View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1621_low_26 (Length: 276)
Name: NF1621_low_26
Description: NF1621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1621_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 19 - 264
Target Start/End: Complemental strand, 30071124 - 30070879
Alignment:
| Q |
19 |
acaattagaactttgaaacgtgtcgctcaaatatgtaactcgttttctcagctgaaacgagttaaatcggaacaactcactctgttctaaaacctaattc |
118 |
Q |
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| T |
30071124 |
acaattagaacttagaaacgtgtcgctcaaatatgtaactcgttttctcagctgaaacgagttaaatcggaacaactcactctgttctaaaacctaattc |
30071025 |
T |
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| Q |
119 |
accatgaattccttactcacttcttcattacgtgctgctttcccacacacttcaacaacaactacaactaaatctttcaatcttcttcacaaacaacaac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30071024 |
accatgaattccttactcacttcttcattacgtgctgctttcccacacacttcaacaacaactacaactaaatctttcaatcttcttcacaaacaacaac |
30070925 |
T |
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| Q |
219 |
gccattttctcttcatctcttctaaattcaaatcaccccaattcat |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30070924 |
gccattttctcttcatctcttctaaattcaaatcaccccaattcat |
30070879 |
T |
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