View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16218_low_9 (Length: 405)
Name: NF16218_low_9
Description: NF16218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16218_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 52 - 388
Target Start/End: Complemental strand, 23986665 - 23986329
Alignment:
| Q |
52 |
gtaaccctcataaaagacaacggcacgagttgtggaattgtcgaagagtcctactggttcaccaacaacataaggtgatgcagccatgtagtatgaacct |
151 |
Q |
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| T |
23986665 |
gtaaccctcgtaaaagacgacggcacgagttgtggaattgtcgaagagtcctactggttcaccaacaacataaggtgatgcagccatgtagtatgaacct |
23986566 |
T |
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| Q |
152 |
tttggttggtctgctgtgaaaagtatatcagcgctttggcctgccgcgatgacaattatatcggtagtatagggctcggtgtatgcggcatccatggcta |
251 |
Q |
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| T |
23986565 |
tttggttggtctgctgtgaaaagtatatcagcgctttggcctgccgcgatgacgattatatcggtggtatagggctcggtgtatgcggcatccatggcta |
23986466 |
T |
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| Q |
252 |
cgactgtgaatttgtgatcggcaatcttgaagaaaagattgttagcgagtgcagcgttgaccattcggaacaaataggtctttccttgcttcactttcag |
351 |
Q |
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| T |
23986465 |
caactgtgaatttgtgatcggcaatcttgaagaaaagattgttagcgagtgcagcgttgaccattcggaacaaataggtctttccttgcttcactttcag |
23986366 |
T |
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| Q |
352 |
cttatacatctctgaaatatataagtcaaattatata |
388 |
Q |
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| T |
23986365 |
cttatacatctctgaaatatataagtcaaattatata |
23986329 |
T |
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