View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1621_high_18 (Length: 353)
Name: NF1621_high_18
Description: NF1621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1621_high_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 36 - 353
Target Start/End: Complemental strand, 25524017 - 25523700
Alignment:
| Q |
36 |
cactggaacagtgttttctatctcatgatgatgattgaatttcttcggtaatcacttacctattttccatgtcaaaaataacactcctaaaacatatcat |
135 |
Q |
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| T |
25524017 |
cactggaacagtgttttctatctcatgatgatgattgaatttcttcggtaatcacttacctattttccatgtcaaaaagaacactcctaaaacatatcaa |
25523918 |
T |
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| Q |
136 |
catatttttatgaaataaatcattcagtacaaacgataacacaattggttacattcatagttcatgtgatgttgtcagttgtcacaaagtacaagaaaaa |
235 |
Q |
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| T |
25523917 |
cttatttttatgaaataaatcattcagtacaaacgataacacaattggttacattcatagttcatgtgatgttgtcagttgtcacaaagtacaagaaaaa |
25523818 |
T |
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| Q |
236 |
agagagtattgtttctcaatttttctctaaatttttccttcctctcttcaaagcactcttattttctgcctccaaactcaaaaaagagatgtagctagct |
335 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25523817 |
agagagtattgtttctgaatttttctctaaatttttccttcctctcttcaaagcactcttattttctgcctccaaactcaaaaaagagatgtagctagct |
25523718 |
T |
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| Q |
336 |
accaccgcaaccgattgc |
353 |
Q |
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| T |
25523717 |
accaccgcaaccgattgc |
25523700 |
T |
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