View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16207_low_8 (Length: 229)
Name: NF16207_low_8
Description: NF16207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16207_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 49268531 - 49268738
Alignment:
| Q |
1 |
gagttttagtttcggccatgaacataaaattccataattaaacatgtttgatttggaccaattatgggatgaatggtctatgagaagtttttcttataat |
100 |
Q |
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| T |
49268531 |
gagttttagtttcggccatgaacataaaattcaataattaaacatgtttgatttggaccaattatgggatgaatggtctacgagaagtttttcttataat |
49268630 |
T |
|
| Q |
101 |
gtgtaacgggaaaacacattgaaaaaatatattggtaccatagcgcacatcgtctcctagtaagatgtggtgcatgaaggaaccaaatgaggagtagtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
49268631 |
gtgtaacgggaaaacacattgaaaaaatatattggtaccatagcgcacatcgtctcctagtaagatgtcgtgcatgaaggaaccaaatgaggagtagtga |
49268730 |
T |
|
| Q |
201 |
gcatgtag |
208 |
Q |
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|||||||| |
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| T |
49268731 |
gcatgtag |
49268738 |
T |
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