View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1619_low_16 (Length: 410)
Name: NF1619_low_16
Description: NF1619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1619_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 13 - 392
Target Start/End: Original strand, 37110557 - 37110924
Alignment:
| Q |
13 |
aatatggatacatattcctaattgtaggttccaaattaattaattttatgataatgagggctaattgtagcacgagaatgttaagtaacaatcattatgg |
112 |
Q |
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| T |
37110557 |
aatatggatacatattcctaattgtaggttctaaatta-ttaattttatgataatgagggctaattgtagcacgagaatgttaagtaacaatcattatgg |
37110655 |
T |
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| Q |
113 |
ttgaattttcctttccacgtacctaatgatgagtattacaattcttatcttttgnnnnnnnnactatttatagcttgcttacatttctaagtaatgaatt |
212 |
Q |
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| T |
37110656 |
ttgaattttcctttccacgtacctaatgatgagtattacaattcttatcttttg-attttttactatttatagcttgcttacatttctaagtaatgaatt |
37110754 |
T |
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| Q |
213 |
acccaatgaaaactttaacttcaagcaaattataaaataactgaagacagacattcttcaatatatataccttatcaactcctcagatatttcatcaaga |
312 |
Q |
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|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37110755 |
acccaatgaaaactttaacttcaagc----------ataattgaagacagacattcttcaatatatataccttatcaactcctcagatatttcatcaaga |
37110844 |
T |
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| Q |
313 |
aatcaaactccaaagaagaaactaagaagctaaccatgttttctcctaaattttattccattttcacagtgctaatattc |
392 |
Q |
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| T |
37110845 |
aatcaaactccaaagaagaaactaagaagccaaccatgttttctcctaaattttattccattttcacagtgctaatattc |
37110924 |
T |
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