View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1619_low_28 (Length: 299)
Name: NF1619_low_28
Description: NF1619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1619_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 8 - 269
Target Start/End: Original strand, 37951426 - 37951690
Alignment:
| Q |
8 |
atgaaattgattgagaagacataactccttattagaatctcaattagttcatgaataagtctaccaaaattcacaatcaagtaatgatgt-aaatttatc |
106 |
Q |
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| T |
37951426 |
atgaaattgattgagaagacataactccttattagaatctcaattagttcatgaataagtctaccaaaattcacaatcaagtaatgatgtaaaatttatc |
37951525 |
T |
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| Q |
107 |
aacaaagttgactatagagcaaaattgcaaaagtgaaaatgtaattattcaacgatggggtacaagggaacatttcaactagacaaatggttttcataag |
206 |
Q |
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| T |
37951526 |
aacaaagttgactacagagcaaaattgcaaaagtgaaaatgtaattattcaacgatggggtacaagggaacatttcaactagac-aatggttttcataag |
37951624 |
T |
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| Q |
207 |
---tactaattgattgatggggttaacacttttttgtggtgggcttgggcttatggatattaatta |
269 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
37951625 |
tactactaattgattgatggggttaacacttttttgtggtgggcttgggcttatgaatattaatta |
37951690 |
T |
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