View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16217_low_5 (Length: 627)

Name: NF16217_low_5
Description: NF16217
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16217_low_5
NF16217_low_5
[»] chr1 (21 HSPs)
chr1 (53-611)||(24119097-24119662)
chr1 (358-408)||(7906377-7906427)
chr1 (358-408)||(9768860-9768910)
chr1 (358-408)||(18003810-18003860)
chr1 (363-403)||(5862127-5862167)
chr1 (358-408)||(18179322-18179372)
chr1 (11-66)||(24119866-24119921)
chr1 (359-397)||(27655057-27655095)
chr1 (358-404)||(37262156-37262202)
chr1 (358-408)||(42908765-42908815)
chr1 (358-408)||(52961133-52961183)
chr1 (363-396)||(3569050-3569083)
chr1 (358-407)||(9410378-9410427)
chr1 (363-408)||(42801873-42801918)
chr1 (324-357)||(47141865-47141898)
chr1 (358-408)||(9527419-9527470)
chr1 (324-358)||(4605901-4605935)
chr1 (363-405)||(7015743-7015785)
chr1 (358-396)||(13941325-13941363)
chr1 (324-358)||(18179330-18179364)
chr1 (358-410)||(4511576-4511628)
[»] chr5 (18 HSPs)
chr5 (355-408)||(3535984-3536037)
chr5 (358-402)||(38040143-38040187)
chr5 (358-409)||(25660905-25660956)
chr5 (358-404)||(11246545-11246591)
chr5 (358-408)||(38040260-38040310)
chr5 (358-407)||(31907646-31907695)
chr5 (358-407)||(35813293-35813342)
chr5 (356-408)||(40250226-40250278)
chr5 (358-409)||(34325258-34325309)
chr5 (363-402)||(41405144-41405183)
chr5 (358-408)||(13862119-13862169)
chr5 (355-397)||(17178270-17178312)
chr5 (363-408)||(20735231-20735277)
chr5 (324-358)||(35813301-35813335)
chr5 (358-396)||(42781645-42781683)
chr5 (358-410)||(9963407-9963460)
chr5 (324-357)||(17178281-17178314)
chr5 (363-408)||(27006334-27006379)
[»] chr7 (18 HSPs)
chr7 (358-408)||(38032906-38032956)
chr7 (364-408)||(27726426-27726470)
chr7 (363-404)||(17305446-17305487)
chr7 (358-408)||(21285404-21285455)
chr7 (358-408)||(33202605-33202656)
chr7 (324-358)||(3246545-3246579)
chr7 (363-413)||(7392362-7392412)
chr7 (363-409)||(32514692-32514738)
chr7 (358-408)||(35195837-35195887)
chr7 (358-404)||(43209399-43209445)
chr7 (358-408)||(48174961-48175011)
chr7 (363-404)||(3246542-3246583)
chr7 (363-404)||(8147242-8147283)
chr7 (358-407)||(25304173-25304222)
chr7 (363-408)||(38363153-38363198)
chr7 (358-391)||(43712364-43712397)
chr7 (363-391)||(1513498-1513526)
chr7 (358-414)||(37410532-37410588)
[»] chr6 (25 HSPs)
chr6 (358-408)||(9031760-9031810)
chr6 (359-408)||(6219348-6219397)
chr6 (358-408)||(10455736-10455786)
chr6 (358-408)||(30833011-30833061)
chr6 (358-408)||(34524869-34524919)
chr6 (355-408)||(4078655-4078709)
chr6 (355-405)||(9422830-9422880)
chr6 (363-408)||(6455447-6455492)
chr6 (363-407)||(8309159-8309203)
chr6 (358-408)||(2945589-2945640)
chr6 (363-409)||(33628994-33629041)
chr6 (358-408)||(2955155-2955205)
chr6 (358-408)||(8175990-8176040)
chr6 (324-358)||(9422835-9422869)
chr6 (358-408)||(17176143-17176193)
chr6 (358-408)||(17305510-17305560)
chr6 (358-408)||(22730753-22730803)
chr6 (358-408)||(25064720-25064770)
chr6 (324-358)||(31639143-31639177)
chr6 (358-391)||(4844154-4844187)
chr6 (354-391)||(17751384-17751421)
chr6 (358-391)||(20858434-20858467)
chr6 (324-357)||(20858442-20858475)
chr6 (362-399)||(31595174-31595211)
chr6 (363-407)||(19135924-19135968)
[»] chr3 (21 HSPs)
chr3 (358-415)||(16874241-16874298)
chr3 (356-411)||(51412039-51412094)
chr3 (363-402)||(12143463-12143502)
chr3 (324-358)||(3461783-3461817)
chr3 (358-408)||(19137613-19137663)
chr3 (363-404)||(30745787-30745828)
chr3 (356-396)||(51017796-51017836)
chr3 (358-409)||(3973295-3973346)
chr3 (358-409)||(3996530-3996581)
chr3 (360-411)||(7020765-7020816)
chr3 (362-405)||(38507645-38507688)
chr3 (358-408)||(41767819-41767870)
chr3 (358-396)||(4045685-4045723)
chr3 (328-358)||(6951853-6951883)
chr3 (358-408)||(12236593-12236643)
chr3 (358-408)||(24130553-24130603)
chr3 (363-408)||(16006664-16006709)
chr3 (324-357)||(24890076-24890109)
chr3 (363-408)||(40160729-40160774)
chr3 (358-402)||(4010069-4010113)
chr3 (358-409)||(14868677-14868729)
[»] chr8 (20 HSPs)
chr8 (358-409)||(14011089-14011140)
chr8 (358-408)||(14012605-14012656)
chr8 (358-408)||(32940365-32940415)
chr8 (358-408)||(39432379-39432429)
chr8 (363-407)||(28979021-28979065)
chr8 (363-405)||(216203-216245)
chr8 (363-405)||(220418-220460)
chr8 (363-405)||(689573-689615)
chr8 (363-405)||(692763-692805)
chr8 (363-405)||(696972-697014)
chr8 (363-405)||(729826-729868)
chr8 (363-405)||(734041-734083)
chr8 (363-405)||(853721-853763)
chr8 (363-405)||(857937-857979)
chr8 (324-358)||(18577115-18577149)
chr8 (324-358)||(37989100-37989134)
chr8 (355-409)||(41793021-41793074)
chr8 (358-407)||(26657851-26657900)
chr8 (359-396)||(36593200-36593237)
chr8 (357-397)||(20784701-20784741)
[»] scaffold0168 (1 HSPs)
scaffold0168 (358-408)||(34084-34134)
[»] chr4 (26 HSPs)
chr4 (358-408)||(49039496-49039546)
chr4 (358-408)||(15185072-15185122)
chr4 (358-404)||(15853820-15853866)
chr4 (324-358)||(17431379-17431413)
chr4 (358-408)||(20166310-20166360)
chr4 (358-408)||(38657534-38657584)
chr4 (358-408)||(41492549-41492599)
chr4 (356-402)||(53180401-53180447)
chr4 (363-408)||(12585615-12585660)
chr4 (358-402)||(20610739-20610783)
chr4 (358-409)||(36008267-36008319)
chr4 (358-412)||(2565250-2565305)
chr4 (363-406)||(9062172-9062215)
chr4 (358-408)||(40150466-40150517)
chr4 (358-408)||(48512192-48512243)
chr4 (358-408)||(48968261-48968312)
chr4 (359-402)||(53621200-53621243)
chr4 (324-358)||(56919-56953)
chr4 (358-408)||(49743356-49743406)
chr4 (324-358)||(53621202-53621236)
chr4 (358-408)||(54854230-54854280)
chr4 (363-408)||(39449394-39449439)
chr4 (358-391)||(42432019-42432052)
chr4 (363-391)||(56916-56944)
chr4 (358-409)||(12820456-12820508)
chr4 (358-401)||(31480271-31480315)
[»] chr2 (13 HSPs)
chr2 (358-408)||(13294435-13294485)
chr2 (363-410)||(36277758-36277805)
chr2 (356-392)||(34376552-34376588)
chr2 (358-405)||(9419031-9419078)
chr2 (365-408)||(22355077-22355120)
chr2 (358-405)||(39334932-39334979)
chr2 (358-408)||(1244563-1244613)
chr2 (371-405)||(35352474-35352508)
chr2 (370-404)||(35694842-35694876)
chr2 (362-404)||(42211518-42211560)
chr2 (375-411)||(2145775-2145811)
chr2 (363-407)||(6496434-6496478)
chr2 (357-405)||(32944059-32944107)
[»] scaffold0712 (1 HSPs)
scaffold0712 (358-404)||(4518-4564)
[»] scaffold0709 (1 HSPs)
scaffold0709 (358-404)||(4538-4584)
[»] scaffold0118 (1 HSPs)
scaffold0118 (358-405)||(37379-37426)
[»] scaffold0247 (1 HSPs)
scaffold0247 (363-397)||(20728-20762)


Alignment Details
Target: chr1 (Bit Score: 459; Significance: 0; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 53 - 611
Target Start/End: Complemental strand, 24119662 - 24119097
Alignment:
Q  53 ttctcaatttatatttaataacaattctactatatatgtagcaaaatatttgctaaaaataaaacaacagagagaatgatgtacnnnnnnnaacaaaacc 152  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||    
T  24119662 ttctgaatttatatttaataacaattctactatatatgtagcaaaatatttgctaaaaataaaacaacagagagaatgatgtactttttt-aacaaaacc 24119564  T
Q  153 aattaattaaatcaataccaaatgcttaatgcatcatttgtcacattttgtcatattaattacttagacacttacatgacaaaatcatattaacatgcat 252  Q
    ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24119563 aattaa----atcaataccaaatgcttaatgcatcatttgtcacattttgtcatattaattacttagacacttacatgacaaaatcatattaacatgcat 24119468  T
Q  253 gttcaacaatttgcatagagtttaattagtgctctacactttcatatattgttgtatgacatttgctaggttaacaatgcatgt------------ccct 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||    
T  24119467 gttcaacaatttgcatagagtttaattagtgctctacactttcatatattgttgtatgacatttgctaggttaacaatgcatgtaacaatgcatgtccct 24119368  T
Q  341 gtcaactgagttatgctcctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacgtttgatatagtgatttaattaatgaatgaag 440  Q
    ||||| |||| |||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24119367 gtcaattgagctatgctcctgcatataacaatgcatgtccttgtcaactgaactatgttcacggggacgtttgatatagtgatttaattaatgaatgaag 24119268  T
Q  441 gtatagtaaaaatggagaaggtacttacgaatcatatcatcatcactaaatggtttggtatcagcaatttgatcaggaggcatagtgaaaccagtgaatc 540  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24119267 gtatagtaaaaatggagaaggtacttacgaatcatatcatcatcactaaatggtttggtatcagcaatttgatcaggaggcatagtgaaaccagtgaagc 24119168  T
Q  541 caaatgagagacccaagctggcacttgaagcacgactaagagcagcaccactacccaactcatcaaaatca 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24119167 caaatgagagacccaagctggcacttgaagcacgactaagagcagcaccactacccaactcatcaaaatca 24119097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 7906377 - 7906427
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||||||||    
T  7906377 cctgcatataacaatgcatgtccctaccaactgaactatgctcacggggac 7906427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 9768860 - 9768910
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  9768860 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggggac 9768910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 18003860 - 18003810
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  18003860 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggggac 18003810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 5862167 - 5862127
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacg 403  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  5862167 atataacaatgcatgtccctgccaactgagctatgttcacg 5862127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 18179372 - 18179322
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||||||||||||||||||  |||| ||||||||||    
T  18179372 cctgcatataacaatgcatgtccctgccaactgagttatgctcacggggac 18179322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 24119921 - 24119866
Alignment:
Q  11 cataggggcacgaagcataaggcatgggcaacnnnnnnncttttctcaatttatat 66  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  24119921 cataggggcacgaagcataaggcatgggcaactttttttcttttctcaatttatat 24119866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 397
Target Start/End: Original strand, 27655057 - 27655095
Alignment:
Q  359 ctgtatataacaatgcatgtccctgccaactgaactatg 397  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  27655057 ctgtatataacaattcatgtccctgccaactgaactatg 27655095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 37262156 - 37262202
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  37262156 cctgcatataacaacgcatgtccctgccaactgaactatgctcacgg 37262202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 42908815 - 42908765
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||| | ||||||||||    
T  42908815 cctgcatataacaatgcatgtccctgccaactgagctaagctcacggggac 42908765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 52961133 - 52961183
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||||||| |||||||||| ||||| ||||||||||    
T  52961133 cctgcatataacaatgcatgtccttgccaactgagctatgctcacggggac 52961183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 396
Target Start/End: Complemental strand, 3569083 - 3569050
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactat 396  Q
    ||||||||||||||||||||||||||||||||||    
T  3569083 atataacaatgcatgtccctgccaactgaactat 3569050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 9410378 - 9410427
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    |||| ||||||| |||||||||| |||||||||||||||| |||||||||    
T  9410378 cctgcatataactatgcatgtccttgccaactgaactatgctcacgggga 9410427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 42801918 - 42801873
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  42801918 atataacaatgcatgtctctgtcaactgagctatgttcacggggac 42801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 47141865 - 47141898
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgct 357  Q
    ||||||||||||||||||||||||||||||||||    
T  47141865 taacaatgcatgtccctgtcaactgagttatgct 47141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 9527470 - 9527419
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  9527470 cctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 9527419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 4605901 - 4605935
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    |||||||||||||| ||||||||||||||||||||    
T  4605901 taacaatgcatgtctctgtcaactgagttatgctc 4605935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 7015743 - 7015785
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||    
T  7015743 atataacaatgcatgtcccagccaactgagctatgctcacggg 7015785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 396
Target Start/End: Complemental strand, 13941363 - 13941325
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactat 396  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  13941363 cctgcatataacaatgcatgtccttgccaactgaactat 13941325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 18179364 - 18179330
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    |||||||||||||||||| ||||||||||||||||    
T  18179364 taacaatgcatgtccctgccaactgagttatgctc 18179330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 4511576 - 4511628
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacgt 410  Q
    |||| |||||| ||||||||||| |||||| |||  |||||||||||||||||    
T  4511576 cctgcatataataatgcatgtccttgccaattgagttatgttcacggggacgt 4511628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 355 - 408
Target Start/End: Original strand, 3535984 - 3536037
Alignment:
Q  355 gctcctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3535984 gctcctgtatataacaatgcatgtccctgccaactgaactatgctcacggggac 3536037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 38040143 - 38040187
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcac 402  Q
    |||| |||||||||||||||||| |||||||||||||||||||||    
T  38040143 cctgcatataacaatgcatgtccttgccaactgaactatgttcac 38040187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 25660956 - 25660905
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacg 409  Q
    |||| |||||||||||||| |||||||||||||| ||||| |||||||||||    
T  25660956 cctgcatataacaatgcatatccctgccaactgagctatgctcacggggacg 25660905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 404
Target Start/End: Original strand, 11246545 - 11246591
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  11246545 cctgcatataacaatgcatgtccctgccaactgagctatgctcacgg 11246591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 38040310 - 38040260
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  38040310 cctgcatataacaatgcatgtccctgccaactgagctatgctcatggggac 38040260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 31907695 - 31907646
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    |||| |||||||||||||||||||||| |||||| |||| ||||||||||    
T  31907695 cctgcatataacaatgcatgtccctgcaaactgacctatattcacgggga 31907646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 35813293 - 35813342
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    |||| ||||||||||||||||||||| ||||||| ||||| |||||||||    
T  35813293 cctgcatataacaatgcatgtccctgtcaactgagctatgctcacgggga 35813342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 408
Target Start/End: Original strand, 40250226 - 40250278
Alignment:
Q  356 ctcctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||||| ||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  40250226 ctcctgcatataacaatgcatgttactgccaactgagctatgctcacggggac 40250278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 34325309 - 34325258
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacg 409  Q
    |||| |||||| |||||||||||||| ||||||| | |||||||||||||||    
T  34325309 cctgcatataataatgcatgtccctgtcaactgagccatgttcacggggacg 34325258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 402
Target Start/End: Original strand, 41405144 - 41405183
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcac 402  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  41405144 atataacaatgcatgtccctgtcaactgaactatgctcac 41405183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 13862169 - 13862119
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||| ||| || ||||||||||||| ||||||||||    
T  13862169 cctgcatataacaatgcatatccatgtcaactgaactatgctcacggggac 13862119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Original strand, 17178270 - 17178312
Alignment:
Q  355 gctcctgtatataacaatgcatgtccctgccaactgaactatg 397  Q
    |||||| |||||||||||||||||||||| ||||||| |||||    
T  17178270 gctcctatatataacaatgcatgtccctgtcaactgagctatg 17178312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 20735231 - 20735277
Alignment:
Q  363 atataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  20735231 atataataatgcattgtccctgccaactgagctatgttcacggggac 20735277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 35813301 - 35813335
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    ||||||||||||||||||||||||||| |||||||    
T  35813301 taacaatgcatgtccctgtcaactgagctatgctc 35813335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 42781645 - 42781683
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactat 396  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  42781645 cctgcatataacaatgcatgtccctgccaactgagctat 42781683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 410
Target Start/End: Complemental strand, 9963460 - 9963407
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggacgt 410  Q
    |||| |||||||||||||| ||||||||||||||| ||||  ||||||||||||    
T  9963460 cctgcatataacaatgcattgtccctgccaactgagctatactcacggggacgt 9963407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 17178281 - 17178314
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgct 357  Q
    ||||||||||||||||||||||||||| ||||||    
T  17178281 taacaatgcatgtccctgtcaactgagctatgct 17178314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 27006379 - 27006334
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||||||| |||||||| |||| ||||| ||||||||||    
T  27006379 atataacaatgcatgcccctgccatctgacctatgctcacggggac 27006334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 38032906 - 38032956
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  38032906 cctgtatataacaatgcatgtccctgccaactgagttatgttcacggggac 38032956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 27726426 - 27726470
Alignment:
Q  364 tataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  27726426 tataataatgcatgtccctgccaactgagctatgttcacggggac 27726470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 17305446 - 17305487
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  17305446 atataacaatgcatgtccctgccaactgagctatgctcacgg 17305487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 21285404 - 21285455
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  21285404 cctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 21285455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 33202605 - 33202656
Alignment:
Q  358 cctgtatataacaatgca-tgtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||||||| || ||||||||||||||||  |||||||||||||||    
T  33202605 cctgtatataacaatacaatgtccctgccaactgagttatgttcacggggac 33202656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 3246545 - 3246579
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    ||||||||||||||||||||||||||| |||||||    
T  3246545 taacaatgcatgtccctgtcaactgagctatgctc 3246579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 413
Target Start/End: Original strand, 7392362 - 7392412
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggacgtttg 413  Q
    |||||||||||||||| |||||||| ||| ||||| |||||||||| ||||    
T  7392362 atataacaatgcatgttcctgccaattgagctatgctcacggggacatttg 7392412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 32514692 - 32514738
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggacg 409  Q
    |||||| ||| |||||| ||||||||||||||||| |||||||||||    
T  32514692 atataataatacatgtctctgccaactgaactatgctcacggggacg 32514738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 35195887 - 35195837
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||| |||||||||||||||||||||| ||||| | ||||||||    
T  35195887 cctgcatataataatgcatgtccctgccaactgagctatgcttacggggac 35195837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 43209445 - 43209399
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    |||| |||||||||||||||| ||||||||||||  |||||||||||    
T  43209445 cctgcatataacaatgcatgttcctgccaactgagttatgttcacgg 43209399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 48175011 - 48174961
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||| ||||||||||| |||||||||| ||||  ||||||||||    
T  48175011 cctgtatataataatgcatgtccttgccaactgagctatactcacggggac 48174961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 3246542 - 3246583
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||    
T  3246542 atataacaatgcatgtccctgtcaactgagctatgctcacgg 3246583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 8147242 - 8147283
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||    
T  8147242 atataacaatgcatgtccctgccaattgagctatgctcacgg 8147283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 25304222 - 25304173
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    |||| |||||||||| ||||| |||||||||||||||| | |||||||||    
T  25304222 cctgcatataacaattcatgttcctgccaactgaactacgctcacgggga 25304173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 38363198 - 38363153
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||| |||| |||||||| ||||||||| ||||||||||    
T  38363198 atataacaatgtatgttcctgccaattgaactatgctcacggggac 38363153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 391
Target Start/End: Original strand, 43712364 - 43712397
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactga 391  Q
    ||||||||||||||||||||||||| ||||||||    
T  43712364 cctgtatataacaatgcatgtccctaccaactga 43712397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 391
Target Start/End: Complemental strand, 1513526 - 1513498
Alignment:
Q  363 atataacaatgcatgtccctgccaactga 391  Q
    |||||||||||||||||||||||||||||    
T  1513526 atataacaatgcatgtccctgccaactga 1513498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 414
Target Start/End: Original strand, 37410532 - 37410588
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacgtttga 414  Q
    |||| |||||||||||||||||| | |||||||| ||||| |||||| ||| |||||    
T  37410532 cctgcatataacaatgcatgtccttaccaactgagctatgctcacggagacttttga 37410588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 9031810 - 9031760
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  9031810 cctgcatataacaatgcatgtccctgccaactgagctatgttcacggggac 9031760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 359 - 408
Target Start/End: Complemental strand, 6219397 - 6219348
Alignment:
Q  359 ctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  6219397 ctgtatataataatgcatgtccctgccaactgagctatgttcacggggac 6219348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 10455786 - 10455736
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||||||||    
T  10455786 cctgcatataacaatgcatgttcctgccaactgaactatgctcacggggac 10455736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 30833061 - 30833011
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  30833061 cctgcatataacaatgcatgtccctgccaactgaactatgctcatggggac 30833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 34524919 - 34524869
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  34524919 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggggac 34524869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 408
Target Start/End: Complemental strand, 4078709 - 4078655
Alignment:
Q  355 gctcctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    ||||| |||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  4078709 gctccagtatataacaatgcattgtccatgccaactgaactatgctcacggggac 4078655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 9422880 - 9422830
Alignment:
Q  355 gctcctgtatataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    |||| ||||||||||||||||||||||||||||||||  |||| |||||||    
T  9422880 gctcttgtatataacaatgcatgtccctgccaactgagttatgctcacggg 9422830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 6455492 - 6455447
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||||| |||| |||||||| |||||||||||||||||||||||||    
T  6455492 atataataatgtatgtccctaccaactgaactatgttcacggggac 6455447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 8309203 - 8309159
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    ||||||||||||||||||||||||||||| ||||| ||| |||||    
T  8309203 atataacaatgcatgtccctgccaactgagctatgctcatgggga 8309159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 2945640 - 2945589
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  2945640 cctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 2945589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 33628994 - 33629041
Alignment:
Q  363 atataacaatgcat-gtccctgccaactgaactatgttcacggggacg 409  Q
    |||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  33628994 atataataatgcattgtccctgccaactgagctatgttcacggggacg 33629041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 2955155 - 2955205
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||| |||||||||||||| || |||||||||| ||||||||||    
T  2955155 cctgcatataataatgcatgtccctggcatctgaactatgctcacggggac 2955205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 8176040 - 8175990
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||| ||| ||||||| ||||| ||||||||||    
T  8176040 cctgcatataacaatgcatgtctctgtcaactgagctatgctcacggggac 8175990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 9422869 - 9422835
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    |||||||||||||||||| ||||||||||||||||    
T  9422869 taacaatgcatgtccctgccaactgagttatgctc 9422835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 17176193 - 17176143
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| ||| ||||    
T  17176193 cctgcatataacaatgcatgtccctgtcaactgagctatgtttacgaggac 17176143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 17305560 - 17305510
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||| ||||||||||||| ||||||||  |||||||||||||||    
T  17305560 cctgcatataataatgcatgtccctaccaactgagttatgttcacggggac 17305510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 22730753 - 22730803
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||| |||||||||||  |||| ||||||||||    
T  22730753 cctgcatataacaatgcatgtctctgccaactgagttatgctcacggggac 22730803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 25064720 - 25064770
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||| ||||||||||| | |||||||||||||| ||||||||||    
T  25064720 cctgcatataataatgcatgtccataccaactgaactatgctcacggggac 25064770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 31639177 - 31639143
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    ||||||||| |||||||||||||||||||||||||    
T  31639177 taacaatgcgtgtccctgtcaactgagttatgctc 31639143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 391
Target Start/End: Complemental strand, 4844187 - 4844154
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactga 391  Q
    |||| |||||||||||||||||||||||||||||    
T  4844187 cctgcatataacaatgcatgtccctgccaactga 4844154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 354 - 391
Target Start/End: Original strand, 17751384 - 17751421
Alignment:
Q  354 tgctcctgtatataacaatgcatgtccctgccaactga 391  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  17751384 tgctcctgcatataacaatgcatgtccatgccaactga 17751421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 391
Target Start/End: Original strand, 20858434 - 20858467
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactga 391  Q
    |||| |||||||||||||||||||||||||||||    
T  20858434 cctgcatataacaatgcatgtccctgccaactga 20858467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Original strand, 20858442 - 20858475
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgct 357  Q
    |||||||||||||||||| |||||||||||||||    
T  20858442 taacaatgcatgtccctgccaactgagttatgct 20858475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 31595211 - 31595174
Alignment:
Q  362 tatataacaatgcatgtccctgccaactgaactatgtt 399  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  31595211 tatataacaatgcatgtccctgacaattgaactatgtt 31595174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 19135968 - 19135924
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    |||||| ||||||||||||||||||| || ||||| |||||||||    
T  19135968 atataataatgcatgtccctgccaaccgagctatgctcacgggga 19135924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 358 - 415
Target Start/End: Original strand, 16874241 - 16874298
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacgtttgat 415  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||||||||| ||||||    
T  16874241 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggggacatttgat 16874298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 51412039 - 51412094
Alignment:
Q  356 ctcctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacgtt 411  Q
    |||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  51412039 ctcctgcatataacaatgcatgtccctgccaactgaactatgcttacgaggacgtt 51412094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 363 - 402
Target Start/End: Original strand, 12143463 - 12143502
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcac 402  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  12143463 atataacaatgcatgtccctgccaactgagctatgttcac 12143502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 3461783 - 3461817
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    |||||||||||||||||||||||||||||||||||    
T  3461783 taacaatgcatgtccctgtcaactgagttatgctc 3461817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 19137663 - 19137613
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||||| |||||||||||| ||||| ||||||||||    
T  19137663 cctgcatataacaatgcatgttcctgccaactgagctatgctcacggggac 19137613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 30745787 - 30745828
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  30745787 atataacaatgcatgtccctgccaactgagctatgctcacgg 30745828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 396
Target Start/End: Complemental strand, 51017836 - 51017796
Alignment:
Q  356 ctcctgtatataacaatgcatgtccctgccaactgaactat 396  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  51017836 ctcctgcatataacaatgcatgtccctgccaactgagctat 51017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 3973346 - 3973295
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacg 409  Q
    |||| |||||||||||||||||||| |||||||| ||||| |||||| ||||    
T  3973346 cctgcatataacaatgcatgtccctaccaactgagctatgctcacggagacg 3973295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 3996530 - 3996581
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacg 409  Q
    |||| |||||||||||||||||||| |||||||| ||||| |||||| ||||    
T  3996530 cctgcatataacaatgcatgtccctaccaactgagctatgctcacggagacg 3996581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 411
Target Start/End: Complemental strand, 7020816 - 7020765
Alignment:
Q  360 tgtatataacaatgcatgtccctgccaactgaactatgttcacggggacgtt 411  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||| |||||||    
T  7020816 tgtatataataatgcatgtctctgccaactgatctatgctcacgaggacgtt 7020765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 405
Target Start/End: Complemental strand, 38507688 - 38507645
Alignment:
Q  362 tatataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||| |||||||||||||||||||||| ||||| |||||||    
T  38507688 tatataataatgcatgtccctgccaactgagctatgctcacggg 38507645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 41767819 - 41767870
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||| || |||||||||||||||||| ||||||||||    
T  41767819 cctgcatataacaatgcattgttcctgccaactgaactatgctcacggggac 41767870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 4045685 - 4045723
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactat 396  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  4045685 cctgcatataacaatgcatgtccctgtcaactgaactat 4045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 358
Target Start/End: Original strand, 6951853 - 6951883
Alignment:
Q  328 aatgcatgtccctgtcaactgagttatgctc 358  Q
    |||||||||||||||||||||||||||||||    
T  6951853 aatgcatgtccctgtcaactgagttatgctc 6951883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 12236643 - 12236593
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||| |||||||||||||||||||||| ||| | ||||||||||    
T  12236643 cctgcatataataatgcatgtccctgccaactgagctacgctcacggggac 12236593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 24130603 - 24130553
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||| |||||||||||||||||  |||| ||||||||||    
T  24130603 cctgcatataacaatgtatgtccctgccaactgagttatgctcacggggac 24130553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 16006709 - 16006664
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||||| ||||||||||||| |||||||||||||||| | ||||||    
T  16006709 atataataatgcatgtcccttccaactgaactatgtttatggggac 16006664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 357
Target Start/End: Complemental strand, 24890109 - 24890076
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgct 357  Q
    ||||||||||||||| ||||||||||||||||||    
T  24890109 taacaatgcatgtccttgtcaactgagttatgct 24890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 40160774 - 40160729
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||||||||||||||||| ||| ||||| ||||| ||||    
T  40160774 atataacaatgcatgtccctgccaattgagctatgctcacgaggac 40160729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 4010069 - 4010113
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcac 402  Q
    |||| |||||||||||||||||||| |||||||| ||||| ||||    
T  4010069 cctgcatataacaatgcatgtccctaccaactgagctatgctcac 4010113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 14868729 - 14868677
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggacg 409  Q
    |||| |||||| ||||||| ||||||||||||||| ||||| |||||||||||    
T  14868729 cctgcatataataatgcattgtccctgccaactgagctatgctcacggggacg 14868677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 14011089 - 14011140
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacg 409  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  14011089 cctgcatataacaatgcatgtccctgccaactgaactatgctcacagggacg 14011140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 14012656 - 14012605
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||| ||||||||||||||||||||| ||||||||||    
T  14012656 cctgcatataacaatgcattgtccctgccaactgaactatgctcacggggac 14012605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 32940365 - 32940415
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||||||||||||||||||||||||| ||||||| ||||  ||||||||||    
T  32940365 cctgtatataacaatgcatgtccctgtcaactgagctatactcacggggac 32940415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 39432379 - 39432429
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||| |||||||||||||||||||| ||||| ||||||||||    
T  39432379 cctgcatataacattgcatgtccctgccaactgagctatgctcacggggac 39432429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 28979065 - 28979021
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||    
T  28979065 atataacaatgcatgtccctatcaactgaactatgctcacgggga 28979021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 216203 - 216245
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||    
T  216203 atataacaatgtatgtccctgccaactgagctatgctcacggg 216245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 220418 - 220460
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    |||||||| |||||||||||||||||||| ||||| |||||||    
T  220418 atataacattgcatgtccctgccaactgagctatgctcacggg 220460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 689573 - 689615
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    |||||||| |||||||||||||||||||| ||||| |||||||    
T  689573 atataacattgcatgtccctgccaactgagctatgctcacggg 689615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 692763 - 692805
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||    
T  692763 atataacaatgtatgtccctgccaactgagctatgctcacggg 692805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 696972 - 697014
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||    
T  696972 atataacaatgtatgtccctgccaactgagctatgctcacggg 697014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 729826 - 729868
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||    
T  729826 atataacaatgtatgtccctgccaactgagctatgctcacggg 729868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 734041 - 734083
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    |||||||| |||||||||||||||||||| ||||| |||||||    
T  734041 atataacattgcatgtccctgccaactgagctatgctcacggg 734083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 853721 - 853763
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||| ||||||||||||||||| ||||| |||||||    
T  853721 atataacaatgtatgtccctgccaactgagctatgctcacggg 853763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 405
Target Start/End: Original strand, 857937 - 857979
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    |||||||| |||||||||||||||||||| ||||| |||||||    
T  857937 atataacattgcatgtccctgccaactgagctatgctcacggg 857979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 18577149 - 18577115
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    ||||||| |||||||||||||||||||||||||||    
T  18577149 taacaatacatgtccctgtcaactgagttatgctc 18577115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 37989100 - 37989134
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    ||||||||||||||||||| |||||||||||||||    
T  37989100 taacaatgcatgtccctgttaactgagttatgctc 37989134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 41793021 - 41793074
Alignment:
Q  355 gctcctgtatataacaatgcatgtccctgccaactgaactatgttcacggggacg 409  Q
    ||||||| |||||||||||||||| |||||||| ||| ||||| |||||||||||    
T  41793021 gctcctgcatataacaatgcatgt-cctgccaattgagctatgctcacggggacg 41793074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 407
Target Start/End: Complemental strand, 26657900 - 26657851
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    |||| |||||||||||||||||||| |||||||| ||||| |||| ||||    
T  26657900 cctgcatataacaatgcatgtccctaccaactgagctatgctcacaggga 26657851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 396
Target Start/End: Complemental strand, 36593237 - 36593200
Alignment:
Q  359 ctgtatataacaatgcatgtccctgccaactgaactat 396  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  36593237 ctgtatataacaatgcatgtccctaccaactgagctat 36593200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 20784701 - 20784741
Alignment:
Q  357 tcctgtatataacaatgcatgtccctgccaactgaactatg 397  Q
    ||||| |||||| ||||||||| ||||||||||||||||||    
T  20784701 tcctgcatataataatgcatgttcctgccaactgaactatg 20784741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 34084 - 34134
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  34084 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggggac 34134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 49039496 - 49039546
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  49039496 cctgcatataacaatgcatgtccctgccaactgagctatgctcacggggac 49039546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 15185122 - 15185072
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||| ||||||||||| |||||||| ||||||||||    
T  15185122 cctgcatataacaatgcatatccctgccaaccgaactatgctcacggggac 15185072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 15853866 - 15853820
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  15853866 cctgtatataacaatgcatgttcctgccaactgaattatgctcacgg 15853820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 17431413 - 17431379
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    |||||||||||||||||||||||||||||||||||    
T  17431413 taacaatgcatgtccctgtcaactgagttatgctc 17431379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 20166360 - 20166310
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| ||| | ||||||||||    
T  20166360 cctgcatataacaatgcatgtccctgccaactgagctacgctcacggggac 20166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 38657584 - 38657534
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||||||| | ||| ||||||||||    
T  38657584 cctgcatataacaatgcatgtccctgccaactgagccatgctcacggggac 38657534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 41492549 - 41492599
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||| |||||||||||||||||||||| ||||| ||||||||||    
T  41492549 cctgcatataataatgcatgtccctgccaactgagctatgctcacggggac 41492599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 402
Target Start/End: Original strand, 53180401 - 53180447
Alignment:
Q  356 ctcctgtatataacaatgcatgtccctgccaactgaactatgttcac 402  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||    
T  53180401 ctcctgtatataacaatgcatgtccctgtcaactaagctatgttcac 53180447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 408
Target Start/End: Original strand, 12585615 - 12585660
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||    
T  12585615 atataacaatgcatgtccctgccaactgagttatgtttacggggac 12585660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 402
Target Start/End: Complemental strand, 20610783 - 20610739
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcac 402  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||    
T  20610783 cctgcatataacaatgcatgtccctgccaactgagctatgctcac 20610739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 36008319 - 36008267
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggacg 409  Q
    |||| |||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  36008319 cctgcatataacaatgcattgtccctgccaactgagctatgctcacggggacg 36008267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 412
Target Start/End: Complemental strand, 2565305 - 2565250
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggacgttt 412  Q
    |||| |||||||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  2565305 cctgcatataacaatgcattgtccctgtcaactgagctatgctcacggggacgttt 2565250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 406
Target Start/End: Complemental strand, 9062215 - 9062172
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgggg 406  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||    
T  9062215 atataataatgcatgtccctgccaactaaactatgctcacgggg 9062172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 40150517 - 40150466
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    ||||||||||| ||||||| || |||||||||||||||||| ||||||||||    
T  40150517 cctgtatataataatgcattgttcctgccaactgaactatgctcacggggac 40150466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 48512243 - 48512192
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||||||||||| ||||||||||||||| ||||| ||||||||||    
T  48512243 cctgcatataacaatgcattgtccctgccaactgagctatgctcacggggac 48512192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 48968261 - 48968312
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  48968261 cctgcatataataatgcattgtccctgccaactgaactatgctcacggggac 48968312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 402
Target Start/End: Complemental strand, 53621243 - 53621200
Alignment:
Q  359 ctgtatataacaatgcatgtccctgccaactgaactatgttcac 402  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||    
T  53621243 ctgtatataacaatgcatgtccctgtcaactgaattatgctcac 53621200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 56919 - 56953
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    |||||||||||||||||| ||||||||||||||||    
T  56919 taacaatgcatgtccctgccaactgagttatgctc 56953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 49743406 - 49743356
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| |||||| ||||||| |||||||||||||||||||| || |||||||    
T  49743406 cctgcatataataatgcatatccctgccaactgaactatgctcgcggggac 49743356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 358
Target Start/End: Complemental strand, 53621236 - 53621202
Alignment:
Q  324 taacaatgcatgtccctgtcaactgagttatgctc 358  Q
    |||||||||||||||||||||||||| ||||||||    
T  53621236 taacaatgcatgtccctgtcaactgaattatgctc 53621202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 54854230 - 54854280
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  54854230 cctgcatataattatgcatgtccctgccaactgagctatgctcacggggac 54854280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 39449439 - 39449394
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||||| ||||||||||||||||| ||||  |||||||||||||||    
T  39449439 atataataatgcatgtccctgccagctgagttatgttcacggggac 39449394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 391
Target Start/End: Complemental strand, 42432052 - 42432019
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactga 391  Q
    |||| |||||||||||||||||||||||||||||    
T  42432052 cctgcatataacaatgcatgtccctgccaactga 42432019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 391
Target Start/End: Original strand, 56916 - 56944
Alignment:
Q  363 atataacaatgcatgtccctgccaactga 391  Q
    |||||||||||||||||||||||||||||    
T  56916 atataacaatgcatgtccctgccaactga 56944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 12820456 - 12820508
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttcacggggacg 409  Q
    |||| |||||||||||||| ||| ||||||||||| ||||| |||||||||||    
T  12820456 cctgcatataacaatgcattgtctctgccaactgagctatgctcacggggacg 12820508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 31480315 - 31480271
Alignment:
Q  358 cctgtatataacaatgcat-gtccctgccaactgaactatgttca 401  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||    
T  31480315 cctgcatataacaatgcattgtccctgccaactgagctatgttca 31480271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 13294435 - 13294485
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| |||||    
T  13294435 cctgcatataacaatgcatgtccctgccaattgaactatgttcacagggac 13294485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 36277758 - 36277805
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacggggacgt 410  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  36277758 atataacaatgcatgtcactgccaactgagctatgctcacggggacgt 36277805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 392
Target Start/End: Complemental strand, 34376588 - 34376552
Alignment:
Q  356 ctcctgtatataacaatgcatgtccctgccaactgaa 392  Q
    |||||| ||||||||||||||||||||||||||||||    
T  34376588 ctcctgcatataacaatgcatgtccctgccaactgaa 34376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 405
Target Start/End: Original strand, 9419031 - 9419078
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||| ||||||||||||| |||||| |||||| ||||||||    
T  9419031 cctgtatataataatgcatgtccctaccaactaaactatattcacggg 9419078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 408
Target Start/End: Complemental strand, 22355120 - 22355077
Alignment:
Q  365 ataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||||||||||||||| |||||||||| ||||| ||||||||||    
T  22355120 ataacaatgcatgtccttgccaactgagctatgctcacggggac 22355077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 405
Target Start/End: Original strand, 39334932 - 39334979
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||| ||||||||||||||||||||||  |||| |||||||    
T  39334932 cctgtatataataatgcatgtccctgccaactgagttatgctcacggg 39334979  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 1244613 - 1244563
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggggac 408  Q
    |||| ||||| ||||| ||||||||||||||||||||||| ||||| ||||    
T  1244613 cctgcatatagcaatgtatgtccctgccaactgaactatgctcacgaggac 1244563  T

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Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 405
Target Start/End: Original strand, 35352474 - 35352508
Alignment:
Q  371 atgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||||||||||||||||||| |||||||||||||    
T  35352474 atgcatgtccctgccaactgagctatgttcacggg 35352508  T

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Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 35694842 - 35694876
Alignment:
Q  370 aatgcatgtccctgccaactgaactatgttcacgg 404  Q
    ||||||||||||||||||||||| |||||||||||    
T  35694842 aatgcatgtccctgccaactgaattatgttcacgg 35694876  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 362 - 404
Target Start/End: Complemental strand, 42211560 - 42211518
Alignment:
Q  362 tatataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    |||||||||||||||||| |||||||||||| ||| |||||||    
T  42211560 tatataacaatgcatgtcactgccaactgaattatattcacgg 42211518  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 411
Target Start/End: Original strand, 2145775 - 2145811
Alignment:
Q  375 atgtccctgccaactgaactatgttcacggggacgtt 411  Q
    |||||||| |||||||||||| |||||||||||||||    
T  2145775 atgtccctaccaactgaactaagttcacggggacgtt 2145811  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 6496478 - 6496434
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatgttcacgggga 407  Q
    |||||||||||||||||||| |||||||| ||||| | |||||||    
T  6496478 atataacaatgcatgtcccttccaactgagctatgctaacgggga 6496434  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 405
Target Start/End: Complemental strand, 32944107 - 32944059
Alignment:
Q  357 tcctgtatataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    ||||| |||||| ||||||||||| |||||||||| ||||||| |||||    
T  32944107 tcctgcatataataatgcatgtccatgccaactgagctatgtttacggg 32944059  T

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Target: scaffold0712 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 4564 - 4518
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  4564 cctgcatataacaatgcatgtccctgccaactgagctatgctcacgg 4518  T

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Target: scaffold0709 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 4584 - 4538
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacgg 404  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  4584 cctgcatataacaatgcatgtccctgccaactgagctatgctcacgg 4538  T

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Target: scaffold0118 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 405
Target Start/End: Original strand, 37379 - 37426
Alignment:
Q  358 cctgtatataacaatgcatgtccctgccaactgaactatgttcacggg 405  Q
    |||||||| |||||||||||||||| |||||||| ||||| |||||||    
T  37379 cctgtataaaacaatgcatgtccctaccaactgagctatgctcacggg 37426  T

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Target: scaffold0247 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 397
Target Start/End: Complemental strand, 20762 - 20728
Alignment:
Q  363 atataacaatgcatgtccctgccaactgaactatg 397  Q
    ||||||||||| |||||||||||||||||||||||    
T  20762 atataacaatgtatgtccctgccaactgaactatg 20728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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