View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16213_high_4 (Length: 496)
Name: NF16213_high_4
Description: NF16213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16213_high_4 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 393; Significance: 0; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 17 - 485
Target Start/End: Original strand, 27432685 - 27433153
Alignment:
| Q |
17 |
tggagctctgaaggacacacaacatttatgttcccaggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
116 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27432685 |
tggagctctgaagggcacacaacattaatgttccctggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
27432784 |
T |
|
| Q |
117 |
atccatccacattgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccgttgca |
216 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
27432785 |
atccatccacattgctcacatcatagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccgttaca |
27432884 |
T |
|
| Q |
217 |
accgagttgaccagaggcacaatcggcagtggcacagctgaactttccattgttgtctgagcatccagttcggccccaaaatcttcccgaccatggtgat |
316 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||| ||||| |||||||||| ||||||||||||||| |
|
|
| T |
27432885 |
accgacttgaccagaggcacaatcggcggtggcacaactgaactttccattgttgttggagcatccggttcgtccccaaaatcgacccgaccatggtgat |
27432984 |
T |
|
| Q |
317 |
ggaaggtccaccgcaattgttgctccaggtcctaactcaaaacccgtcgttgatagctgaggtttttggtctccagttaacgttcctggccatacagtgt |
416 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27432985 |
ggaaggtccacctcaattgttgctccaggtcctaactcaaaacccgttgttgatagctgaggcttttggtctccagttaacgttcccggccatacagtgt |
27433084 |
T |
|
| Q |
417 |
attcacacctatttgtgaatgtcaccttagctcctccaaccactgcatacaaatgcaaaatacgttcat |
485 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
27433085 |
attcacacctatttgtgaatgtcaccttagctcctccaaccgctgcatacaaatgcaaaatacgttcat |
27433153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 17 - 485
Target Start/End: Original strand, 27207605 - 27208073
Alignment:
| Q |
17 |
tggagctctgaaggacacacaacatttatgttcccaggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
116 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||| |||| ||||| ||||| |||| |
|
|
| T |
27207605 |
tggagctctgaaggacacacaacattaatgttcctaggacaactagcggttttgcagtcaccactcccaccttgtggcattacggacatgggcacattga |
27207704 |
T |
|
| Q |
117 |
atccatccacattgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccgttgca |
216 |
Q |
| |
|
| ||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
27207705 |
acccatcaacattgctcacatcgtagaaatcttgtcccccgttggatgctattgttatttctaccagtgttgctggtgggattgcgccagcaccgttgca |
27207804 |
T |
|
| Q |
217 |
accgagttgaccagaggcacaatcggcagtggcacagctgaactttccattgttgtctgagcatccagttcggccccaaaatcttcccgaccatggtgat |
316 |
Q |
| |
|
||||| |||||| |||||||||||||| ||||| ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27207805 |
accgacttgaccggaggcacaatcggcggtggcgcagctgaaccttccgttgttgtcggagcatccagttcggccccaaaatcttcccgaccatggtgat |
27207904 |
T |
|
| Q |
317 |
ggaaggtccaccgcaattgttgctccaggtcctaactcaaaacccgtcgttgatagctgaggtttttggtctccagttaacgttcctggccatacagtgt |
416 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27207905 |
ggaaggtccaccgcaattgttgctccaggtcctaactcaaaacccgttgtcgatagctgaggtttttggtctccagttaacgttcctggccatacagtgt |
27208004 |
T |
|
| Q |
417 |
attcacacctatttgtgaatgtcaccttagctcctccaaccactgcatacaaatgcaaaatacgttcat |
485 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27208005 |
atgcacacctatttgtgaatgtcaccttagctcctccaaccactgcatacaaatgaaaaatacgttcat |
27208073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 17 - 465
Target Start/End: Original strand, 27214976 - 27215424
Alignment:
| Q |
17 |
tggagctctgaaggacacacaacatttatgttcccaggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
116 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27214976 |
tggagctctgaaggacacacaacattgatgttccctggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
27215075 |
T |
|
| Q |
117 |
atccatccacattgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccgttgca |
216 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27215076 |
atccatccacattgctcacatcatagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccattgca |
27215175 |
T |
|
| Q |
217 |
accgagttgaccagaggcacaatcggcagtggcacagctgaactttccattgttgtctgagcatccagttcggccccaaaatcttcccgaccatggtgat |
316 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||| |
|
|
| T |
27215176 |
accgagttgaccagaggcacaatcggcggtggcacagctgaactttccattgttgttgaagcatccggttcggccccaaaatcgaccagaccatggtgat |
27215275 |
T |
|
| Q |
317 |
ggaaggtccaccgcaattgttgctccaggtcctaactcaaaacccgtcgttgatagctgaggtttttggtctccagttaacgttcctggccatacagtgt |
416 |
Q |
| |
|
||||||||||| | ||| || |||||| ||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27215276 |
ggaaggtccactgaaatagtaactccagatcccaactcgaaacctgtcgttgatagctgaggtttttggtctccggttaacgttcctggccatacagtgt |
27215375 |
T |
|
| Q |
417 |
attcacacctatttgtgaatgtcaccttagctcctccaaccactgcata |
465 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27215376 |
attcacacctatttgtgaacgtcaccttagctcctccaaccactgcata |
27215424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 17 - 465
Target Start/End: Complemental strand, 27443925 - 27443477
Alignment:
| Q |
17 |
tggagctctgaaggacacacaacatttatgttcccaggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
116 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27443925 |
tggagctctgaaggacacacaacattgatgttccctggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
27443826 |
T |
|
| Q |
117 |
atccatccacattgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccgttgca |
216 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
27443825 |
atccatccacattgctcacatcttagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccattgca |
27443726 |
T |
|
| Q |
217 |
accgagttgaccagaggcacaatcggcagtggcacagctgaactttccattgttgtctgagcatccagttcggccccaaaatcttcccgaccatggtgat |
316 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| || |||||||||||| |
|
|
| T |
27443725 |
accgagttgaccagaggcacaatcggcggtggcacagctgaactttccattgttgttgaagcatccggttcggccccaaaatcgaccagaccatggtgat |
27443626 |
T |
|
| Q |
317 |
ggaaggtccaccgcaattgttgctccaggtcctaactcaaaacccgtcgttgatagctgaggtttttggtctccagttaacgttcctggccatacagtgt |
416 |
Q |
| |
|
||||||||||| | ||| || |||||| ||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27443625 |
ggaaggtccactgaaatagtaactccagatcccaactcgaaacctgtcgttgatagctgaggtttttggtctccggttaacgttcctggccatacagtgt |
27443526 |
T |
|
| Q |
417 |
attcacacctatttgtgaatgtcaccttagctcctccaaccactgcata |
465 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
27443525 |
attcacacctatttgtgaacgtcaccttagctcctccaacaactgcata |
27443477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 17 - 465
Target Start/End: Original strand, 27220938 - 27221386
Alignment:
| Q |
17 |
tggagctctgaaggacacacaacatttatgttcccaggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
116 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27220938 |
tggagctctgaagggcacacaacattaatgttccctggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttga |
27221037 |
T |
|
| Q |
117 |
atccatccacattgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccgttgca |
216 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27221038 |
atccgtccacattgctcacatcgtagaagtcttgtcccccgtctgttgctaccgttatttctaccaatgttgctggtgggattgccccagcaccgttgca |
27221137 |
T |
|
| Q |
217 |
accgagttgaccagaggcacaatcggcagtggcacagctgaactttccattgttgtctgagcatccagttcggccccaaaatcttcccgaccatggtgat |
316 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
27221138 |
accgacttgaccagaggcacaatcggcggtggcacagctgaactttccattgttgttgaagcatccggttcggccccaaaatctacccgaccatggtgat |
27221237 |
T |
|
| Q |
317 |
ggaaggtccaccgcaattgttgctccaggtcctaactcaaaacccgtcgttgatagctgaggtttttggtctccagttaacgttcctggccatacagtgt |
416 |
Q |
| |
|
||||||||||| | ||| || |||||| ||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27221238 |
ggaaggtccactgaaatagtaactccagatcccaactcgaaacctgtcgttgatagctgaggtttttggtctccggttaacgttcctggccatacagtgt |
27221337 |
T |
|
| Q |
417 |
attcacacctatttgtgaatgtcaccttagctcctccaaccactgcata |
465 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
27221338 |
attcacacctatttgtgaaagtcaccttagctcctccaaccactgcata |
27221386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 53 - 469
Target Start/End: Original strand, 27388935 - 27389351
Alignment:
| Q |
53 |
ggacaactggaggttttgcagtcaccactcccaccttgtggcgttacagacattggcacgttgaatccatccacattgctcacatcgtagaaatcttgtc |
152 |
Q |
| |
|
||||| || |||| |||||| || ||||| || |||||||| ||||| ||||||||||||||||| || || || ||||||||||||||||||||||||| |
|
|
| T |
27388935 |
ggacagctagaggatttgcaatcgccacttccgccttgtggagttacggacattggcacgttgaaaccgtcaacgttgctcacatcgtagaaatcttgtc |
27389034 |
T |
|
| Q |
153 |
ccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccgttgcaaccgagttgaccagaggcacaatcggcagtggcaca |
252 |
Q |
| |
|
| || |||| ||| || || ||||| ||||| |||||||||||||||||||||||||| ||||| | | ||||||||| |||||||||||||||||||| |
|
|
| T |
27389035 |
ctccatttgatgccactgtaatttcaaccaaagttgctggtgggattgcgccagcaccattgcatgcaacttgaccagatgcacaatcggcagtggcaca |
27389134 |
T |
|
| Q |
253 |
gctgaactttccattgttgtctgagcatccagttcggccccaaaatcttcccgaccatggtgatggaaggtccaccgcaattgttgctccaggtcctaac |
352 |
Q |
| |
|
| |||| ||| |||||| ||||||||| |||||| ||||||||| || |||||||| || |||| ||| | | | |||||||||||||||||| |
|
|
| T |
27389135 |
agtaaactgtccgttgttggttgagcatccggttcgggcccaaaatcgacctgaccatggggaaggaatttccgctgagttcgttgctccaggtcctaac |
27389234 |
T |
|
| Q |
353 |
tcaaaacccgtcgttgatagctgaggtttttggtctccagttaacgttcctggccatacagtgtattcacacctatttgtgaatgtcaccttagctcctc |
452 |
Q |
| |
|
|| ||||| || |||||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||| ||||| |||||||| ||| | ||||||| |
|
|
| T |
27389235 |
tcgaaacctgttgttgatagctgaggtttttggtctccggttaaggttcctggccatacggtgtatccacatctattcgtgaatgttaccgtggctcctc |
27389334 |
T |
|
| Q |
453 |
caaccactgcatacaaa |
469 |
Q |
| |
|
| | ||||||||||| |
|
|
| T |
27389335 |
tagcagctgcatacaaa |
27389351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 81 - 469
Target Start/End: Original strand, 27409919 - 27410307
Alignment:
| Q |
81 |
tcccaccttgtggcgttacagacattggcacgttgaatccatccacattgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctac |
180 |
Q |
| |
|
||||||||||||| |||||| | |||||||||||||| || || || |||||||||||||||||||||||||| || |||| ||| | ||| ||||| || |
|
|
| T |
27409919 |
tcccaccttgtggagttacaaaaattggcacgttgaacccgtcaacgttgctcacatcgtagaaatcttgtcctccatttgatgccatggtaatttcaac |
27410018 |
T |
|
| Q |
181 |
caatgttgctggtgggattgcgccagcaccgttgcaaccgagttgaccagaggcacaatcggcagtggcacagctgaactttccattgttgtctgagcat |
280 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||| || | ||||||||| |||||||||| |||||||| || |||||| | |||||| ||||||| |
|
|
| T |
27410019 |
taaagttgctggtgggattgcgccagcaccattgcaccccacttgaccagacccacaatcggctgtggcacaactaaacttttctttgttgattgagcat |
27410118 |
T |
|
| Q |
281 |
ccagttcggccccaaaatcttcccgaccatggtgatggaaggtccaccgcaattgttgctccaggtcctaactcaaaacccgtcgttgatagctgaggtt |
380 |
Q |
| |
|
|| |||| ||||||||| || ||||||| || ||||||| ||||| || |||| |||| ||||||||||| || ||||||| ||||| |
|
|
| T |
27410119 |
ccggttcttgcccaaaatcgaccagaccatgaagaaggaaggttcaccgagtacgtcactccttgtcccaactcaaaacctgttgttgataattgagggg |
27410218 |
T |
|
| Q |
381 |
tttggtctccagttaacgttcctggccatacagtgtattcacacctatttgtgaatgtcaccttagctcctccaaccactgcatacaaa |
469 |
Q |
| |
|
|||| || ||| || ||||||||||||||||| ||| |||| ||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
27410219 |
tttgagctgtagtaaaggttcctggccatacagtatatccacatctattcgtgaatgtcaccttggctcctccaaccactgcatacaaa |
27410307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 275 - 478
Target Start/End: Original strand, 27455093 - 27455294
Alignment:
| Q |
275 |
gagcatccagttcggccccaaaatcttcccgaccatggtgatggaaggtccaccgcaattgttgctccaggtcctaactcaaaacccgtcgttgatagct |
374 |
Q |
| |
|
|||||||| ||||||| ||||||| || || |||||||||||||||||||| | ||| || ||| || ||| || || |||| |||||| |||||| |
|
|
| T |
27455093 |
gagcatccgattcggcctcaaaatcaacctgatcatggtgatggaaggtccactgaaatagta-ctctagatcccaagtcgaaacttgtcgttcatagct |
27455191 |
T |
|
| Q |
375 |
gaggtttttggtctccagttaacgttcctggccatacagtgtattcacacctatttgtgaatgtcaccttagctcctccaaccactgcatacaaatgcaa |
474 |
Q |
| |
|
|||||||||| |||| |||||||||| || | |||||| | ||||||||| |||| |||||||||||||||||||||||||| |||| || |||||||| |
|
|
| T |
27455192 |
gaggtttttg-tctctagttaacgtttctagtcatacaatttattcacacttattggtgaatgtcaccttagctcctccaactactgattagaaatgcaa |
27455290 |
T |
|
| Q |
475 |
aata |
478 |
Q |
| |
|
|||| |
|
|
| T |
27455291 |
aata |
27455294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 127 - 249
Target Start/End: Original strand, 27454712 - 27454834
Alignment:
| Q |
127 |
attgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattgcgccagcaccgttgcaaccgagttga |
226 |
Q |
| |
|
|||||||||||| ||||||||||||| || || || || || |||||||||||||||||||||||||||||||| || ||| | ||| |||| | |||| |
|
|
| T |
27454712 |
attgctcacatcatagaaatcttgtctcctgtctgatgtaaccgttatttctaccaatgttgctggtgggattgcacctgcatcattggaacccatttga |
27454811 |
T |
|
| Q |
227 |
ccagaggcacaatcggcagtggc |
249 |
Q |
| |
|
|| ||| ||||||||||||||| |
|
|
| T |
27454812 |
ccggagatacaatcggcagtggc |
27454834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 27415821 - 27415750
Alignment:
| Q |
398 |
gttcctggccatacagtgtattcacacctatttgtgaatgtcaccttagctcctccaaccactgcatacaaa |
469 |
Q |
| |
|
||||||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||| ||||| ||||| |
|
|
| T |
27415821 |
gttcctggccatacagtgtatacacatctattcgtgaatgtcaccttggctcctccaacctctgcagacaaa |
27415750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 20952648 - 20952716
Alignment:
| Q |
89 |
tgtggcgttacagacattggcacgttgaatccatccacattgctcacatcgtagaaatcttgtcccccg |
157 |
Q |
| |
|
|||||||||| ||||||| ||| ||||| | ||||||||||||||||| || ||||||||||||||| |
|
|
| T |
20952648 |
tgtggcgttattgacattgacacattgaacctgtccacattgctcacatcatataaatcttgtcccccg |
20952716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 298
Target Start/End: Complemental strand, 27416142 - 27415924
Alignment:
| Q |
81 |
tcccaccttgtggcgttacagacattggcacgttgaatccatccacattgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctac |
180 |
Q |
| |
|
|||||||| |||| |||||||| | |||||| ||||| |||| ||||||||| ||| ||||||||||| || |||| ||| || | || || || |
|
|
| T |
27416142 |
tcccacctcgtggagttacagatactggcacattgaacccataagtgttgctcacactgtataaatcttgtcctccatttgatgccactttaatgtcaac |
27416043 |
T |
|
| Q |
181 |
caatgttgctggtgggattgcgccagcaccgttgcaaccgagttgaccagaggcacaatcggcagtggcacagctgaactttccattgttgtctgagcat |
280 |
Q |
| |
|
|||||||||||||| ||| || ||||||| ||||| | | ||||||||| ||||||| | |||||||| || || ||||| || |||| ||||||| |
|
|
| T |
27416042 |
caatgttgctggtgtaattacgtcagcaccattgcactcaacttgaccagacccacaatcacctgtggcacaactaaaatttccgttattgtttgagcat |
27415943 |
T |
|
| Q |
281 |
ccag-ttcggccccaaaat |
298 |
Q |
| |
|
|| | ||||| |||||||| |
|
|
| T |
27415942 |
ccggtttcgggcccaaaat |
27415924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 41457895 - 41457747
Alignment:
| Q |
101 |
gacattggcacgttgaatccatccacattgctcacatcgtagaaatcttgtcccccgtttgttgctacggttatttctaccaatgttgctggtgggattg |
200 |
Q |
| |
|
||||| || |||||||| || || |||||||| | ||||||| | |||||||| ||||| | | ||||| || |||| | |||||||||||||| | || |
|
|
| T |
41457895 |
gacatgggtacgttgaacccgtcaacattgcttatatcgtagtagtcttgtccaccgttggcttctacgtgtagttctgctaatgttgctggtggaactg |
41457796 |
T |
|
| Q |
201 |
cgccagcaccgttgcaaccgagttgaccagaggcacaatcggcagtggc |
249 |
Q |
| |
|
| || ||||| |||||| ||| ||| || ||| ||||||| |||||||| |
|
|
| T |
41457795 |
caccggcaccattgcaagcgacttggccggagccacaatcagcagtggc |
41457747 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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