View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1621_low_22 (Length: 303)
Name: NF1621_low_22
Description: NF1621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1621_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 30889267 - 30888973
Alignment:
| Q |
1 |
atgttttactctcatctgtgttccacacgcagtgtaatatgtgacaattttcactagatatagttcttaatcttatgttttggatataagaagtttcaat |
100 |
Q |
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| T |
30889267 |
atgttttactctcatttgtgttccacacgcagtgtaatatgttacaattttcactagatatagttcttaatcttatgttttggatataagaagtttcaat |
30889168 |
T |
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| Q |
101 |
tttcactagatatagttctcatttgtgttctatagtgtattccgtggcatagaatattgggaaaagatgaactagaagctcttatttcatgtgaaaagat |
200 |
Q |
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| T |
30889167 |
tttcactagatatagttctcatttgtgttctatagtgtattccgtggcatagaagattgggaaaagatggactagaagctcttatttcatgtgaaaagat |
30889068 |
T |
|
| Q |
201 |
---tgaggctcggtttggtttggagatattagatttgtgaagttcgtaattgaaggtaaaaggagttgaagaaagataattcatatgttgttcat |
292 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30889067 |
tgatgaggctcggtttggtttggagatattagatttgcgaagttcgtaattgaaggtaaaaggagttgaagaaagataattcatatgttgttcat |
30888973 |
T |
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