View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16200_low_2 (Length: 288)
Name: NF16200_low_2
Description: NF16200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16200_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 45 - 278
Target Start/End: Original strand, 4960971 - 4961204
Alignment:
| Q |
45 |
atttgactctttgaatgttgctctttgtgcatcaattggattcacacccaatttttcatattcattttacaccactttaaagacttcttgaacgccaaat |
144 |
Q |
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| T |
4960971 |
atttcactctttgaatgttgctctttgtgcatcaattggattcacacccaatttttcatattcattttacacgactttaaagacttcttgaacgccaaat |
4961070 |
T |
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| Q |
145 |
aataccttcatcaaagtactccatcattctcaattgtttccaccaagaaccataagattagatggaaaaatgtcattaaacattcgtaattactttgcaa |
244 |
Q |
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| T |
4961071 |
aataccttcatcaaagtactccatcattctcaattgtttccaccaagaaccataagattagatggaaaaatgtcattaaacattcgtaattactttgcaa |
4961170 |
T |
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| Q |
245 |
gaaactttctaaaatccctcacatttaactgatg |
278 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
4961171 |
gaaactttctaaaatccctcacatttaactgatg |
4961204 |
T |
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