View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16207_low_5 (Length: 335)

Name: NF16207_low_5
Description: NF16207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16207_low_5
NF16207_low_5
[»] chr3 (9 HSPs)
chr3 (1-335)||(1425849-1426183)
chr3 (1-335)||(1447939-1448273)
chr3 (155-315)||(1470578-1470737)
chr3 (50-98)||(1470464-1470512)
chr3 (254-310)||(19757715-19757771)
chr3 (257-324)||(46145786-46145853)
chr3 (261-310)||(19736813-19736862)
chr3 (254-310)||(51448288-51448344)
chr3 (254-310)||(52138475-52138531)
[»] chr8 (4 HSPs)
chr8 (253-324)||(41444882-41444953)
chr8 (254-310)||(15215849-15215905)
chr8 (254-310)||(12492421-12492477)
chr8 (254-310)||(36565820-36565876)
[»] chr4 (6 HSPs)
chr4 (254-306)||(10775998-10776050)
chr4 (254-310)||(435876-435932)
chr4 (254-310)||(23906880-23906936)
chr4 (254-310)||(33226856-33226912)
chr4 (254-310)||(39708104-39708160)
chr4 (254-310)||(48174672-48174728)
[»] chr1 (4 HSPs)
chr1 (276-324)||(40419314-40419362)
chr1 (261-335)||(6640748-6640822)
chr1 (254-310)||(8671567-8671623)
chr1 (254-310)||(51601705-51601761)
[»] scaffold0113 (1 HSPs)
scaffold0113 (254-309)||(12177-12232)
[»] chr2 (3 HSPs)
chr2 (254-320)||(11992685-11992751)
chr2 (254-310)||(2610175-2610231)
chr2 (254-310)||(8180427-8180483)
[»] scaffold0570 (1 HSPs)
scaffold0570 (254-310)||(2849-2905)
[»] scaffold0171 (1 HSPs)
scaffold0171 (254-310)||(5839-5895)
[»] chr7 (2 HSPs)
chr7 (254-310)||(32630254-32630310)
chr7 (254-310)||(46356430-46356486)
[»] chr6 (2 HSPs)
chr6 (254-310)||(10100436-10100492)
chr6 (254-310)||(20428215-20428271)
[»] chr5 (4 HSPs)
chr5 (254-310)||(2076053-2076109)
chr5 (254-310)||(3301496-3301552)
chr5 (254-310)||(3394357-3394413)
chr5 (254-310)||(20318638-20318694)


Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 1425849 - 1426183
Alignment:
Q  1 aattctatcccgtctaaacttactataaatcgaacacaacttcctcatatctactatgcttaatttatgtttgtgctgattgtttaccaccaaacatcat 100  Q
    |||||||| |||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  1425849 aattctattccgtctaatcttactatacatccaacacaacgtcctcatatctactatgcttaatttatgtttttgctggttgtttaccaccaaacatcat 1425948  T
Q  101 cagctttattgatgttcgatnnnnnnnttctttcaacatgaacggtactttcgaatcacacaaaacacacgaggcattcgtctagttcaaccacccatcc 200  Q
    ||||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1425949 cagctttattgatgttcgataaaaaaattctttcaacgtgaacggtactttcgaatcacacaaaacacacgaggcattcgtctagttcaaccacccatcc 1426048  T
Q  201 atgggtttgatgatttacatctccttctatttatttgttgtttttcttcataaacccaaaatatttaaaccatacaacttttggtataatatgatctcca 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1426049 atgggtttgatgatttacatctccttctatttatttgttgtttttctttataaacccaaaatatttaaaccatacaacttttggtataatatgatctcca 1426148  T
Q  301 actttcacctttaagttagaaatgtttcatctctt 335  Q
    ||||||||||||||||||||||||||||| |||||    
T  1426149 actttcacctttaagttagaaatgtttcacctctt 1426183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 1447939 - 1448273
Alignment:
Q  1 aattctatcccgtctaaacttactataaatcgaacacaacttcctcatatctactatgcttaatttatgtttgtgctgattgtttaccaccaaacatcat 100  Q
    |||| |||||| ||||  ||||||| | ||| ||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||||||||||||||    
T  1447939 aattttatcccctctagtcttactacacatccaacacaacttcttcatatctattatgcttaatttatgtttgtgttggttgtttaccaccaaacatcat 1448038  T
Q  101 cagctttattgatgttcgatnnnnnnnttctttcaaca--tgaacggtactttcgaatcacacaaaacacacgaggcattcgtctagttcaaccacccat 198  Q
    ||| ||||||||||||||||       || ||||||||  |||   ||||||||| |||||| |||||||||||||||||| || | |||||||||||||    
T  1448039 cagttttattgatgttcgataaaaat-ttatttcaacacgtgagtagtactttcgcatcacataaaacacacgaggcattcctccatttcaaccacccat 1448137  T
Q  199 ccatgggtttgatgatttacatctccttctatttatttgttgtttttcttcataaacccaaaatatttaaaccatacaacttttggtataatatgatctc 298  Q
     || || ||||||||||||||||||||| ||||| |||||||||||||   |||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  1448138 gcaagg-tttgatgatttacatctccttttatttctttgttgtttttcactataaacccaaaatatttaaaccatgcaacttttgatatgatatgatctc 1448236  T
Q  299 caactttcacctttaagttagaaatgtttcatctctt 335  Q
    ||||||| |||| |||| ||||||||||||| |||||    
T  1448237 caacttttacctctaagctagaaatgtttcacctctt 1448273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 315
Target Start/End: Original strand, 1470578 - 1470737
Alignment:
Q  155 atcacacaaaacacacgaggcattcgtctagttcaaccacccatccatgggtttgatgatttacatctccttctatttatttgttgtttttcttcataaa 254  Q
    |||||| |||| |||| || ||||| || | ||| |||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||   |||||    
T  1470578 atcacataaaatacacaagacattcctccatttctaccacccatcta-gggtttgatgatttacatttccttctattcatttgttgtttttcactataaa 1470676  T
Q  255 cccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctttaag 315  Q
    || |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  1470677 ccaaaaatatttaaaccatgcaacttttggtatgatatgatctccaactttcacctctaag 1470737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 1470464 - 1470512
Alignment:
Q  50 tctactatgcttaatttatgtttgtgctgattgtttaccaccaaacatc 98  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||    
T  1470464 tctactatgcttaatttatgtttgtgttggttgcttaccaccaaacatc 1470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 19757771 - 19757715
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| |||||||||||||  |||||  ||||| ||||||||||||||||||||||    
T  19757771 acccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcacct 19757715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 46145853 - 46145786
Alignment:
Q  257 caaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctttaagttagaaatg 324  Q
    ||||||||||||||| || ||||| |||||| | || |||||||||||| |||| ||||||| |||||    
T  46145853 caaaatatttaaaccgtataacttgtggtatgacataatctccaactttaacctctaagttaaaaatg 46145786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 19736862 - 19736813
Alignment:
Q  261 atatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||||||||||  |||||  ||||| ||||||||||||||||||||||    
T  19736862 atatttaaaccatgtaacttggggtatgatatgatctccaactttcacct 19736813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 51448288 - 51448344
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  51448288 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 51448344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 52138531 - 52138475
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  52138531 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 52138475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 324
Target Start/End: Original strand, 41444882 - 41444953
Alignment:
Q  253 aacccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctttaagttagaaatg 324  Q
    ||||||| ||||||||||||   ||||| |||||| |||||||||||| ||||||||| |||||||||||||    
T  41444882 aacccaagatatttaaaccaagtaacttgtggtatgatatgatctccacctttcacctctaagttagaaatg 41444953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 15215849 - 15215905
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||| ||||| ||||||||||||||||||||||    
T  15215849 acccaatatatttaaaccgtgtaactttgggtatgatatgatctccaactttcacct 15215905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 12492421 - 12492477
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  12492421 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 12492477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 36565820 - 36565876
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  36565820 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 36565876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 10775998 - 10776050
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttc 306  Q
    |||||| |||||||||||||  ||||| |||||| ||||||||||||||||||    
T  10775998 acccaagatatttaaaccatgtaacttgtggtatgatatgatctccaactttc 10776050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 435932 - 435876
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  435932 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 435876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 23906880 - 23906936
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  23906880 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 23906936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 33226912 - 33226856
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  33226912 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 33226856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 39708160 - 39708104
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| |||||||||||  | |||||  ||||||||||||||||||| ||||||||    
T  39708160 acccaagatatttaaaccgcataacttgaggtataatatgatctccaaatttcacct 39708104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 48174672 - 48174728
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  48174672 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 48174728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 40419362 - 40419314
Alignment:
Q  276 aacttttggtataatatgatctccaactttcacctttaagttagaaatg 324  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||||||||    
T  40419362 aacttgtggtatgatatgatctccaactttcacctttacgctagaaatg 40419314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 6640822 - 6640748
Alignment:
Q  261 atatttaaaccatacaacttttggtataatatgatctccaactttcacctttaagttagaaatgtttcatctctt 335  Q
    ||||||||||| |  ||||| |||| |||||||||||| ||||||||||| ||   |||||| ||||||||||||    
T  6640822 atatttaaaccgtgtaacttgtggtgtaatatgatctctaactttcacctctacactagaaacgtttcatctctt 6640748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 8671623 - 8671567
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  8671623 acccaagatatttaaaccgtgtaacttagggtatgatatgatctccaactttcacct 8671567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 51601761 - 51601705
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  51601761 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 51601705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 12177 - 12232
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacc 309  Q
    |||||| |||||||||||||  |||||  ||||| |||||||||||||||||||||    
T  12177 acccaagatatttaaaccatgtaacttggggtatgatatgatctccaactttcacc 12232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 320
Target Start/End: Original strand, 11992685 - 11992751
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacctttaagttaga 320  Q
    |||||| ||||||||||| |  |||||  ||||| |||||||||||||||||||||| |||| ||||    
T  11992685 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacctctaaggtaga 11992751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 2610231 - 2610175
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  2610231 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 2610175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 8180483 - 8180427
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||||||||||||||| |  |||||   |||| ||||||||||||||||||||||    
T  8180483 acccaaaatatttaaaccgtgtaacttggagtatgatatgatctccaactttcacct 8180427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 2849 - 2905
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  2849 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 2905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 5895 - 5839
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  5895 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 5839  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 32630310 - 32630254
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  32630310 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 32630254  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 46356430 - 46356486
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  46356430 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 46356486  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 10100436 - 10100492
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  10100436 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 10100492  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 20428215 - 20428271
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| |||||||||||    ||||| |||||| ||||||||||||||||||||||    
T  20428215 acccaatatatttaaaccgcgtaacttgtggtatgatatgatctccaactttcacct 20428271  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000005; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Original strand, 2076053 - 2076109
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  2076053 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 2076109  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 3301552 - 3301496
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  3301552 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 3301496  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 3394413 - 3394357
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  3394413 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 3394357  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 20318694 - 20318638
Alignment:
Q  254 acccaaaatatttaaaccatacaacttttggtataatatgatctccaactttcacct 310  Q
    |||||| ||||||||||| |  |||||  ||||| ||||||||||||||||||||||    
T  20318694 acccaagatatttaaaccgtgtaacttggggtatgatatgatctccaactttcacct 20318638  T

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