View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16203_low_7 (Length: 357)
Name: NF16203_low_7
Description: NF16203
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16203_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 20 - 341
Target Start/End: Complemental strand, 1802203 - 1801883
Alignment:
| Q |
20 |
tttaaaatcgagctacacaaaaataaaattcagaattagtcattaattccacgtatttaaataacttggaagannnnnnnnnnnnnaggaaacttgaaag |
119 |
Q |
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| T |
1802203 |
tttaaaatcgagctacacaaaaataaaattcaaaactaatcattaattccacgtatttaaataacttggaagatttatttttttt-aggaaacttgaaag |
1802105 |
T |
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| Q |
120 |
annnnnnncaaaaccaaaatacctaactaatatgaaatatgaaccgttcatgtattgaccgcgtgaatgcgtgaaattaggactatggacaatctgaatt |
219 |
Q |
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| T |
1802104 |
atttttttcaaaaccaaaatacctaactaatatgaaatatgaaccgttcatgtactaaccgcgtgaatgcgtgatattagaactatagaccatctgaatt |
1802005 |
T |
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| Q |
220 |
taaacaattgggacaagtggctctattttttgctacaaaaatgttaatagtttttgtacaattcaatcacacatggccctcccaatggcttacttgtcta |
319 |
Q |
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| T |
1802004 |
taaacaattgggacaagtggctctattttttgctacaaaaatgttaatagtttttgtacaattcaatcacacatggccctcccaatggcttacttgtcta |
1801905 |
T |
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| Q |
320 |
tttgagagaccactttcccttt |
341 |
Q |
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| T |
1801904 |
tttgagagaccactttcccttt |
1801883 |
T |
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