View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16196_low_21 (Length: 239)
Name: NF16196_low_21
Description: NF16196
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16196_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 29801200 - 29801395
Alignment:
| Q |
19 |
aaaaaggtcttgcactcatccaccaattgttttgtggtcaatattttcccatactttccatcaacttgattttcttgcaacaacaaatctaacaaatctt |
118 |
Q |
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| T |
29801200 |
aaaaaggtcttgcactcatccaccaattgttttgtggtcaatattttcccatactttccatcaacttgattttcttgcaacaacaaatctaacaaatctt |
29801299 |
T |
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| Q |
119 |
ctctaccttgctgtttaacttttgattcctttcgagtttcaattacataaagcaaaagtttatctatctccttcccaagtttctttgtctctaggg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29801300 |
ctctaccttgctgtttaacttttgattcctttcgagtttcaattacataaagcaaaagtttatctatctccttcccaagtttctttgtctctaggg |
29801395 |
T |
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