View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1621_low_19 (Length: 319)
Name: NF1621_low_19
Description: NF1621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1621_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 33074003 - 33074300
Alignment:
| Q |
1 |
aatgatacaaaattcgtcgtagttgttattttaaagacatattcaaaggtaaaatacgactacaccaaattggaaagatgagataatttaattcacaagg |
100 |
Q |
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| T |
33074003 |
aatgatacaaaattcgtcgtagttgttattttaaagacatattcaaaggtaaaatacgactacaccaaattggaaagatgagataatttaattcacaagg |
33074102 |
T |
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| Q |
101 |
caagcatcatatgcgtaccctacacctttgaattttgataatataatgacatatacaccacaccttaggtattttctacaacaccatttggttgtttttg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
33074103 |
caagcatcatatgcgtaccctacacctttgaattttgataatataatgacata-----cacaccttaggtattttctacaacaccatttggttgtttttg |
33074197 |
T |
|
| Q |
201 |
agttctttttatcctaatgcttatatatggaaatggaaaatacatcaccgattgacaaaatgtgaaaggcaagaccataaggtttatctagacttgtaca |
300 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33074198 |
agttc-ttttatcctaatgcttatatatggaaatggaaaatacatcaccgattgacaaaatgtgaaaggcaagaccataaggtttatctagacttgtaca |
33074296 |
T |
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