View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16216_high_13 (Length: 335)

Name: NF16216_high_13
Description: NF16216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16216_high_13
NF16216_high_13
[»] scaffold0295 (2 HSPs)
scaffold0295 (143-322)||(4790-4969)
scaffold0295 (148-260)||(5222-5334)
[»] chr5 (49 HSPs)
chr5 (143-322)||(18183338-18183517)
chr5 (144-322)||(2865124-2865302)
chr5 (146-322)||(5819298-5819474)
chr5 (146-322)||(8647438-8647614)
chr5 (146-322)||(19359136-19359312)
chr5 (143-322)||(15708968-15709146)
chr5 (144-322)||(24362205-24362383)
chr5 (144-322)||(8460928-8461106)
chr5 (143-322)||(15372242-15372421)
chr5 (145-322)||(29455111-29455288)
chr5 (142-318)||(14215616-14215792)
chr5 (143-322)||(164560-164739)
chr5 (143-306)||(8647822-8647986)
chr5 (144-306)||(5818927-5819090)
chr5 (144-306)||(18182968-18183131)
chr5 (144-306)||(19359520-19359683)
chr5 (144-311)||(14463901-14464067)
chr5 (145-306)||(8461315-8461477)
chr5 (148-306)||(2864756-2864915)
chr5 (145-322)||(16018588-16018763)
chr5 (146-305)||(164191-164350)
chr5 (148-306)||(14215243-14215402)
chr5 (143-306)||(24331556-24331722)
chr5 (148-322)||(24331929-24332107)
chr5 (152-306)||(24361843-24361997)
chr5 (145-308)||(25000471-25000635)
chr5 (152-306)||(24325218-24325372)
chr5 (145-306)||(29454739-29454901)
chr5 (144-308)||(16018969-16019134)
chr5 (146-288)||(7349420-7349562)
chr5 (168-322)||(25000112-25000266)
chr5 (146-306)||(15709353-15709513)
chr5 (148-271)||(15371873-15371995)
chr5 (147-272)||(4222142-4222266)
chr5 (146-286)||(4623148-4623286)
chr5 (146-272)||(7348559-7348685)
chr5 (152-284)||(6019177-6019309)
chr5 (146-284)||(4219663-4219800)
chr5 (147-263)||(6018315-6018430)
chr5 (159-285)||(4624631-4624757)
chr5 (197-288)||(13814131-13814226)
chr5 (145-308)||(41834443-41834606)
chr5 (228-272)||(14462686-14462730)
chr5 (245-322)||(16752680-16752757)
chr5 (144-197)||(15029804-15029857)
chr5 (138-199)||(15115585-15115646)
chr5 (144-221)||(22651782-22651859)
chr5 (265-322)||(24325580-24325637)
chr5 (245-322)||(28495211-28495288)
[»] chr3 (69 HSPs)
chr3 (146-322)||(39555946-39556122)
chr3 (144-322)||(31779021-31779199)
chr3 (144-322)||(5136978-5137156)
chr3 (142-320)||(20840556-20840734)
chr3 (145-322)||(23644461-23644638)
chr3 (149-322)||(41046703-41046876)
chr3 (143-322)||(24300925-24301104)
chr3 (145-322)||(37726928-37727105)
chr3 (148-322)||(25853596-25853770)
chr3 (145-322)||(27393946-27394123)
chr3 (146-315)||(43973441-43973610)
chr3 (143-322)||(30104479-30104657)
chr3 (146-320)||(32535330-32535508)
chr3 (143-301)||(48452986-48453144)
chr3 (150-322)||(22425182-22425354)
chr3 (143-322)||(26837725-26837903)
chr3 (143-306)||(43973824-43973988)
chr3 (146-306)||(37727314-37727475)
chr3 (143-322)||(26274936-26275114)
chr3 (145-322)||(17464860-17465038)
chr3 (145-306)||(20840945-20841107)
chr3 (145-306)||(39555577-39555739)
chr3 (146-306)||(25853234-25853395)
chr3 (144-306)||(4275748-4275911)
chr3 (143-308)||(29801798-29801964)
chr3 (145-306)||(31778652-31778814)
chr3 (143-306)||(17464488-17464652)
chr3 (145-306)||(27393660-27393822)
chr3 (143-306)||(5137365-5137529)
chr3 (145-306)||(30098147-30098309)
chr3 (143-306)||(22424811-22424975)
chr3 (149-272)||(32534962-32535085)
chr3 (149-287)||(25612381-25612519)
chr3 (146-306)||(23644849-23645010)
chr3 (144-306)||(26837358-26837521)
chr3 (146-285)||(23228414-23228552)
chr3 (149-306)||(26274570-26274728)
chr3 (146-263)||(29801356-29801473)
chr3 (149-306)||(24300560-24300717)
chr3 (146-288)||(50116812-50116954)
chr3 (147-286)||(32697106-32697244)
chr3 (149-306)||(41047083-41047239)
chr3 (143-287)||(51474737-51474882)
chr3 (144-287)||(37220555-37220698)
chr3 (147-260)||(51473429-51473542)
chr3 (144-284)||(45965936-45966076)
chr3 (148-290)||(25420542-25420684)
chr3 (144-232)||(37222030-37222118)
chr3 (165-274)||(18010162-18010271)
chr3 (147-242)||(25419145-25419241)
chr3 (143-323)||(49407793-49407972)
chr3 (143-322)||(27200062-27200240)
chr3 (145-288)||(23227261-23227398)
chr3 (143-322)||(50900898-50901076)
chr3 (251-322)||(55192222-55192293)
chr3 (149-260)||(32695706-32695817)
chr3 (147-322)||(37075687-37075864)
chr3 (143-199)||(52375824-52375880)
chr3 (145-322)||(51827956-51828133)
chr3 (144-322)||(27199700-27199878)
chr3 (265-322)||(29801535-29801592)
chr3 (149-221)||(22370599-22370671)
chr3 (145-199)||(330329-330383)
chr3 (146-199)||(40275093-40275146)
chr3 (143-199)||(2051292-2051348)
chr3 (145-177)||(25611497-25611529)
chr3 (145-197)||(49720856-49720908)
chr3 (143-199)||(52237310-52237366)
chr3 (143-199)||(55390090-55390146)
[»] chr1 (47 HSPs)
chr1 (145-322)||(50970647-50970824)
chr1 (144-322)||(18984117-18984295)
chr1 (145-315)||(5540194-5540364)
chr1 (145-322)||(29869619-29869796)
chr1 (145-315)||(15646571-15646741)
chr1 (148-322)||(33144288-33144462)
chr1 (149-322)||(15173099-15173272)
chr1 (146-315)||(29306953-29307122)
chr1 (146-322)||(8678911-8679086)
chr1 (149-322)||(5962947-5963120)
chr1 (146-322)||(21856412-21856588)
chr1 (143-322)||(9018970-9019149)
chr1 (146-322)||(17433216-17433392)
chr1 (144-320)||(26859431-26859606)
chr1 (146-315)||(29307317-29307487)
chr1 (148-322)||(39154021-39154195)
chr1 (143-315)||(9019338-9019511)
chr1 (148-308)||(17433597-17433758)
chr1 (144-304)||(50970276-50970437)
chr1 (146-306)||(29870003-29870164)
chr1 (147-306)||(5539817-5539977)
chr1 (147-306)||(8678542-8678702)
chr1 (143-306)||(21856039-21856203)
chr1 (147-305)||(4636356-4636515)
chr1 (144-306)||(15173478-15173640)
chr1 (145-272)||(18984538-18984665)
chr1 (145-306)||(39154404-39154566)
chr1 (146-306)||(26859059-26859220)
chr1 (154-306)||(33143925-33144078)
chr1 (144-306)||(15646190-15646353)
chr1 (145-286)||(52268289-52268430)
chr1 (147-306)||(5962579-5962739)
chr1 (206-320)||(4636033-4636146)
chr1 (143-232)||(2733416-2733505)
chr1 (148-262)||(52269177-52269291)
chr1 (146-306)||(17112282-17112442)
chr1 (148-221)||(47826966-47827039)
chr1 (137-242)||(47827037-47827141)
chr1 (143-308)||(44802555-44802720)
chr1 (146-227)||(50419725-50419806)
chr1 (143-316)||(17088516-17088688)
chr1 (245-322)||(45048253-45048330)
chr1 (144-207)||(52235153-52235216)
chr1 (145-199)||(29438929-29438983)
chr1 (245-322)||(17088249-17088326)
chr1 (148-197)||(50304441-50304490)
chr1 (149-197)||(17641864-17641912)
[»] chr7 (38 HSPs)
chr7 (144-322)||(19830418-19830596)
chr7 (145-322)||(37786766-37786943)
chr7 (146-322)||(19590525-19590701)
chr7 (144-320)||(35289272-35289448)
chr7 (149-322)||(29100220-29100393)
chr7 (145-322)||(38858642-38858819)
chr7 (146-320)||(32004985-32005159)
chr7 (143-320)||(2659211-2659388)
chr7 (144-320)||(34534162-34534338)
chr7 (149-322)||(4641443-4641616)
chr7 (143-306)||(19590909-19591073)
chr7 (152-315)||(23953105-23953268)
chr7 (144-315)||(4478076-4478247)
chr7 (143-306)||(38859025-38859189)
chr7 (144-306)||(2658837-2659000)
chr7 (144-305)||(32004612-32004774)
chr7 (143-304)||(37787153-37787315)
chr7 (144-306)||(34533789-34533952)
chr7 (146-305)||(35288903-35289063)
chr7 (145-306)||(19830804-19830965)
chr7 (143-306)||(23952727-23952892)
chr7 (159-272)||(29099863-29099976)
chr7 (143-288)||(38160948-38161093)
chr7 (149-306)||(4641828-4641983)
chr7 (144-284)||(28583437-28583577)
chr7 (147-287)||(28584326-28584466)
chr7 (245-322)||(35579256-35579333)
chr7 (145-210)||(39137014-39137080)
chr7 (149-322)||(35578902-35579074)
chr7 (251-315)||(32427397-32427461)
chr7 (145-201)||(34595263-34595319)
chr7 (145-221)||(49064033-49064109)
chr7 (144-199)||(787279-787334)
chr7 (148-322)||(9181534-9181708)
chr7 (143-322)||(7732485-7732664)
chr7 (146-199)||(26048439-26048492)
chr7 (146-199)||(27245203-27245256)
chr7 (143-199)||(48247584-48247640)
[»] chr6 (37 HSPs)
chr6 (144-322)||(20741098-20741276)
chr6 (145-322)||(15828010-15828187)
chr6 (146-322)||(10900299-10900475)
chr6 (144-322)||(18257135-18257313)
chr6 (146-322)||(11276951-11277127)
chr6 (143-322)||(28472634-28472812)
chr6 (143-322)||(29859823-29860001)
chr6 (144-320)||(12935528-12935704)
chr6 (143-322)||(11444984-11445163)
chr6 (147-322)||(31470685-31470860)
chr6 (146-320)||(1149802-1149977)
chr6 (143-306)||(2319669-2319832)
chr6 (143-306)||(12935154-12935318)
chr6 (149-315)||(10899942-10900109)
chr6 (143-306)||(11445371-11445535)
chr6 (143-306)||(22219737-22219901)
chr6 (147-322)||(18505288-18505463)
chr6 (145-322)||(23073998-23074164)
chr6 (144-306)||(23075512-23075675)
chr6 (149-322)||(2322588-2322760)
chr6 (146-309)||(4811372-4811535)
chr6 (149-272)||(18504922-18505045)
chr6 (145-306)||(20741485-20741650)
chr6 (145-306)||(31470314-31470476)
chr6 (145-315)||(11276589-11276760)
chr6 (146-265)||(18257563-18257682)
chr6 (148-288)||(29033436-29033577)
chr6 (147-272)||(15827639-15827766)
chr6 (144-234)||(1149463-1149553)
chr6 (146-272)||(4811675-4811801)
chr6 (149-282)||(3835135-3835268)
chr6 (143-287)||(18296142-18296285)
chr6 (148-288)||(29035040-29035180)
chr6 (145-321)||(35163557-35163734)
chr6 (146-202)||(22534214-22534270)
chr6 (146-322)||(32836367-32836542)
chr6 (143-191)||(5120970-5121018)
[»] chr2 (54 HSPs)
chr2 (144-320)||(11090519-11090695)
chr2 (143-322)||(239350-239528)
chr2 (145-322)||(40027139-40027316)
chr2 (143-322)||(18451200-18451379)
chr2 (143-322)||(40815714-40815893)
chr2 (144-322)||(22374318-22374496)
chr2 (145-322)||(26538096-26538273)
chr2 (146-320)||(28616613-28616788)
chr2 (144-322)||(1978106-1978284)
chr2 (146-322)||(43058333-43058509)
chr2 (143-322)||(3025463-3025641)
chr2 (149-319)||(14432145-14432315)
chr2 (143-315)||(26538454-26538627)
chr2 (149-315)||(8425736-8425902)
chr2 (143-306)||(7446730-7446894)
chr2 (145-306)||(18450829-18450991)
chr2 (145-287)||(20444748-20444890)
chr2 (24-145)||(16194936-16195057)
chr2 (139-306)||(40815338-40815506)
chr2 (144-306)||(22374709-22374872)
chr2 (145-320)||(7446341-7446519)
chr2 (145-306)||(28616998-28617160)
chr2 (143-306)||(43058717-43058880)
chr2 (149-306)||(40027524-40027682)
chr2 (144-306)||(11090904-11091067)
chr2 (147-306)||(239736-239896)
chr2 (144-272)||(1978528-1978656)
chr2 (143-287)||(20440436-20440579)
chr2 (147-287)||(35781067-35781207)
chr2 (146-287)||(35779708-35779849)
chr2 (144-264)||(28847122-28847242)
chr2 (146-305)||(3025848-3026006)
chr2 (149-305)||(8425358-8425514)
chr2 (143-306)||(14432525-14432689)
chr2 (148-287)||(8972239-8972378)
chr2 (148-288)||(15551501-15551641)
chr2 (148-286)||(15552459-15552596)
chr2 (143-322)||(28143400-28143578)
chr2 (145-304)||(31797166-31797324)
chr2 (144-311)||(14942225-14942394)
chr2 (145-199)||(42192736-42192790)
chr2 (143-199)||(25336093-25336149)
chr2 (143-199)||(38007947-38008003)
chr2 (149-220)||(3822924-3822995)
chr2 (146-197)||(4355755-4355806)
chr2 (143-221)||(62954-63032)
chr2 (145-199)||(43216202-43216256)
chr2 (146-199)||(6949937-6949990)
chr2 (143-322)||(20128107-20128286)
chr2 (146-199)||(42192240-42192293)
chr2 (135-199)||(11540131-11540195)
chr2 (143-199)||(24140167-24140223)
chr2 (143-199)||(33921105-33921161)
chr2 (145-197)||(44220140-44220192)
[»] chr8 (37 HSPs)
chr8 (143-322)||(19176659-19176838)
chr8 (144-319)||(41681132-41681306)
chr8 (138-322)||(12571855-12572040)
chr8 (145-322)||(9930026-9930203)
chr8 (137-322)||(44831614-44831799)
chr8 (143-320)||(11656452-11656630)
chr8 (149-322)||(33328161-33328334)
chr8 (150-322)||(13224645-13224816)
chr8 (139-322)||(31133213-31133396)
chr8 (146-322)||(9178005-9178180)
chr8 (145-306)||(13225023-13225185)
chr8 (143-306)||(19176287-19176451)
chr8 (145-306)||(11656841-11657003)
chr8 (145-306)||(44831246-44831408)
chr8 (149-306)||(9928912-9929070)
chr8 (146-295)||(41681529-41681679)
chr8 (143-272)||(34540967-34541096)
chr8 (143-306)||(33742919-33743082)
chr8 (147-305)||(31133605-31133764)
chr8 (149-306)||(12572235-12572393)
chr8 (148-306)||(33328524-33328683)
chr8 (193-320)||(33743290-33743417)
chr8 (149-322)||(4630161-4630328)
chr8 (144-254)||(11336959-11337069)
chr8 (144-300)||(4629795-4629952)
chr8 (145-287)||(8073956-8074097)
chr8 (143-284)||(10918123-10918264)
chr8 (225-287)||(43958264-43958326)
chr8 (143-322)||(35427182-35427361)
chr8 (144-179)||(9177665-9177700)
chr8 (145-186)||(10919691-10919732)
chr8 (143-199)||(15255850-15255906)
chr8 (251-321)||(18805267-18805337)
chr8 (238-306)||(9177724-9177793)
chr8 (143-199)||(6115604-6115660)
chr8 (147-199)||(28254919-28254971)
chr8 (143-191)||(43958206-43958254)
[»] scaffold0951 (2 HSPs)
scaffold0951 (144-320)||(1665-1841)
scaffold0951 (140-306)||(2051-2218)
[»] chr4 (69 HSPs)
chr4 (146-322)||(11153516-11153692)
chr4 (143-322)||(12234326-12234505)
chr4 (144-316)||(25447611-25447783)
chr4 (148-322)||(33109686-33109860)
chr4 (148-322)||(46193774-46193948)
chr4 (143-322)||(25937667-25937846)
chr4 (145-322)||(15523603-15523780)
chr4 (143-322)||(22434547-22434724)
chr4 (148-315)||(38962195-38962362)
chr4 (148-322)||(4219559-4219733)
chr4 (148-322)||(23494445-23494619)
chr4 (145-322)||(48526195-48526371)
chr4 (143-322)||(51020794-51020973)
chr4 (149-322)||(2118665-2118837)
chr4 (145-322)||(22170306-22170482)
chr4 (146-308)||(46193405-46193568)
chr4 (144-322)||(54995437-54995614)
chr4 (146-306)||(22434179-22434340)
chr4 (146-306)||(25447247-25447408)
chr4 (143-322)||(45082429-45082606)
chr4 (144-305)||(15523233-15523395)
chr4 (146-306)||(45082808-45082969)
chr4 (143-306)||(4219943-4220107)
chr4 (140-306)||(20470895-20471062)
chr4 (143-262)||(23494872-23494991)
chr4 (146-306)||(12234713-12234874)
chr4 (144-306)||(54995067-54995230)
chr4 (149-306)||(48526565-48526723)
chr4 (144-272)||(33109883-33110011)
chr4 (144-295)||(51021191-51021342)
chr4 (145-272)||(25938090-25938217)
chr4 (145-306)||(11153145-11153307)
chr4 (148-306)||(2118295-2118454)
chr4 (149-306)||(18751602-18751760)
chr4 (147-288)||(20958264-20958403)
chr4 (143-260)||(18763951-18764068)
chr4 (214-322)||(12503805-12503913)
chr4 (163-306)||(12503453-12503597)
chr4 (147-287)||(44892552-44892692)
chr4 (164-287)||(43243685-43243807)
chr4 (144-287)||(48293592-48293735)
chr4 (144-288)||(48713749-48713893)
chr4 (146-263)||(35363028-35363146)
chr4 (144-282)||(48708293-48708431)
chr4 (149-282)||(16690939-16691072)
chr4 (164-284)||(43281198-43281317)
chr4 (146-287)||(48294946-48295088)
chr4 (146-282)||(16691481-16691616)
chr4 (147-287)||(44890518-44890658)
chr4 (145-272)||(10258306-10258433)
chr4 (153-284)||(20957196-20957327)
chr4 (145-216)||(16318251-16318322)
chr4 (204-287)||(43242328-43242411)
chr4 (255-322)||(18751971-18752038)
chr4 (136-322)||(17503964-17504149)
chr4 (207-287)||(44220781-44220861)
chr4 (146-242)||(55189528-55189624)
chr4 (245-322)||(35193406-35193483)
chr4 (282-322)||(17504329-17504369)
chr4 (146-287)||(30597925-30598065)
chr4 (145-199)||(55677451-55677505)
chr4 (148-199)||(44219377-44219428)
chr4 (144-199)||(46737148-46737203)
chr4 (143-197)||(12593518-12593572)
chr4 (143-322)||(34789752-34789932)
chr4 (289-322)||(40160236-40160269)
chr4 (138-199)||(41608908-41608969)
chr4 (143-199)||(33689826-33689882)
chr4 (143-199)||(45838544-45838600)
[»] scaffold0273 (2 HSPs)
scaffold0273 (144-322)||(4576-4754)
scaffold0273 (185-306)||(4242-4364)
[»] scaffold0019 (1 HSPs)
scaffold0019 (143-322)||(134042-134221)
[»] scaffold1223 (2 HSPs)
scaffold1223 (148-322)||(755-928)
scaffold1223 (146-315)||(1116-1286)
[»] scaffold0007 (4 HSPs)
scaffold0007 (145-322)||(64301-64478)
scaffold0007 (149-306)||(64689-64847)
scaffold0007 (148-322)||(205738-205911)
scaffold0007 (145-242)||(210787-210884)
[»] scaffold0027 (2 HSPs)
scaffold0027 (143-322)||(42528-42706)
scaffold0027 (149-315)||(42172-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (149-322)||(10242-10414)
scaffold0432 (149-272)||(9935-10057)
[»] scaffold0417 (2 HSPs)
scaffold0417 (165-322)||(10640-10797)
scaffold0417 (146-306)||(11007-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (145-313)||(18834-19001)
scaffold0176 (146-242)||(19070-19166)
[»] scaffold1585 (1 HSPs)
scaffold1585 (147-288)||(568-709)
[»] scaffold0113 (1 HSPs)
scaffold0113 (145-272)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (214-322)||(16564-16672)
scaffold0157 (163-306)||(16880-17024)
[»] scaffold0057 (2 HSPs)
scaffold0057 (149-287)||(61862-62000)
scaffold0057 (144-220)||(61026-61102)
[»] scaffold1696 (1 HSPs)
scaffold1696 (150-287)||(454-589)
[»] scaffold0076 (1 HSPs)
scaffold0076 (149-249)||(8451-8551)
[»] scaffold0168 (1 HSPs)
scaffold0168 (195-288)||(7691-7784)
[»] scaffold1339 (1 HSPs)
scaffold1339 (143-171)||(30-58)
[»] scaffold0830 (1 HSPs)
scaffold0830 (143-171)||(5352-5380)
[»] scaffold0097 (1 HSPs)
scaffold0097 (143-199)||(46761-46817)


Alignment Details
Target: scaffold0295 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 4790 - 4969
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4790 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 4889  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4890 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 148 - 260
Target Start/End: Complemental strand, 5334 - 5222
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  248 catttttcgtcct 260  Q
    |||||||||||||    
T  5234 catttttcgtcct 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 5e-90; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 18183517 - 18183338
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183517 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 18183418  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18183417 tgttgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 144 - 322
Target Start/End: Complemental strand, 2865302 - 2865124
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  2865302 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 2865203  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||| |||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  2865202 gtttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 5819474 - 5819298
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  5819474 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 5819375  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||    
T  5819374 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 146 - 322
Target Start/End: Original strand, 8647438 - 8647614
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||    
T  8647438 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttgt 8647537  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  8647538 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 146 - 322
Target Start/End: Original strand, 19359136 - 19359312
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  19359136 ggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 19359235  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  19359236 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 15708968 - 15709146
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  15708968 ttaggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 15709067  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15709068 tgttgcatatttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 144 - 322
Target Start/End: Complemental strand, 24362383 - 24362205
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||     
T  24362383 taggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcattttt 24362284  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  24362283 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 8460928 - 8461106
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  8460928 taggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 8461027  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  8461028 gttgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 15372421 - 15372242
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15372421 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 15372322  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||||||||| || |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||||    
T  15372321 tgttgcattttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 29455288 - 29455111
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  29455288 aggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 29455189  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |||| | ||||||    
T  29455188 ttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 14215792 - 14215616
Alignment:
Q  142 cttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 241  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  14215792 cttaggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcattt 14215693  T
Q  242 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccccta 318  Q
    | ||||||||||||||| || | |||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  14215692 ttgttgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 164739 - 164560
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||| | ||||| ||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  164739 ttaggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 164640  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||||||||| |||||||| |||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  164639 tgttgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 8647986 - 8647822
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8647986 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 8647887  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||| ||||| | ||||| |  ||||| |||||||||||||| ||||||||||    
T  8647886 tgttgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 5818927 - 5819090
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  5818927 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 5819026  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||| ||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  5819027 gttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 18182968 - 18183131
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  18182968 taggtttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18183067  T
Q  244 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||||| | |||||| | ||| |||||||||||||| ||||||||||    
T  18183068 gttgcatttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 306
Target Start/End: Complemental strand, 19359683 - 19359520
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19359683 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19359584  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||| |||||||||||||||||| ||||| |  ||||| ||||| ||||||||  |||||||||    
T  19359583 gttggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 311
Target Start/End: Complemental strand, 14464067 - 14463901
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |  || |||||||||| ||||||||||| ||||||||||||||||||     
T  14464067 taggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcattttt 14463968  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 311  Q
     ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  14463967 attgcatttttcgtcctacc-ccaattttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 8461477 - 8461315
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |    
T  8461477 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttg 8461378  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||| ||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  8461377 ctgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 148 - 306
Target Start/End: Original strand, 2864756 - 2864915
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  2864756 cttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttttgttg 2864855  T
Q  248 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  2864856 catttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 16018588 - 16018763
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| || || ||||||||||||| |||||||||||||||||||||||| |||||      
T  16018588 aggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-attttta 16018686  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||| ||||||||| ||||||||||||||||||||   ||| |||| ||||||||||||||||||||||||||    
T  16018687 ttgcattttccgtcctacc-cccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 146 - 305
Target Start/End: Original strand, 164191 - 164350
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||| ||    
T  164191 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatcatttt-gt 164289  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 305  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| |||||    
T  164290 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 148 - 306
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||||| ||||||||| |||||||||| ||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  248 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 24331556 - 24331722
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc--att 240  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||    
T  24331556 ttaggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctattt 24331655  T
Q  241 ttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    || |||||||||||| ||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  24331656 tttgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 148 - 322
Target Start/End: Complemental strand, 24332107 - 24331929
Alignment:
Q  148 cttaattacactttt-ggtcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttc-g 244  Q
    ||||||||||||||| |||| || ||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||  |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  245 ttgcattttt-cgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 152 - 306
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  152 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 251  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  252 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 145 - 308
Target Start/End: Complemental strand, 25000635 - 25000471
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||  ||||||||||||||||||| |||| ||||||||||||||| |    
T  25000635 aggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttg 25000536  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 308  Q
    ||||||||||||||| |||||| ||||| |  |||||||||||||||||||| ||||||||||||    
T  25000535 ttgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 152 - 306
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  152 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 251  Q
    |||||||||||||||| | ||||||||||||| |||||||||| || ||||||| ||||||||||||||| |||||||||| ||||||||| || |||||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  252 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 145 - 306
Target Start/End: Original strand, 29454739 - 29454901
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||| |    
T  29454739 aggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttg 29454838  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  29454839 ctgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 144 - 308
Target Start/End: Complemental strand, 16019134 - 16018969
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| ||||||||| |||| |||| ||| ||||||||||||||||     
T  16019134 taggtttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcattttt 16019035  T
Q  244 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttagac 308  Q
    |||| |||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||||    
T  16019034 gttgtatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 146 - 288
Target Start/End: Complemental strand, 7349562 - 7349420
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||  ||||||| |||||||||| ||    
T  7349562 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttgt 7349463  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    |||| ||||| ||||||| |||||||| | |||||||||||||    
T  7349462 tgcacttttcatcctaccccccattttttcctccaaaaacgca 7349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 168 - 322
Target Start/End: Original strand, 25000112 - 25000266
Alignment:
Q  168 tcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctccc 267  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||| |||| ||||||| ||||||||||||  |||||||||| |||||||| |||    
T  25000112 tcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctacccccc 25000211  T
Q  268 attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| |||||||| ||||||||||| ||||| | ||||||    
T  25000212 attttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 15709513 - 15709353
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||| | |||||||||  ||    
T  15709513 ggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttctgt 15709415  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||| ||||| |  ||||| || ||||||||||| ||||||||||    
T  15709414 tgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 15371873 - 15371995
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||| ||||||| |||||| |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  15371873 cttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgttg 15371971  T
Q  248 catttttcgtcctacctcccattt 271  Q
    |||||||||||| |||||| ||||    
T  15371972 catttttcgtcccacctcctattt 15371995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 147 - 272
Target Start/End: Complemental strand, 4222266 - 4222142
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||||||||||  ||| |||| ||||||||||  ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  247 gcatttttcgtcctacctcccatttt 272  Q
    ||||||||||||||||| ||||||||    
T  4222166 gcatttttcgtcctacc-cccatttt 4222142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 146 - 286
Target Start/End: Original strand, 4623148 - 4623286
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||||||||  |||||||||||||||||||  |    
T  4623148 ggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcatttttat 4623247  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacg 286  Q
     ||||||| ||||||||  |||||||||| |||||||||||    
T  4623248 ggcattttccgtcctac--cccattttatcctccaaaaacg 4623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 7348559 - 7348685
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||| ||||||||||| |||||| | |||||||||||| ||||| ||||||||||||||||||||||||  ||||||  |||||||||| ||    
T  7348559 ggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttgt 7348658  T
Q  246 tgcatttttcgtcctacctcccatttt 272  Q
    |||| ||||||||||||| ||||||||    
T  7348659 tgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 152 - 284
Target Start/End: Complemental strand, 6019309 - 6019177
Alignment:
Q  152 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcat- 250  Q
    |||||| |||||||| || ||||||||| |||||||||||||| || ||| |||||||||||||||||||| ||| || |||||||||||| |||||||     
T  6019309 attacatttttggtcatcatgttttggc-tactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcatt 6019211  T
Q  251 ttttcgtcctacctcccattttattctccaaaaa 284  Q
    |||||||||||||||||||||||| |||||||||    
T  6019210 ttttcgtcctacctcccattttatcctccaaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 146 - 284
Target Start/End: Original strand, 4219663 - 4219800
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||| |||||||||||||| ||| | || ||| ||||| |||| |||||||||||||||||   |||||| | |||||||||| ||    
T  4219663 ggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagttatcatttttgt 4219762  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaa 284  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  4219763 tgcatttttcgtcctacc-cccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 6018315 - 6018430
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||||||||| || ||||||||||||||||||||   | |||||||||||||||| |||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattat-cttcaattatcatttttgtt 6018413  T
Q  247 gcatttttcgtcctacc 263  Q
    ||| |||| ||||||||    
T  6018414 gcagttttagtcctacc 6018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 159 - 285
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  159 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtc 258  Q
    |||| |||||||||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  || ||||||||||||||  |||||||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  259 ctacctcccattttattctccaaaaac 285  Q
    ||||| |||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 13814226 - 13814131
Alignment:
Q  197 cctgcccttttaaaacagaacaaaacggtcct-----tcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    |||||||||||||| ||||||||||| ||| |     |||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctacc-cccattttatcctccaaaaacgca 13814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 308
Target Start/End: Complemental strand, 41834606 - 41834443
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat-tttc 243  Q
    ||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| | |  ||||||||| |||| | || |||||| |||     
T  41834606 aggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtttt 41834508  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 308  Q
     ||||| |||| ||||||||||| |||||   |||   |||||||||||||| ||||||||||||    
T  41834507 tttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 14462686 - 14462730
Alignment:
Q  228 ttcaattatcattttcgttgcatttttcgtcctacctcccatttt 272  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  14462686 ttcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 16752680 - 16752757
Alignment:
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||| |||| ||| ||||||| |||||   ||||| ||||||| |||||| | ||||||||||||||||||||||||    
T  16752680 ttgcagtttttgtcatacctcctattttcaactccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 15029857 - 15029804
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 197  Q
    ||||||||||||||||||||||||||   ||||| || |||||||||| |||||    
T  15029857 taggcttaattacacttttggtcctcccattttgaccaactcacgaaaatggtc 15029804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 15115646 - 15115585
Alignment:
Q  138 taaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||| ||||||||||||||||||||| |||||   ||||| || |||||||||| |||||||    
T  15115646 taaaattaggcttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcct 15115585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 22651859 - 22651782
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 221  Q
    ||||||||||||||||||| |||||||  ||||| ||  ||||||||| |||| ||||| |||| |||  ||||||||    
T  22651859 taggcttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaa 22651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 24325637 - 24325580
Alignment:
Q  265 cccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| ||   ||||||||| |||||||||||| || ||||||||||    
T  24325637 cccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 28495288 - 28495211
Alignment:
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||| |||| ||||||||||| |||||   ||||| || ||||||||||| | ||||||||||||||| | ||||||    
T  28495288 ttgcagttttagtcctacctcctattttcaactccagaaccgcagagaaatgatagttttagacctacctcatatgct 28495211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 39556122 - 39555946
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39556122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcattttcgt 39556023  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39556022 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 144 - 322
Target Start/End: Complemental strand, 31779199 - 31779021
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31779199 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 31779100  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  31779099 gttgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 5136978 - 5137156
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  5136978 taggtttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 5137077  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5137078 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 142 - 320
Target Start/End: Original strand, 20840556 - 20840734
Alignment:
Q  142 cttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 241  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  20840556 cttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcattt 20840655  T
Q  242 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    | |||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  20840656 ttgttgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 23644461 - 23644638
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  23644461 aggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttg 23644560  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23644561 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 149 - 322
Target Start/End: Original strand, 41046703 - 41046876
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 24301104 - 24300925
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| | |||||||||    
T  24301104 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttt 24301005  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24301004 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 37726928 - 37727105
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |    
T  37726928 aggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37727027  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37727028 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 148 - 322
Target Start/End: Complemental strand, 25853770 - 25853596
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||| || | |||||||||||||||||| |||||||||||||||||||| ||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 27394123 - 27393946
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||| |    
T  27394123 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttg 27394024  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||| | ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27394023 ttgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 146 - 315
Target Start/End: Original strand, 43973441 - 43973610
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacccc 43973610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 30104479 - 30104657
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||||    
T  30104479 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttt 30104578  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||    
T  30104579 tgttgcatttttcgtcctacc-cccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 32535508 - 32535330
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatt----- 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  32535508 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaaatt 32535409  T
Q  241 ttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  32535408 tttgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 143 - 301
Target Start/End: Original strand, 48452986 - 48453144
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48452986 ttaggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 48453085  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagt 301  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  48453086 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 150 - 322
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  150 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 249  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  250 tttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 26837903 - 26837725
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||||| ||||| |||||||||    
T  26837903 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttt 26837805  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  26837804 tgttgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 43973988 - 43973824
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  43973988 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 43973889  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||||||||    
T  43973888 tgttgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 37727475 - 37727314
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  37727475 ggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgt 37727376  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  37727375 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 26275114 - 26274936
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||| ||||||| | |||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||    
T  26275114 ttaggtttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttt 26275015  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||| |||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  26275014 tgttgc-tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 17465038 - 17464860
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||   ||||||||||| |||||||||||||||||||||||||||||| |    
T  17465038 aggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttg 17464939  T
Q  245 ttgcat-ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||| |||| |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  17464938 ttgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 20841107 - 20840945
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  20841107 aggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 20841008  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  20841007 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 145 - 306
Target Start/End: Original strand, 39555577 - 39555739
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |    
T  39555577 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttg 39555676  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||| |||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  39555677 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 25853234 - 25853395
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||    
T  25853234 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttgt 25853333  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||| |||||||| ||||| |  ||||| |||||||||||||||||||||||||    
T  25853334 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 144 - 306
Target Start/End: Complemental strand, 4275911 - 4275748
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||     
T  4275911 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcattttt 4275812  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  4275811 gttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 143 - 308
Target Start/End: Complemental strand, 29801964 - 29801798
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29801964 ttaggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttt 29801865  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 308  Q
     |||||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| ||||||||    
T  29801864 tgttgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 145 - 306
Target Start/End: Original strand, 31778652 - 31778814
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |    
T  31778652 aggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttg 31778751  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  31778752 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 17464488 - 17464652
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17464488 ttaggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 17464587  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  ||||| ||||| | |||||| ||||||||||    
T  17464588 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 145 - 306
Target Start/End: Original strand, 27393660 - 27393822
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  27393660 aggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttg 27393759  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||| || ||||| |  | ||| |||||||||||||| ||||||||||    
T  27393760 ttgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 5137529 - 5137365
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  5137529 ttaggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttt 5137430  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||| |||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  5137429 tgttgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 30098309 - 30098147
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |    
T  30098309 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttg 30098210  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  || || ||||||||||| || ||||||||||    
T  30098209 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 22424811 - 22424975
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||| |||||||||  ||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  22424811 ttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattatcatttt 22424910  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  ||||| ||| |||||||||| ||||||||||    
T  22424911 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 32534962 - 32535085
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  249 atttttcgtcctacctcccatttt 272  Q
    |||||||||||||||||| |||||    
T  32535062 atttttcgtcctacctcctatttt 32535085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 149 - 287
Target Start/End: Complemental strand, 25612519 - 25612381
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||| || |||||||||||| |||||    
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacgc 25612381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 23645010 - 23644849
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| ||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||| |||||||||| ||||| |  ||| |  ||||||||||||| ||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 26837358 - 26837521
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| ||||||||| |||||||||| || ||||||||||||||||||| |||||||||||||||| |||| ||| ||||||||||||||||||||||||     
T  26837358 taggtttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcattttt 26837457  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  26837458 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 146 - 285
Target Start/End: Complemental strand, 23228552 - 23228414
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||  |||||||||||||||||||  |    
T  23228552 ggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcatttttat 23228454  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaac 285  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  23228453 tgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||| ||||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||| ||||||| ||||| |  ||||| ||||||||  |||| ||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 146 - 263
Target Start/End: Original strand, 29801356 - 29801473
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  29801356 ggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 29801455  T
Q  246 tgcatttttcgtcctacc 263  Q
    ||||||||||||| ||||    
T  29801456 tgcatttttcgtcttacc 29801473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||| |||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    | ||||||||| |||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 288
Target Start/End: Complemental strand, 50116954 - 50116812
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||| ||||| ||||||||| ||| |||||||||||||| |||| |||||||||| ||    
T  50116954 ggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttgt 50116855  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    |||| ||||||||||||| |||||||| | |||||||||||||    
T  50116854 tgcaattttcgtcctaccccccattttttcctccaaaaacgca 50116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 147 - 286
Target Start/End: Complemental strand, 32697244 - 32697106
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||| | |||||||||||||||||| |||||||||||||| | |||  ||||||||||||||||||||||  || |||||||||||||||| |||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacg 286  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  32697144 gcatttttcgtcctacc-cccattttatcctccaaaaacg 32697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||| | || || |||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||||||||||||||| |||||    
T  41047239 ttaattacactttcg-tcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaacg-tccttcaattatcatttttgttgc 41047142  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 143 - 287
Target Start/End: Complemental strand, 51474882 - 51474737
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||  |||||| | ||||||||||    
T  51474882 ttaggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttt 51474783  T
Q  243 cgttgcatttttcgtcctacctccca-ttttattctccaaaaacgc 287  Q
     |||||||||||||||||||| || | |||||| ||||||||||||    
T  51474782 tgttgcatttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 287
Target Start/End: Original strand, 37220555 - 37220698
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |  | || ||| |||||||||||||| ||||  |||||||| ||||||||||     
T  37220555 taggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcattttt 37220654  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    |||||| |||||||||||||  ||||||||| ||||||||||||    
T  37220655 gttgcacttttcgtcctaccctccattttatcctccaaaaacgc 37220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||  |||||||  |||||||||| |||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  247 gcatttttcgtcct 260  Q
    ||| |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 144 - 284
Target Start/End: Original strand, 45965936 - 45966076
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  |  |||||| ||||||||||| |||||||  ||||||| ||||||||||      
T  45965936 taggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgt 45966035  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaa 284  Q
    |||||||||||||| ||| | |||||||| | |||||||||    
T  45966036 gttgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 290
Target Start/End: Complemental strand, 25420684 - 25420542
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||| || |||| ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  ||||||||||||| ||||| ||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcaga 290  Q
    ||||||||||| |||| |||||||||| || |||||| |||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 37222118 - 37222030
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 232  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||  ||||||||    
T  37222118 taggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaaccatccttcaa 37222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 165 - 274
Target Start/End: Complemental strand, 18010271 - 18010162
Alignment:
Q  165 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacct 264  Q
    ||||| |||||| | |||||||||||| |||| | ||||||||||||||||||||||  ||  ||||||||||||||| ||||||||||||||||| ||     
T  18010271 tcctcctgttttcgtctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccc 18010172  T
Q  265 cccattttat 274  Q
     |||||||||    
T  18010171 tccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 242
Target Start/End: Original strand, 25419145 - 25419241
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc-ttcaattatcatttt 242  Q
    |||| |||| |||||||||| ||||||||| || ||||||||||| | || ||||||||||||||||||||||||| |||| |||||||||||||||    
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcatttt 25419241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 323
Target Start/End: Original strand, 49407793 - 49407972
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| |||||||||| |||| | || | |   |||    
T  49407793 ttaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttt 49407892  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgcta 323  Q
     ||  || |||| ||| ||||||| |||||   |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  49407893 tgta-cagttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 27200240 - 27200062
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||| |  ||||| ||  ||||||||| |||| |||||  ||| |||  |||||| || |||||  || |||||| ||    
T  27200240 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgtt 27200142  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
      ||||| |||| ||| ||||||| |||||   ||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  27200141 ttttgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 288
Target Start/End: Original strand, 23227261 - 23227398
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||| ||||| ||||||||||   |||||||||| ||||||||||| |||||||       | ||||||||||||   ||||| ||||| ||||||| |    
T  23227261 aggctcaattagacttttggtctctgtgttttggcttactcacgaaaatggtcctc------tgaaacagaacaaatttgtcctccaattttcatttttg 23227354  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    |||||||||||||||| |  |||||||||| |||||||||||||    
T  23227355 ttgcatttttcgtccttctccccattttatcctccaaaaacgca 23227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 50901076 - 50900898
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||  ||||| ||  ||||| ||| ||| ||||||  ||  |||  ||||||||| |||| | || ||| || ||    
T  50901076 ttaggcttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactat-atgtt 50900978  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
      ||||| |||| ||||||||||| |||||   ||||| ||||||| ||||||  |||||||||| ||||||||||||||    
T  50900977 ttttgcagtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgct 50900898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 55192222 - 55192293
Alignment:
Q  251 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||| ||||||||||| |||||   ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  55192222 ttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 260
Target Start/End: Original strand, 32695706 - 32695817
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||| ||||||||||| | |||||||||||| |||||| || |  || | ||||||||||||||||||  ||||| | ||||| ||||| |||||    
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  249 atttttcgtcct 260  Q
    | |||| |||||    
T  32695806 aattttagtcct 32695817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 322
Target Start/End: Original strand, 37075687 - 37075864
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatca--ttttc 243  Q
    ||||||||||||||||||||  ||  ||||| || |||||||||| |||||||||| |||| ||| || |||||| | |||| | || |||    ||||     
T  37075687 gcttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatca-aacaaacccgtccctaaactatatgtttttt 37075785  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||| |||| ||||||||||  |||||   ||||| |||||||||||||| || |||||||||||||||||||||||    
T  37075786 tttgcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 52375880 - 52375824
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  52375880 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 51827956 - 51828133
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct-gcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||| | || ||| || ||     
T  51827956 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatc-gaacaaaatcgtccctaaactat-atgttt 51828053  T
Q  244 gttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||| |||||| ||||| |||||   ||||| ||||||| | |||| |||||||||| || ||| ||||||||    
T  51828054 tttgcatttttagtcctatctccctattttcaactccagaaacgcacataaatgacagttttagtccaaccacctatgct 51828133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 27199700 - 27199878
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| ||||||||| ||||||||||||  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||  | || |||   |||     
T  27199700 taggtttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatgtttt 27199799  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||| |||| || |||| ||| |||||   ||| | ||||||||| ||||| |||||||||||||||||||||||||    
T  27199800 tttgcagttttagtgctacatcctattttcaactctagaaacgcagataaatatcagttttagacctaccccctatgct 27199878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 29801535 - 29801592
Alignment:
Q  265 cccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||| |||||| |||||||||| |||||||||||| |||| | ||||||    
T  29801535 cccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 22370599 - 22370671
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 221  Q
    ||||||||||||||||||||||  ||||| || |||||||||| ||||||| || |||| ||||  |||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaa 22370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 330383 - 330329
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||| |||||||||||  ||||| || |||||||||| |||||||    
T  330383 aggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcct 330329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 40275093 - 40275146
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  40275093 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 40275146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 2051292 - 2051348
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  2051292 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 2051348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 25611497 - 25611529
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttg 177  Q
    ||||||||||||||||||| |||||||||||||    
T  25611497 aggcttaattacacttttgatcctcgtgttttg 25611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 49720908 - 49720856
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 197  Q
    ||||||||||||||||||||||||  | ||||| || |||||||||| |||||    
T  49720908 aggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtc 49720856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 52237366 - 52237310
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||| ||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  52237366 ttagccttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 52237310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 55390146 - 55390090
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||||||  ||||  || | |||||||| |||||||    
T  55390146 ttaggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcct 55390090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 2e-86; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 50970824 - 50970647
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  50970824 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 50970725  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50970724 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 18984117 - 18984295
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18984117 taggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18984216  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  18984217 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 145 - 315
Target Start/End: Complemental strand, 5540364 - 5540194
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |    
T  5540364 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttg 5540265  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5540264 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 5540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 29869619 - 29869796
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |    
T  29869619 aggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttg 29869718  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29869719 ttgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 145 - 315
Target Start/End: Complemental strand, 15646741 - 15646571
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |    
T  15646741 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 15646642  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  15646641 ttgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 15646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 148 - 322
Target Start/End: Complemental strand, 33144462 - 33144288
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||||    
T  33144462 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttttgttg 33144363  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  33144362 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33144288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 149 - 322
Target Start/End: Original strand, 15173099 - 15173272
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||| |||||    
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 146 - 315
Target Start/End: Original strand, 29306953 - 29307122
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||    
T  29306953 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307052  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29307053 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccc 29307122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 8679086 - 8678911
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||    
T  8679086 ggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttttgt 8678987  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  8678986 tgcatttttcgtcctacct-ccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 149 - 322
Target Start/End: Complemental strand, 5963120 - 5962947
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||| ||||||||||||||| |||||    
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 21856588 - 21856412
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |     
T  21856588 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcatttttgc 21856489  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21856488 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 9018970 - 9019149
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  9018970 ttaggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttt 9019069  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| | | ||||||| ||||||||||||||    
T  9019070 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 146 - 322
Target Start/End: Original strand, 17433216 - 17433392
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  17433216 ggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 17433315  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  17433316 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 144 - 320
Target Start/End: Complemental strand, 26859606 - 26859431
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||     
T  26859606 taggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcattttt 26859507  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  26859506 gttgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 146 - 315
Target Start/End: Complemental strand, 29307487 - 29307317
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29307487 ggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 29307388  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| |||||||||||||||||||    
T  29307387 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 29307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 148 - 322
Target Start/End: Original strand, 39154021 - 39154195
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||| | ||||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 143 - 315
Target Start/End: Complemental strand, 9019511 - 9019338
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||    
T  9019511 ttaggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttt 9019412  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
     ||||||||||||||||||||||| ||||| |  | ||| ||||||||||||||||||||||||||||| ||||    
T  9019411 tgttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacctgcccc 9019338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 148 - 308
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  248 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 308  Q
    ||||||||||||||||||| ||||| |  || || |||||||||||||| ||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 50970276 - 50970437
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  50970276 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcattttt 50970375  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttt 304  Q
    ||||||||||||||||||||| | ||||| |  ||||| |||||||||||||| ||||||||    
T  50970376 gttgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 29870164 - 29870003
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  29870164 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 29870065  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||| ||||| |  ||  | |||||||||||||| ||||||||||    
T  29870064 tgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 147 - 306
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  247 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    | |||||||||||||||||| ||||| |  ||||| ||||||| ||||||  |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 147 - 306
Target Start/End: Original strand, 8678542 - 8678702
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  247 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||| | ||||| |  || || ||||||| |||||| ||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttag 8678702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 21856039 - 21856203
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21856039 ttagacttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 21856138  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     |||||||||||| ||||| |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  21856139 tgttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 147 - 305
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  247 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 305  Q
    ||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 306
Target Start/End: Complemental strand, 15173640 - 15173478
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||     
T  15173640 taggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcattttt 15173542  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  15173541 gttgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 18984665 - 18984538
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18984665 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 18984566  T
Q  245 ttgcatttttcgtcctacctcccatttt 272  Q
    |||||||||||||||||||||| |||||    
T  18984565 ttgcatttttcgtcctacctcctatttt 18984538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 39154566 - 39154404
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |    
T  39154566 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttg 39154467  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  || || |||||||||||||| ||| ||||||    
T  39154466 ttgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 26859059 - 26859220
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  26859059 ggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 26859158  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||  ||||| |  ||||| |||||||||||| ||| ||||||||    
T  26859159 tgcatttttcgtcctacctcatattttcaaactccagaaacgcagagaagtaatagttttag 26859220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  154 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  254 tcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 15646190 - 15646353
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||     
T  15646190 taggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcattttt 15646289  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||||  ||||| |  ||||| ||| |||||||||| ||||||||||    
T  15646290 gttgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 145 - 286
Target Start/End: Original strand, 52268289 - 52268430
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||| |    
T  52268289 aggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttg 52268388  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacg 286  Q
    ||||| ||||||||||||| |||||||| | |||||||||||    
T  52268389 ttgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 306
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| |||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  247 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||| |||||||| ||||| |  ||||| |||| ||||| ||| ||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 206 - 320
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  206 ttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttta 305  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||||||| || ||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  306 gacctaccccctatg 320  Q
    |||||||||||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 2733505 - 2733416
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 232  Q
    ||||||||||||| |||||||||||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2733505 ttaggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||||||||||||||||| | |||||| ||||  ||| ||||||||||||||||||||||||  ||| |||| |||||||||| ||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  248 catttttcgtcctac 262  Q
    || ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 17112282 - 17112442
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||| ||| |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  |||||||||||||||||||  |    
T  17112282 ggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcatttttat 17112380  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||| ||||| |  ||||| ||||||||| |||| | ||||||||    
T  17112381 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 221  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 47827141 - 47827037
Alignment:
Q  137 ttaaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 236  Q
    ||||| || |||||||| ||||||||| ||  | ||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||||| ||||||    
T  47827141 ttaaattttggcttaat-acacttttgatctccttgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattat 47827043  T
Q  237 catttt 242  Q
    ||||||    
T  47827042 catttt 47827037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 308
Target Start/End: Complemental strand, 44802720 - 44802555
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||| ||||||||  |||| | || |||||| ||    
T  44802720 ttaggcttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgtt 44802621  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagac 308  Q
      ||||| |||| || |||||||| |||||   ||||| |||| |||| |||| ||| ||||||||    
T  44802620 ttttgcagttttagttctacctcctattttcaactccagaaacacagaaaaatgacaattttagac 44802555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 50419806 - 50419725
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcc 227  Q
    ||||||||| ||||||||||| |||  ||| | || |||||||||| |||||||||| ||||||||  ||||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtcc 50419725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 316
Target Start/End: Complemental strand, 17088688 - 17088516
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 241  Q
    |||||||||||||||||||||||||||   |||||  |  ||||||||| ||||| |||| |||| ||| || |||||||| |||| | || ||| || |    
T  17088688 ttaggcttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatca-aacaaaaccgtccctaaactat-atat 17088591  T
Q  242 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccc 316  Q
    |  ||||| |||| || |||||||| |||||    || | |||||||||||||| ||||||||||||||||||||    
T  17088590 tttttgcagttttagttctacctcctattttcaaatctagaaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 45048253 - 45048330
Alignment:
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||| |||| ||||||||||  |||||   ||||| ||||||| ||||||||||||||||||| ||||| |||||||    
T  45048253 ttgcagttttagtcctacctcatattttcaactccagaaacgcatagaaataacagttttagacttaccctctatgct 45048330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 52235216 - 52235153
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctttt 207  Q
    |||||||||||||||||||| |||||   ||||  || ||||||||||||| ||||||||||||    
T  52235216 taggcttaattacacttttgatcctcagattttaaccaactcacgaaactgatcctgccctttt 52235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 29438929 - 29438983
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  29438929 aggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 29438983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 17088249 - 17088326
Alignment:
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||| |||| ||||||||||| |||||   || || ||| ||||||||||  |||||||||||||||| ||||||||    
T  17088249 ttgcaattttagtcctacctcctattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 148 - 197
Target Start/End: Original strand, 50304441 - 50304490
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 197  Q
    |||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  50304441 cttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 50304490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 17641912 - 17641864
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 197  Q
    ||||||||||||||||||||||  ||||| || |||||||||| |||||    
T  17641912 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtc 17641864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 19830418 - 19830596
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  19830418 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 19830517  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19830518 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 37786766 - 37786943
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |    
T  37786766 aggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 37786865  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37786866 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 146 - 322
Target Start/End: Original strand, 19590525 - 19590701
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 144 - 320
Target Start/End: Complemental strand, 35289448 - 35289272
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35289448 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttg 35289349  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  35289348 gttgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 149 - 322
Target Start/End: Complemental strand, 29100393 - 29100220
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 38858642 - 38858819
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |    
T  38858642 aggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttg 38858741  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  38858742 ttgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 32005159 - 32004985
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  32005159 ggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttttgt 32005060  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32005059 tgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 143 - 320
Target Start/End: Complemental strand, 2659388 - 2659211
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  2659388 ttaggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttt 2659289  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
     |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2659288 tgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 144 - 320
Target Start/End: Complemental strand, 34534338 - 34534162
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||     
T  34534338 taggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcattttt 34534239  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||    
T  34534238 gttgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 149 - 322
Target Start/End: Original strand, 4641443 - 4641616
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||| |||||    
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 19591073 - 19590909
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19591073 ttaggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19590974  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  19590973 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 152 - 315
Target Start/End: Complemental strand, 23953268 - 23953105
Alignment:
Q  152 attacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatt 251  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  252 tttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacccc 23953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 144 - 315
Target Start/End: Complemental strand, 4478247 - 4478076
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||     
T  4478247 taggtttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcattttt 4478148  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    ||||||||||||||| || | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4478147 gttgcatttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacccc 4478076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 38859189 - 38859025
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38859189 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttt 38859090  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  38859089 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 2658837 - 2659000
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     
T  2658837 taggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcattttt 2658936  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||| ||||||| ||||| |  ||||||||||||||||||||  |||||||||    
T  2658937 gttgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 32004612 - 32004774
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||     
T  32004612 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcattttt 32004711  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 305  Q
    ||||||||||||| ||||||||| ||||| |  ||||| |||||||||||||| |||||||||    
T  32004712 gttgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 143 - 304
Target Start/End: Complemental strand, 37787315 - 37787153
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  37787315 ttaggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttt 37787216  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttt 304  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||    
T  37787215 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 34533789 - 34533952
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||| |||||||||||||||     
T  34533789 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcattttt 34533888  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||| |||||||||||| ||||| |  |||||||||||||||||||| ||| ||||||    
T  34533889 gttgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 146 - 305
Target Start/End: Original strand, 35288903 - 35289063
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  35288903 ggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 35289002  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 305  Q
    ||||||||||||||||| ||  ||||| |  ||||| |||| ||||||||| |||||||||    
T  35289003 tgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 19830965 - 19830804
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |    
T  19830965 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttg 19830866  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  19830865 ttgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 23952727 - 23952892
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcc-tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattt 241  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23952727 ttaggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattt 23952826  T
Q  242 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    | ||||||||||||||||||||| | ||||| |  | ||| |||||||||||||| | ||||||||    
T  23952827 tggttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 159 - 272
Target Start/End: Original strand, 29099863 - 29099976
Alignment:
Q  159 ttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtc 258  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  259 ctacctcccatttt 272  Q
    |||||||| |||||    
T  29099963 ctacctcctatttt 29099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 143 - 288
Target Start/End: Original strand, 38160948 - 38161093
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||||||||||  ||||||||||||| |||||    
T  38160948 ttaggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttt 38161047  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
     |||||||||||||||||||  |||||||||| |||||||||||||    
T  38161048 tgttgcatttttcgtcctactccccattttatcctccaaaaacgca 38161093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    || ||||||||||| ||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 144 - 284
Target Start/End: Original strand, 28583437 - 28583577
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||| || ||||| |||||||||||||||||||     
T  28583437 taggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcattttt 28583536  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaa 284  Q
     ||||||||||||||||||| |||||||||| |||||||||    
T  28583537 attgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 287
Target Start/End: Complemental strand, 28584466 - 28584326
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||| ||||| || ||||||||||||||||||||  ||||||||||||||||||| |||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    | |||||||||| |||| |||||||||| ||||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacgc 28584326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 35579333 - 35579256
Alignment:
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||| |||| ||| ||||||| |||||   ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  35579333 ttgcagttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 39137080 - 39137014
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaa 210  Q
    ||||||||||||||||||| ||||||| ||||| ||  ||||||||| |||||||||| ||||||||    
T  39137080 aggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 322
Target Start/End: Original strand, 35578902 - 35579074
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||| | |  ||||| ||  ||||| ||| ||||||||||  ||| |||  ||||||||| ||| |  || |||||| ||  ||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtcata-aactatcatgttttttgc 35579000  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    | ||||  |||||| ||| |||||   ||||| |||||||||||||| ||| ||||||||||| ||||||||||    
T  35579001 agttttaatcctacatcctattttcaactccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 32427461 - 32427397
Alignment:
Q  251 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    |||| ||||| ||||| |||||   ||| |||||||||||||||| |||||||||||||||||||    
T  32427461 ttttagtccttcctcctattttcaactctaaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 34595319 - 34595263
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgc 201  Q
    |||||||||||||||||||||||||   ||||| || |||||||||| |||||||||    
T  34595319 aggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgc 34595263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 49064033 - 49064109
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 221  Q
    ||||||||||||||||||||||||||| ||||| ||  ||||||||| ||||  ||||  ||| ||| |||||||||    
T  49064033 aggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaa 49064109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 787334 - 787279
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||| ||||||||||||||||| ||||| ||||| || |||||||||| |||||||    
T  787334 taggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcct 787279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 322
Target Start/End: Original strand, 9181534 - 9181708
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||||||||    ||||| || |||||||||| |||||||  | |||| |||  ||||||||  |||||| || ||| |||||  |||    
T  9181534 cttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat-attttttttg 9181632  T
Q  248 catttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    || |||| |||||| ||||| ||||    ||||| ||||||| |||||| |||||||||| || ||| ||||||||    
T  9181633 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 7732485 - 7732664
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 241  Q
    ||||||||||||||| |||||||||| |  |||||  | |||||||||| ||||||| || |||||||| | ||||||||  |||||| || ||| || |    
T  7732485 ttaggcttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatc-gaacaaaatcgtccttaaactat-atgt 7732582  T
Q  242 tcgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |  ||||| |||| |||||| ||||| |||||   ||||| ||||||| | |||| |||||||||| || ||| ||||||||    
T  7732583 tttttgcagttttagtcctatctccctattttcaactccataaacgcacataaatgacagttttagtccaaccacctatgct 7732664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 26048492 - 26048439
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||| |||| | |||||| || |||||||||| |||||||    
T  26048492 ggcttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcct 26048439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 27245203 - 27245256
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  27245203 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 27245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 48247584 - 48247640
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||||||| |  |||||  | |||||||||| |||||||    
T  48247584 ttaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcct 48247640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 20741098 - 20741276
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||     
T  20741098 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcattttt 20741197  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  20741198 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 20741276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 15828187 - 15828010
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||| |    
T  15828187 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttg 15828088  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15828087 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 10900475 - 10900299
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  10900475 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 10900376  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10900375 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 18257135 - 18257313
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18257135 taggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 18257234  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  18257235 gttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 11277127 - 11276951
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  11277127 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttttgt 11277028  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  11277027 tgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 28472634 - 28472812
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  28472634 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 28472733  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28472734 tgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 29859823 - 29860001
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  29859823 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttt 29859922  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  29859923 tgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 144 - 320
Target Start/End: Complemental strand, 12935704 - 12935528
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||     
T  12935704 taggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcattttt 12935605  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    ||| |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  12935604 gttacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 11444984 - 11445163
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  11444984 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttt 11445083  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||||||||||||||||||  ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  11445084 tgttgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 147 - 322
Target Start/End: Complemental strand, 31470860 - 31470685
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  31470760 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 146 - 320
Target Start/End: Complemental strand, 1149977 - 1149802
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||    
T  1149977 ggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttttgt 1149878  T
Q  246 tgcatttttcgtcctacctcccattttattctcca-aaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1149877 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 2319669 - 2319832
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2319669 ttaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 2319768  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttag 306  Q
     |||||||||||||||||||| |||||||||||||||| |||||||||||||| | ||||||||    
T  2319769 tgttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 12935154 - 12935318
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12935154 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 12935253  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  12935254 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 149 - 315
Target Start/End: Original strand, 10899942 - 10900109
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    |||||||||||||||||| ||||| |  ||||| |||||||||||||| |||||||||||||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacccc 10900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 11445535 - 11445371
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11445535 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttt 11445436  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  11445435 tgttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 22219901 - 22219737
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22219901 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 22219802  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     |||||||||||||| |||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  22219801 tgttgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 147 - 322
Target Start/End: Complemental strand, 18505463 - 18505288
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| |||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||| | ||| ||||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 23073998 - 23074164
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||            
T  23073998 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattat-------- 23074089  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
       |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23074090 ---catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 144 - 306
Target Start/End: Complemental strand, 23075675 - 23075512
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  23075675 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 23075576  T
Q  244 gttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||| |||||||| | |||||  ||||||||| |||||||||| ||||||||||    
T  23075575 gttgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 149 - 322
Target Start/End: Complemental strand, 2322760 - 2322588
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| | ||||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 146 - 309
Target Start/End: Original strand, 4811372 - 4811535
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||  || |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  4811372 ggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 4811471  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacc 309  Q
    | ||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||    
T  4811472 ttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 18504922 - 18505045
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |    
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  249 atttttcgtcctacctcccatttt 272  Q
    |||||||||||||||||| |||||    
T  18505022 atttttcgtcctacctcctatttt 18505045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 20741650 - 20741485
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca---ttt 241  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||    
T  20741650 aggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttt 20741551  T
Q  242 tcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |  |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  20741550 tttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 145 - 306
Target Start/End: Original strand, 31470314 - 31470476
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||| ||||| |    
T  31470314 aggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttg 31470413  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  31470414 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 145 - 315
Target Start/End: Original strand, 11276589 - 11276760
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||| ||| |||| |||||||||| ||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||| |    
T  11276589 aggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttg 11276688  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    || ||||||||||||||||||| ||||| |  |||||||||||||||||||| |||||||||| ||||||||    
T  11276689 tttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacccc 11276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 18257682 - 18257563
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  18257682 ggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 18257583  T
Q  246 tgcatttttcgtcctacctc 265  Q
    | ||||||||||||||||||    
T  18257582 tacatttttcgtcctacctc 18257563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 148 - 288
Target Start/End: Original strand, 29033436 - 29033577
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  248 catttttcgtcctacctcccattttatt-ctccaaaaacgca 288  Q
    ||  |||| ||||||| |||||||| || |||||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 147 - 272
Target Start/End: Original strand, 15827639 - 15827766
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa--acggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||| ||||||  |||||||||||| ||||||||| |    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  245 ttgcatttttcgtcctacctcccatttt 272  Q
    |||||||||||||||||||||| |||||    
T  15827739 ttgcatttttcgtcctacctcctatttt 15827766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 1149463 - 1149553
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatt 234  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1149463 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 146 - 272
Target Start/End: Complemental strand, 4811801 - 4811675
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||| || |||  ||||||||||||||||||||||||||||||||||||||| ||    
T  4811801 ggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttgt 4811702  T
Q  246 tgcatttttcgtcctacctcccatttt 272  Q
    |||||||||| || ||||||| |||||    
T  4811701 tgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 149 - 282
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||  |||||| |||||||||||| || ||    
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  249 atttttcgtcctacctcccattttattctccaaa 282  Q
    ||||||||||||||| |||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 143 - 287
Target Start/End: Original strand, 18296142 - 18296285
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||| | |||| |||||||||||||| | ||||||| ||| || |  |||||||||||||||||||||||| |||||||| ||||||||||    
T  18296142 ttaggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttt 18296241  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
     |||||||||||||||||||| |||||||||| ||||||||||||    
T  18296242 tgttgcatttttcgtcctacc-cccattttatcctccaaaaacgc 18296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 148 - 288
Target Start/End: Complemental strand, 29035180 - 29035040
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||  |||||| | |||||||||| ||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    |||||||||||| |||  ||||||| | |||||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacgca 29035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 321
Target Start/End: Complemental strand, 35163734 - 35163557
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatca-tttt 242  Q
    ||||||||||||||||||||||| ||  ||||| ||  ||||||||| |||| ||||| |||| ||| || |||||||  |||| | || |||   ||||    
T  35163734 aggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatca-aacaaaatcgtccctaaactatatgtttt 35163636  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgc 321  Q
      ||||| |||| ||||||||||| |||||   |||||||||| ||||||||| |||||||||| ||||||||||||||    
T  35163635 ttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 22534270 - 22534214
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc 202  Q
    |||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||    
T  22534270 ggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 32836542 - 32836367
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||| ||||| |  ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| || ||| || | | || ||  |    
T  32836542 ggcttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgt-atgttttt 32836444  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||| |||| ||||||||| | |||||   || || ||||| |||||||||||||||||||||||||||| ||||||    
T  32836443 tgcagttttagtcctaccttctattttcaacttcagaaacgaagagaaataacagttttagacctaccccttatgct 32836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 5121018 - 5120970
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 191  Q
    |||||||||||||||||||||||||| |  ||||| || ||||||||||    
T  5121018 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaa 5120970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 144 - 320
Target Start/End: Original strand, 11090519 - 11090695
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  11090519 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 11090618  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11090619 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 239350 - 239528
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  239350 ttaggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttt 239448  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  239449 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 40027139 - 40027316
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  40027139 aggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 40027238  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40027239 ttgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 18451379 - 18451200
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  18451379 ttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttt 18451280  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18451279 tgttgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 18451200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 40815893 - 40815714
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  40815893 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttt 40815794  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  40815793 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 22374318 - 22374496
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  22374318 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374417  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||| | ||||||||||||| || |||||||    
T  22374418 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagacctaacctctatgct 22374496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 26538096 - 26538273
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  26538096 aggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttg 26538195  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  26538196 ttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagacctatcctctatgct 26538273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 146 - 320
Target Start/End: Original strand, 28616613 - 28616788
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  28616613 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 28616712  T
Q  246 tgcatttttcgtcctacctcccattttattctcc-aaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    |||| ||||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  28616713 tgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 144 - 322
Target Start/End: Original strand, 1978106 - 1978284
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  1978106 taggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 1978205  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  1978206 gttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 146 - 322
Target Start/End: Original strand, 43058333 - 43058509
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  43058333 ggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 43058432  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  43058433 tgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 3025463 - 3025641
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  3025463 ttaggtttgattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttt 3025562  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||    
T  3025563 tgttgcatttttcgtcctacc-cccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 149 - 319
Target Start/End: Original strand, 14432145 - 14432315
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| | |||||||||||||||||| ||||||||| |||||    
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctat 319  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 143 - 315
Target Start/End: Complemental strand, 26538627 - 26538454
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26538627 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttt 26538528  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
     |||||||||||||||||||| |||||||| |  | ||| |||||||||||||| |||||||||||||||||||    
T  26538527 tgttgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacccc 26538454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 149 - 315
Target Start/End: Complemental strand, 8425902 - 8425736
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    |||||||||| |||| || |||||||||||||||||||||||||||| |||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacccc 8425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 7446894 - 7446730
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7446894 ttaggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 7446795  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  |||||||||||||||||||| ||||||||||    
T  7446794 tgttgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 145 - 306
Target Start/End: Original strand, 18450829 - 18450991
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||      
T  18450829 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcatttttt 18450928  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  18450929 ttgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 145 - 287
Target Start/End: Original strand, 20444748 - 20444890
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  20444748 aggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttg 20444847  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||    
T  20444848 ttgcagttttcgtcctaccccccattttatcctccaaaaacgc 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 16194936 - 16195057
Alignment:
Q  24 tttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaacccaatttagttaaggaagaccaggtatttcatgta 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16194936 tttatgcaaatgcaggggagcacaatccttcttctctcatttaataatcaatatataaatgaaacccaatttagttaaggaagactaggtatttcatgta 16195035  T
Q  124 agtgtaacatgtattaaactta 145  Q
    ||||||||||||||||||||||    
T  16195036 agtgtaacatgtattaaactta 16195057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 139 - 306
Target Start/End: Original strand, 40815338 - 40815506
Alignment:
Q  139 aaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 238  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  40815338 aaactttgtcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatca 40815437  T
Q  239 ttttcgttgcatttttcgtcctacctccca-ttttattctccaaaaacgcagagaaataacagttttag 306  Q
    |||| ||||||||||||||||||||||| | |||||  ||||| |||||||||||||| ||||||||||    
T  40815438 tttttgttgcatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 144 - 306
Target Start/End: Complemental strand, 22374872 - 22374709
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  22374872 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcattttt 22374773  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||||| ||||| |  ||| | ||| |||||||||| ||||||||||    
T  22374772 gttgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 145 - 320
Target Start/End: Original strand, 7446341 - 7446519
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||      
T  7446341 aggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttta 7446440  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacag----ttttagacctaccccctatg 320  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||    |||||||| |||||||||||    
T  7446441 ttgcatttttcgtcatacc-cccattttattctccaaaaacgcagagaaatgacagttaattttagacataccccctatg 7446519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 28617160 - 28616998
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| |    
T  28617160 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttg 28617061  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||| ||||||| ||||| |  ||||| ||||||||||||||| |||||||||    
T  28617060 ttgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 43058880 - 43058717
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  43058880 ttaggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatcatttt 43058781  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  43058780 -gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||| ||||| |  ||||| |||||||| |||||  |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 306
Target Start/End: Complemental strand, 11091067 - 11090904
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |     
T  11091067 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattatt 11090968  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||| ||||||||||||| |||| ||||| |  ||||| ||||||||| |||| ||| ||||||    
T  11090967 gttgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 306
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  247 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    || ||||||||| ||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 1978656 - 1978528
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||     
T  1978656 taggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcattttt 1978557  T
Q  244 gttgcatttttcgtcctacctcccatttt 272  Q
    ||||||||||| ||||||||||| |||||    
T  1978556 gttgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 143 - 287
Target Start/End: Complemental strand, 20440579 - 20440436
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  20440579 ttaggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttt 20440480  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
     |||||| ||||||||||| | |||| ||||| ||||||||||||    
T  20440479 tgttgcagttttcgtcctatccccca-tttatcctccaaaaacgc 20440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 147 - 287
Target Start/End: Complemental strand, 35781207 - 35781067
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||| |||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||||||||||||| | |||||||||| ||||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacgc 35781067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 146 - 287
Target Start/End: Original strand, 35779708 - 35779849
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||| ||    
T  35779708 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcatttttgt 35779807  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||||||| |||||||| |||||||||| ||||||||||||    
T  35779808 tgcattttttgtcctaccccccattttatcctccaaaaacgc 35779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 144 - 264
Target Start/End: Complemental strand, 28847242 - 28847122
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||     
T  28847242 taggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcattttt 28847143  T
Q  244 gttgcatttttcgtcctacct 264  Q
    |||||||||||||||||||||    
T  28847142 gttgcatttttcgtcctacct 28847122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 3026006 - 3025848
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| ||||| ||    
T  3026006 ggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttttgt 3025909  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 305  Q
    ||||||||||||||||||||| ||||| |  ||||| ||| |||||||||| |||||||||    
T  3025908 tgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 149 - 305
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||| | || |||||||||||||||||||||| |||||||||||||||  |||||    
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggt-cttcaattatcatttgtgttgc 8425456  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 305  Q
    |||||||||||||||||| ||||| |  ||||| ||| |||||||||| |||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 14432689 - 14432525
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||| ||| |||||||||| |||||    
T  14432689 ttagccttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttt 14432590  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     |||||||||||| |||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  14432589 tgttgcatttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 148 - 287
Target Start/End: Original strand, 8972239 - 8972378
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||| ||||||||||||||  ||| ||||||||||||||| ||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    |||||||||| ||||| || ||||||| ||||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacgc 8972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 148 - 288
Target Start/End: Original strand, 15551501 - 15551641
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| |||| |||||||||| |||||||  |||||||| |||||||||| ||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    |||||||||||| |||  ||||||||| |||||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacgca 15551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 148 - 286
Target Start/End: Complemental strand, 15552596 - 15552459
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||  ||| ||||||||||||||| ||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacg 286  Q
     |||||||||||||||  |||||||   |||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacg 15552459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 28143578 - 28143400
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||| |||||||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||||||  |||| | || |||||| ||    
T  28143578 ttaggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28143479  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
      ||||| |||| ||||||| ||| |||||   ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  28143478 t-ttgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 304
Target Start/End: Complemental strand, 31797324 - 31797166
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||   ||||| ||  ||||||||| ||||| ||||  ||| |||  ||||||||| |||| | || ||| || ||      
T  31797324 aggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactat-atgtttt 31797226  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagtttt 304  Q
    ||||| |||| ||||||||||| |||||   ||| | |||||||||||||| ||||||||    
T  31797225 ttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 311
Target Start/End: Complemental strand, 14942394 - 14942225
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca--ttt 241  Q
    ||||||||||||||||||||||| |||  ||||| ||  ||||||||| ||||| || |  ||| |||  ||||||||  |||| | ||||||||  |||    
T  14942394 taggcttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgttt 14942295  T
Q  242 tcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagaccta 311  Q
    |  ||||| |||| ||||||| ||| |||||   ||||| ||| ||||||||||  ||||||||||||||    
T  14942294 tttttgcagttttagtcctacatcctattttcaactccagaaatgcagagaaatcgcagttttagaccta 14942225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 42192790 - 42192736
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||||  ||||| || |||||||||| |||||||    
T  42192790 aggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 25336149 - 25336093
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  25336149 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 25336093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 38007947 - 38008003
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  38007947 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 38008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 3822924 - 3822995
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 220  Q
    ||||||||||||||||||||||  ||||  || ||||| |||| || |||||||||||| |||| |||||||    
T  3822924 ttaattacacttttggtcctcgcattttaaccaactcatgaaattgatcctgccctttttaaaccgaacaaa 3822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 4355755 - 4355806
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 197  Q
    ||||||||||||||||||||||| |  ||||| ||||||||||||| |||||    
T  4355755 ggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 62954 - 63032
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 221  Q
    |||||||||||||||||| |||||||    ||||| || |||||||||| ||||||| || ||||||||  ||||||||    
T  62954 ttaggcttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaa 63032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 43216256 - 43216202
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||| ||||| | |||||| || |||||||||| |||||||    
T  43216256 aggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcct 43216202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 6949990 - 6949937
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  6949990 ggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 6949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 20128286 - 20128107
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 241  Q
    |||||||||||||||||||||||||| |  ||||  || |||||||||| ||||||| || |||||||| || |||||||  |||||| || ||| || |    
T  20128286 ttaggcttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatca-aacaaaatcgtccttaaactat-atgt 20128189  T
Q  242 tcgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |  ||||| |||| |||||| ||||| ||||    ||||| ||||||| | |||| |||||||||| || ||| ||||||||    
T  20128188 tttttgcaattttagtcctatctccctatttccaactccagaaacgcacaaaaatgacagttttagtccaaccacctatgct 20128107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 42192240 - 42192293
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||   ||||| || |||||||||| |||||||    
T  42192240 ggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 42192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 11540195 - 11540131
Alignment:
Q  135 tattaaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||  |||||||||||| |||||||||| |||  ||||| || |||||||||| |||||||    
T  11540195 tattaaaaataggcttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcct 11540131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 24140223 - 24140167
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||| ||||||  | ||| || |||||||||| |||||||    
T  24140223 ttaggcttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcct 24140167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 33921161 - 33921105
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  33921161 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 33921105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 44220192 - 44220140
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 197  Q
    |||||||||||||||||| |||||||  ||||| || |||||||||| |||||    
T  44220192 aggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtc 44220140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 7e-83; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 19176838 - 19176659
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176838 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176739  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||    
T  19176738 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 144 - 319
Target Start/End: Original strand, 41681132 - 41681306
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41681132 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttt 41681231  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctat 319  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||||||||    
T  41681232 gttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 138 - 322
Target Start/End: Original strand, 12571855 - 12572040
Alignment:
Q  138 taaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatc 237  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  12571855 taaatttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatc 12571954  T
Q  238 attttcgttgcatttttcgtcct-acctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12571955 atttttgttgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 9930203 - 9930026
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |    
T  9930203 aggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttg 9930104  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  9930103 ttgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 137 - 322
Target Start/End: Complemental strand, 44831799 - 44831614
Alignment:
Q  137 ttaaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattat 236  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  44831799 ttaaaattaggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattat 44831700  T
Q  237 cattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  44831699 catttttgttgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 143 - 320
Target Start/End: Original strand, 11656452 - 11656630
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||    
T  11656452 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttt 11656551  T
Q  243 cgttgcatttttcgtcctacctcccattttattctcc-aaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
     |||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  11656552 tgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctaccccttatg 11656630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 149 - 322
Target Start/End: Original strand, 33328161 - 33328334
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 150 - 322
Target Start/End: Original strand, 13224645 - 13224816
Alignment:
Q  150 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 249  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||| |    
T  13224645 taattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttttgttgaa 13224743  T
Q  250 tttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13224744 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 139 - 322
Target Start/End: Original strand, 31133213 - 31133396
Alignment:
Q  139 aaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 238  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||    
T  31133213 aaacataggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatca 31133312  T
Q  239 ttttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||    
T  31133313 tttttgttgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 9178180 - 9178005
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||| ||||||||| ||    
T  9178180 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatcatttttgt 9178081  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||| || |||| |||||||||||||| |||||||||||||||| ||| ||||||||||||| ||||||||    
T  9178080 tgcatttttcatcttacc-cccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 13225185 - 13225023
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  13225185 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 13225086  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  13225085 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 19176287 - 19176451
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19176287 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19176386  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     |||||||||||||||| |||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  19176387 tgttgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 11657003 - 11656841
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||| |    
T  11657003 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttg 11656904  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  ||||| ||||||||||||||| |||||||||    
T  11656903 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 145 - 306
Target Start/End: Original strand, 44831246 - 44831408
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  44831246 aggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttg 44831345  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  44831346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||  |||| |  ||||| ||||||||||||||  |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 146 - 295
Target Start/End: Complemental strand, 41681679 - 41681529
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  41681679 ggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681580  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaat 295  Q
    ||||||||||||||||||| | ||||| |  ||||| ||||||||||||||    
T  41681579 tgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaat 41681529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 143 - 272
Target Start/End: Complemental strand, 34541096 - 34540967
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  34541096 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttt 34540997  T
Q  243 cgttgcatttttcgtcctacctcccatttt 272  Q
     ||||||||||||||||||||||| |||||    
T  34540996 tgttgcatttttcgtcctacctcctatttt 34540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 143 - 306
Target Start/End: Original strand, 33742919 - 33743082
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  33742919 ttaggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttt 33743017  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     | ||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||||||||    
T  33743018 tgatgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 147 - 305
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  247 gcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 305  Q
    |||||||||||| ||||||| ||||| |  ||||| ||| |||||||||| || ||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||| ||||| |  ||||| ||||||||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 306
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||| |||||||||||||||||||| |||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  248 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||| |||||||||||| |  ||||| ||||||||||||||  |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 193 - 320
Target Start/End: Complemental strand, 33743417 - 33743290
Alignment:
Q  193 tggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagaga 292  Q
    |||| ||||| ||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  293 aataacagttttagacctaccccctatg 320  Q
    |||||||||||||||||||| |||||||    
T  33743317 aataacagttttagacctactccctatg 33743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 149 - 322
Target Start/End: Complemental strand, 4630328 - 4630161
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||| || ||||||||||| |||||||||||| |||||||||  ||||||||||||| | |||||||||||||||||       |||||    
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattatt------gttgc 4630235  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||| ||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 11337069 - 11336959
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||     
T  11337069 taggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcattttt 11336970  T
Q  244 gttgcattttt 254  Q
    |||||||||||    
T  11336969 gttgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 144 - 300
Target Start/End: Original strand, 4629795 - 4629952
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||| |||||||  | ||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||     
T  4629795 taggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcattttt 4629894  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacag 300  Q
     |||||||||||||| ||||||| ||||| |  ||||| ||||||| |||||| ||||    
T  4629895 attgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 287
Target Start/End: Complemental strand, 8074097 - 8073956
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||| || || || ||||||||||||||||||||   |||||||||||||||||| |    
T  8074097 aggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatcatttt-g 8073999  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||||||| ||||  | | |||||||||  ||||||||||||    
T  8073998 ttgcattttacgtcaaaacccccattttaccctccaaaaacgc 8073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 284
Target Start/End: Original strand, 10918123 - 10918264
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||| ||||||||| |||| ||||||||||||||  |||||||||||| ||||| ||||   |||||||||| |||||  ||||||||| |||||||||    
T  10918123 ttaggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttt 10918222  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaa 284  Q
     |||||||||||| || |||| |||||||||| |||||||||    
T  10918223 tgttgcatttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 43958264 - 43958326
Alignment:
Q  225 tccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    |||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||    
T  43958264 tccttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgc 43958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 35427361 - 35427182
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||  ||||| || |||||||||| |||| || ||  ||| |||| ||||||||  |||| | |||||| || ||    
T  35427361 ttaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattat-atatt 35427263  T
Q  243 cgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
      ||||| |||| |||| | ||||| ||||    ||||| ||||||| |||||| |||||||||| || ||| ||||||||    
T  35427262 ttttgcagttttagtcccatctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 9177665 - 9177700
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggc 179  Q
    ||||||||||||||||||||||||||||||||||||    
T  9177665 taggcttaattacacttttggtcctcgtgttttggc 9177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 10919732 - 10919691
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactca 186  Q
    ||||||||||| ||||||||||||||||||||| ||||||||    
T  10919732 aggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 15255850 - 15255906
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  15255850 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 15255906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 18805267 - 18805337
Alignment:
Q  251 ttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgc 321  Q
    |||| ||||||||||| || ||   ||||| |||| ||||||||| |||||||||||| ||||||||||||    
T  18805267 ttttagtcctacctcctatcttcaactccagaaacacagagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 306
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  238 attttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||| |||||||||||| ||| |||||||||||| |  ||||| ||||| |||||||| ||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 6115660 - 6115604
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||| |||||||||||| || ||||| || |||| ||||| |||||||    
T  6115660 ttaggcttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcct 6115604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 28254971 - 28254919
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  28254971 gcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 28254919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 43958206 - 43958254
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaa 191  Q
    |||| |||||||| |||||||||| ||||||||||  ||||||||||||    
T  43958206 ttagacttaattatacttttggtcttcgtgttttgatctactcacgaaa 43958254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 144 - 320
Target Start/End: Original strand, 1665 - 1841
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||     
T  1665 taggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcattttt 1764  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatg 320  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1765 gttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 140 - 306
Target Start/End: Complemental strand, 2218 - 2051
Alignment:
Q  140 aacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2218 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat 2119  T
Q  240 tttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||| ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  2118 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 5e-81; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 146 - 322
Target Start/End: Complemental strand, 11153692 - 11153516
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||    
T  11153692 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttttgt 11153593  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11153592 tgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 12234326 - 12234505
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12234326 ttaggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 12234425  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12234426 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 144 - 316
Target Start/End: Complemental strand, 25447783 - 25447611
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  25447783 taggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcattttt 25447684  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccc 316  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25447683 gttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctaccccc 25447611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 148 - 322
Target Start/End: Original strand, 33109686 - 33109860
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  33109786 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 148 - 322
Target Start/End: Complemental strand, 46193948 - 46193774
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 25937667 - 25937846
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25937667 ttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 25937766  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||||||||| |||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  25937767 tgttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 15523780 - 15523603
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||| |    
T  15523780 aggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttg 15523681  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  15523680 ttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 15523603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 22434724 - 22434547
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  22434724 ttaggtttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccatttt-aaacagaacaaaacggtcattcaattatcatttt 22434626  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22434625 tgttgcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 148 - 315
Target Start/End: Complemental strand, 38962362 - 38962195
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacccc 38962195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 148 - 322
Target Start/End: Original strand, 4219559 - 4219733
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||| ||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 148 - 322
Target Start/End: Original strand, 23494445 - 23494619
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||  |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| | ||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 48526195 - 48526371
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |    
T  48526195 aggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 48526294  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  48526295 ttgcatttttcgtcctacc-cccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 51020794 - 51020973
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||| ||||| |||||||||  | |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51020794 ttaggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttt 51020893  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  51020894 tgttgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 149 - 322
Target Start/End: Complemental strand, 2118837 - 2118665
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||| |||||||||||||| |||| ||||||||||||  |||||||||||| |||||||||||| ||||||||||||||| |||||    
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2118737 atttttcgtcctacc-cccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 145 - 322
Target Start/End: Complemental strand, 22170482 - 22170306
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| || ||||||| |||||||||| |||||||||||| ||||||||||||||| |    
T  22170482 aggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttg 22170384  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  22170383 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 146 - 308
Target Start/End: Original strand, 46193405 - 46193568
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  46193405 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttgt 46193504  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagac 308  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||||    
T  46193505 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 144 - 322
Target Start/End: Complemental strand, 54995614 - 54995437
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||||||||     
T  54995614 taggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatcatttt- 54995516  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||| | |||||||||||||| ||||||||| |||||| | ||||||||||||||| ||||||||    
T  54995515 gttgcatttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 22434179 - 22434340
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22434179 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22434278  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    || |||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  22434279 tgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 146 - 306
Target Start/End: Original strand, 25447247 - 25447408
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25447247 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 25447346  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||| ||||||    
T  25447347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 143 - 322
Target Start/End: Original strand, 45082429 - 45082606
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||| |||||||| ||||||||| ||||||||||| ||||||||||| |||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  45082429 ttaggtttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttt 45082527  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  45082528 tgttgcatttttcgtcctacc-cccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 15523233 - 15523395
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  15523233 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 15523332  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagtttta 305  Q
     |||||||||||||||||||||| ||||| |  ||| | |||||||||||||| |||||||||    
T  15523333 tttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 45082969 - 45082808
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  45082969 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 45082870  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||| ||||| |  ||| | |||||||||||||| ||||||||||    
T  45082869 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 143 - 306
Target Start/End: Complemental strand, 4220107 - 4219943
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||||||||||||||    
T  4220107 ttaggtttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttt 4220008  T
Q  243 cgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
     ||||||||||||||||||||||| ||||| |  || ||||||||||||||||||||||||||||    
T  4220007 tgttgcatttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 140 - 306
Target Start/End: Complemental strand, 20471062 - 20470895
Alignment:
Q  140 aacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcat 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  20471062 aacttaggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcat 20470963  T
Q  240 tttcgttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||| ||||||||||||||||||||||| ||||| |  ||||| |||||||||||||| | ||||||||    
T  20470962 ttttgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 143 - 262
Target Start/End: Complemental strand, 23494991 - 23494872
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23494991 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 23494892  T
Q  243 cgttgcatttttcgtcctac 262  Q
     |||||||||||||||||||    
T  23494891 tgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 12234874 - 12234713
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||    
T  12234874 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 12234775  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||| ||||| |  | ||| ||| |||||||||| ||||||||||    
T  12234774 tgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 54995067 - 54995230
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||     
T  54995067 taggtttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcattttt 54995166  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||| | |||||||| ||||||||||    
T  54995167 gttgcatttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||| ||||| |  ||||| |||| ||||||||| ||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 33110011 - 33109883
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||     
T  33110011 taggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcattttt 33109912  T
Q  244 gttgcatttttcgtcctacctcccatttt 272  Q
    ||||||||||||||||||||||| |||||    
T  33109911 gttgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 144 - 295
Target Start/End: Complemental strand, 51021342 - 51021191
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||     
T  51021342 taggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatcatttt- 51021244  T
Q  244 gttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaat 295  Q
    ||||||||||||||||||||||| ||||| |  ||||| ||||||||||||||    
T  51021243 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaat 51021191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 25938217 - 25938090
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  25938217 aggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttg 25938118  T
Q  245 ttgcatttttcgtcctacctcccatttt 272  Q
    |||||||||| ||||||||||| |||||    
T  25938117 ttgcattttttgtcctacctcctatttt 25938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 145 - 306
Target Start/End: Original strand, 11153145 - 11153307
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||| |    
T  11153145 aggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttg 11153244  T
Q  245 ttgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||||||||||||||||||||| ||||| |  | ||| |||||||||||||| ||||||||||    
T  11153245 ttgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 306
Target Start/End: Original strand, 2118295 - 2118454
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  248 catttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||| ||||| |  || || ||||||||||||||  |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttag 2118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||| |||||| ||||| |  ||||| ||||||||| ||||  |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 147 - 288
Target Start/End: Complemental strand, 20958403 - 20958264
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||| |||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    |||||||| |||||||| |||||||||| |||||||||||||    
T  20958303 gcattttt-gtcctacc-cccattttatcctccaaaaacgca 20958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 18764068 - 18763951
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| ||||| |||||||||    
T  18764068 ttagacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttt 18763969  T
Q  243 cgttgcatttttcgtcct 260  Q
     |||||||||||||||||    
T  18763968 tgttgcatttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  214 gaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 313  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  314 ccctatgct 322  Q
    |||||||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 306
Target Start/End: Original strand, 12503453 - 12503597
Alignment:
Q  163 ggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctac 262  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  12503453 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 12503552  T
Q  263 ctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  12503553 ctcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 147 - 287
Target Start/End: Complemental strand, 44892692 - 44892552
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  |||| |||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacgc 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 164 - 287
Target Start/End: Complemental strand, 43243807 - 43243685
Alignment:
Q  164 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacc 263  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  || |||||||||||||||| ||||||||||| ||||||||    
T  43243807 gtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctacc 43243708  T
Q  264 tcccattttattctccaaaaacgc 287  Q
     |||||||||| ||||||||||||    
T  43243707 -cccattttatcctccaaaaacgc 43243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 144 - 287
Target Start/End: Original strand, 48293592 - 48293735
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |  ||||||||| |||||||  || ||||||||||||||||     
T  48293592 taggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcattttt 48293691  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    |||||||||||| |||| ||  ||||||||||||||||||||||    
T  48293692 gttgcatttttcatcctgccctccattttattctccaaaaacgc 48293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 144 - 288
Target Start/End: Complemental strand, 48713893 - 48713749
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    |||| ||||||||||||||  | |||||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||  |||||||||||||||||||     
T  48713893 taggtttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcattttt 48713794  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    ||||||||||||||||| ||  ||||||||| |||||||||||||    
T  48713793 gttgcatttttcgtcctcccctccattttatcctccaaaaacgca 48713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 35363146 - 35363028
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |||| | |||||||||||| ||||||||||||||| |    
T  35363146 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcatttttg 35363047  T
Q  245 ttgcatttttcgtcctacc 263  Q
    ||||||||||||| |||||    
T  35363046 ttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 48708293 - 48708431
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||     
T  48708293 taggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcattttt 48708392  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaa 282  Q
    ||||||||| |  ||||||| | |||||||| |||||||    
T  48708393 gttgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 149 - 282
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||| |||||||||| ||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   |||||||||||||||||| |||||    
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  249 atttttcgtcctacctcccattttattctccaaa 282  Q
    ||||||||||||||| || ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 164 - 284
Target Start/End: Complemental strand, 43281317 - 43281198
Alignment:
Q  164 gtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacc 263  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||  || |||||||||| ||||| ||||||||||||||||||||    
T  43281317 gtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctacc 43281219  T
Q  264 tcccattttattctccaaaaa 284  Q
     |||||||||| ||| |||||    
T  43281218 ccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 146 - 287
Target Start/End: Complemental strand, 48295088 - 48294946
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||  ||| ||||||||||||||| ||    
T  48295088 ggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcatttttgt 48294989  T
Q  246 tgcattttt-cgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||||||| ||||||||| ||||||||||  |||||||||||    
T  48294988 tgcatttttccgtcctaccccccattttatcttccaaaaacgc 48294946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 146 - 282
Target Start/End: Complemental strand, 16691616 - 16691481
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    |||||||||||||||||| |||  |||||||| ||||||||||||| ||||||||||  |||||| || |||||||  |||||| |||||| ||||| ||    
T  16691616 ggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctgcctctttaaa-cataacaaaattgtcctttaattattatttttgt 16691518  T
Q  246 tgcatttttcgtcctacctcccattttattctccaaa 282  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  16691517 tgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 147 - 287
Target Start/End: Original strand, 44890518 - 44890658
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   ||||| ||||||  |||| |||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||||||| || |||| |||||||||| ||| ||||||||    
T  44890618 gcatttttcatcataccccccattttatcctcaaaaaacgc 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 10258433 - 10258306
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||  ||||  ||  ||||||||||||||| |    
T  10258433 aggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttg 10258334  T
Q  245 ttgcatttttcgtcctacctcccatttt 272  Q
    ||||| |||| ||| |||| || |||||    
T  10258333 ttgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  153 ttacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcattt 252  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||| | | ||||||||||| |||||||  ||||||||||||||| ||| |||||||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  253 ttcgtcctacctcccattttattctccaaaaa 284  Q
    |||||| |||  |||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 216
Target Start/End: Complemental strand, 16318322 - 16318251
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  16318322 aggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 43242328 - 43242411
Alignment:
Q  204 ttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||  |||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacgc 43242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  255 cgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 322
Target Start/End: Original strand, 17503964 - 17504149
Alignment:
Q  136 attaaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 235  Q
    |||||| | ||||||||||| ||| ||||||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||| ||| |||||  || ||    
T  17503964 attaaattaaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aacta 17504062  T
Q  236 tcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||| ||  ||||| |||| ||||||||||| |||||   ||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  17504063 tcatgttttttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 44220861 - 44220781
Alignment:
Q  207 taaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    |||||||||||||||  |||||||| |||||||||| ||| |||||||||| ||||| |  ||||||| ||||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 55189528 - 55189624
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||| | ||||| ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||    
T  55189528 ggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttt 55189624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 35193406 - 35193483
Alignment:
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||| |||| |||||| |||| |||||   || || |||||||||||||| ||||||||||||||||||||||||||    
T  35193406 ttgcagttttagtcctatctcctattttcaacttcagaaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  282 aaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 287
Target Start/End: Complemental strand, 30598065 - 30597925
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctg-cccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||| |||||||||||||||||||||||||| || ||||||| || |||| ||| | |||||||| | ||||||||  |||| | |||||| ||||| |    
T  30598065 ggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-atttttg 30597968  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||| |||| |||||| | || ||||||   |||||||||||    
T  30597967 ttgcacttttggtcctaacccctattttaacatccaaaaacgc 30597925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 55677505 - 55677451
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||||| || ||||| || |||||||||| |||||||    
T  55677505 aggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 44219377 - 44219428
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||||| ||||  || |||||||||| |||||||    
T  44219377 cttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcct 44219428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 46737203 - 46737148
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||| |||||||    
T  46737203 taggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 46737148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 12593572 - 12593518
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtc 197  Q
    |||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  12593572 ttaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtc 12593518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 34789932 - 34789752
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtccttcaattatcattt 241  Q
    |||| ||||||||||||||||||||| |  ||||| || |||||||||| ||||||| || |||||||| | ||||||||  |||| | || |||   ||    
T  34789932 ttagacttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatc-gaacaaaattgtccctaaactatatgtt 34789834  T
Q  242 tcgttgcatttttcgtcctacctccc-attttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |  ||||| |||| |||||| ||||| ||||    ||||||||||||| | |||| |||||||||| || ||| ||||||||    
T  34789833 tttttgcagttttagtcctatctccctatttccaactccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 322
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  289 gagaaataacagttttagacctaccccctatgct 322  Q
    ||||||| ||||||||||||||||||||||||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Complemental strand, 41608969 - 41608908
Alignment:
Q  138 taaacttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||| ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  41608969 taaaattaggcttaattacacttttggtcctaccattttgaccaactcacgaaattggtcct 41608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 33689826 - 33689882
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    |||||||||||||||||||||||||| |  ||||| || |||||| ||| |||||||    
T  33689826 ttaggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcct 33689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 45838544 - 45838600
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||| |||||||||||||||| || ||||| || ||||||| || |||||||    
T  45838544 ttaggcttatttacacttttggtccttgtattttgaccaactcacgtaattggtcct 45838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 151; Significance: 7e-80; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 144 - 322
Target Start/End: Complemental strand, 4754 - 4576
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttc 243  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  4754 taggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcattttt 4655  T
Q  244 gttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4654 gttgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 185 - 306
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  185 cacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccatttt-attctccaaaa 283  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  284 acgcagagaaataacagttttag 306  Q
    | |||||||||| ||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 134221 - 134042
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||| ||||||    
T  134221 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttt 134122  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  134121 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 147; Significance: 2e-77; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 148 - 322
Target Start/End: Original strand, 755 - 928
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt-gttg 853  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 146 - 315
Target Start/End: Complemental strand, 1286 - 1116
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1286 ggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1187  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    ||||| ||||||||||||||| ||||| |  | ||| ||||||||| ||||  |||||||||||| |||||    
T  1186 tgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacccc 1116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 146; Significance: 7e-77; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 145 - 322
Target Start/End: Original strand, 64301 - 64478
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  64301 aggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttg 64400  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  64401 ttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 64478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 64847 - 64689
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||| || | ||||| |  ||||| ||||| ||| |||||||||||||||    
T  64747 atttttcgtcctatcttctattttcaaactccagaaacggagaaaaataacagttttag 64689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 148 - 322
Target Start/End: Complemental strand, 205911 - 205738
Alignment:
Q  148 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttg 247  Q
    ||||||||||||||| ||||||   ||||| || |||||||||| ||||||||||  ||| |||  ||||||||| |||| | || |||||| ||  |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  248 catttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    || |||| ||||||| ||| |||||   ||||||||||||||||||||  |||||||||||||||||||||||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 210884 - 210787
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||   ||||| || ||||| |||| ||||||||||  ||| |||  ||||||||| |||| | || |||||||||    
T  210884 aggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatttt 210787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 143 - 322
Target Start/End: Complemental strand, 42706 - 42528
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  42706 ttaggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttt 42607  T
Q  243 cgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42606 tgtttcatttttcgtcctacc-cccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 149 - 315
Target Start/End: Original strand, 42172 - 42339
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||| || |||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||    
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  249 atttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttagacctacccc 315  Q
    |||||| ||| ||||||| ||||| |  || || |||||||||||||| |||||||||||||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacccc 42339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 149 - 322
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||| ||||||||| ||||||||||||||||    
T  10314 atttttcgtcctacc-cccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 149 - 272
Target Start/End: Original strand, 9935 - 10057
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||| || ||||||||||| | ||||||||| |||||||||||||||| ||| ||| |    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgttac 10034  T
Q  249 atttttcgtcctacctcccatttt 272  Q
    | ||||| |||||||||| |||||    
T  10035 a-ttttcatcctacctcctatttt 10057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 165 - 322
Target Start/End: Original strand, 10640 - 10797
Alignment:
Q  165 tcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacct 264  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  265 cccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 322  Q
     ||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 146 - 306
Target Start/End: Complemental strand, 11168 - 11007
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgt 245  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  11168 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 11069  T
Q  246 tgcatttttcgtcctacctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    ||||||||||||||||||||| ||||| |  ||| | ||||||||||||||  |||||||||    
T  11068 tgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttag 11007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 145 - 313
Target Start/End: Original strand, 18834 - 19001
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||| |    
T  18834 aggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttg 18933  T
Q  245 ttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 313  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18934 ttgcatttttcatcctacc-cccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 19166 - 19070
Alignment:
Q  146 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19166 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 147 - 288
Target Start/End: Original strand, 568 - 709
Alignment:
Q  147 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgtt 246  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||||||||||||| |||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  247 gcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    | ||||||||||  ||||||||||| || |||||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacgca 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 145 - 272
Target Start/End: Complemental strand, 28789 - 28662
Alignment:
Q  145 aggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcg 244  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  28789 aggcataattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 28690  T
Q  245 ttgcatttttcgtcctacctcccatttt 272  Q
    ||||| |||||||||| || ||||||||    
T  28689 ttgcagttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 214 - 322
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  214 gaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgcagagaaataacagttttagacctacc 313  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  314 ccctatgct 322  Q
    |||||||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 306
Target Start/End: Complemental strand, 17024 - 16880
Alignment:
Q  163 ggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctac 262  Q
    ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||    
T  17024 ggtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctac 16925  T
Q  263 ctcccatttt-attctccaaaaacgcagagaaataacagttttag 306  Q
    |||| ||||| |  ||||| |||||||||||||| ||||||||||    
T  16924 ctcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 287
Target Start/End: Complemental strand, 62000 - 61862
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||   || ||||| ||||||||| |||      
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  249 atttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    ||||||||||||||| |||||||| | ||||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacgc 61862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 61026 - 61102
Alignment:
Q  144 taggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaa 220  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||    
T  61026 taggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 150 - 287
Target Start/End: Original strand, 454 - 589
Alignment:
Q  150 taattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgca 249  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  ||||||||||| |||| ||  ||||||||||||||||||| ||||||    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  250 tttttcgtcctacctcccattttattctccaaaaacgc 287  Q
    |||||||||||| | |||||||||| ||| ||||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacgc 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 149 - 249
Target Start/End: Complemental strand, 8551 - 8451
Alignment:
Q  149 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgc 248  Q
    |||||||||||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||| | |||||||||||||||||||||||||| |||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttgc 8452  T
Q  249 a 249  Q
    |    
T  8451 a 8451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 7784 - 7691
Alignment:
Q  195 gtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttcgttgcatttttcgtcctacctcccattttattctccaaaaacgca 288  Q
    ||||| |||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||||||| || ||||||| |||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgca 7691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 171
Target Start/End: Complemental strand, 58 - 30
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgt 171  Q
    |||||||||||||||||||||||||||||    
T  58 ttaggcttaattacacttttggtcctcgt 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0830 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 171
Target Start/End: Complemental strand, 5380 - 5352
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgt 171  Q
    |||||||||||||||||||||||||||||    
T  5380 ttaggcttaattacacttttggtcctcgt 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 46817 - 46761
Alignment:
Q  143 ttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcct 199  Q
    ||||||||||||||||||||||||||    ||||| || |||||||||| |||||||    
T  46817 ttaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcct 46761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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