 37361 - 37227
Alignment:
Q  395 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgaaaatcgaatactcttctctggttttctccccttctcatctcccgt 494  Q
    ||||||||  ||||||| ||||||||||||||   ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| ||      
T  37361 aaatcctctctataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttctccccttctcatcttcctc 37262  T
Q  495 gatttgtgttgacgaatcgttcttttcctcctcct 529  Q
    | |||||||||||||| |||||||||| |||||||    
T  37261 ggtttgtgttgacgaaccgttcttttcttcctcct 37227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 37712 - 37654
Alignment:
Q  336 tgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 394  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37712 tgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactccagtag 37654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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