View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16212_low_5 (Length: 252)

Name: NF16212_low_5
Description: NF16212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16212_low_5
NF16212_low_5
[»] chr2 (40 HSPs)
chr2 (13-243)||(25593236-25593473)
chr2 (13-243)||(18533422-18533658)
chr2 (23-134)||(6092646-6092757)
chr2 (31-136)||(23614452-23614558)
chr2 (13-98)||(29112003-29112088)
chr2 (13-67)||(20271173-20271227)
chr2 (18-68)||(22581863-22581913)
chr2 (23-134)||(25132413-25132521)
chr2 (36-130)||(45620322-45620419)
chr2 (18-68)||(24296424-24296474)
chr2 (18-68)||(28972217-28972267)
chr2 (18-68)||(36892633-36892683)
chr2 (18-68)||(40642192-40642242)
chr2 (18-83)||(9654797-9654862)
chr2 (23-68)||(22137681-22137726)
chr2 (18-83)||(23806489-23806554)
chr2 (15-68)||(24868806-24868859)
chr2 (15-84)||(30994845-30994914)
chr2 (19-68)||(32738731-32738780)
chr2 (18-83)||(43644899-43644964)
chr2 (20-68)||(269374-269422)
chr2 (19-83)||(25877888-25877952)
chr2 (17-68)||(19655207-19655258)
chr2 (18-68)||(4450176-4450226)
chr2 (18-83)||(8886379-8886445)
chr2 (21-83)||(23837282-23837344)
chr2 (18-83)||(6877651-6877716)
chr2 (23-68)||(22861741-22861786)
chr2 (18-68)||(5128-5177)
chr2 (18-68)||(460777-460827)
chr2 (18-68)||(720627-720676)
chr2 (18-68)||(7319663-7319713)
chr2 (18-68)||(9782760-9782810)
chr2 (18-68)||(23823356-23823405)
chr2 (18-68)||(23825300-23825349)
chr2 (27-68)||(32115-32156)
chr2 (15-84)||(24272300-24272369)
chr2 (23-68)||(25600119-25600164)
chr2 (90-134)||(24272241-24272284)
chr2 (101-161)||(29111929-29111988)
[»] chr3 (77 HSPs)
chr3 (12-243)||(10902543-10902781)
chr3 (14-219)||(38378130-38378342)
chr3 (13-243)||(40041428-40041666)
chr3 (15-243)||(37918763-37918990)
chr3 (15-243)||(8602369-8602600)
chr3 (13-133)||(25106199-25106316)
chr3 (15-98)||(15988767-15988850)
chr3 (13-112)||(17391201-17391303)
chr3 (15-134)||(41659808-41659925)
chr3 (36-160)||(15551777-15551900)
chr3 (23-133)||(11517321-11517428)
chr3 (36-133)||(6817514-6817610)
chr3 (27-99)||(5230472-5230544)
chr3 (15-77)||(6230512-6230574)
chr3 (15-84)||(17320428-17320497)
chr3 (43-130)||(17760691-17760778)
chr3 (43-130)||(19062011-19062098)
chr3 (13-161)||(14182254-14182413)
chr3 (15-98)||(43429388-43429470)
chr3 (15-77)||(4147546-4147608)
chr3 (18-68)||(6148728-6148778)
chr3 (18-68)||(14296675-14296725)
chr3 (18-68)||(14302302-14302352)
chr3 (18-68)||(15548773-15548823)
chr3 (18-68)||(39654108-39654158)
chr3 (18-83)||(2045524-2045589)
chr3 (19-68)||(11330846-11330895)
chr3 (21-68)||(47786743-47786790)
chr3 (173-243)||(8687932-8688002)
chr3 (173-243)||(9039801-9039871)
chr3 (18-68)||(11199420-11199470)
chr3 (18-68)||(12020188-12020238)
chr3 (18-68)||(12563402-12563452)
chr3 (15-77)||(14819699-14819761)
chr3 (18-68)||(17137644-17137694)
chr3 (18-68)||(17202903-17202953)
chr3 (18-68)||(35121866-35121916)
chr3 (18-68)||(40937888-40937938)
chr3 (23-68)||(4164106-4164151)
chr3 (21-69)||(14968088-14968137)
chr3 (18-83)||(19230248-19230313)
chr3 (18-83)||(19262912-19262977)
chr3 (18-67)||(30204642-30204691)
chr3 (23-68)||(53900472-53900517)
chr3 (19-83)||(8629987-8630051)
chr3 (18-66)||(14523283-14523331)
chr3 (24-68)||(25769479-25769523)
chr3 (15-78)||(11636765-11636828)
chr3 (34-85)||(11822632-11822683)
chr3 (18-68)||(14061115-14061165)
chr3 (18-68)||(22146150-22146200)
chr3 (18-68)||(50113996-50114046)
chr3 (18-83)||(2048253-2048318)
chr3 (18-83)||(10736754-10736819)
chr3 (18-67)||(14287269-14287318)
chr3 (27-68)||(17098858-17098899)
chr3 (22-67)||(17536933-17536978)
chr3 (27-68)||(18008983-18009024)
chr3 (15-68)||(33371220-33371273)
chr3 (19-68)||(45581046-45581095)
chr3 (195-243)||(293964-294012)
chr3 (34-142)||(24901769-24901883)
chr3 (32-134)||(31416123-31416223)
chr3 (18-68)||(11884089-11884138)
chr3 (18-68)||(13815801-13815851)
chr3 (18-68)||(34558132-34558182)
chr3 (17-83)||(55314589-55314655)
chr3 (18-64)||(55443753-55443799)
chr3 (27-68)||(319499-319540)
chr3 (27-68)||(12351722-12351763)
chr3 (90-131)||(14819784-14819824)
chr3 (27-68)||(15515871-15515912)
chr3 (36-69)||(20419020-20419053)
chr3 (15-134)||(21168568-21168685)
chr3 (207-243)||(6817707-6817743)
chr3 (27-83)||(23490699-23490755)
chr3 (34-78)||(30177596-30177640)
[»] chr8 (53 HSPs)
chr8 (13-243)||(11600137-11600374)
chr8 (25-243)||(16000244-16000467)
chr8 (13-243)||(22883851-22884087)
chr8 (38-243)||(22319700-22319911)
chr8 (37-243)||(22311120-22311344)
chr8 (13-133)||(24237224-24237341)
chr8 (13-135)||(23350353-23350471)
chr8 (15-134)||(17500049-17500164)
chr8 (16-131)||(18263267-18263380)
chr8 (13-227)||(11542086-11542295)
chr8 (19-133)||(23118705-23118818)
chr8 (36-134)||(23216850-23216947)
chr8 (36-160)||(45561575-45561710)
chr8 (18-98)||(24906168-24906249)
chr8 (36-160)||(25608072-25608204)
chr8 (39-160)||(19333910-19334042)
chr8 (15-94)||(22499154-22499232)
chr8 (15-136)||(7468496-7468615)
chr8 (18-68)||(20655948-20655998)
chr8 (18-68)||(21695844-21695894)
chr8 (36-133)||(23879148-23879249)
chr8 (18-83)||(29758489-29758554)
chr8 (23-67)||(17283500-17283544)
chr8 (19-83)||(24387599-24387663)
chr8 (17-68)||(23229153-23229204)
chr8 (15-98)||(33170492-33170574)
chr8 (15-77)||(24266252-24266314)
chr8 (18-68)||(25120690-25120740)
chr8 (18-83)||(20479823-20479888)
chr8 (16-85)||(20708040-20708109)
chr8 (18-83)||(43375498-43375563)
chr8 (19-134)||(24554430-24554554)
chr8 (17-68)||(29296141-29296192)
chr8 (17-68)||(37655501-37655552)
chr8 (18-68)||(18769996-18770046)
chr8 (18-68)||(21192587-21192637)
chr8 (18-68)||(21679379-21679428)
chr8 (18-68)||(22323419-22323469)
chr8 (18-68)||(28543096-28543146)
chr8 (18-68)||(38531827-38531877)
chr8 (18-83)||(16204184-16204249)
chr8 (27-68)||(21200022-21200063)
chr8 (23-68)||(37605229-37605274)
chr8 (23-66)||(21233889-21233933)
chr8 (23-66)||(5851767-5851810)
chr8 (17-68)||(23154465-23154516)
chr8 (17-47)||(15931610-15931640)
chr8 (18-68)||(17731392-17731442)
chr8 (18-68)||(23835490-23835540)
chr8 (18-68)||(39448651-39448701)
chr8 (18-68)||(41243893-41243943)
chr8 (207-243)||(17264560-17264596)
chr8 (98-134)||(17264692-17264727)
[»] chr1 (44 HSPs)
chr1 (13-243)||(25092923-25093161)
chr1 (13-243)||(20191813-20192050)
chr1 (38-243)||(78389-78601)
chr1 (23-134)||(21041986-21042095)
chr1 (15-98)||(40438139-40438222)
chr1 (15-134)||(40555569-40555686)
chr1 (13-98)||(20820668-20820753)
chr1 (13-131)||(46143973-46144085)
chr1 (15-76)||(52397918-52397979)
chr1 (23-134)||(5770066-5770175)
chr1 (23-133)||(41213529-41213637)
chr1 (18-67)||(5676540-5676589)
chr1 (18-67)||(22837265-22837314)
chr1 (18-67)||(22837468-22837517)
chr1 (18-67)||(37235816-37235865)
chr1 (20-68)||(35053086-35053134)
chr1 (18-68)||(36358179-36358229)
chr1 (18-68)||(49999205-49999255)
chr1 (23-68)||(9786324-9786369)
chr1 (27-68)||(17607189-17607230)
chr1 (18-83)||(20443936-20444001)
chr1 (18-83)||(20529676-20529741)
chr1 (18-83)||(44036796-44036861)
chr1 (23-83)||(18505577-18505637)
chr1 (23-67)||(27331113-27331157)
chr1 (22-66)||(29217361-29217405)
chr1 (18-68)||(18164439-18164490)
chr1 (18-68)||(51658260-51658311)
chr1 (18-68)||(20956891-20956941)
chr1 (18-68)||(22408167-22408217)
chr1 (15-49)||(33395150-33395184)
chr1 (23-68)||(5472254-5472299)
chr1 (18-83)||(21857683-21857748)
chr1 (23-68)||(35524359-35524404)
chr1 (18-83)||(37846371-37846436)
chr1 (27-83)||(20929677-20929733)
chr1 (42-98)||(33384164-33384220)
chr1 (18-81)||(20895692-20895755)
chr1 (23-66)||(27673055-27673098)
chr1 (17-83)||(18602934-18603000)
chr1 (202-243)||(5472461-5472502)
chr1 (202-243)||(21041856-21041897)
chr1 (15-68)||(21193427-21193479)
chr1 (31-68)||(22148259-22148296)
[»] scaffold0088 (1 HSPs)
scaffold0088 (13-241)||(45454-45688)
[»] chr5 (35 HSPs)
chr5 (19-239)||(16837613-16837840)
chr5 (46-243)||(23412050-23412253)
chr5 (36-243)||(20456445-20456672)
chr5 (13-130)||(11765573-11765690)
chr5 (15-134)||(3420684-3420812)
chr5 (182-243)||(14345718-14345779)
chr5 (15-98)||(19872155-19872237)
chr5 (15-77)||(6454963-6455025)
chr5 (89-160)||(14345604-14345674)
chr5 (18-84)||(24185142-24185208)
chr5 (26-96)||(33628133-33628203)
chr5 (18-68)||(37189971-37190021)
chr5 (18-83)||(4863481-4863546)
chr5 (18-83)||(24470485-24470550)
chr5 (18-68)||(7726864-7726914)
chr5 (18-68)||(11338807-11338857)
chr5 (36-98)||(11963836-11963898)
chr5 (18-68)||(21392377-21392427)
chr5 (18-68)||(23453129-23453179)
chr5 (18-68)||(23460373-23460423)
chr5 (18-68)||(23464634-23464684)
chr5 (18-68)||(28257726-28257776)
chr5 (23-68)||(20710717-20710762)
chr5 (15-68)||(26561639-26561692)
chr5 (18-83)||(27185704-27185769)
chr5 (18-61)||(13793410-13793453)
chr5 (15-66)||(24082383-24082434)
chr5 (23-68)||(21615275-21615320)
chr5 (27-68)||(21661606-21661647)
chr5 (36-90)||(14345539-14345593)
chr5 (17-83)||(20614824-20614890)
chr5 (15-134)||(5623281-5623398)
chr5 (23-68)||(19403760-19403804)
chr5 (15-68)||(23236260-23236313)
chr5 (90-134)||(23236345-23236388)
[»] chr4 (45 HSPs)
chr4 (23-231)||(12732271-12732486)
chr4 (36-243)||(5373001-5373226)
chr4 (13-243)||(12136147-12136393)
chr4 (13-134)||(54365934-54366055)
chr4 (15-134)||(50224017-50224135)
chr4 (13-130)||(19623896-19624011)
chr4 (13-98)||(17378045-17378130)
chr4 (40-160)||(15216125-15216245)
chr4 (13-101)||(17213722-17213810)
chr4 (13-89)||(24237135-24237211)
chr4 (23-98)||(41919105-41919180)
chr4 (15-134)||(47470192-47470312)
chr4 (15-68)||(38763041-38763094)
chr4 (18-83)||(44054098-44054163)
chr4 (18-83)||(109678-109743)
chr4 (19-84)||(7966457-7966522)
chr4 (17-68)||(7187786-7187837)
chr4 (17-84)||(42706954-42707021)
chr4 (18-68)||(12901636-12901686)
chr4 (15-98)||(13595882-13595961)
chr4 (18-68)||(13752164-13752214)
chr4 (18-68)||(18496339-18496389)
chr4 (18-68)||(20813895-20813945)
chr4 (18-68)||(30236416-30236466)
chr4 (15-68)||(5407413-5407466)
chr4 (18-83)||(53909755-53909820)
chr4 (36-130)||(14569601-14569698)
chr4 (13-243)||(19082807-19083049)
chr4 (18-68)||(12838197-12838247)
chr4 (18-68)||(34198030-34198080)
chr4 (15-68)||(10239292-10239345)
chr4 (18-67)||(12246098-12246147)
chr4 (15-84)||(19557585-19557653)
chr4 (27-68)||(21961454-21961495)
chr4 (27-68)||(41167783-41167824)
chr4 (19-83)||(8874352-8874416)
chr4 (20-67)||(18275077-18275124)
chr4 (192-243)||(19624092-19624142)
chr4 (24-83)||(53706837-53706896)
chr4 (18-68)||(15853145-15853195)
chr4 (18-68)||(37958903-37958953)
chr4 (18-68)||(54120200-54120250)
chr4 (18-83)||(13244536-13244601)
chr4 (18-83)||(16366629-16366694)
chr4 (23-64)||(41258210-41258251)
[»] scaffold0561 (1 HSPs)
scaffold0561 (25-239)||(4627-4847)
[»] scaffold0115 (1 HSPs)
scaffold0115 (27-243)||(19404-19626)
[»] chr7 (62 HSPs)
chr7 (46-239)||(18081206-18081405)
chr7 (15-98)||(13460567-13460650)
chr7 (36-204)||(28718147-28718321)
chr7 (15-134)||(9322919-9323037)
chr7 (13-117)||(19065450-19065557)
chr7 (24-116)||(16370226-16370322)
chr7 (18-130)||(18920958-18921068)
chr7 (13-98)||(39293998-39294083)
chr7 (176-243)||(17923050-17923117)
chr7 (36-160)||(4072872-4072998)
chr7 (182-243)||(39294201-39294262)
chr7 (23-98)||(13452425-13452500)
chr7 (13-136)||(15980372-15980507)
chr7 (18-83)||(3054912-3054977)
chr7 (15-84)||(20587496-20587565)
chr7 (13-85)||(3193892-3193963)
chr7 (15-134)||(4482462-4482590)
chr7 (18-66)||(12753119-12753167)
chr7 (17-68)||(5617721-5617772)
chr7 (18-68)||(16915915-16915965)
chr7 (18-68)||(49049728-49049778)
chr7 (18-83)||(11582845-11582910)
chr7 (15-68)||(28388706-28388759)
chr7 (176-243)||(17926887-17926954)
chr7 (15-98)||(9641284-9641363)
chr7 (18-68)||(15628949-15628999)
chr7 (18-68)||(16572058-16572108)
chr7 (18-68)||(16593554-16593604)
chr7 (23-68)||(141815-141860)
chr7 (19-68)||(34243001-34243050)
chr7 (13-80)||(12182473-12182541)
chr7 (17-68)||(9609508-9609559)
chr7 (17-68)||(9837080-9837131)
chr7 (18-68)||(13388251-13388302)
chr7 (18-68)||(12249948-12249998)
chr7 (18-68)||(15824376-15824426)
chr7 (18-68)||(15914277-15914326)
chr7 (18-68)||(17229965-17230015)
chr7 (36-98)||(21677395-21677456)
chr7 (18-68)||(45455586-45455636)
chr7 (18-83)||(122700-122765)
chr7 (18-83)||(1938634-1938699)
chr7 (18-83)||(13039119-13039184)
chr7 (27-68)||(14938975-14939016)
chr7 (27-68)||(15366568-15366609)
chr7 (23-68)||(31499506-31499551)
chr7 (182-243)||(12245755-12245818)
chr7 (36-84)||(15305677-15305725)
chr7 (195-243)||(16370404-16370452)
chr7 (17-68)||(48345852-48345903)
chr7 (18-68)||(3893326-3893376)
chr7 (34-162)||(16206196-16206326)
chr7 (18-68)||(26072136-26072186)
chr7 (18-68)||(26095923-26095973)
chr7 (18-68)||(32496456-32496506)
chr7 (18-68)||(44863388-44863438)
chr7 (31-68)||(9058492-9058529)
chr7 (37-86)||(12245924-12245973)
chr7 (36-93)||(14278776-14278833)
chr7 (18-47)||(16917835-16917864)
chr7 (195-243)||(4073050-4073098)
chr7 (100-136)||(13460517-13460553)
[»] scaffold0017 (1 HSPs)
scaffold0017 (37-243)||(10349-10560)
[»] scaffold0009 (3 HSPs)
scaffold0009 (13-243)||(98815-99050)
scaffold0009 (13-130)||(256649-256768)
scaffold0009 (18-68)||(236357-236407)
[»] scaffold0047 (2 HSPs)
scaffold0047 (49-243)||(73195-73393)
scaffold0047 (17-68)||(1976-2027)
[»] scaffold0331 (1 HSPs)
scaffold0331 (21-242)||(11418-11633)
[»] scaffold0216 (1 HSPs)
scaffold0216 (15-243)||(22991-23218)
[»] scaffold0073 (3 HSPs)
scaffold0073 (13-128)||(55642-55757)
scaffold0073 (127-243)||(49557-49680)
scaffold0073 (127-243)||(54088-54211)
[»] scaffold0725 (1 HSPs)
scaffold0725 (27-243)||(7150-7365)
[»] scaffold0601 (1 HSPs)
scaffold0601 (89-243)||(3324-3484)
[»] chr6 (43 HSPs)
chr6 (16-111)||(23219195-23219288)
chr6 (13-98)||(16131500-16131585)
chr6 (13-98)||(17375577-17375661)
chr6 (13-85)||(17858240-17858312)
chr6 (18-98)||(21929680-21929760)
chr6 (13-84)||(4174571-4174643)
chr6 (15-98)||(22595511-22595593)
chr6 (15-98)||(29162764-29162846)
chr6 (13-84)||(4230200-4230272)
chr6 (22-98)||(34965173-34965249)
chr6 (17-68)||(6092787-6092838)
chr6 (18-85)||(16889662-16889729)
chr6 (18-84)||(25917910-25917976)
chr6 (15-68)||(33540087-33540140)
chr6 (15-134)||(15006503-15006620)
chr6 (17-68)||(940982-941033)
chr6 (17-68)||(14150840-14150891)
chr6 (17-68)||(17085412-17085463)
chr6 (15-98)||(22467957-22468039)
chr6 (18-68)||(7829769-7829819)
chr6 (18-68)||(21621371-21621421)
chr6 (18-83)||(17787676-17787741)
chr6 (15-68)||(19852531-19852584)
chr6 (18-83)||(19985101-19985166)
chr6 (18-83)||(25746165-25746230)
chr6 (18-85)||(12310862-12310929)
chr6 (17-68)||(25649517-25649568)
chr6 (25-83)||(18740575-18740633)
chr6 (18-68)||(32896227-32896277)
chr6 (23-68)||(15080708-15080753)
chr6 (23-68)||(22428419-22428464)
chr6 (15-68)||(22846386-22846439)
chr6 (18-66)||(25646791-25646839)
chr6 (20-83)||(23151636-23151699)
chr6 (18-68)||(16104795-16104845)
chr6 (18-68)||(18383529-18383579)
chr6 (18-68)||(22866353-22866403)
chr6 (15-77)||(31469393-31469455)
chr6 (37-78)||(14487456-14487497)
chr6 (27-84)||(18775436-18775493)
chr6 (23-64)||(33322990-33323031)
chr6 (23-83)||(13016711-13016771)
chr6 (98-134)||(22595605-22595640)
[»] scaffold0032 (3 HSPs)
scaffold0032 (27-116)||(121841-121928)
scaffold0032 (18-83)||(53861-53926)
scaffold0032 (17-68)||(106470-106521)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-89)||(37042-37118)
[»] scaffold0385 (1 HSPs)
scaffold0385 (167-243)||(12497-12573)
[»] scaffold0174 (2 HSPs)
scaffold0174 (13-89)||(22431-22507)
scaffold0174 (15-66)||(844-895)
[»] scaffold0004 (2 HSPs)
scaffold0004 (15-134)||(84614-84731)
scaffold0004 (18-68)||(25822-25872)
[»] scaffold0057 (1 HSPs)
scaffold0057 (15-98)||(4179-4263)
[»] scaffold0442 (1 HSPs)
scaffold0442 (23-134)||(1838-1947)
[»] scaffold0112 (1 HSPs)
scaffold0112 (34-161)||(11982-12113)
[»] scaffold0468 (1 HSPs)
scaffold0468 (13-96)||(13240-13323)
[»] scaffold0022 (4 HSPs)
scaffold0022 (20-84)||(114157-114221)
scaffold0022 (18-68)||(107854-107904)
scaffold0022 (24-68)||(130147-130191)
scaffold0022 (18-68)||(106760-106810)
[»] scaffold0503 (1 HSPs)
scaffold0503 (17-68)||(9629-9680)
[»] scaffold0357 (1 HSPs)
scaffold0357 (18-77)||(5986-6045)
[»] scaffold0396 (1 HSPs)
scaffold0396 (18-68)||(14159-14209)
[»] scaffold0240 (1 HSPs)
scaffold0240 (18-68)||(5790-5840)
[»] scaffold0138 (2 HSPs)
scaffold0138 (19-77)||(18887-18945)
scaffold0138 (21-68)||(24288-24335)
[»] scaffold0692 (1 HSPs)
scaffold0692 (18-83)||(1312-1377)
[»] scaffold0387 (1 HSPs)
scaffold0387 (15-131)||(2889-3003)
[»] scaffold0031 (3 HSPs)
scaffold0031 (19-68)||(99051-99100)
scaffold0031 (18-68)||(30259-30309)
scaffold0031 (18-68)||(68539-68589)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-83)||(249399-249464)
[»] scaffold0231 (1 HSPs)
scaffold0231 (13-80)||(15722-15790)
[»] scaffold1068 (1 HSPs)
scaffold1068 (17-68)||(1514-1565)
[»] scaffold0434 (1 HSPs)
scaffold0434 (18-85)||(2835-2902)
[»] scaffold0151 (1 HSPs)
scaffold0151 (21-84)||(31508-31571)
[»] scaffold0507 (1 HSPs)
scaffold0507 (18-68)||(5260-5310)
[»] scaffold0327 (2 HSPs)
scaffold0327 (19-77)||(6747-6805)
scaffold0327 (23-66)||(4274-4317)
[»] scaffold0234 (1 HSPs)
scaffold0234 (21-83)||(19497-19559)
[»] scaffold0190 (1 HSPs)
scaffold0190 (18-84)||(8316-8382)
[»] scaffold0133 (1 HSPs)
scaffold0133 (18-68)||(3564-3614)
[»] scaffold0121 (1 HSPs)
scaffold0121 (18-68)||(7244-7294)
[»] scaffold0107 (1 HSPs)
scaffold0107 (17-67)||(11703-11753)
[»] scaffold0068 (1 HSPs)
scaffold0068 (18-68)||(59810-59860)
[»] scaffold0025 (1 HSPs)
scaffold0025 (18-68)||(51577-51627)
[»] scaffold0786 (1 HSPs)
scaffold0786 (23-68)||(5009-5054)
[»] scaffold0700 (1 HSPs)
scaffold0700 (23-68)||(854-899)
[»] scaffold0338 (1 HSPs)
scaffold0338 (23-68)||(6927-6972)
[»] scaffold0219 (1 HSPs)
scaffold0219 (23-68)||(25830-25875)
[»] scaffold0046 (1 HSPs)
scaffold0046 (18-83)||(21297-21362)
[»] scaffold0021 (4 HSPs)
scaffold0021 (18-67)||(138678-138727)
scaffold0021 (15-67)||(19668-19720)
scaffold0021 (15-67)||(29244-29296)
scaffold0021 (18-68)||(9821-9871)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-68)||(104222-104275)
[»] scaffold0003 (2 HSPs)
scaffold0003 (15-84)||(99378-99447)
scaffold0003 (18-83)||(217640-217705)
[»] scaffold0613 (1 HSPs)
scaffold0613 (34-78)||(2961-3005)
[»] scaffold0218 (1 HSPs)
scaffold0218 (23-83)||(7124-7184)
[»] scaffold0005 (1 HSPs)
scaffold0005 (36-130)||(247678-247775)
[»] scaffold0456 (1 HSPs)
scaffold0456 (17-68)||(12508-12559)
[»] scaffold0409 (2 HSPs)
scaffold0409 (17-68)||(2938-2989)
scaffold0409 (17-68)||(11193-11244)
[»] scaffold0390 (1 HSPs)
scaffold0390 (25-68)||(3542-3585)
[»] scaffold0028 (1 HSPs)
scaffold0028 (17-68)||(70161-70212)
[»] scaffold0010 (1 HSPs)
scaffold0010 (17-68)||(29369-29420)
[»] scaffold0589 (1 HSPs)
scaffold0589 (18-68)||(6047-6097)
[»] scaffold0462 (1 HSPs)
scaffold0462 (24-66)||(4373-4415)
[»] scaffold0120 (1 HSPs)
scaffold0120 (18-68)||(26818-26868)
[»] scaffold0102 (1 HSPs)
scaffold0102 (18-68)||(37705-37755)
[»] scaffold0035 (1 HSPs)
scaffold0035 (34-117)||(64372-64462)
[»] scaffold0023 (1 HSPs)
scaffold0023 (18-68)||(92197-92247)
[»] scaffold1610 (1 HSPs)
scaffold1610 (18-83)||(119-184)
[»] scaffold1605 (1 HSPs)
scaffold1605 (18-83)||(1395-1460)
[»] scaffold0521 (1 HSPs)
scaffold0521 (27-68)||(6837-6878)
[»] scaffold0480 (1 HSPs)
scaffold0480 (18-83)||(7292-7357)
[»] scaffold0148 (1 HSPs)
scaffold0148 (15-84)||(36148-36217)
[»] scaffold0106 (1 HSPs)
scaffold0106 (18-83)||(37557-37622)
[»] scaffold0092 (1 HSPs)
scaffold0092 (23-68)||(1598-1643)
[»] scaffold0014 (1 HSPs)
scaffold0014 (23-68)||(144933-144978)
[»] scaffold0011 (4 HSPs)
scaffold0011 (18-83)||(125303-125368)
scaffold0011 (18-67)||(72322-72371)
scaffold0011 (18-67)||(76703-76752)
scaffold0011 (18-83)||(256832-256897)
[»] scaffold0008 (1 HSPs)
scaffold0008 (18-63)||(20810-20855)
[»] scaffold0195 (1 HSPs)
scaffold0195 (27-83)||(17457-17513)
[»] scaffold0083 (1 HSPs)
scaffold0083 (23-67)||(12435-12479)
[»] scaffold0808 (2 HSPs)
scaffold0808 (36-86)||(5577-5627)
scaffold0808 (18-67)||(3400-3448)
[»] scaffold0450 (1 HSPs)
scaffold0450 (18-68)||(4730-4780)
[»] scaffold0359 (1 HSPs)
scaffold0359 (18-64)||(13745-13791)
[»] scaffold0165 (1 HSPs)
scaffold0165 (22-68)||(20387-20433)
[»] scaffold0132 (1 HSPs)
scaffold0132 (18-68)||(40924-40974)
[»] scaffold0095 (1 HSPs)
scaffold0095 (18-68)||(7494-7544)
[»] scaffold0037 (2 HSPs)
scaffold0037 (18-68)||(26665-26715)
scaffold0037 (27-68)||(66605-66646)
[»] scaffold0013 (1 HSPs)
scaffold0013 (18-68)||(33742-33792)
[»] scaffold0342 (1 HSPs)
scaffold0342 (23-68)||(4024-4069)
[»] scaffold0205 (1 HSPs)
scaffold0205 (195-236)||(4544-4585)
[»] scaffold0175 (1 HSPs)
scaffold0175 (27-68)||(7054-7095)
[»] scaffold0006 (1 HSPs)
scaffold0006 (23-68)||(199233-199278)
[»] scaffold0001 (1 HSPs)
scaffold0001 (31-84)||(141148-141201)
[»] scaffold0258 (1 HSPs)
scaffold0258 (195-243)||(8331-8379)
[»] scaffold0044 (1 HSPs)
scaffold0044 (36-68)||(94206-94238)


Alignment Details
Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 25593473 - 25593236
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||    
T  25593473 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggagtgtaggagtagtttgcttttggtgagtgcttggatagcagg 25593374  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||    
T  25593373 agctaatctctgttatcgtttcttggagtcctagatttaggctctgattaggacattggtctttatgtctttgttggatttatttattattgagatttta 25593274  T
Q  206 tccatatgtcgggacttggagaatttatatgatgatgt 243  Q
     | ||||||||||||||||||||||||| |||||||||    
T  25593273 cctatatgtcgggacttggagaatttatgtgatgatgt 25593236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 18533658 - 18533422
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||| |||||||||||||||    
T  18533658 tgaagcttacccccagtggttttaaccgcctacctgtttgtatgaatgggtagacagagtgcaggagtattttgcttttggtgattgcttggatagcggg 18533559  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
    || ||||||||||||||| ||||||||||| |||| ||||||||||||       ||||| |||||||||| |||  |||||||||||||||||||||||    
T  18533558 agttaatctccgttatcggttcttggagtcttaga-ttaggctctgattagaacgttggtatttatgtcttcgttgaatttatttattattgagatttta 18533460  T
Q  206 tccatatgtcgggacttggagaatttatatgatgatgt 243  Q
     |||||||| |||||||| |||||||||||||||||||    
T  18533459 cccatatgttgggacttgaagaatttatatgatgatgt 18533422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 6092757 - 6092646
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatct 121  Q
    ||||| |||||||||||||||| |||| | |||| ||||||||||| | |||| || |||||||||||||||||| ||||||||||||||||||| ||||    
T  6092757 ccccattggttttgaccgcctatctgtctatatggatgggtagacgaagtgcatgattagtttgcttttggtgagttgcttggatagcgggagct-atct 6092659  T
Q  122 ccgttatcgtttc 134  Q
    |||||||||||||    
T  6092658 ccgttatcgtttc 6092646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 136
Target Start/End: Original strand, 23614452 - 23614558
Alignment:
Q  31 gttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatctccgttatc 129  Q
    ||||||||||||||||| |||||||||||||||||||| | |||| || ||||||||||  |||||| ||||||||||||||||||||||||| |||| |    
T  23614452 gttttgaccgcctacctttttgtatgaatgggtagacgaagtgcatgattagtttgcttccggtgagttgcttggatagcgggagctaatctctgttacc 23614551  T
Q  130 gtttctt 136  Q
    | |||||    
T  23614552 gattctt 23614558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 29112088 - 29112003
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| | |||| || ||||||||||| |||||||    
T  29112088 tgaagcttacccccagtggttttgacagcctgcctgtttgtatgaatgcgtagacgaagtgcatgattagtttgctttcggtgagt 29112003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 20271227 - 20271173
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  20271227 tgaagcttacccccagtggttttgaccgcctacttgttggtatgaataggtagac 20271173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 22581863 - 22581913
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  22581863 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 22581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 25132521 - 25132413
Alignment:
Q  23 ccccagtggtttt-gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatct 121  Q
    ||||||||||||| || ||||||||||| |||||| | ||||||||| | ||||||| |||||     ||||||| ||||||||||||||||||| ||||    
T  25132521 ccccagtggtttttgatcgcctacctgtctgtatggaagggtagacgaagtgcaggattagttac---ttggtgattgcttggatagcgggagct-atct 25132426  T
Q  122 ccgttatcgtttc 134  Q
    |||||||||||||    
T  25132425 ccgttatcgtttc 25132413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 45620322 - 45620419
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt--ttgctt--ttggtgagtgcttggatagcgggagctaatctccgttatcg 130  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||  ||| ||  |||| |||||||  ||||||||||||| |||||||||||||    
T  45620322 gaccgcctacctatttgtatgaatgggtagacggtgtgcaggagtagttgttgattgcttggggagtgctcagatagcgggagct-atctccgttatcg 45620419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 24296424 - 24296474
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  24296424 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 24296474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 28972267 - 28972217
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  28972267 cttacccccagtgattttgaccgcctacctgtctgtatggatgggtagacg 28972217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 36892633 - 36892683
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||||||    
T  36892633 cttacccgcagtggttttgaccgcctacctgtctgtatggatgggtagacg 36892683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 40642192 - 40642242
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  40642192 cttacccccagtggttttttccgcctacctgtttgtatggatgggtagacg 40642242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 9654797 - 9654862
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||| |||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  9654797 cttacccccagtgattttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 9654862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 22137681 - 22137726
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  22137681 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 22137726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 23806489 - 23806554
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||| ||||||| |||||| |||||||||||   ||||||||||||    
T  23806489 cttacccccagtggttttaaccgcatacctgtctgtatggatgggtagacgttgtgcaggagtagt 23806554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 24868859 - 24868806
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| | ||||||||||||||||||||||| |||||| |||||||||||    
T  24868859 aagcttacctctagtggttttgaccgcctacctgtctgtatggatgggtagacg 24868806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 30994845 - 30994914
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||| ||||||||||||||||||||||||||  |||||| |||| |||||| | ||||||| |||||    
T  30994845 aagcttagccccagtggttttgaccgcctacctgactgtatggatggatagacgaagtgcaggattagtt 30994914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 32738780 - 32738731
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  32738780 ttaccccctgtggttttgaccgcctacctgtctgtatggatgggtagacg 32738731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 43644899 - 43644964
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| |||| |||||||| |||||| |||||||||||   ||||||||||||    
T  43644899 cttacccccagtggttttaaccgtctacctgtctgtatggatgggtagacgttgtgcaggagtagt 43644964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 269422 - 269374
Alignment:
Q  20 tacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  269422 tacccccaatggttttgaccgcctacctgtctgtatggatgggtagacg 269374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 25877888 - 25877952
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  25877888 ttacccccaatggtttttaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 25877952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 19655258 - 19655207
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| ||||||||| ||||||||||| |||||| |||||||||||    
T  19655258 gcttacccccaatggttttgatcgcctacctgtctgtatggatgggtagacg 19655207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 4450176 - 4450226
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||| | ||||||||||||||||||||||| |||||| |||||||||||    
T  4450176 cttacctctagtggttttgaccgcctacctgtctgtatggatgggtagacg 4450226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 8886445 - 8886379
Alignment:
Q  18 cttacccccagtggttttga-ccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| | |||||||||||| |||||| |||||||||||   ||||||||||||    
T  8886445 cttacccccagtggttttaaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 8886379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 23837282 - 23837344
Alignment:
Q  21 acccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||||| ||||||| ||||| |||||| |||||||||||   ||||||||||||    
T  23837282 acccccagtggttttaaccgcctgcctgtctgtatggatgggtagacgttgtgcaggagtagt 23837344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 6877716 - 6877651
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||| ||| ||||||| |||||||| |||||| |||||||||||   ||||||||||||    
T  6877716 cttacccccagaggtgttgaccgtctacctgtctgtatggatgggtagacgttgtgcaggagtagt 6877651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 22861786 - 22861741
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||    
T  22861786 ccccagtggttttaaccgcctacctgtctgtatggatgggtagacg 22861741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5128 - 5177
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||||  |||||| |||||||||||    
T  5128 cttacccccagtggttttgaccg-ctacctgcctgtatggatgggtagacg 5177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 460827 - 460777
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||| ||||| |||||||| |||| |||||| |||||||||||    
T  460827 cttacccccagttgttttaaccgcctatctgtctgtatggatgggtagacg 460777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 720676 - 720627
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||| |||| ||||||||| |||||| |||||||||||    
T  720676 cttacccccagtggttt-gacctcctacctgtctgtatggatgggtagacg 720627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 7319713 - 7319663
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| ||||| |||||||||||||||| | |||||| |||||||||||    
T  7319713 cttaccctcagtgattttgaccgcctacctatctgtatggatgggtagacg 7319663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 9782760 - 9782810
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||| ||||||||||||||| ||||| |||||| || ||||||||    
T  9782760 cttacccccactggttttgaccgcctgcctgtctgtatggataggtagacg 9782810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 23823356 - 23823405
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||| ||||||| ||| |||||| |||||||||||    
T  23823356 cttacccccagtggttttga-cgcctacttgtctgtatggatgggtagacg 23823405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 23825300 - 23825349
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||| ||||||| ||| |||||| |||||||||||    
T  23825300 cttacccccagtggttttga-cgcctacttgtctgtatggatgggtagacg 23825349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 32115 - 32156
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||| |||||||| |||||| |||||||||||    
T  32115 agtggttttgaccgtctacctgtctgtatggatgggtagacg 32156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 24272369 - 24272300
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||||||| | |||||||||| |||||| ||| |||||  ||||||||||| | ||||||| |||||    
T  24272369 aagcttacccctaatggttttgactgcctacttgtctgtattgatgggtagacgaagtgcaggattagtt 24272300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 25600164 - 25600119
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||| |||||||||| | |||||| |||||||||||    
T  25600164 ccccagtggttttggccgcctacctatctgtatggatgggtagacg 25600119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 24272284 - 24272241
Alignment:
Q  90 ttggtgagtgcttggatagcgggagctaatctccgttatcgtttc 134  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||    
T  24272284 ttggtgattgcttggatagcgggtgct-atctccgttatcgtttc 24272241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 29111988 - 29111929
Alignment:
Q  101 ttggatagcgggagctaatctccgttatcgtttcttggagtcctagatttaggctctgatt 161  Q
    ||||||||| |||||||||||||||||||| || || || || |||| |||||||||||||    
T  29111988 ttggatagctggagctaatctccgttatcggtttttagaatcttaga-ttaggctctgatt 29111929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 2e-95; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 10902781 - 10902543
Alignment:
Q  12 atgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgg 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10902781 atgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgg 10902682  T
Q  112 gagctaatctccgttatcgtttcttggagtcctagatttaggctctga-------tttggtctttatgtctttgttagatttatttattattgagatttt 204  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||| |        ||| |||||||||||||||| |||||||||||||||||||||||    
T  10902681 gagctaatctccgttatcgtttcttgaagtcttagatttagactctaactgggacgttgatctttatgtctttgttggatttatttattattgagatttt 10902582  T
Q  205 atccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    | ||||||||||||| |||||||||||||||||||||||    
T  10902581 acccatatgtcgggatttggagaatttatatgatgatgt 10902543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 38378130 - 38378342
Alignment:
Q  14 gaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggga 113  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  38378130 gaagcttatccccagtggttttgaccgcctacccgtttgtatgaatgagtagacggagtgcaggagtggttagcttttggtgagtgcttggatagcggga 38378229  T
Q  114 gctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttat 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||     
T  38378230 gctaatctccgttatcgtttcttggagtcctagatttaggctctgattaggacgttggtctttatgtctttgttggatttatttattattgagattttac 38378329  T
Q  207 ccatatgtcggga 219  Q
    |||||||||||||    
T  38378330 ccatatgtcggga 38378342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 40041428 - 40041666
Alignment:
Q  13 tgaagcttacccc-cagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgg 111  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||||| |    
T  40041428 tgaagcttaccccccagtggttttgagcgcctacttgtttgtatgaatgggtagaccgagtgcaggagtagtttgtttttggtgagtgcttgaatagcag 40041527  T
Q  112 gagctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttt 204  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||       ||||||||| |||||||||| |||||||||||||||||||||||    
T  40041528 gagctaatcttcgttatcgtttcttggagtcctagatttatgctctgattaggacgttggtctttttgtctttgttggatttatttattattgagatttt 40041627  T
Q  205 atccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    || |||||||| ||||||||||||||||| |||| ||||    
T  40041628 attcatatgtcaggacttggagaatttatgtgataatgt 40041666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 37918763 - 37918990
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagta-gtttgcttttggtgagtgcttggatagcggga 113  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||| || |||||||||||||||||||         ||||    
T  37918763 aagcttacccccagtggtttcgaccgcctaccagtttgtatgaatgggtaaacgaagtgcaggaatatgtttgcttttggtgagtgc---------ggga 37918853  T
Q  114 gctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttat 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| |||||||||||||||||||||||     
T  37918854 gctaatctccgttatcgtttcttggagtcctagatttaggctctgatcaggacgttggtctttatgtctttgttaaatttatttattattgagattttac 37918953  T
Q  207 ccatatgtcgggacttggagaatttatatgatgatgt 243  Q
     |||||||||||||||||||||||| |||||||||||    
T  37918954 tcatatgtcgggacttggagaatttttatgatgatgt 37918990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 8602600 - 8602369
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggag 114  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||||||||| | ||||||| |||| |||  ||||||| |||||  ||||||||||    
T  8602600 aagcttacccccagtggttttgaccgtctacctgtctgtatggatgggtagacgaagtgcaggattagtctgc--ttggtgattgcttttatagcgggag 8602503  T
Q  115 ctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatc 207  Q
    || ||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||  |||||| ||||||||||||||||| |    
T  8602502 ct-atctccgttatcgtttcttggagtcttagatttaggctctgattaggacgttggtctttatgtctttgtcggattta-ttattattgagattttacc 8602405  T
Q  208 catatgtcgggacttggagaatttatatgatgatgt 243  Q
    ||||||||||||||||||||||||||||||||||||    
T  8602404 catatgtcgggacttggagaatttatatgatgatgt 8602369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 25106199 - 25106316
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||  ||||||||||||||||||| |||    
T  25106199 tgaagcttacccctagtagttttgaccgcctacctgtttgtgtgaatgggtagacggagtgcaggagtagtttgc--ttggtgagtgcttggatagaggg 25106296  T
Q  113 agctaatctccgttatcgttt 133  Q
    | || |||| |||||||||||    
T  25106297 atct-atcttcgttatcgttt 25106316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 15988850 - 15988767
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  15988850 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacgaagtgcaggattagtttgctttcggtgagt 15988767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 112
Target Start/End: Complemental strand, 17391303 - 17391201
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgc---ttttggtgagtgcttggatagc 109  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||   ||| ||||||||||||||||||    
T  17391303 tgaagcttacccctagtggttttgaccacctacctgtttgtatgaatgggtagacgaagtgcatgagtagtttgcttgtttcggtgagtgcttggatagc 17391204  T
Q  110 ggg 112  Q
    |||    
T  17391203 ggg 17391201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 41659925 - 41659808
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcggga 113  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||| ||  | || ||||||||| ||||||||||||||||    
T  41659925 aagcttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcaggatta-atcgc-tttggtgagttgcttggatagcggga 41659828  T
Q  114 gctaatctccgttatcgtttc 134  Q
    ||| |||||||||||||||||    
T  41659827 gct-atctccgttatcgtttc 41659808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 15551777 - 15551900
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt-gcttggatagcgggagctaatctccgttatcgtttc 134  Q
    |||||||||||||| |||||| ||||||||||| | || | || ||||| | | ||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  15551777 gaccgcctacctgtctgtatggatgggtagacgaagtgtatgattagtt-gttgttggtgagttgcttggataccgggagcta-tctccgttatcgtttc 15551874  T
Q  135 ttggagtcctagatttaggctctgat 160  Q
    |||||||| |||||||||||||||||    
T  15551875 ttggagtcttagatttaggctctgat 15551900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 11517321 - 11517428
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctc 122  Q
    ||||| || |||||||||| |||||||||||||||||||||||||| | |||| |||||||||  | ||||||||||||||||| | ||||||| |||||    
T  11517321 ccccaatgattttgaccgcatacctgtttgtatgaatgggtagacgaagtgcatgagtagttt--tcttggtgagtgcttggatggtgggagct-atctc 11517417  T
Q  123 cgttatcgttt 133  Q
    |||||||||||    
T  11517418 cgttatcgttt 11517428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 6817514 - 6817610
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatctccgttatcgttt 133  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||| | |||||||||| |||||| |||||| |||||||||    
T  6817514 gaccgcctacctgtttgtatgaatgggtagacggcgtgcaggattag-ttgcttttggtgagtttcttggatagctggagct-atctccattatcgttt 6817610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 5230472 - 5230544
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtg 99  Q
    |||||||||||||||||||||||||||||| | ||||||||  | ||||||| ||||||||||||||||||||    
T  5230472 agtggttttgaccgcctacctgtttgtatggaagggtagacaaagtgcaggattagtttgcttttggtgagtg 5230544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 6230512 - 6230574
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||    
T  6230512 aagcttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcagg 6230574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 17320428 - 17320497
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||| |||||    
T  17320428 aagcttaaccccagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcaggattagtt 17320497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 17760691 - 17760778
Alignment:
Q  43 tacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatctccgttatcg 130  Q
    ||||| |||||||||||||||||||||  ||||||| ||||||| |||||||||| |||||| |||||||||||| |||| ||||||||    
T  17760691 tacctatttgtatgaatgggtagacggcgtgcaggattagtttgtttttggtgagttgcttgcatagcgggagct-atcttcgttatcg 17760778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 19062011 - 19062098
Alignment:
Q  43 tacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatctccgttatcg 130  Q
    ||||| |||||||||||||||||||||  ||||||| ||||||| |||||||||| |||||| |||||||||||| |||| ||||||||    
T  19062011 tacctatttgtatgaatgggtagacggcgtgcaggattagtttgtttttggtgagttgcttgcatagcgggagct-atcttcgttatcg 19062098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 14182254 - 14182413
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt------------gc 100  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||| | |  |||  |||||| |||| |||||||            ||    
T  14182254 tgaagctaacccccaatggttttgaccgcctatctgtttgtatgaatgggtagacgaagtatagggttagtttcctttcggtgagttgcttggtgattgc 14182353  T
Q  101 ttggatagcgggagctaatctccgttatcgtttcttggagtcctagatttaggctctgatt 161  Q
    ||||||||| |||||||||||||||||||| |  || ||||| |||| |||||||||||||    
T  14182354 ttggatagcaggagctaatctccgttatcggtgtttagagtcttaga-ttaggctctgatt 14182413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 43429388 - 43429470
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||||||||||||||||||||| |||||||| |||||  ||||||||||| | | ||||| ||| |||||||||||||||    
T  43429388 aagcttacccccagtggttttgaccgtctacctgtctgtatagatgggtagacgaagtacaggattag-ttgcttttggtgagt 43429470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 4147546 - 4147608
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    ||||||||||||||||||||||||||||||||||| | |||| ||||||||||| | ||||||    
T  4147546 aagcttacccccagtggttttgaccgcctacctgtctatatggatgggtagacgaagtgcagg 4147608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 6148728 - 6148778
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  6148728 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 6148778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 14296725 - 14296675
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14296725 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 14296675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 14302352 - 14302302
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14302352 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 14302302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 15548823 - 15548773
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  15548823 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 15548773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 39654158 - 39654108
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  39654158 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 39654108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 2045589 - 2045524
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  2045589 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 2045524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 11330846 - 11330895
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  11330846 ttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 11330895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 47786743 - 47786790
Alignment:
Q  21 acccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  47786743 acccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 47786790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 8688002 - 8687932
Alignment:
Q  173 tctttgttagatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||| ||||||||| || ||||||||| | ||||||||||||| ||||||| ||||||| |||||||    
T  8688002 tctttgttggatttatttgtttttgagatttgacccatatgtcgggatttggagattttatatcatgatgt 8687932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 9039871 - 9039801
Alignment:
Q  173 tctttgttagatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||| ||||||||| || ||||||||| | ||||||||||||| ||||||| ||||||| |||||||    
T  9039871 tctttgttggatttatttgtttttgagatttgacccatatgtcgggatttggagattttatatcatgatgt 9039801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 11199420 - 11199470
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  11199420 cttacccccagtggttttgaccgcctacctgtctgtatggatgagtagacg 11199470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 12020238 - 12020188
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  12020238 cttacccccagtggttttgtccgcctacctgtctgtatggatgggtagacg 12020188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 12563402 - 12563452
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  12563402 cttaccccaagtggttttgaccgcctacctgtctgtatggatgggtagacg 12563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 14819699 - 14819761
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||| | ||||||    
T  14819699 aagcttacctccagtggttttgaccgcctacctgtctgtatggatgagtagacgaagtgcagg 14819761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 17137694 - 17137644
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  17137694 cttacccccagtggttttgaccgcctacctgcctgtatggatgggtagacg 17137644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 17202953 - 17202903
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  17202953 cttacccccagtggttttgtccgcctacctgtctgtatggatgggtagacg 17202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 35121916 - 35121866
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  35121916 cttaccccaagtggttttgaccgcctacctgtctgtatggatgggtagacg 35121866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 40937938 - 40937888
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  40937938 cttacccccagtggttttgaccgcctacctatctgtatggatgggtagacg 40937888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 4164106 - 4164151
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  4164106 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 4164151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 14968137 - 14968088
Alignment:
Q  21 acccccagtggt-tttgaccgcctacctgtttgtatgaatgggtagacgg 69  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  14968137 acccccagtggtctttgaccgtctacctgtttgtatgaatgggtagacgg 14968088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 19230313 - 19230248
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||||||   ||||||||||||    
T  19230313 cttacccccagtggttttaaccacctacctgtctgtatggatgggtagacgttgtgcaggagtagt 19230248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 19262912 - 19262977
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  19262912 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 19262977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 30204691 - 30204642
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  30204691 cttactcccagtggttttgaccgcctacctgtctgtatggatgggtagac 30204642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 53900472 - 53900517
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  53900472 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 53900517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 8630051 - 8629987
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||| |||||| ||||||||| ||| |||||| ||||||||||| | ||||||||||||    
T  8630051 ttacccccagcggttttaaccgcctacatgtctgtatggatgggtagacgtagtgcaggagtagt 8629987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 14523283 - 14523331
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||    
T  14523283 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtaga 14523331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 25769523 - 25769479
Alignment:
Q  24 cccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  25769523 cccagtggttttgaccgcctacctgtctgtatggatgggtagacg 25769479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 11636828 - 11636765
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagga 78  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||| || ||| | |||||||    
T  11636828 aagcttacccccagtggttttgaccgcctacttgtctgtatggatggttatacgaagtgcagga 11636765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 11822683 - 11822632
Alignment:
Q  34 ttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagttt 85  Q
    |||||||||||||| |||||||||||||||||| ||  ||||||||||||||    
T  11822683 ttgaccgcctacctatttgtatgaatgggtagaaggcgtgcaggagtagttt 11822632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 14061115 - 14061165
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| |||||||||||||| |||||||| |||||| |||||||||||    
T  14061115 cttacccctagtggttttgaccgactacctgtctgtatggatgggtagacg 14061165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 22146150 - 22146200
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||||||||||||||||||||||| ||| |||||| |||||||||||    
T  22146150 cttatccccagtggttttgaccgcctacatgtctgtatggatgggtagacg 22146200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 50113996 - 50114046
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||| | |||||||| |||||| |||||||||||    
T  50113996 cttacccccagtggttttgactgtctacctgtctgtatggatgggtagacg 50114046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 2048318 - 2048253
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||| ||||| ||| |||||| |||||||||||   ||||||||||||    
T  2048318 cttacccccagtggttttaacctcctacttgtctgtatggatgggtagacgttgtgcaggagtagt 2048253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 10736819 - 10736754
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||| |||| |||| |||||| |||||||||||   ||||||||||||    
T  10736819 cttacccccagtggttttaaccacctatctgtctgtatggatgggtagacgttgtgcaggagtagt 10736754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 14287318 - 14287269
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||| ||||||||||||||||||||||| | |||| ||||||||||    
T  14287318 cttacccctagtggttttgaccgcctacctgtctttatggatgggtagac 14287269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 17098899 - 17098858
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  17098899 agtggttttgaccgcctacctgtctgtatggatgggtagacg 17098858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 17536933 - 17536978
Alignment:
Q  22 cccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||    
T  17536933 cccccagtggttttgactgcctacctgtctgtatggatgggtagac 17536978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 18008983 - 18009024
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  18008983 agtggttttgaccgcctacctgtctgtatgtatgggtagacg 18009024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 33371220 - 33371273
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| |||||||||||||||||||||| || |||||| ||| |||||||    
T  33371220 aagcttaccaccagtggttttgaccgcctaccggtctgtatggatgagtagacg 33371273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 45581095 - 45581046
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||| ||||||||||||| |||||| |||||||||||    
T  45581095 ttacccccaatggttttaaccgcctacctgtctgtatggatgggtagacg 45581046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 294012 - 293964
Alignment:
Q  195 ttgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| ||||||    
T  294012 ttgagattttacccatatgtcgggatttggagattttatatggtgatgt 293964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 24901769 - 24901883
Alignment:
Q  34 ttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt---ttgctt--ttggtgagtgctt--ggatagcgggagctaatctccgtt 126  Q
    |||||||||||||| ||||||||||||||||||||   |||| || ||||   ||||||  |||||||||||||  |||||||||||||| | |||||||    
T  24901769 ttgaccgcctacctatttgtatgaatgggtagacgacgtgcatgaatagtttgttgcttgcttggtgagtgcttgaggatagcgggagct-acctccgtt 24901867  T
Q  127 atcgtttcttggagtc 142  Q
    |||  || ||||||||    
T  24901868 atctgtttttggagtc 24901883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 31416123 - 31416223
Alignment:
Q  32 ttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt-gcttggatagcgggagctaatctccgttatcg 130  Q
    ||||||| |||||||||| |||||| ||| ||||||| | |||| || ||||| ||||| ||||||| |||||||||||||||||| ||||| ||||||     
T  31416123 ttttgactgcctacctgtctgtatggatgagtagacgaagtgcatgattagtt-gcttt-ggtgagttgcttggatagcgggagct-atctctgttatca 31416219  T
Q  131 tttc 134  Q
    ||||    
T  31416220 tttc 31416223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 11884089 - 11884138
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| |||||||| |||||||||||||| |||||| |||||||||||    
T  11884089 cttacccctagtggttt-gaccgcctacctgtctgtatggatgggtagacg 11884138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 13815851 - 13815801
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||  ||||| ||||||||||||| |||||| |||||||||||    
T  13815851 cttacccccagaagttttaaccgcctacctgtctgtatggatgggtagacg 13815801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 34558182 - 34558132
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| ||||||||||| |||| | |||||| |||||||||||    
T  34558182 cttacccccagtgattttgaccgcccacctttctgtatggatgggtagacg 34558132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 55314655 - 55314589
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||||||||| ||||||||| || |||||||  || |||||||   ||||||||||||    
T  55314655 gcttacccccagtggttttaaccgcctacttgcttgtatgggtgagtagacgttgtgcaggagtagt 55314589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 55443753 - 55443799
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggta 64  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||    
T  55443753 cttacccctagtggttttaaccgcctacctgtctgtatggatgggta 55443799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 319499 - 319540
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||| |||||| |||||||||||    
T  319499 agtggttttaaccgcctacctgtctgtatggatgggtagacg 319540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 12351722 - 12351763
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||| |||||| |||||||||||    
T  12351722 agtggttttaaccgcctacctgtctgtatggatgggtagacg 12351763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 14819784 - 14819824
Alignment:
Q  90 ttggtgagtgcttggatagcgggagctaatctccgttatcgt 131  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  14819784 ttggtgattgcttggatagcgggagct-atctccgttatcgt 14819824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 15515912 - 15515871
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||| |||||||||||| |||||| |||||||||||    
T  15515912 agtggttttgcccgcctacctgtctgtatggatgggtagacg 15515871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 20419053 - 20419020
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacgg 69  Q
    |||||||||||| |||||||||||||||||||||    
T  20419053 gaccgcctacctatttgtatgaatgggtagacgg 20419020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 21168568 - 21168685
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt-gcttggatagcggga 113  Q
    |||||||| || | ||||| ||||| ||||| |||  ||||| ||||||| ||| | |||| || ||||||   |||||||||| |||||||||||||||    
T  21168568 aagcttacacctaatggttctgaccacctacttgtcagtatggatgggtaaacgaagtgcatgattagtttc--tttggtgagttgcttggatagcggga 21168665  T
Q  114 gctaatctccgttatcgtttc 134  Q
    | | |||||||||||||||||    
T  21168666 g-ttatctccgttatcgtttc 21168685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 6817707 - 6817743
Alignment:
Q  207 ccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||| |||||||| |||||||||||||||||||||||    
T  6817707 ccatttgtcgggatttggagaatttatatgatgatgt 6817743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 23490755 - 23490699
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||| ||||||||||| | |||||| |||||||||||   ||||||||||||    
T  23490755 agtggttttaaccgcctacctatctgtatggatgggtagacgttgtgcaggagtagt 23490699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 30177596 - 30177640
Alignment:
Q  34 ttgaccgcctacctgtttgtatgaatgggtagacggaatgcagga 78  Q
    |||||||||| ||| |||||||||||||||||||||  |||||||    
T  30177596 ttgaccgcctgcctatttgtatgaatgggtagacggtgtgcagga 30177640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 11600374 - 11600137
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |    
T  11600374 tgaagcttactcccagtggttttgaccgcctacctgtttgtatgaatgggtagacggagtgcatgagtagtttgcttttggtgagtgcttggatagcgag 11600275  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||| ||||    
T  11600274 agctaatcttcgttatcgtttcttggagtcctagatttaggctctgattagaacgttggtctttatgtctttgttggatttatttattattgagacttta 11600175  T
Q  206 tccatatgtcgggacttggagaatttatatgatgatgt 243  Q
     |||||||| |||| ||| |||||||||||||||||||    
T  11600174 cccatatgttgggatttgaagaatttatatgatgatgt 11600137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 16000467 - 16000244
Alignment:
Q  25 ccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccg 124  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  16000467 ccagtggtttcaaccgcctacctgtttgtatgaatgtgtagacggagtgcaggagtagtttgtttttgatgagtgcttggatagcggaagctaatctccg 16000368  T
Q  125 ttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcgg 217  Q
    |||||| ||||||||||| |||| ||||||||||||       |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |    
T  16000367 ttatcg-ttcttggagtcttaga-ttaggctctgattagaacgttggtctttatgtctttgttggatttatttattattgagattttacccatatgtcag 16000270  T
Q  218 gacttggagaatttatatgatgatgt 243  Q
    || || ||||||||||||||||||||    
T  16000269 gatttagagaatttatatgatgatgt 16000244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 22884087 - 22883851
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||| |||    
T  22884087 tgaagctaacccctagtggttttgactgcctacctgtttgtatgaatgggtagacagagtgcaggagtagtttacttttggtgagtgcttggatagtggg 22883988  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
    |||||||||| ||||||||||||| ||||| |||| ||||||||||||       | ||||||||||| |||||| || |||||| ||||||||||||||    
T  22883987 agctaatctctgttatcgtttcttagagtcttaga-ttaggctctgattaggacgtcggtctttatgtttttgttggacttatttgttattgagatttta 22883889  T
Q  206 tccatatgtcgggacttggagaatttatatgatgatgt 243  Q
     ||||  ||||||| ||||||| |||||||||||||||    
T  22883888 cccatgcgtcgggatttggagactttatatgatgatgt 22883851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 38 - 243
Target Start/End: Complemental strand, 22319911 - 22319700
Alignment:
Q  38 ccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccgttatcgtttcttg 137  Q
    |||||||||||||| |||||||||||||||||  ||||||| ||||||||||| | ||| ||||||||||||||||||| ||||||||||||||||||||    
T  22319911 ccgcctacctgtttatatgaatgggtagacggcgtgcaggattagtttgctttcgctgattgcttggatagcgggagct-atctccgttatcgtttcttg 22319813  T
Q  138 gagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcgggacttggagaatt 230  Q
    |||||  ||||||||||||||||       |||||||||||||||||||  ||| |||||||||||||||||||| ||||||||||||| || |||||||    
T  22319812 gagtctaagatttaggctctgattaggacgttggtctttatgtctttgtcggatctatttattattgagattttacccatatgtcgggatttagagaatt 22319713  T
Q  231 tatatgatgatgt 243  Q
    |||||||||||||    
T  22319712 tatatgatgatgt 22319700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 37 - 243
Target Start/End: Complemental strand, 22311344 - 22311120
Alignment:
Q  37 accgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt------------ttggtgagtgcttggatagcgggagctaatctccg 124  Q
    |||| ||||||||||||||||||||||||||||  |||| || |||||| |||            ||||||| ||||||||||||||||||| |||||||    
T  22311344 accggctacctgtttgtatgaatgggtagacggcgtgcatgattagttttctttcggtgagttgcttggtgattgcttggatagcgggagct-atctccg 22311246  T
Q  125 ttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcgg 217  Q
    |||||||||||||||||| |||||||||||||| ||       |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  22311245 ttatcgtttcttggagtcttagatttaggctctaattaggatgttggtctttatgtctttgttggatctatttattattgagattttacccatatgtcgg 22311146  T
Q  218 gacttggagaatttatatgatgatgt 243  Q
    || |||||||||||| ||||||||||    
T  22311145 gatttggagaatttacatgatgatgt 22311120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 24237341 - 24237224
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||||| |    
T  24237341 tgaatcttacccccaatggttttgaccacctacctgtttgtatgaatgggtagacggagtgcaggagtagtttgc--ttggtgagtgcctggatagcgtg 24237244  T
Q  113 agctaatctccgttatcgttt 133  Q
    |||| ||||||||||||||||    
T  24237243 agct-atctccgttatcgttt 24237224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 23350471 - 23350353
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||||||||||| || |||||| ||||||||| ||| |||||||||||||||||  ||||||||||||||||  |||||||||||||||||| |||     
T  23350471 tgaagcttacccccaatgcttttgagcgcctaccttttt-tatgaatgggtagacggtgtgcaggagtagtttgc--ttggtgagtgcttggataacgga 23350375  T
Q  113 agctaatctccgttatcgtttct 135  Q
    |||| ||||||||||||||||||    
T  23350374 agct-atctccgttatcgtttct 23350353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 17500164 - 17500049
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggag 114  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||||||||||| | ||||||| ||| ||||  ||||||  |||||||||||||||||    
T  17500164 aagcttacccccagtggttttgaccgcctacctatctgtatggatgggtagacgaagtgcaggattag-ttgc--ttggtggttgcttggatagcgggag 17500068  T
Q  115 ctaatctccgttatcgtttc 134  Q
    || |||||||||||||||||    
T  17500067 ct-atctccgttatcgtttc 17500049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 18263267 - 18263380
Alignment:
Q  16 agcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggag 114  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||  ||| |||| ||||||||| |||||||||||||||||    
T  18263267 agcttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcagggttag-ttgc-tttggtgagttgcttggatagcgggag 18263364  T
Q  115 ctaatctccgttatcgt 131  Q
    || ||||||||||||||    
T  18263365 ct-atctccgttatcgt 18263380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 11542295 - 11542086
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||||||||| |||||||| |||||||||||||| | |||| ||||||||||  | |||| || ||||||||||||||||| ||| ||||||||       
T  11542295 tgaagcttacccc-agtggtttcgaccgcctacctgtctctatggatgggtagacaaagtgcatgattagtttgcttttggtgattgcctggatagc--- 11542200  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
         ||||||||||||||||||||||||| |||| ||||||||||||       ||||| ||||||| |||||| ||||||  | || ||||||||||     
T  11542199 -----atctccgttatcgtttcttggagtcttaga-ttaggctctgattaggacgttggtatttatgtatttgttggattta--tgttgttgagattttg 11542108  T
Q  206 tccatatgtcgggacttggaga 227  Q
     |||| ||||||||||||||||    
T  11542107 cccatgtgtcgggacttggaga 11542086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 23118705 - 23118818
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagcta 117  Q
    ||||||||||||||||||||||||||| |||  ||||| ||| ||||||| | ||||||| ||| |||||||||||||| |||||||||||||||||||     
T  23118705 ttacccccagtggttttgaccgcctacttgtccgtatggatgagtagacgaagtgcaggattag-ttgcttttggtgagttgcttggatagcgggagct- 23118802  T
Q  118 atctccgttatcgttt 133  Q
    ||||||||||||||||    
T  23118803 atctccgttatcgttt 23118818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 23216947 - 23216850
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatctccgttatcgtttc 134  Q
    |||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||    
T  23216947 gaccgcctacctgtttgt-tgaatgggtagacggcgtgcaggattagtttgctttcggtgagctgcttggatagcgggagct-atctctgttatcgtttc 23216850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 45561575 - 45561710
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt------------gcttggatagcgggagctaatctcc 123  Q
    |||||||||||||| |||||| ||||||||||| | ||||||| || ||||||||||||||||            ||||||||||||||||||| ||||     
T  45561575 gaccgcctacctgtctgtatggatgggtagacgaagtgcaggattaatttgcttttggtgagttgcttggtgatcgcttggatagcgggagcta-tctct 45561673  T
Q  124 gttatcgtttcttggagtcctagatttaggctctgat 160  Q
    ||||||||||||||||||| |||||||||||||||||    
T  45561674 gttatcgtttcttggagtcttagatttaggctctgat 45561710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 24906249 - 24906168
Alignment:
Q  18 cttacccccagtggtttt-gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||| |||||||| ||||||||||    
T  24906249 cttacccccagtggtttttgatcgcctacctgtttgtatgaatgggtagacgaagtgcaggattagtttgcatttggtgagt 24906168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 25608204 - 25608072
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctttt---------ggtgagtgcttggatagcgggagctaatctccgtt 126  Q
    ||||||||||||||||||||||||||||||||||  |||| || ||||||||||||         ||||| ||||||||||||||||||| |||||||||    
T  25608204 gaccgcctacctgtttgtatgaatgggtagacggcgtgcaagattagtttgcttttggtgtgcttggtgattgcttggatagcgggagct-atctccgtt 25608106  T
Q  127 atcgtttcttggagtcctagatttaggctctgat 160  Q
    ||||||| |||||||| || || |||||| ||||    
T  25608105 atcgttttttggagtcttaaatgtaggctatgat 25608072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 19333910 - 19334042
Alignment:
Q  39 cgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt------------gcttggatagcgggagctaatctccgtt 126  Q
    ||||||||||| |||||| ||||||||||| | ||||||| ||||||||||| |||||||            ||||||||||||||||||| ||||| ||    
T  19333910 cgcctacctgtctgtatggatgggtagacgaagtgcaggattagtttgctttcggtgagttgcttggtgattgcttggatagcgggagcta-tctccatt 19334008  T
Q  127 atcgtttcttggagtcctagatttaggctctgat 160  Q
    |||||||||||||||| |||||||||||||||||    
T  19334009 atcgtttcttggagtcttagatttaggctctgat 19334042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 22499154 - 22499232
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggt 94  Q
    ||||||||||||||||||||| ||||||||||||| |||||| || |||||||| | ||||||| |||||||||||||||    
T  22499154 aagcttacccccagtggttttaaccgcctacctgtctgtatggat-ggtagacgaagtgcaggattagtttgcttttggt 22499232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 7468615 - 7468496
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcggga 113  Q
    ||||||||| ||  ||||||||||||||||| ||| |||||| ||||||||||| | |||| || ||| |||| ||||||||| ||||||||||| ||||    
T  7468615 aagcttacctcccatggttttgaccgcctacatgtctgtatggatgggtagacgaagtgcaagattag-ttgc-tttggtgagttgcttggatagtggga 7468518  T
Q  114 gctaatctccgttatcgtttctt 136  Q
    ||| |||||||||||||||||||    
T  7468517 gct-atctccgttatcgtttctt 7468496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 20655948 - 20655998
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  20655948 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 20655998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21695894 - 21695844
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  21695894 cttacccctagtggttttgaccgcctacctgtctgtatgaatgggtagacg 21695844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 23879249 - 23879148
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt---ttgctt--ttggtgagtgcttggatagcgggagctaatctccgttatcg 130  Q
    |||||||||||| |||||||||||||||||||||  |||| || ||||   ||||||  ||||||||||||||||||| ||||||| |||| ||||||||    
T  23879249 gaccgcctacctatttgtatgaatgggtagacggtgtgcaagattagtttgttgcttgcttggtgagtgcttggatagtgggagct-atctacgttatcg 23879151  T
Q  131 ttt 133  Q
    |||    
T  23879150 ttt 23879148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 29758554 - 29758489
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  29758554 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 29758489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 17283544 - 17283500
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  17283544 ccccagtggttttgaccgcctacctgtctgtatgaatgggtagac 17283500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 24387599 - 24387663
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  24387599 ttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 24387663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 23229153 - 23229204
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  23229153 gcttacccctagtggttttgaccgcctacctgtgtgtatggatgggtagacg 23229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 33170574 - 33170492
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||| || ||||||||||||||||||| ||| |||||| ||||||||||| | ||||||| ||  |||||||||||||||    
T  33170574 aagcttacgccaagtggttttgaccgcctacttgtctgtatggatgggtagacgaagtgcaggatta-attgcttttggtgagt 33170492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 24266314 - 24266252
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    ||||||||||||||||||||||||||||||| ||| |||||| |||| |||||| | ||||||    
T  24266314 aagcttacccccagtggttttgaccgcctacatgtctgtatggatggatagacgaagtgcagg 24266252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 25120740 - 25120690
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  25120740 cttaaccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 25120690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 20479888 - 20479823
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  20479888 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 20479823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 20708109 - 20708040
Alignment:
Q  16 agcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagttt 85  Q
    ||||||| |||| ||||||||||||||||||||| |||||| ||||||||||| | ||||| | ||||||    
T  20708109 agcttactcccaatggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcagaattagttt 20708040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 43375498 - 43375563
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||| ||||||   ||||||||||||    
T  43375498 cttacccccagtggttttaaccgcctacctgtctgtatggatggatagacgttgtgcaggagtagt 43375563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 24554430 - 24554554
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt-----------ttggtgagtgcttggata 107  Q
    ||||||||||||||||| ||||| ||||| | |||||| ||||||||||| | ||||||| ||| ||||||           ||||||| ||||||||||    
T  24554430 ttacccccagtggttttaaccgcttacctttctgtatggatgggtagacgaagtgcaggattag-ttgctttggtgagttgcttggtgattgcttggata 24554528  T
Q  108 gcgggagctaatctccgttatcgtttc 134  Q
    ||||||||| |||||||||||||||||    
T  24554529 gcgggagct-atctccgttatcgtttc 24554554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 29296192 - 29296141
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||||||||| ||| |||||| |||||||||||    
T  29296192 gcttacccctagtggttttgaccgcctacatgtctgtatggatgggtagacg 29296141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 37655501 - 37655552
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| |||||||||||||| |||||| |||||| |||||||||||    
T  37655501 gcttacccccaatggttttgaccgccaacctgtctgtatggatgggtagacg 37655552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 18769996 - 18770046
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| ||| |||||||    
T  18769996 cttacccctagtggttttgaccgcctacctgtctgtatggatgtgtagacg 18770046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 21192587 - 21192637
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| |||||||||||| |||||||||| |||||| |||||||||||    
T  21192587 cttacccctagtggttttgactgcctacctgtctgtatggatgggtagacg 21192637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21679428 - 21679379
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||    
T  21679428 cttacccccagtggttt-gaccgcctacctgtctgtatggatgggtagacg 21679379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 22323419 - 22323469
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||| |||||||| |||| |||||| |||||||||||    
T  22323419 cttacccccagtggttttaaccgcctatctgtctgtatggatgggtagacg 22323469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 28543146 - 28543096
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||| ||||||||||||||||||||||||| | |||| |||||||||||    
T  28543146 cttacctccagtggttttgaccgcctacctgtctatatggatgggtagacg 28543096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 38531877 - 38531827
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  38531877 cttacccctagtggttttgaccgcctacctatctgtatggatgggtagacg 38531827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 16204184 - 16204249
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||| ||| |||||| ||||||||| |   ||||||||||||    
T  16204184 cttacccccagtggttttaaccgcctacatgtctgtatggatgggtagaagctgtgcaggagtagt 16204249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 21200022 - 21200063
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  21200022 agtggttttgaccgcctacctgtctgtatggatgggtagacg 21200063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 37605274 - 37605229
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||    
T  37605274 ccccagtggttttgaccgcctacctgtctatatggatgggtagacg 37605229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 21233889 - 21233933
Alignment:
Q  23 ccccagtggttttgaccgcctacctg-tttgtatgaatgggtaga 66  Q
    |||||||||||||||||||||||||| |||||||| |||||||||    
T  21233889 ccccagtggttttgaccgcctacctgttttgtatggatgggtaga 21233933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 5851810 - 5851767
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    |||||||||||||||| |||||||||| |||||| |||||||||    
T  5851810 ccccagtggttttgactgcctacctgtctgtatggatgggtaga 5851767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 23154465 - 23154516
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||| ||| |||||||||||||||||| |||| |||||| |||||||||||    
T  23154465 gcttatccctagtggttttgaccgcctatctgtctgtatggatgggtagacg 23154516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 47
Target Start/End: Complemental strand, 15931640 - 15931610
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacct 47  Q
    |||||||||||||||||||||||||||||||    
T  15931640 gcttacccccagtggttttgaccgcctacct 15931610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 17731392 - 17731442
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| | |||||| ||| |||||||    
T  17731392 cttacccccagtggttttgaccgactacctatctgtatggatgtgtagacg 17731442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 23835540 - 23835490
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||| ||||||||| | |||||| |||||||||||    
T  23835540 cttacccctagtggttttgatcgcctacctatctgtatggatgggtagacg 23835490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 39448651 - 39448701
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| || ||||||||| |||||||||||||||||| || ||||||||    
T  39448651 cttaccctcaatggttttgatcgcctacctgtttgtatggataggtagacg 39448701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 41243943 - 41243893
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  41243943 cttaacccaagtggttttaaccgcctacctgtctgtatggatgggtagacg 41243893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 17264596 - 17264560
Alignment:
Q  207 ccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||| |||||||| |||||||||||||||||||||||    
T  17264596 ccatttgtcgggatttggagaatttatatgatgatgt 17264560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 17264727 - 17264692
Alignment:
Q  98 tgcttggatagcgggagctaatctccgttatcgtttc 134  Q
    ||||||||||||||||||| |||||||||||||||||    
T  17264727 tgcttggatagcgggagct-atctccgttatcgtttc 17264692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 25093161 - 25092923
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25093161 tgaagcttacccctagtggttttgaccgccaacctgtttgtatgaatggatagacggagtgcaggagtagtttgcttttggtgagtgcttggatagcggg 25093062  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctga-------tttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||        |||||| ||||||||||||| ||||||||||||||||||| ||||    
T  25093061 agctaatctccgttatcatttcttggagtcttagatttaggctctgactaggacgttggtcattatgtctttgttggatttatttattattgagaattta 25092962  T
Q  206 tccata-tgtcgggacttggagaatttatatgatgatgt 243  Q
     ||||| |||||||| |||||||||||||||||||||||    
T  25092961 cccatattgtcgggatttggagaatttatatgatgatgt 25092923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 243
Target Start/End: Complemental strand, 20192050 - 20191813
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  20192050 tgaagcttacccccagtggtttcgaccgcctacctgtttgtatgaatgggtagacggagtgtaggagtagtttgctttttgtgagtgcttggatagcggg 20191951  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
    ||||||||||| ||||||||| |||||||| |||| ||||||||||||       ||||||||||||||||||||  |||||||||||||||||||||||    
T  20191950 agctaatctccattatcgtttattggagtcttaga-ttaggctctgattaggacgttggtctttatgtctttgttgaatttatttattattgagatttta 20191852  T
Q  206 tccata-tgtcgggacttggagaatttatatgatgatgt 243  Q
     ||||| ||||||||||||||||| ||||||||||||||    
T  20191851 cccatattgtcgggacttggagaacttatatgatgatgt 20191813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 38 - 243
Target Start/End: Original strand, 78389 - 78601
Alignment:
Q  38 ccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatctccgttatcgtttctt 136  Q
    |||||||||||| |||||| ||||||||||| | |||| || |||||||||||||||||| |||||||||||||| || |||||||||||||||||||||    
T  78389 ccgcctacctgtctgtatggatgggtagacgaagtgcatgactagtttgcttttggtgagttgcttggatagcggaagataatctccgttatcgtttctt 78488  T
Q  137 ggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcgggacttggagaat 229  Q
    || ||| |||| ||||||||||||       |||||||||||||||||||| |||||||||||||||||||||||| ||| |||||  || |||||||||    
T  78489 ggggtcttaga-ttaggctctgattaggacgttggtctttatgtctttgttggatttatttattattgagattttacccacatgtcaagatttggagaat 78587  T
Q  230 ttatatgatgatgt 243  Q
    ||| ||||||||||    
T  78588 ttacatgatgatgt 78601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 21042095 - 21041986
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctc 122  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||| | ||||||| ||| ||||||||||||| |||||||||||||||| || |||||    
T  21042095 ccccagtggttttgaccgcctacctgtctgtatggatgggtaaacgaagtgcaggattag-ttgcttttggtgattgcttggatagcgggaact-atctc 21041998  T
Q  123 cgttatcgtttc 134  Q
    ||||||||||||    
T  21041997 cgttatcgtttc 21041986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 40438139 - 40438222
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||| |||| || |||||||||||||||||||    
T  40438139 aagcttacccccagtggttttaaccgcctacctgtccgtatggatgggtagacggagtgcatgattagtttgcttttggtgagt 40438222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 40555686 - 40555569
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggag 114  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| | || | || ||| ||||||||||||| |||| ||||| |||||     
T  40555686 aagcttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgtatgattag-ttgcttttggtgattgctcggatatcgggaa 40555588  T
Q  115 ctaatctccgttatcgtttc 134  Q
    || |||| ||||||||||||    
T  40555587 ct-atcttcgttatcgtttc 40555569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 20820753 - 20820668
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |||| | ||||| | ||||||| |||||||||||    
T  20820753 tgaagctaacccctagtggttttgaccgcctacctgtttgtataaatgggttgacgaagtgcagaattagtttgtttttggtgagt 20820668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 46144085 - 46143973
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgg 111  Q
    ||||||||||||||||||||||||||||||||||    |||||| |||||||||||   ||||||  ||| |||| ||||||||| ||||||||||||||    
T  46144085 tgaagcttacccccagtggttttgaccgcctacc----tgtatggatgggtagacgaggtgcagggttag-ttgc-tttggtgagttgcttggatagcgg 46143992  T
Q  112 gagctaatctccgttatcgt 131  Q
    ||||| ||||||||||||||    
T  46143991 gagct-atctccgttatcgt 46143973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 52397979 - 52397918
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcag 76  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||||||||| |||||||    
T  52397979 aagcttacccccagtggttttgaccgccgacctgtctgtatggatgggtagacgaaatgcag 52397918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 5770066 - 5770175
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatct 121  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||| ||| |||| ||||||||| ||||||||||||  ||||| ||||    
T  5770066 ccccagtggttttgaccacctacctgtctgtatggatgggtagacgaagtgcaggattag-ttgc-tttggtgagttgcttggatagcaagagct-atct 5770162  T
Q  122 ccgttatcgtttc 134  Q
    |||||||| ||||    
T  5770163 ccgttatcatttc 5770175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 41213529 - 41213637
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatct 121  Q
    |||||||||||| |||||||||||||| |||||| ||||||||||| | ||||||| ||| |||| ||  ||||| ||||||||||||| ||||| ||||    
T  41213529 ccccagtggtttggaccgcctacctgtctgtatggatgggtagacgaagtgcaggattag-ttgc-ttcagtgagttgcttggatagcgagagct-atct 41213625  T
Q  122 ccgttatcgttt 133  Q
    ||||||||||||    
T  41213626 ccgttatcgttt 41213637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 5676540 - 5676589
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  5676540 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagac 5676589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 22837265 - 22837314
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  22837265 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagac 22837314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 22837468 - 22837517
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  22837468 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagac 22837517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 37235816 - 37235865
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  37235816 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagac 37235865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 35053134 - 35053086
Alignment:
Q  20 tacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  35053134 tacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 35053086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 36358179 - 36358229
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  36358179 cttacccccagtcgttttgaccgcctacctgtctgtatggatgggtagacg 36358229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 49999205 - 49999255
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  49999205 cttacccccagtggttttgaccgcttacctgtctgtatggatgggtagacg 49999255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 9786324 - 9786369
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  9786324 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 9786369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 17607230 - 17607189
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  17607230 agtggttttgaccgcctacctgtttgtatggatgggtagacg 17607189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 20444001 - 20443936
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  20444001 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 20443936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 20529741 - 20529676
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  20529741 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 20529676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 44036796 - 44036861
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||| |||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  44036796 cttacccacagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 44036861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 18505637 - 18505577
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||   ||||||||||||    
T  18505637 ccccagtggttttgaccacctacctgtctgtatggatgggtagacgttgtgcaggagtagt 18505577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 27331113 - 27331157
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  27331113 ccccagtggttttgaccgcctacctgtctgtatggatgggtagac 27331157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 29217405 - 29217361
Alignment:
Q  22 cccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    |||||||||||||||||||||||||||| |||||| |||||||||    
T  29217405 cccccagtggttttgaccgcctacctgtctgtatggatgggtaga 29217361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 18164490 - 18164439
Alignment:
Q  18 cttaccccc-agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  18164490 cttaccccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 18164439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 51658260 - 51658311
Alignment:
Q  18 cttacccccagtgg-ttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  51658260 cttacccccagtgggttttgaccgcctacctgtctgtatggatgggtagacg 51658311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 20956891 - 20956941
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||| ||||||||| |||||| |||| ||||||    
T  20956891 cttacccccagtggttttgaccacctacctgtctgtatggatggttagacg 20956941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 22408167 - 22408217
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  22408167 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtagacg 22408217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 33395184 - 33395150
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgt 49  Q
    |||||||||||||||||||||||||||||||||||    
T  33395184 aagcttacccccagtggttttgaccgcctacctgt 33395150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 5472254 - 5472299
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||    
T  5472254 ccccagtggttttgaccgcctacctgtctgtatggatggatagacg 5472299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 21857748 - 21857683
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| || |||||||||| |||||| | |||||||||   ||||||||||||    
T  21857748 cttacccccagtggttttaactgcctacctgtctgtatggaagggtagacgttgtgcaggagtagt 21857683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 35524359 - 35524404
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||    
T  35524359 ccccagtggttttaaccgcctacctgtctgtatggatgggtagacg 35524404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 37846371 - 37846436
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||| ||||||| ||||| ||||||| |||||| |||||||||||   ||||||||||||    
T  37846371 cttacccccaatggttttaaccgcatacctgtctgtatggatgggtagacgttgtgcaggagtagt 37846436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 20929733 - 20929677
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  20929733 agtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 20929677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 33384220 - 33384164
Alignment:
Q  42 ctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||| |||||| ||||||||||| | |||| || |||||||||||||||||||    
T  33384220 ctacctgtctgtatggatgggtagacgaagtgcaagactagtttgcttttggtgagt 33384164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 20895692 - 20895755
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagta 81  Q
    |||||||| ||||||||| |||||||||||||  ||||| |||||||||||   ||||||||||    
T  20895692 cttacccctagtggttttaaccgcctacctgtcggtatggatgggtagacgttgtgcaggagta 20895755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 27673098 - 27673055
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    ||||||||||||||||||||||||||  |||||| |||||||||    
T  27673098 ccccagtggttttgaccgcctacctgcctgtatggatgggtaga 27673055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 18602934 - 18603000
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||||||||| ||||||||| || |||||||  || |||||||   ||||||||||||    
T  18602934 gcttacccccagtggttttaaccgcctacttgcttgtatgggtgagtagacgttgtgcaggagtagt 18603000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 5472461 - 5472502
Alignment:
Q  202 tttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||| |||| |||||||| |||||||||||||||||||||||    
T  5472461 tttacccatttgtcgggatttggagaatttatatgatgatgt 5472502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 21041897 - 21041856
Alignment:
Q  202 tttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||| |||| |||||||| |||||||||||||||||||||||    
T  21041897 tttacccatttgtcgggatttggagaatttatatgatgatgt 21041856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 21193479 - 21193427
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| |||||||||||||||||||||||| | || ||| |||||||||||    
T  21193479 aagcttactcccagtggttttgaccgcctacctatctg-atggatgggtagacg 21193427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 22148259 - 22148296
Alignment:
Q  31 gttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  22148259 gttttgaccgcctacctgtctgtatggatgggtagacg 22148296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 13 - 241
Target Start/End: Original strand, 45454 - 45688
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| || ||||||||||||| ||||    
T  45454 tgaagcttacctccggtggttttgaccgcctacctgtttgtatgaataggtagacggagtgcatgagtagtttgcttt-ggcgagtgcttggataacggg 45552  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||| ||||||||||||||||||||||||    
T  45553 agctaatctccgttatcgtttcttggagtcctagatttaggttctgattaggacgttggtctttatgtctttgttggatttatttattattgagatttta 45652  T
Q  206 tccatatgtcgggacttggagaatttatatgatgat 241  Q
     |||||||||| |||||| |||||||||||||||||    
T  45653 cccatatgtcgagacttgaagaatttatatgatgat 45688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 16837613 - 16837840
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaa 118  Q
    |||| |||||||||||||||| ||||||||| |||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  16837613 ttactcccagtggttttgaccacctacctgtctgtatggatgggtagacgaagtgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaa 16837712  T
Q  119 tctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccata 211  Q
    |||||||||| ||||||||||||| |||||||||||||||||       |||||||||||||||||| | |||||||||||||||||||||| | |||||    
T  16837713 tctccgttattgtttcttggagtcttagatttaggctctgattaggacattggtctttatgtctttgatggatttatttattattgagatttaacccata 16837812  T
Q  212 tgtcgggacttggagaatttatatgatg 239  Q
     ||||||| |||||||||||||||||||    
T  16837813 agtcgggatttggagaatttatatgatg 16837840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 46 - 243
Target Start/End: Complemental strand, 23412253 - 23412050
Alignment:
Q  46 ctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccgttatcgtttcttggagtccta 145  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |     
T  23412253 ctgtttgtatgaatgggtagacggagtgcagaagtagtttgcttttggtgagtgcttggatagcgggagctaatctccattattgtttcttggagtcttc 23412154  T
Q  146 gatttaggctctgatttgg-------tctttatgtctttgttagatttatttattattgagattttatccatatgtcgggacttggagaatttatatgat 238  Q
    || ||||||| ||||| ||       |||||||||||||||| |||||||||||||||||||||||| | ||||||| ||| ||||||||||||||||||    
T  23412153 ga-ttaggctatgattaggacgttcatctttatgtctttgttggatttatttattattgagattttaccaatatgtcaggatttggagaatttatatgat 23412055  T
Q  239 gatgt 243  Q
    |||||    
T  23412054 gatgt 23412050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 36 - 243
Target Start/End: Original strand, 20456445 - 20456672
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt------------gcttgga--tagcgggagctaatct 121  Q
    ||||||||||||||||||||||||||||||||||  |||| || |||||||||||||||||||            ||| |||  |||||| |||||||||    
T  20456445 gaccgcctacctgtttgtatgaatgggtagacggcgtgcatgactagtttgcttttggtgagttgcttaatgattgctaggacatagcggaagctaatct 20456544  T
Q  122 ccgttatcgtttcttggagtcctagatttaggctctgatttgg-------tctttatgtctttgttagatttatttattattgagattttatccatatgt 214  Q
     |||||||||||||||||||| |||||| ||||||||||| ||       |||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  20456545 tcgttatcgtttcttggagtcttagatt-aggctctgattaggacgttgatctttatgtctttgttggatttatttattatggagattttacccatatgt 20456643  T
Q  215 cgggacttggagaatttatatgatgatgt 243  Q
    ||||| |||||||||||||||||||||||    
T  20456644 cgggatttggagaatttatatgatgatgt 20456672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 11765573 - 11765690
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgc-ttttggtgagtgcttggatagcgg 111  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| |||||||||||| |||||||||||    
T  11765573 tgaagctaatccccagtggttttgaccgcctacctatttgtatgaatgggtagatggagtgcaggagtagtttgctttttggtgagtgattggatagcgg 11765672  T
Q  112 gagctaatctccgttatcg 130  Q
    ||||| |||||||||||||    
T  11765673 gagct-atctccgttatcg 11765690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 3420684 - 3420812
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt----tgct------tttggtgagtgcttgg 104  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| |||||    || |      |||||||| |||||||    
T  3420684 aagcttacccccagtggttttgaccgcctacctgtttgtatggatgggtagacgaagtgcaggattagttgctttggtgagttgtttggtgattgcttgg 3420783  T
Q  105 atagcgggagctaatctccgttatcgtttc 134  Q
    ||||||| |||| |||||||||||||||||    
T  3420784 atagcggaagct-atctccgttatcgtttc 3420812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 14345718 - 14345779
Alignment:
Q  182 gatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  14345718 gatttatttattattgagattttacccatatgtcgggacttgaagaatttatatgatgatgt 14345779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 19872237 - 19872155
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| | |||| || ||| |||||||||||||||    
T  19872237 aagcttacccccagttgttttgaccgcctacctgtctgtatggatgggtagacgaagtgcatgattag-ttgcttttggtgagt 19872155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 6455025 - 6454963
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||    
T  6455025 aagcttatccccagtggttttgaccgcctacctgtctgtatggatgggtagacggagtgcagg 6454963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 14345604 - 14345674
Alignment:
Q  89 tttggtgagtgcttggatagcgggagctaatctccgttatcgtttcttggagtcctagatttaggctctgat 160  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||    
T  14345604 tttggtgattgcgtggatagcgggagcta-tctccgttatcgtttcttggagtcttagatgtaggctttgat 14345674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 24185142 - 24185208
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||||||||   |||||||||||||    
T  24185142 cttacccccagtggttttgaccgcttacctgtctgtatggatgggtagacgttgtgcaggagtagtt 24185208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 33628133 - 33628203
Alignment:
Q  26 cagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtga 96  Q
    ||||||||||||||| |||||| ||||||| |||||||||||| | ||||||| ||||||| |||||||||    
T  33628133 cagtggttttgaccgtctacctatttgtataaatgggtagacgaagtgcaggattagtttgtttttggtga 33628203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 37189971 - 37190021
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  37189971 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 37190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 4863546 - 4863481
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  4863546 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 4863481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 24470550 - 24470485
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  24470550 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 24470485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 7726914 - 7726864
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  7726914 cttacccccagtggttttgaccgcctacctgtctgtatagatgggtagacg 7726864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 11338807 - 11338857
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  11338807 cttacccccagtggttttgatcgcctacctgtctgtatggatgggtagacg 11338857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 11963898 - 11963836
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||||||||||||||||| |  ||||||||  ||||||| |||||||||||||||||||    
T  11963898 gaccgcctacctgtttgtatgacttagtagacggggtgcaggattagtttgcttttggtgagt 11963836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21392427 - 21392377
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  21392427 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 21392377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 23453179 - 23453129
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  23453179 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 23453129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 23460423 - 23460373
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  23460423 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 23460373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 23464684 - 23464634
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  23464684 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 23464634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 28257776 - 28257726
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  28257776 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacg 28257726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 20710762 - 20710717
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  20710762 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 20710717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 26561639 - 26561692
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||| |||||| ||||||||||||||||| |||||| |||||||||||    
T  26561639 aagcttaccctcagtggatttgaccgcctacctgtctgtatggatgggtagacg 26561692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 27185704 - 27185769
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||| |||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  27185704 cttacccccagtgattttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 27185769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 13793453 - 13793410
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgg 61  Q
    |||||||||||||||||||||||||||||||| |||||| ||||    
T  13793453 cttacccccagtggttttgaccgcctacctgtctgtatggatgg 13793410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 24082434 - 24082383
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    |||||||||||||||||||||||| |||||||| | |||||| |||||||||    
T  24082434 aagcttacccccagtggttttgactgcctacctatctgtatggatgggtaga 24082383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 21615320 - 21615275
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||||    
T  21615320 ccccagtggttttgaccgcctacatgtctgtatggatgggtagacg 21615275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 21661606 - 21661647
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  21661606 agtggttttgaccgcctacctgtctgtatggatgggtagacg 21661647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 14345539 - 14345593
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttt 90  Q
    |||||||||| ||||||||||||||||||||| |  |||| || |||||||||||    
T  14345539 gaccgcctacttgtttgtatgaatgggtagacagcgtgcaagattagtttgcttt 14345593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 20614890 - 20614824
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||||||||| ||||||||||||  ||||||  || |||||||   ||||||||||||    
T  20614890 gcttacccccagtggttttaaccgcctacctgcctgtatgggtgagtagacgttgtgcaggagtagt 20614824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 5623281 - 5623398
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt-gcttggatagcggga 113  Q
    |||||||| || | ||||| ||||| ||||| |||  ||||| ||||||| ||| | |||| || ||||||   |||||||||| |||||||||||||||    
T  5623281 aagcttacacctaatggttctgaccacctacttgtcagtatggatgggtaaacgaagtgcatgattagtttc--tttggtgagttgcttggatagcggga 5623378  T
Q  114 gctaatctccgttatcgtttc 134  Q
    | | |||||||||||||||||    
T  5623379 g-ttatctccgttatcgtttc 5623398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 19403804 - 19403760
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||| |||||||||||||| ||| |||||||    
T  19403804 ccccagtggttttgaccgc-tacctgtttgtatggatgagtagacg 19403760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 23236260 - 23236313
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| |||||||  || ||||||||| |||||| |||||||||||    
T  23236260 aagcttacccccaatggttttagccacctacctgtctgtatggatgggtagacg 23236313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 23236345 - 23236388
Alignment:
Q  90 ttggtgagtgcttggatagcgggagctaatctccgttatcgtttc 134  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  23236345 ttggtgattgcttagatagcgggagct-atctccgttatcgtttc 23236388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 5e-77; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 23 - 231
Target Start/End: Complemental strand, 12732486 - 12732271
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctc 122  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12732486 ccccagtgattttgaccgcctacctgtttgtatgaatgagtagacggagtgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctc 12732387  T
Q  123 cgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtc 215  Q
    ||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||  | ||||||    
T  12732386 cgttatcatttcttggagtcctagatttaggctctgattaggacgttggtctttatgtctttgttggatttatttattattgagattttacacgtatgtc 12732287  T
Q  216 gggacttggagaattt 231  Q
    |  | |||||||||||    
T  12732286 gaaatttggagaattt 12732271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 36 - 243
Target Start/End: Original strand, 5373001 - 5373226
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt------------gcttggatagcgggagctaatctcc 123  Q
    ||||||||||||||||||||||||||||||||||  |||| || |||||||||||||||||||            ||||||||||||| ||||||||||     
T  5373001 gaccgcctacctgtttgtatgaatgggtagacggcgtgcatgactagtttgcttttggtgagttgcttgatgattgcttggatagcggaagctaatctct 5373100  T
Q  124 gttatcgtttcttggagtcctagatttaggctctgatttgg-------tctttatgtctttgttagatttatttattattgagattttatccatatgtcg 216  Q
    ||||||||||||||||||| |||||| ||||||||||| ||       ||||||||||||||||  ||||||||||||| ||||||||| |||||||| |    
T  5373101 gttatcgtttcttggagtcttagatt-aggctctgattaggacgttagtctttatgtctttgttgaatttatttattatggagattttacccatatgttg 5373199  T
Q  217 ggacttggagaatttatatgatgatgt 243  Q
    ||| |||||||||||||||||||||||    
T  5373200 ggatttggagaatttatatgatgatgt 5373226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 12136147 - 12136393
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt------------gc 100  Q
    ||||| ||||| ||| |||||| |||||||||||||| |||||| ||||||||||| | ||||||| |||||||||||||||||||            ||    
T  12136147 tgaaggttaccaccaatggtttcgaccgcctacctgtctgtatggatgggtagacgaagtgcaggattagtttgcttttggtgagttgcttggtgattgc 12136246  T
Q  101 ttggatagcgggagctaatctccgttatcgtttcttggagtcctagatttaggctctgatt-------tggtctttatgtctttgttagatttatttatt 193  Q
    ||||||||||| ||||| ||||||||||||| |||||||||| |||||| |||||||||||       ||||||| ||||||||||| ||||||||||||    
T  12136247 ttggatagcggaagcta-tctccgttatcgtatcttggagtcttagatt-aggctctgattaggatgttggtctt-atgtctttgttggatttatttatt 12136343  T
Q  194 attgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  12136344 attgagattttacccacatgtcggtacttggagaatttatatgatgatgt 12136393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 54365934 - 54366055
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgg 111  Q
    ||||||||||||| |||||||||||| || |||||||||||||||||||||||||| | ||||||| || ||||||||||||||| |||||||||||| |    
T  54365934 tgaagcttaccccaagtggttttgacagcatacctgtttgtatgaatgggtagacgaagtgcaggattaatttgcttttggtgagttgcttggatagcag 54366033  T
Q  112 gagctaatctccgttatcgtttc 134  Q
    ||||| |||||||||||||||||    
T  54366034 gagct-atctccgttatcgtttc 54366055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 50224017 - 50224135
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtg-agtgcttggatagcggga 113  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| | |||| || ||| |||||||||||| | |||||||||| |||||    
T  50224017 aagcttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcacgattag-ttgcttttggtgaattgcttggatatcggga 50224115  T
Q  114 gctaatctccgttatcgtttc 134  Q
    ||| |||||||||||||||||    
T  50224116 gct-atctccgttatcgtttc 50224135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 19623896 - 19624011
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtag-tttgcttttggtgagtgcttggatagcgg 111  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||| |||||  ||||||||| ||||||||| ||    
T  19623896 tgaagctaacccctagtggttttgaccacctacctgtttgtatgaatgggtagatggagtgccggagtagttttgc--ttggtgagtacttggatagagg 19623993  T
Q  112 gagctaatctccgttatcg 130  Q
    ||||| |||| ||||||||    
T  19623994 gagct-atcttcgttatcg 19624011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 17378045 - 17378130
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||||||| | ||| ||| ||||||||||| |||||||    
T  17378045 tgaaacttacccccagtagttttgaccgcctacctgtttgtatcaatgggtagacgaagtgcgggattagtttgctttcggtgagt 17378130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 15216125 - 15216245
Alignment:
Q  40 gcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatctccgttatcgtttcttgg 138  Q
    ||||||||||||||||||  |||| |||||  |||| || ||||||| ||| |||||| ||||||||||||||||||| |||| |||||||  |||||||    
T  15216125 gcctacctgtttgtatgatagggttgacggcgtgcatgattagtttgttttcggtgagttgcttggatagcgggagct-atcttcgttatctcttcttgg 15216223  T
Q  139 agtcctagatttaggctctgat 160  Q
    |||| ||||| |||||||||||    
T  15216224 agtcttagatgtaggctctgat 15216245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 17213722 - 17213810
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt-ttggtgagtgct 101  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||| |||||| ||||||||||||    
T  17213722 tgaagctaatccccagtggttttgaccgcctacctgtttgtatgaatggatagacagagtgcaggattag-ttgcttgttggtgagtgct 17213810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 24237211 - 24237135
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt 89  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||   ||||| ||||||||||||    
T  24237211 tgaagctaacccccagttgttttgaccgcctacctgtttgtatgaatgagtagacgtggtgcagaagtagtttgctt 24237135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 41919105 - 41919180
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||||| | ||||||| || ||||||||||||||||    
T  41919105 ccccagtggttttgaccgcctacctgtctgtatggatgagtagacgaagtgcaggattaatttgcttttggtgagt 41919180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 47470192 - 47470312
Alignment:
Q  15 aagcttaccccc--agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgg 111  Q
    ||||||||||||  ||||||||||||| ||||| ||| |||||| ||||||||||| | |||| || ||| |||||||||||||| |||||||||| |||    
T  47470192 aagcttacccccctagtggttttgaccacctacttgtctgtatggatgggtagacgaagtgcatgattag-ttgcttttggtgagttgcttggatatcgg 47470290  T
Q  112 gagctaatctccgttatcgtttc 134  Q
     |||| |||||||||||||||||    
T  47470291 aagct-atctccgttatcgtttc 47470312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 38763094 - 38763041
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  38763094 aagcttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 38763041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 44054163 - 44054098
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||   ||||||||||||    
T  44054163 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 44054098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 109743 - 109678
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  109743 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 109678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 7966457 - 7966522
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||   |||||||||||||    
T  7966457 ttacctccagtggttttgaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagtt 7966522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 7187786 - 7187837
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  7187786 gcttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 7187837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 42707021 - 42706954
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    |||||||||||||||||||||||| ||| |||| |||||| |||||||||||   |||||||||||||    
T  42707021 gcttacccccagtggttttgaccgactatctgtctgtatggatgggtagacgttgtgcaggagtagtt 42706954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 12901636 - 12901686
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||||    
T  12901636 cttacccccagtggttttgaccgtctacctgtctgtatggatgggtagacg 12901686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 13595882 - 13595961
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||| ||| |||||||||||||||||||||||    ||| ||||||||||| | || |||| |||||||||||||||||||    
T  13595882 aagcttatccctagtggttttgaccgcctacctgt----atggatgggtagacgaagtgtaggattagtttgcttttggtgagt 13595961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 13752164 - 13752214
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  13752164 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacg 13752214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 18496339 - 18496389
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  18496339 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 18496389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 20813895 - 20813945
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  20813895 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 20813945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 30236416 - 30236466
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  30236416 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 30236466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 5407466 - 5407413
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||| |||||||    
T  5407466 aagcttacccccagtggttttgaccgcctatctgtctgtatggatgagtagacg 5407413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 53909755 - 53909820
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||||||| |   ||||||||||||    
T  53909755 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagatgttgtgcaggagtagt 53909820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 14569698 - 14569601
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt--ttgctt--ttggtgagtgcttggatagcgggagctaatctccgttatcg 130  Q
    |||||||||||| |||||||||||||||||||||  ||||||||| ||  ||| ||  ||||| |||||| |||||||||||||| |||| ||||||||    
T  14569698 gaccgcctacctatttgtatgaatgggtagacggcgtgcaggagttgttgttggttgcttggtaagtgctcggatagcgggagct-atcttcgttatcg 14569601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 19082807 - 19083049
Alignment:
Q  13 tgaagcttacccccagtggt-tttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt--tgctt--ttggtgagtgcttg--ga 105  Q
    ||||||| || || |||||| ||||||||||||||| ||||||||||  ||||||||    ||| ||||||||  ||||   ||||||||||||||  ||    
T  19082807 tgaagctaactccgagtggtctttgaccgcctacctatttgtatgaacaggtagacgacgcgcatgagtagttgttgctagcttggtgagtgcttgagga 19082906  T
Q  106 tagcgggagctaatctccgttat-cgtttcttggagtcctagatttaggctctgatttgg-------tctttatgtctttgttagatttatt-tattatt 196  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||| ||||||||||| ||       ||||||||| | || | |||||||| | || ||    
T  19082907 tagcgggagcta-tctccgttattcgttt-ttggagtcttagatt-aggctctgattaggatgtcagtctttatgt-tatgctggatttattatgttgtt 19083002  T
Q  197 gagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||||  |||||||||||| ||||||| |||||||| ||||||    
T  19083003 gagattttacgcatatgtcgggatttggagattttatatggtgatgt 19083049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 12838197 - 12838247
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||| || |||||||||| |||||| |||||||||||    
T  12838197 cttacccccagtggttttaacggcctacctgtctgtatggatgggtagacg 12838247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 34198030 - 34198080
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| |||| ||||||||||||||||||| |||||| |||||||||||    
T  34198030 cttacccgcagtagttttgaccgcctacctgtctgtatggatgggtagacg 34198080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 10239292 - 10239345
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| ||||||||||||| ||||||||| | |||| |||||||||||    
T  10239292 aagcttacccctagtggttttgaccacctacctgtctatatggatgggtagacg 10239345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 12246098 - 12246147
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||| | |||||||||||||||||||||| |||||| ||||||||||    
T  12246098 cttaccctcggtggttttgaccgcctacctgtctgtatggatgggtagac 12246147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 19557653 - 19557585
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||||||| |||||||||||||||||||||||  ||||| || |||||||| | ||||||| |||||    
T  19557653 aagcttacccctagtggttttgaccgcctacctgtcagtatggat-ggtagacgaagtgcaggattagtt 19557585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 21961454 - 21961495
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  21961454 agtggttttgaccgcctacctgtctgtatggatgggtagacg 21961495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 41167783 - 41167824
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  41167783 agtggttttgaccgcctacctgtctgtatggatgggtagacg 41167824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 8874352 - 8874416
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||| |||| ||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  8874352 ttactcccattggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 8874416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 18275124 - 18275077
Alignment:
Q  20 tacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||||||||||||||||| |||| || |||||| ||||||||||    
T  18275124 tacccccagtggttttgaccgcttaccagtctgtatgtatgggtagac 18275077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 19624092 - 19624142
Alignment:
Q  192 ttattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||| ||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  19624092 ttatggagatttta-ccatatgtcgggatttggagattttatatgatgatgt 19624142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 53706837 - 53706896
Alignment:
Q  24 cccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||| ||||||||||||  |||||| |||||||||||   ||||||||||||    
T  53706837 cccagtggttttaaccgcctacctgactgtatggatgggtagacgttgtgcaggagtagt 53706896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 15853145 - 15853195
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||| | ||| ||| |||||| |||||||||||    
T  15853145 cttacccccagtggttttgaccacatacatgtctgtatggatgggtagacg 15853195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 37958903 - 37958953
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||| || |||||||||||||||||||| | |||||| |||||||||||    
T  37958903 cttacctccggtggttttgaccgcctacctatctgtatggatgggtagacg 37958953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 54120200 - 54120250
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| |||| |||||||| |||||| |||||||||||    
T  54120200 cttacccctagtggttttaaccgtctacctgtctgtatggatgggtagacg 54120250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 13244601 - 13244536
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||| ||||||| ||| ||||||||| |||||  |||||||||||   ||||||||||||    
T  13244601 cttacccccaatggttttaaccacctacctgtctgtatagatgggtagacgttgtgcaggagtagt 13244536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 16366629 - 16366694
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||||||||  |||||| ||||| |||||| | |||||||||   ||||||||||||    
T  16366629 cttacccccagtggttttatccgcctgcctgtctgtatggacgggtagacgttgtgcaggagtagt 16366694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 41258210 - 41258251
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggta 64  Q
    ||||||||||||||||||||||||||| || ||| |||||||    
T  41258210 ccccagtggttttgaccgcctacctgtctgcatggatgggta 41258251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 25 - 239
Target Start/End: Original strand, 4627 - 4847
Alignment:
Q  25 ccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccg 124  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  4627 ccagtggttttgaccacctacctatttgtatgaattggtagacagagtgcaggagtagtttgcttttggtgagtgcttggatagtgggagctaatctctg 4726  T
Q  125 ttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcgg 217  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  4727 ttatcgtttcttggagtcctagatttaggctctgatttggacgttggtctttatgtc-ttgttggatttatttattattgagattttacccatatgtcgg 4825  T
Q  218 gacttggagaatttatatgatg 239  Q
    || ||||||||||| |||||||    
T  4826 gatttggagaatttttatgatg 4847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 19626 - 19404
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccgtt 126  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  19626 agtggttttgaccgcctacctgtttgtatgaatgtgtagacggagtgcagtagtagtttgcttttggtgagtgtttggatagcgagagctaatcttcgtt 19527  T
Q  127 atcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcggga 219  Q
    |||||||||||||||| |||||||||||||||||       ||| |||||||||| ||||| |||||||||||||||||||||||| | |||||||||||    
T  19526 atcgtttcttggagtcttagatttaggctctgattaggacgttgatctttatgtc-ttgttggatttatttattattgagattttacctatatgtcggga 19428  T
Q  220 cttggagaatttatatgatgatgt 243  Q
     |||||||||||||||||||||||    
T  19427 tttggagaatttatatgatgatgt 19404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 8e-73; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 46 - 239
Target Start/End: Original strand, 18081206 - 18081405
Alignment:
Q  46 ctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccgttatcgtttcttggagtccta 145  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18081206 ctgtttgtatgaatgggtagacggagtgcaggagtagtt-gcttttggtgagtgcttggatagtgggagctaatctccgttatcgtttcttggagtccta 18081304  T
Q  146 gatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcgggacttggagaatttatatgat 238  Q
    |||||||||||||||       ||||||||||||| |||||| |||||||||||||||||||||||| || |||||||||| ||||||||||||||||||    
T  18081305 gatttaggctctgattaggacgttggtctttatgtttttgttggatttatttattattgagattttacccttatgtcgggatttggagaatttatatgat 18081404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 13460650 - 13460567
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  13460650 aagcttacccccaatagttttgaccgcctacctgtttgtatgaatgggtagacagagtgcaggagtagtttgctttcggtgagt 13460567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 28718321 - 28718147
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatctccgttatcgtttc 134  Q
    |||||||||||| |||||||||||||||||||||  |||| || |||||||||||  ||||| |||||||||||  |||||| ||| ||||||||||||     
T  28718321 gaccgcctacctatttgtatgaatgggtagacggcgtgcatgattagtttgctttcagtgagttgcttggatagtaggagct-atccccgttatcgttt- 28718224  T
Q  135 ttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttt 204  Q
    ||  |||| |||||||||||||||||       ||| ||||||||| ||||||||||||||||||||| ||||||||    
T  28718223 tttaagtcttagatttaggctctgattaggaagttgatctttatgtatttgttagatttatttattatggagatttt 28718147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 9322919 - 9323037
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcggga 113  Q
    ||||||||||||||||||||||||||||||| ||| |||||  ||||||||||| | ||||||| ||| |||||||||||||| |||||||||| |||||    
T  9322919 aagcttacccccagtggttttgaccgcctacttgtctgtatcgatgggtagacgaagtgcaggattag-ttgcttttggtgagttgcttggatatcggga 9323017  T
Q  114 gctaatctccgttatcgtttc 134  Q
    ||| ||||||||||| |||||    
T  9323018 gct-atctccgttatagtttc 9323037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 19065557 - 19065450
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt-ttggtgagtgct--tggatagc 109  Q
    ||||||| |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| | ||||||||||   |||||||    
T  19065557 tgaagctaacccacagtggttttgaccgcctacttgtttgtattaatgggtagacggagtgcaggagtagtttgcttgtcggtgagtgctcgaggatagc 19065458  T
Q  110 gggagcta 117  Q
    ||||||||    
T  19065457 gggagcta 19065450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 16370226 - 16370322
Alignment:
Q  24 cccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgct--tttggtgagtgctt--ggatagcgggagct 116  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |  ||||||||||||||  ||||||||||||||    
T  16370226 cccagtgggtttgaccgcctacctgtttgtatggatgggtagacggagtgcaggagtagtttgtttgtttggtgagtgcttgaggatagcgggagct 16370322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 18920958 - 18921068
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagct 116  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||| ||| |||| ||||||||| ||||||||||||||||||     
T  18920958 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcaggattag-ttgc-tttggtgagttgcttggatagcgggagc- 18921054  T
Q  117 aatctccgttatcg 130  Q
    |||||| |||||||    
T  18921055 aatctctgttatcg 18921068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 39293998 - 39294083
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| | |||| || ||||||| |||||||||||    
T  39293998 tgaagcttagccccagtggttttgatcgcctacctgtttgtatgaatgggcagacgaagtgcatgattagtttgattttggtgagt 39294083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 17923117 - 17923050
Alignment:
Q  176 ttgttagatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  17923117 ttgttggatttatttattattgagattttacccatatgtcaggatttggagaatttatatgatgatgt 17923050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 4072872 - 4072998
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt--ttgctt--ttggtgagtgcttggatagcgggagctaatctccgttatcgt 131  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||  ||| ||  ||||||||||||||||||| |||||||  ||||||||||||     
T  4072872 gaccgcctacctgtttgtatgaatgggtagacggcgtgcaggagtagttgttgatttcttggtgagtgcttggatagtgggagct-ttctccgttatcgg 4072970  T
Q  132 ttcttggagtcctagatttaggctctgat 160  Q
    |  |||||||| ||||  |||||||||||    
T  4072971 tctttggagtcttaga-gtaggctctgat 4072998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 39294201 - 39294262
Alignment:
Q  182 gatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  39294201 gatttatttattattgagattttacccatatgtcggtacttgaagaatttatatgatgatgt 39294262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 13452500 - 13452425
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||  | ||||||||| ||||||||| |||||||    
T  13452500 ccccagtagttttgaccgcctacctgtttgtatgaattggtagacaaagtgcaggagtggtttgctttcggtgagt 13452425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 15980372 - 15980507
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt------------ttggtgagtgc 100  Q
    |||||||||||||||||||||| |||||||||||| ||||||  ||||||||||||   || |||| ||| ||||||            ||||||| |||    
T  15980372 tgaagcttacccccagtggtttcgaccgcctacctctttgtaaaaatgggtagacgttttgtaggattagattgctttcggtgagttgcttggtgattgc 15980471  T
Q  101 ttggatagcgggagctaatctccgttatcgtttctt 136  Q
    |||||||||||||||||||||||||||||| |||||    
T  15980472 ttggatagcgggagctaatctccgttatcggttctt 15980507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 3054977 - 3054912
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||   ||||||||||||    
T  3054977 cttacccccagtggttttaaccgcctacctgtttgtatggatgggtagacgttgtgcaggagtagt 3054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 20587496 - 20587565
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||||||||  |||||||| |||||    
T  20587496 aagcttacccccagtggttttgaccgcctacctgtctatatggatgggtagacgacatgcaggattagtt 20587565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 3193892 - 3193963
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagttt 85  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||||  |||||||    
T  3193892 tgaagcttacccc-agtagttttgaccgcctacctgtttgtatgaatgggtaggcggagtgcagacgtagttt 3193963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 4482590 - 4482462
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt-----------ttggtgagtgcttg 103  Q
    |||||||||||||||| ||| |||||||||||||| |||||| ||||||||||| | ||||||| ||| ||||||           ||||||| ||||||    
T  4482590 aagcttacccccagtgatttcgaccgcctacctgtctgtatggatgggtagacgaagtgcaggattag-ttgctttggtgagttgcttggtgattgcttg 4482492  T
Q  104 gatagcgggagctaatctccgttatcgtttc 134  Q
    ||||||||||||| |||||||||||||||||    
T  4482491 gatagcgggagct-atctccgttatcgtttc 4482462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 12753167 - 12753119
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12753167 cttacccccagtggttttgaccgcctacctgtttgtatggatgggtaga 12753119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 5617772 - 5617721
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  5617772 gcttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 5617721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 16915965 - 16915915
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  16915965 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 16915915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 49049728 - 49049778
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  49049728 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 49049778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 11582845 - 11582910
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  11582845 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 11582910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 28388759 - 28388706
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||||||    
T  28388759 aagcttacccccaggggttttgaccgcctacctgtttatatggatgggtagacg 28388706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 17926954 - 17926887
Alignment:
Q  176 ttgttagatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||| |  ||||||||||||||| ||||    
T  17926954 ttgttggatttatttattattgagaatttacccatatgtcgggattcagagaatttatatgataatgt 17926887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 9641363 - 9641284
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||| ||| |||||||||||||||||||||||    ||| ||||||||||| | || |||| |||||||||||||||||||    
T  9641363 aagcttatccctagtggttttgaccgcctacctgt----atggatgggtagacgaagtgtaggattagtttgcttttggtgagt 9641284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 15628999 - 15628949
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  15628999 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 15628949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 16572058 - 16572108
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  16572058 cttacccccagtggttttgaccgcctacctgtctctatggatgggtagacg 16572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 16593604 - 16593554
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  16593604 cttacccccagtggttttgaccgcctacctgtctctatggatgggtagacg 16593554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 141860 - 141815
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  141860 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 141815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34243001 - 34243050
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  34243001 ttaccccgagtggttttgactgcctacctgtttgtatggatgggtagacg 34243050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 12182541 - 12182473
Alignment:
Q  13 tgaagcttacccccagtggt-tttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagt 80  Q
    ||||||| ||||||| || | |||||||||||||| ||||||||||||||||||||||  |||||||||    
T  12182541 tgaagctaacccccaatgatctttgaccgcctaccagtttgtatgaatgggtagacggcgtgcaggagt 12182473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 9609559 - 9609508
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| |||||||||| |||||||||| |||||| |||||||||||    
T  9609559 gcttacccccaatggttttgactgcctacctgtctgtatggatgggtagacg 9609508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 9837131 - 9837080
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| |||||||||| |||||||||| |||||| |||||||||||    
T  9837131 gcttacccccaatggttttgactgcctacctgtctgtatggatgggtagacg 9837080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 13388302 - 13388251
Alignment:
Q  18 cttacccccagtggtttt-gaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||||    
T  13388302 cttacccccagtggtttttgaccgcctacctgtctgtatggatgggtagacg 13388251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 12249948 - 12249998
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||| || |||||||||| |||||| |||||||||||    
T  12249948 cttacccccagtggttttaactgcctacctgtctgtatggatgggtagacg 12249998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 15824376 - 15824426
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  15824376 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtagacg 15824426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 15914277 - 15914326
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||    
T  15914277 cttacccccagtggttt-gaccgcctacctgtctgtatggatgggtagacg 15914326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 17229965 - 17230015
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| | |||| ||| |||||||    
T  17229965 cttacccccagtggttttgaccgcctacctgtctatatggatgagtagacg 17230015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 21677395 - 21677456
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||||||||||||||||||||||||||| |  |||| || ||| |||||||||||||||    
T  21677395 gaccgcctacctgtttgtatgaatgggtagactgcgtgcatgattag-ttgcttttggtgagt 21677456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 45455586 - 45455636
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||||||    
T  45455586 cttatccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 45455636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 122765 - 122700
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||| |||| ||||||||||||| |||||| ||| |||||||   ||||||||||||    
T  122765 cttacccccagtgattttaaccgcctacctgtctgtatggatgagtagacgttgtgcaggagtagt 122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 1938634 - 1938699
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||| ||||||||| ||||||||||||| |||||| ||||||||| |   ||||||||||||    
T  1938634 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtagatgttgtgcaggagtagt 1938699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 13039119 - 13039184
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||| ||||||| ||||||||||||  |||||| |||||||||||   ||||||||||||    
T  13039119 cttacccccaatggttttaaccgcctacctgcctgtatggatgggtagacgttgtgcaggagtagt 13039184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 14939016 - 14938975
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  14939016 agtggttttgaccgcctacctgtctgtatggatgggtagacg 14938975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 15366609 - 15366568
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  15366609 agtggttttgaccgcctacctgtctgtatggatgggtagacg 15366568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 31499551 - 31499506
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||    
T  31499551 ccccagtagttttgaccgcctacctgtctgtatggatgggtagacg 31499506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 12245818 - 12245755
Alignment:
Q  182 gatttatttat--tattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||||||  ||| ||||||||  ||||||||||||| ||||||| |||||||||||||||    
T  12245818 gatttatttatgttatggagattttgcccatatgtcgggatttggagattttatatgatgatgt 12245755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 15305725 - 15305677
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    |||||||||||| | |||||||||||||||||||  |||||||||||||    
T  15305725 gaccgcctacctatctgtatgaatgggtagacggcgtgcaggagtagtt 15305677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 16370404 - 16370452
Alignment:
Q  195 ttgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    ||||||||||| | ||||||||||| ||||||| |||||||||||||||    
T  16370404 ttgagattttacctatatgtcgggatttggagattttatatgatgatgt 16370452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 48345903 - 48345852
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| || ||||||||| |||||||| |||||| |||||||||||    
T  48345903 gcttacccccaatgattttgaccgtctacctgtctgtatggatgggtagacg 48345852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 3893376 - 3893326
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| |||||||||||||| |||||||| ||||||  ||||||||||    
T  3893376 cttacccctagtggttttgaccgtctacctgtctgtatgggtgggtagacg 3893326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 16206326 - 16206196
Alignment:
Q  34 ttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt--ttggtgagtgctt--ggatagcgggagctaatctccgttatc 129  Q
    |||||||||| ||| ||||||||||||||||||| |  ||||||| ||| ||||||  |||||||||||||  |||||||  ||||| | || |||||||    
T  16206326 ttgaccgcctgcctatttgtatgaatgggtagacagcttgcaggattag-ttgcttgcttggtgagtgcttgaggatagcatgagct-accttcgttatc 16206229  T
Q  130 gtttcttggagtcctagatttaggctctgattt 162  Q
     ||| |||||||| |||  | ||||||||||||    
T  16206228 tttttttggagtcttagtataaggctctgattt 16206196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 26072136 - 26072186
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| |||| ||||| | |||||||||||||||||| |||||||||||    
T  26072136 cttacccacagtcgttttaatcgcctacctgtttgtatggatgggtagacg 26072186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 26095923 - 26095973
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| |||| ||||| | |||||||||||||||||| |||||||||||    
T  26095923 cttacccacagtcgttttaatcgcctacctgtttgtatggatgggtagacg 26095973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 32496456 - 32496506
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||| ||||||    
T  32496456 cttacccctagtggttttaaccgcctacctgtctgtatggatggatagacg 32496506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 44863438 - 44863388
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||| || ||||||| ||| || |||||||||||    
T  44863438 cttacccccagtggttttgacagcatacctgtctgtgtggatgggtagacg 44863388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 9058492 - 9058529
Alignment:
Q  31 gttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||| |||||| |||||||||||    
T  9058492 gttttgaccgcctacctgtctgtatggatgggtagacg 9058529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 12245973 - 12245924
Alignment:
Q  37 accgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttg 86  Q
    ||||||||||| ||||||||||||||||||||  ||||| || |||||||    
T  12245973 accgcctacctatttgtatgaatgggtagacgacatgcaagattagtttg 12245924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 14278776 - 14278833
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttgg 93  Q
    |||| ||||||||| | |||| ||||||||||| | ||||||| ||||||||||||||    
T  14278776 gaccacctacctgtctttatggatgggtagacgaagtgcaggactagtttgcttttgg 14278833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 16917864 - 16917835
Alignment:
Q  18 cttacccccagtggttttgaccgcctacct 47  Q
    ||||||||||||||||||||||||||||||    
T  16917864 cttacccccagtggttttgaccgcctacct 16917835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 4073050 - 4073098
Alignment:
Q  195 ttgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    ||||||| ||| |||||| |||||| ||||||| |||||||||||||||    
T  4073050 ttgagatattacccatatatcgggatttggagattttatatgatgatgt 4073098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 13460553 - 13460517
Alignment:
Q  100 cttggatagcgggagctaatctccgttatcgtttctt 136  Q
    |||||| |||||||||||||||||||||||| |||||    
T  13460553 cttggacagcgggagctaatctccgttatcggttctt 13460517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 37 - 243
Target Start/End: Complemental strand, 10560 - 10349
Alignment:
Q  37 accgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccgttatcgtttctt 136  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10560 accgcctacctgtttgtatgaatgggtagacggagtgcaggagtagtatgcttttggtgagtgcttggatagcgggagctaatctctgttatcgtttctt 10461  T
Q  137 ggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcgggacttggagaat 229  Q
    |||||| |||| ||||||||||||       ||| |||||||||||||||| |||||||||||||||||||||||| |||||||| |||| |||||||||    
T  10460 ggagtcttaga-ttaggctctgattaggacgttgatctttatgtctttgttggatttatttattattgagattttacccatatgttgggatttggagaat 10362  T
Q  230 ttatatgatgatgt 243  Q
    ||| ||||||||||    
T  10361 tta-atgatgatgt 10349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 98815 - 99050
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||| || |  | ||||||||| ||||||||||||||||||||||| ||    
T  98815 tgaagcttaacccctgtggtttcgaccgcctacttgtttgtatgaatgggtagacagagtagatgagtagttttcttttggtgagtgcttggatagcagg 98914  T
Q  113 agctaatctccgttatcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagatttta 205  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||       |||||||||||||||||||| ||||||||||||||||||||||||    
T  98915 agctaatctccgttatcg-ttcttggagtcttaga-ttaggctctgattaggacgttggtctttatgtctttgttggatttatttattattgagatttta 99012  T
Q  206 tccatatgtcgggacttggagaatttatatgatgatgt 243  Q
     ||||||||||||| ||||||||||||||| |||||||    
T  99013 cccatatgtcgggatttggagaatttatataatgatgt 99050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 256649 - 256768
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt--ttgctt--ttggtgagtgcttggatag 108  Q
    ||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||  |||| |||||||  ||| ||  || |||||||||||||||     
T  256649 tgaagcttacccctagtggttt-gaccgcctacctgtttggattaatgggtagacggcgtgcatgagtagttgttgattgcttcgtgagtgcttggataa 256747  T
Q  109 cgggagctaatctccgttatcg 130  Q
    |||||| | |||||||||||||    
T  256748 cgggag-ttatctccgttatcg 256768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 236407 - 236357
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||||||    
T  236407 cttatccctagtggttttgaccgcctacctgtatgtatggatgggtagacg 236357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 49 - 243
Target Start/End: Original strand, 73195 - 73393
Alignment:
Q  49 tttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccgttatcgtttcttggagtcctagat 148  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||     
T  73195 tttgtatgaatgggtagacggagtgcaagagtagtt-gcttttggtgagtgcttggatagcgggagctaatcttcgttatcgtttctttgagtcttaga- 73292  T
Q  149 ttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgat 241  Q
    ||| ||||||||       |||||||| ||||| ||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  73293 ttaagctctgattaggacgttggtcttgatgtc-ttgttggatttatttattattgatattttacccatatgtcgggacttggagaatttatatgatgat 73391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 1976 - 2027
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||| ||| |||| |||||| |||||||||||    
T  1976 gcttacccccagtggttttgaccgtctatctgtctgtatggatgggtagacg 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 11633 - 11418
Alignment:
Q  21 acccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatc 120  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||           ||||||||||||||||||||    
T  11633 acccctagtggttttgaccgcctacctgtttgtatgaatgggtagacggattgtaggagtagtttgctt-----------ttggatagcgggagctaatc 11545  T
Q  121 tccgttatcgtttcttggagtcctagatttaggctctgat------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgt 214  Q
    ||| |||||||||||| ||||| |||| ||||||||| ||      || ||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11544 tccattatcgtttctttgagtcttaga-ttaggctctaattaggcattagtctttatgtctttgttggatttatttattattgagattttacccatatgt 11446  T
Q  215 cgggacttggagaatttatatgatgatg 242  Q
    ||||| |||||| |||| | ||||||||    
T  11445 cgggatttggaggatttttgtgatgatg 11418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 22991 - 23218
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggag 114  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||     ||   ||||||  ||||| |||||||||||||||||    
T  22991 aagcttacccccagtggttttgaccgcctacatgtctgtatgaatgggtagacgaagtg-----gtgagttgctt--ggtgattgcttggatagcgggag 23083  T
Q  115 ctaatctccgttatcgtttcttggagtcctagatttaggctctgatt-------tggtctttatgtctttgttagatttatttattattgagattttatc 207  Q
    ||| ||||| ||||||||| |||||||| || ||||||||| |||||       ||||||||||||||||||| |||||||||||||||||||||||| |    
T  23084 cta-tctccattatcgttttttggagtcttaaatttaggctttgattagaacgttggtctttatgtctttgttggatttatttattattgagattttacc 23182  T
Q  208 catatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||| | | |||||||||||||||||||||||    
T  23183 catatgtcagaatttggagaatttatatgatgatgt 23218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 92; Significance: 9e-45; HSPs: 3)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 55757 - 55642
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcggg 112  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||||||||| |||||    
T  55757 tgaagcttacccctagtggttttgaccgcctacctgtttctatgaatgagtagacgaagtgcaggagtagtttgcttttggtgagtgcttggattgcggg 55658  T
Q  113 agctaatctccgttat 128  Q
    ||||||||||||||||    
T  55657 agctaatctccgttat 55642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 49680 - 49557
Alignment:
Q  127 atcgtttcttggagtcctagatttaggctctgatt-------tggtctttatgtctttgttagatttatttattattgagattttatccatatgtcggga 219  Q
    |||||||||||||||| |||||| |||||||||||       |||||||| |  |||||||||||||  ||||||||||||||||| |||||||||||||    
T  49680 atcgtttcttggagtcttagatt-aggctctgattaagacgttggtctttttccctttgttagatttggttattattgagattttacccatatgtcggga 49582  T
Q  220 -cttggagaatttatatgatgatgt 243  Q
      ||| ||||||| | |||||||||    
T  49581 ttttgaagaatttttctgatgatgt 49557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 243
Target Start/End: Complemental strand, 54211 - 54088
Alignment:
Q  127 atcgtttcttggagtcctagatttaggctctgatt-------tggtctttatgtctttgttagatttatttattattgagattttatccatatgtcggga 219  Q
    |||||||||||||||| |||||| |||||||||||       |||||||| |  |||||||||||||  ||||||||||||||||| |||||||||||||    
T  54211 atcgtttcttggagtcttagatt-aggctctgattaagacgttggtctttttccctttgttagatttggttattattgagattttacccatatgtcggga 54113  T
Q  220 -cttggagaatttatatgatgatgt 243  Q
      ||| ||||||| | |||||||||    
T  54112 ttttgaagaatttttctgatgatgt 54088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 7365 - 7150
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagctaatctccgtt 126  Q
    ||||||||||||||||||| ||| |||||| ||||||||||| | ||     ||   ||||  ||||||| ||||||||||||||||| | |||| ||||    
T  7365 agtggttttgaccgcctacatgtctgtatggatgggtagacgaagtg-----gtgagttgc--ttggtgattgcttggatagcgggag-ttatcttcgtt 7274  T
Q  127 atcgtttcttggagtcctagatttaggctctgat-------ttggtctttatgtctttgttagatttatttattattgagattttatccatatgtcggga 219  Q
    ||||||| |||||||| || ||||||||||||||       |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  7273 atcgttttttggagtcttaaatttaggctctgattagaacgttggtctttatgtctttgttggatttatttattattgagattttatccatatgtcggaa 7174  T
Q  220 cttggagaatttatatgatgatgt 243  Q
     |||||||||||||||||||||||    
T  7173 tttggagaatttatatgatgatgt 7150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 243
Target Start/End: Original strand, 3324 - 3484
Alignment:
Q  89 tttggtgagtgcttggatagcgggagctaatctccgttatcgtttcttggagtcctagatttaggctctgatttgg-------tctttatgtctttgtta 181  Q
    ||||| || |||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||||||| ||| ||       ||||||||||||||||     
T  3324 tttggagattgcttggatagcggaagctaatctccgttatcgttccttggagtcttagatt-aggctctaattaggacgttgatctttatgtctttgttg 3422  T
Q  182 gatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||    
T  3423 gatttatttattattgagattttacccatatgtcgggatttgaagaatttatataatgatgt 3484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 23219288 - 23219195
Alignment:
Q  16 agcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgg 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||    
T  23219288 agcttacccccagcggttttgaccgcctacctgtttgtatgaatgggtagacagagtgcaggagtagtttgc--ttggtgagtgcttggatagcgg 23219195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 16131585 - 16131500
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  16131585 tgaagcttatccccagtggttttgaccacctacctgtttgtatgaatgggtagacgaagtgcaggattagtttgcttttggtgagt 16131500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 17375577 - 17375661
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  17375577 tgaagcttacccc-agtggttttgaccgcctacctgtttgtatgaatgggtagacgaagtgcaggattagtttgctttcggtgagt 17375661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 17858240 - 17858312
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagttt 85  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  17858240 tgaagcttacctccagtggttttgaccgcctacctgtttgtataaatgggtagacggagtgcaggagtagttt 17858312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 21929760 - 21929680
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||||||    
T  21929760 cttacctccagtggttttgaccgcctacctgtttgtatgaatgggtagacgaaatgcatgattagtttgctttcggtgagt 21929680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 4174571 - 4174643
Alignment:
Q  13 tgaagcttacccccagtggt-tttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  4174571 tgaagctaacccccagtggtctttgaccgcctacctgtttgtatggatgggtagacggcgtgcaggagtagtt 4174643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 22595511 - 22595593
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| | ||||||| ||| ||||||||| |||||    
T  22595511 aagcttacctccagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcaggattag-ttgcttttgatgagt 22595593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 29162764 - 29162846
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||||| |||| | ||||||| ||| |||||||||||||||    
T  29162764 aagcttacccccaatggttttgaccgcctacctgtctgtatggatgggtggacgaagtgcaggactag-ttgcttttggtgagt 29162846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 4230200 - 4230272
Alignment:
Q  13 tgaagcttacccccagtggt-tttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||  ||||| |||||||    
T  4230200 tgaagctaacccccagtggtctttgaccgcctacctgtttgtatggatgggtagacggcgtgcagaagtagtt 4230272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 34965249 - 34965173
Alignment:
Q  22 cccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||   |||| || |||||||||||||||||||    
T  34965249 cccccagtggttttgaccgcctacctgtctatatggatgggtagacgacgtgcaagattagtttgcttttggtgagt 34965173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 6092838 - 6092787
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  6092838 gcttacccccagtgattttgaccgcctacctgtctgtatgaatgggtagacg 6092787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 16889662 - 16889729
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagttt 85  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||   ||||||| ||||||    
T  16889662 cttacccccagtggttttgaccgcctacctgcctgtatgaatgggtagacgttgtgcaggattagttt 16889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 25917976 - 25917910
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||   |||||||||||||    
T  25917976 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacgctgtgcaggagtagtt 25917910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 33540087 - 33540140
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||||||||    
T  33540087 aagcttacgcccagtggttttgaccgcctacctgtctgtatggatgggtagacg 33540140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 15006503 - 15006620
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcggga 113  Q
    |||||||||||||| |||||||||||||||| ||| |||| | ||| ||||||| | |||| || ||| |||||||| ||||| ||||||||||||||||    
T  15006503 aagcttacccccagaggttttgaccgcctacatgtctgtacggatgagtagacgaagtgcatgattag-ttgctttt-gtgagttgcttggatagcggga 15006600  T
Q  114 gctaatctccgttatcgtttc 134  Q
     || |||||| ||||||||||    
T  15006601 cct-atctccattatcgtttc 15006620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 940982 - 941033
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  940982 gcttacccccagtgattttgaccgcctacctgtctgtatggatgggtagacg 941033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 14150891 - 14150840
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  14150891 gcttacccccagtggttttgaccgcctatctgtctgtatggatgggtagacg 14150840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 17085412 - 17085463
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  17085412 gcttacccccagtggttttgaccacctacctgtctgtatggatgggtagacg 17085463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 22467957 - 22468039
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagt 98  Q
    |||||||||| |||||||||||||||||||||| | |||||| ||||||||||| | |||| || ||| ||| |||||||||||    
T  22467957 aagcttaccctcagtggttttgaccgcctacctatctgtatggatgggtagacgaagtgcatgattag-ttgattttggtgagt 22468039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 7829769 - 7829819
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| | |||||||||||||||||||||||||||| |||||||||||    
T  7829769 cttacccctaatggttttgaccgcctacctgtttgtatggatgggtagacg 7829819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 21621421 - 21621371
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  21621421 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 21621371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 17787741 - 17787676
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||| ||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  17787741 cttacccccaatggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 17787676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 19852584 - 19852531
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  19852584 aagcttacccctagtggttttgaccgcctacctatctgtatggatgggtagacg 19852531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 19985101 - 19985166
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| |||||||||| || |||||| |||||||||||   ||||||||||||    
T  19985101 cttacccccagtggttttaaccgcctacccgtctgtatggatgggtagacgttttgcaggagtagt 19985166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 25746165 - 25746230
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||| ||| |||||| |||||||||||   ||||||||||||    
T  25746165 cttacccccagtggttttaaccgcctacatgtctgtatggatgggtagacgttgtgcaggagtagt 25746230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 12310862 - 12310929
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagttt 85  Q
    ||||||| ||||||||||||||||||||||||  ||||| |||||||||||   ||||||| ||||||    
T  12310862 cttaccctcagtggttttgaccgcctacctgtcggtatggatgggtagacgttgtgcaggattagttt 12310929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 25649568 - 25649517
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||||||||||||| ||| || |||||||||||    
T  25649568 gcttacccctagtggttttgaccgcctacctgtctgtttggatgggtagacg 25649517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 18740633 - 18740575
Alignment:
Q  25 ccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  18740633 ccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 18740575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 32896277 - 32896227
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||||||    
T  32896277 cttatccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 32896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 15080708 - 15080753
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||    
T  15080708 ccccagtggttttaaccgcctacctgtctgtatggatgggtagacg 15080753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 22428464 - 22428419
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||    
T  22428464 ccccagtggttttaaccgcctacctgtctgtatggatgggtagacg 22428419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 22846439 - 22846386
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| ||| ||||||||||||||||||||| | |||||| |||||||||||    
T  22846439 aagcttatcccaagtggttttgaccgcctacctatctgtatggatgggtagacg 22846386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 25646791 - 25646839
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||    
T  25646791 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtaga 25646839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 23151699 - 23151636
Alignment:
Q  20 tacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||| ||||||||||||| | |||| ||||||| |||   ||||||||||||    
T  23151699 tacccccagtggttttaaccgcctacctgtctatatggatgggtaaacgttgtgcaggagtagt 23151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 16104845 - 16104795
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| | ||||||||||| |||||| |||||||||||    
T  16104845 cttacccctagtggttttaatcgcctacctgtctgtatggatgggtagacg 16104795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 18383529 - 18383579
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  18383529 cttaacccgagtggttttaaccgcctacctgtctgtatggatgggtagacg 18383579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 22866403 - 22866353
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||| ||||||||| ||||||  ||||||||||    
T  22866403 cttacccctagtggttttgacctcctacctgtctgtatgggtgggtagacg 22866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 31469393 - 31469455
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    ||||||||||| ||| ||||||||||||||||||| | |||| ||| ||||||| | ||||||    
T  31469393 aagcttacccctagtagttttgaccgcctacctgtctctatggatgagtagacgaagtgcagg 31469455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 14487456 - 14487497
Alignment:
Q  37 accgcctacctgtttgtatgaatgggtagacggaatgcagga 78  Q
    ||||||||||| |||||||||||||||||||||  |||||||    
T  14487456 accgcctacctatttgtatgaatgggtagacggcgtgcagga 14487497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 18775493 - 18775436
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||||| ||||||||||||| | |||| |||||||||||   |||||||||||||    
T  18775493 agtggttttaaccgcctacctgtctatatggatgggtagacgttgtgcaggagtagtt 18775436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 33323031 - 33322990
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggta 64  Q
    ||||||||||||||||||||||| ||| |||||| |||||||    
T  33323031 ccccagtggttttgaccgcctacatgtctgtatggatgggta 33322990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 13016711 - 13016771
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||||||   ||||||||||||    
T  13016711 ccccagtggttttaaccgtttacctgtctgtatggatgggtagacgttgtgcaggagtagt 13016771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 22595605 - 22595640
Alignment:
Q  98 tgcttggatagcgggagctaatctccgttatcgtttc 134  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22595605 tgcttggatagcgggagct-atctccgttatcgtttc 22595640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 121841 - 121928
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgagtgcttggatagcgggagct 116  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||  ||||| |||||||||||||||||||||    
T  121841 agtggttttgaccgcctacctgtttgtatgaatgggtagaaggagtgcaggaatagtttgc--ttggttagtgcttggatagcgggagct 121928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 53926 - 53861
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  53926 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 53861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 106470 - 106521
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| ||||||||||||||||||| |||||  |||||||||||    
T  106470 gcttacccccagtagttttgaccgcctacctgtctgtattgatgggtagacg 106521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 37042 - 37118
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt 89  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||    
T  37042 tgaagcttacccccagtagttttgaccgcctgcctatttgtatgaatgggtagacggagtgcaggagtagtttgctt 37118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 12497 - 12573
Alignment:
Q  167 tttatgtctttgttagatttatttattattgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||||||||    
T  12497 tttatgtctttgttggatttatttattattgagattttacccatatgccgggattttgagaatttatatgatgatgt 12573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 22431 - 22507
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgctt 89  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22431 tgaagcttacccctagtggttttgattgcctacctgtttgtatgaaagggtagacggagtgcaggagtagtttgctt 22507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 895 - 844
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    |||||||| |||||||||||||||||||||||||| | | || |||||||||    
T  895 aagcttacacccagtggttttgaccgcctacctgtctttgtggatgggtaga 844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 84731 - 84614
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcggga 113  Q
    ||||||||||  |||||||||||||||||||| || |||||| ||||||||||| | ||||||| ||| |||| ||||||||| ||||||||||||||||    
T  84731 aagcttaccctaagtggttttgaccgcctacccgtctgtatggatgggtagacgaagtgcaggattag-ttgc-tttggtgagttgcttggatagcggga 84634  T
Q  114 gctaatctccgttatcgtttc 134  Q
    ||| |||||||||||||||||    
T  84633 gct-atctccgttatcgtttc 84614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 25872 - 25822
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||||    
T  25872 cttacccccagtggttttgaccgcctacatgtctgtatggatgggtagacg 25822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 4263 - 4179
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtag-tttgcttttggtgagt 98  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||    
T  4263 aagctaacccccagtggttctgactgcctacctgtttgtatgaatgggtaaacggagtgcaggagtagttttgctttcggtgagt 4179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 1838 - 1947
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcgggagctaatct 121  Q
    |||||| |||||||||||||||||| | |||||| || |||||||| | ||||||| ||| |||| ||||||||| ||||||||||||||||||| ||||    
T  1838 ccccagaggttttgaccgcctacctatctgtatggataggtagacgaagtgcaggattag-ttgc-tttggtgagttgcttggatagcgggagct-atct 1934  T
Q  122 ccgttatcgtttc 134  Q
    |||||||||||||    
T  1935 ccgttatcgtttc 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 161
Target Start/End: Complemental strand, 12113 - 11982
Alignment:
Q  34 ttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt--tgctt--ttggtgagtgcttggatagcgggagctaatctccgttatc 129  Q
    |||||||| ||||| ||||||||||||  |||||||  |||||||||||||  || ||  ||||||||||||||||||||||||||| ||||||||| ||    
T  12113 ttgaccgcatacctatttgtatgaatgtttagacggcgtgcaggagtagttgttgattgcttggtgagtgcttggatagcgggagct-atctccgttgtc 12015  T
Q  130 gtttc--ttggagtcctagatttaggctctgatt 161  Q
    |||||  |||||||| |||| |||||||||||||    
T  12014 gtttcctttggagtcttaga-ttaggctctgatt 11982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 13240 - 13323
Alignment:
Q  13 tgaagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtga 96  Q
    ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| | || || | ||||||||||| |||||    
T  13240 tgaagcttacccatagtggttttgaccgcctacctgtctgtatgaatgggtagacgaagtgtagaaatagtttgctttcggtga 13323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 114157 - 114221
Alignment:
Q  20 tacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||   |||||||||||||    
T  114157 tacccccagtggttttgaccgcctacctatttgtatggatgggtagacgatgtgcaggagtagtt 114221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 107904 - 107854
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  107904 cttacccccaatggttttgaccgcctacctgtctgtattaatgggtagacg 107854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 130191 - 130147
Alignment:
Q  24 cccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  130191 cccagtggttttgaccgcctacctgtctgtatggatgggtagacg 130147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 106760 - 106810
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||| || |||||||||||||||||| || ||| |||||||||||    
T  106760 cttacccccaatgattttgaccgcctacctgtctgcatggatgggtagacg 106810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 9680 - 9629
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  9680 gcttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 9629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 6045 - 5986
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||    
T  6045 cttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcagg 5986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 14159 - 14209
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14159 cttacccccagtggttttgaccgcctacctgtatgtatggatgggtagacg 14209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 5840 - 5790
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  5840 cttatccccagtggttttgaccgcctacctgtctgtatgaatgggtagacg 5790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 18945 - 18887
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||    
T  18945 ttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacgaagtgcagg 18887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 24288 - 24335
Alignment:
Q  21 acccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  24288 acccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 24335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 1312 - 1377
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  1312 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 1377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 2889 - 3003
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttgcttttggtgag-tgcttggatagcggga 113  Q
    ||||||||||| |||| |||||||||||||||||| || ||| ||||||||| | | ||||||  ||| |||| |||| |||| ||||||||||||||||    
T  2889 aagcttacccctagtgattttgaccgcctacctgtatggatggatgggtagatgaagtgcagggttag-ttgc-tttgatgagttgcttggatagcggga 2986  T
Q  114 gctaatctccgttatcgt 131  Q
    ||| ||||||||||||||    
T  2987 gct-atctccgttatcgt 3003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 99051 - 99100
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  99051 ttacccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 99100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 30309 - 30259
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||| ||||||||||| |||||| |||||||||||    
T  30309 cttacccctagtggttttgatcgcctacctgtctgtatggatgggtagacg 30259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 68589 - 68539
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||| |||||||||| | |||| |||||||||||    
T  68589 cttacccccagtggttttgactgcctacctgtctatatggatgggtagacg 68539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 249399 - 249464
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  249399 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 249464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 15722 - 15790
Alignment:
Q  13 tgaagcttacccccagtggt-tttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagt 80  Q
    ||||||| ||||||| |||| ||||||| |||||||||||||||||||||||||||||  |||||||||    
T  15722 tgaagctaacccccaatggtctttgaccacctacctgtttgtatgaatgggtagacggcgtgcaggagt 15790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 1565 - 1514
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  1565 gcttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 1514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 2902 - 2835
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagttt 85  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||   ||||||| ||||||    
T  2902 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacgttgtgcaggattagttt 2835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 31508 - 31571
Alignment:
Q  21 acccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||   | |||||||||||    
T  31508 acccccagtggttttgaccgcctacctgtctgtatggatgggtagacgttgttcaggagtagtt 31571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 5260 - 5310
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||| ||||||||||||||||||||| |||||| |||||||||||    
T  5260 cttacccccaatggttttgaccgcctacctgtctgtatggatgggtagacg 5310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 6747 - 6805
Alignment:
Q  19 ttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcagg 77  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||| | ||||||    
T  6747 ttacccccagtggttttgaccacctacctgtctgtatggatgggtagacgaagtgcagg 6805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 4317 - 4274
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    ||||||||||||||||||||||||||| |||||| |||||||||    
T  4317 ccccagtggttttgaccgcctacctgtctgtatggatgggtaga 4274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 19497 - 19559
Alignment:
Q  21 acccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  19497 acccccagtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 19559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 8382 - 8316
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    |||||||||| ||||||||||||||||||||| |||||| ||| |||||||   |||||||||||||    
T  8382 cttacccccaatggttttgaccgcctacctgtctgtatggatgagtagacgctgtgcaggagtagtt 8316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 3564 - 3614
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||||    
T  3564 cttacccccagtggttttgaccgcctacatgtctgtatggatgggtagacg 3614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 7294 - 7244
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  7294 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 7244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 11753 - 11703
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  11753 gcttacccccaatggttttgaccgcctacctgtctgtatggatgggtagac 11703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 59860 - 59810
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  59860 cttacccctagtggttttgaccgcctacctgtctgtatggatgggtagacg 59810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 51627 - 51577
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  51627 cttacccctagtggttttaaccgcctacctgtctgtatgaatgggtagacg 51577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 5054 - 5009
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  5054 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 5009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 899 - 854
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  899 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 6972 - 6927
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||    
T  6972 ccccagtggttttgaccgcctacctgtctgtatggatgggtagacg 6927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 25830 - 25875
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||    
T  25830 ccccagtggttttgaccgcctacctgttggtatggatgggtagacg 25875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 21362 - 21297
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||||||||||||  |||||| |||||||||||   ||||||||||||    
T  21362 cttacccccagtggttttaaccgcctacctgactgtatggatgggtagacgttgtgcaggagtagt 21297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 138678 - 138727
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  138678 cttacccccagtggttttaaccgcctacctgtctgtatggatgggtagac 138727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 19668 - 19720
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  19668 aagcttacccctagtggttttgaccgcctagctgtctgtatggatgggtagac 19720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 29244 - 29296
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||| |||||||||||||||||| |||| |||||| ||||||||||    
T  29244 aagcttacccctagtggttttgaccgcctagctgtctgtatggatgggtagac 29296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 9871 - 9821
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| |||||||||| |||||||||||| |||||| |||||||||||    
T  9871 cttacccctagtggttttggccgcctacctgtctgtatggatgggtagacg 9821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 104275 - 104222
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||  ||||||||||||||||||||||||| |||||| |||||||||||    
T  104275 aagcttacttccagtggttttgaccgcctacctgtctgtatggatgggtagacg 104222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 99447 - 99378
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    |||||||  |||||||||||||||||||||||||  |||||| ||||||||||| | ||||||| |||||    
T  99447 aagcttaatcccagtggttttgaccgcctacctgcctgtatgcatgggtagacgaagtgcaggattagtt 99378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 217640 - 217705
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||| |||||||| |||||||| |||| |||||| |||||||||||   ||||||||||||    
T  217640 cttaccccccgtggttttaaccgcctatctgtctgtatggatgggtagacgttgtgcaggagtagt 217705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0613 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0613
Description:

Target: scaffold0613; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 2961 - 3005
Alignment:
Q  34 ttgaccgcctacctgtttgtatgaatgggtagacggaatgcagga 78  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||    
T  2961 ttgaccgcctacctatttgtatgaatgggtagacggcatgcagga 3005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 7124 - 7184
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  7124 ccccagtggttttaaccgcctacctgtctgtatggatgggtagacgctgtgcaggagtagt 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 247678 - 247775
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt--ttgctt--ttggtgagtgcttggatagcgggagctaatctccgttatcg 130  Q
    |||||||||||| |||||||||||||||||||||  ||||||||| ||  ||| ||  ||||| |||||| |||||||||||||| |||| ||||||||    
T  247678 gaccgcctacctatttgtatgaatgggtagacggcgtgcaggagttgttgttggttgcttggtaagtgctcggatagcgggagct-atcttcgttatcg 247775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 12508 - 12559
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| ||||||||||||||||| ||| |||||| |||||||||||    
T  12508 gcttacccccactggttttgaccgcctacatgtctgtatggatgggtagacg 12559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 2938 - 2989
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  2938 gcttacccctagtggttttgaccgcttacctgtctgtatggatgggtagacg 2989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 11193 - 11244
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||||| ||||||| |||||| |||||||||||    
T  11193 gcttacccctagtggttttgaccgcttacctgtctgtatggatgggtagacg 11244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 3585 - 3542
Alignment:
Q  25 ccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  3585 ccagtggttttgaccgcctacctgtctgtatggatgggtagacg 3542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 70161 - 70212
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||| ||||||||||||||||||||  |||||| |||||||||||    
T  70161 gcttacccccattggttttgaccgcctacctgactgtatggatgggtagacg 70212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 29420 - 29369
Alignment:
Q  17 gcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||||||| | |||||| || ||||||||    
T  29420 gcttacccccagtggttttgaccgcctacctatctgtatggataggtagacg 29369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 6097 - 6047
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||||||| |||| |||||| |||| ||||||    
T  6097 cttacccccagtggttttgaccgcctaactgtctgtatggatggttagacg 6047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 4415 - 4373
Alignment:
Q  24 cccagtggttttgaccgcctacctgtttgtatgaatgggtaga 66  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  4415 cccagtggttttgaccgcctacctgtctgtatggatgggtaga 4373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 26868 - 26818
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  26868 cttacccctagtggttttaaccgcctacctgtctgtatggatgggtagacg 26818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 37755 - 37705
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||||||    
T  37755 cttaccccaagtggttttaaccgcctacctgtctgtatggatgggtagacg 37705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 117
Target Start/End: Original strand, 64372 - 64462
Alignment:
Q  34 ttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt---ttgctt--ttggtgagtgctt--ggatagcgggagcta 117  Q
    |||||||||||||| ||||||||||||||||||| |  ||||||| ||||   ||||||  |||||||||||||  |||||||||||||||    
T  64372 ttgaccgcctacctatttgtatgaatgggtagacagcgtgcaggaatagtgtattgcttgcttggtgagtgcttgaggatagcgggagcta 64462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 92247 - 92197
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||||||||||| || |||||||||| |||||| |||||||||||    
T  92247 cttacccccagtggttttaactgcctacctgtctgtatggatgggtagacg 92197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1610 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1610
Description:

Target: scaffold1610; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 119 - 184
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||| ||||||||| ||||||||||| | |||||| |||||||||||   ||||||||||||    
T  119 cttacccctagtggttttaaccgcctacctctctgtatggatgggtagacgttgtgcaggagtagt 184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1605 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1605
Description:

Target: scaffold1605; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 1460 - 1395
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||| ||||||||| ||||||||||| | |||||| |||||||||||   ||||||||||||    
T  1460 cttacccctagtggttttaaccgcctacctctctgtatggatgggtagacgttgtgcaggagtagt 1395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 6878 - 6837
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  6878 agtggttttgaccgcctacctgtctgtatggatgggtagacg 6837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 7292 - 7357
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||| |||||||| || |||||||||| |||||| |||||||||||   ||||||||||||    
T  7292 cttacccccggtggttttaactgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 7357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 36217 - 36148
Alignment:
Q  15 aagcttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    |||||||| | |||||||||||||||||||| | | |||||| ||||||||||| | ||||||| |||||    
T  36217 aagcttactctcagtggttttgaccgcctacatttctgtatggatgggtagacgaagtgcaggattagtt 36148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 37622 - 37557
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||||||||||||| ||| ||||||||| |||||| ||||||| |||   ||||||||||||    
T  37622 cttacccccagtggttttaaccacctacctgtctgtatggatgggtaaacgttgtgcaggagtagt 37557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 1643 - 1598
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||    
T  1643 ccccagttgttttgaccgcctacctgtctgtatggatgggtagacg 1598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 144978 - 144933
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||    
T  144978 ccccagtggttttaaccgcctacctgtctgtatggatgggtagacg 144933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 125303 - 125368
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||| |||| ||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  125303 cttacacccaatggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 125368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 72322 - 72371
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||| ||| ||||| ||||||||||||| |||||| ||||||||||    
T  72322 cttacccctagttgttttaaccgcctacctgtctgtatggatgggtagac 72371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 76703 - 76752
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    |||||||| ||| ||||| ||||||||||||| |||||| ||||||||||    
T  76703 cttacccctagttgttttaaccgcctacctgtctgtatggatgggtagac 76752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 256832 - 256897
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    |||||||| ||||||||| ||| ||||||| | |||||| |||||||||||   ||||||||||||    
T  256832 cttacccctagtggttttaaccacctacctatctgtatggatgggtagacgttgtgcaggagtagt 256897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 20855 - 20810
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggt 63  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||    
T  20855 cttacccccagtgcttttgaccgcctacctgtctgtatggatgggt 20810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 17513 - 17457
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagt 83  Q
    ||||||||| ||||||||||||| |||||| |||||||||||   ||||||||||||    
T  17513 agtggttttaaccgcctacctgtctgtatggatgggtagacgttgtgcaggagtagt 17457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 12479 - 12435
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||||||||||||||||||| | |||| ||||||||||    
T  12479 ccccagtggttttgaccgcctacctgtctctatggatgggtagac 12435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 5627 - 5577
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtttg 86  Q
    |||||||||||| |||||||||||||||||||||  |||| || |||||||    
T  5627 gaccgcctacctatttgtatgaatgggtagacggcgtgcatgattagtttg 5577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 3400 - 3448
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagac 67  Q
    ||||||||||||| ||||||| ||||||||| ||||||| ||||||||||    
T  3400 cttacccccagtgattttgacggcctacctg-ttgtatggatgggtagac 3448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 4730 - 4780
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||| ||||||||| ||||||||||||| | |||| |||||||||||    
T  4730 cttacccctagtggttttaaccgcctacctgtctatatggatgggtagacg 4780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 13745 - 13791
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggta 64  Q
    |||||||| ||||||||| ||||||||||||| |||||| |||||||    
T  13745 cttacccctagtggttttaaccgcctacctgtctgtatggatgggta 13791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 20433 - 20387
Alignment:
Q  22 cccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||||| ||| ||||||||||||| |||||| |||||||||||    
T  20433 cccccagtggattttaccgcctacctgtctgtatggatgggtagacg 20387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 40974 - 40924
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||| ||||||||||||| ||||||||||| | |||||| |||||||||||    
T  40974 cttatccccagtggttttaaccgcctacctatctgtatggatgggtagacg 40924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 7494 - 7544
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||| || ||||||||| |||||||||||||||||| || ||||||||    
T  7494 cttaccctcaatggttttgatcgcctacctgtttgtatggataggtagacg 7544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 26665 - 26715
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    |||||||  ||||||||| ||||||||||||| |||||| |||||||||||    
T  26665 cttaccctgagtggttttaaccgcctacctgtctgtatggatgggtagacg 26715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 66605 - 66646
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||| ||||||||||||| |||||| |||||||||||    
T  66605 agtggttttaaccgcctacctgtctgtatggatgggtagacg 66646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 33792 - 33742
Alignment:
Q  18 cttacccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||| |||||| ||| |||||| || ||||||||    
T  33792 cttacccccagtggttttgactgcctacatgtctgtatggattggtagacg 33742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 4069 - 4024
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||| ||||||||| | |||| |||||||||||    
T  4069 ccccagtggttttgaccacctacctgtctatatggatgggtagacg 4024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 4585 - 4544
Alignment:
Q  195 ttgagattttatccatatgtcgggacttggagaatttatatg 236  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  4585 ttgagattttacccatatgtcgggatttggagattttatatg 4544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 7054 - 7095
Alignment:
Q  27 agtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  7054 agtggttttgaccgcctacctgtctgtatagatgggtagacg 7095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 199233 - 199278
Alignment:
Q  23 ccccagtggttttgaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||  ||||||||| |||||| |||||||||||    
T  199233 ccccagtggttttgacatcctacctgtctgtatggatgggtagacg 199278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 141148 - 141201
Alignment:
Q  31 gttttgaccgcctacctgtttgtatgaatgggtagacggaatgcaggagtagtt 84  Q
    ||||||||| |||||||||||||||| ||||| ||||| | ||||||| |||||    
T  141148 gttttgaccacctacctgtttgtatggatgggcagacgaagtgcaggattagtt 141201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 8379 - 8331
Alignment:
Q  195 ttgagattttatccatatgtcgggacttggagaatttatatgatgatgt 243  Q
    ||||||| ||| ||||||||||||| ||||||| |||||||| ||||||    
T  8379 ttgagatattacccatatgtcgggatttggagattttatatggtgatgt 8331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 94238 - 94206
Alignment:
Q  36 gaccgcctacctgtttgtatgaatgggtagacg 68  Q
    ||||||||||||||||||||| |||||||||||    
T  94238 gaccgcctacctgtttgtatggatgggtagacg 94206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University