View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16205_high_6 (Length: 265)
Name: NF16205_high_6
Description: NF16205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16205_high_6 |
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Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 7558342 - 7558591
Alignment:
| Q |
1 |
agaggaaaattcaactatattactcttaattgtttcaaaataatcaaaatattaaatctataattttgtgaccatagaagtctactatcttaatcttatc |
100 |
Q |
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| T |
7558342 |
agaggaaaattcaactatattactcttaattgtttcaaaataatcaaaatattaaatctataattttgtgaccatagaagtctactatcttaatcttatc |
7558441 |
T |
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| Q |
101 |
gtattttattgagtatgaaataatgtagtatgacatcctagaaactatgactctgtcaataattaatatgcattctagaaagtcatatggctcaatatac |
200 |
Q |
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| T |
7558442 |
gtattttattgagtatgaaataatgtagtatgacatcctagaaactatgaccctgtcaataattaatatgcattctagaaagtcatatgactcaatatac |
7558541 |
T |
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| Q |
201 |
tattgtcattaacgtgttacacatgaaaacgaccatggcccataatttct |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7558542 |
tattgtcattaacgtgttacacatgaaaacgaccatggcccataatttct |
7558591 |
T |
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