View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16218_low_10 (Length: 403)
Name: NF16218_low_10
Description: NF16218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16218_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 21144810 - 21144596
Alignment:
| Q |
20 |
agattttgattctagccacatccaatatcctccttaaaattgtatcctcatcaaaatccaagaactcaccaaattggtctccaatctgcttgaaagcctc |
119 |
Q |
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| T |
21144810 |
agattttgattctagccacatccaatatcctccttaaaattgtatcctcatcaaaatccaagaactcaccaaattggtctccaatctgcttgaaagcctc |
21144711 |
T |
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| Q |
120 |
ttcatcccagacatgaactggtaaacttaggattttaatccaaacagttattttgctggccactaagcttggattccattccttcatctccctaaaatga |
219 |
Q |
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| T |
21144710 |
ttcatcccagacatgaactggtaaacttaggattttaatccaaacagttcttttgctggccactaagcttggattccattccttcatctccctaaaatga |
21144611 |
T |
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| Q |
220 |
gaatcccaccaaaat |
234 |
Q |
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| T |
21144610 |
gaatcccaccaaaat |
21144596 |
T |
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