View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16220_low_1 (Length: 414)

Name: NF16220_low_1
Description: NF16220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16220_low_1
NF16220_low_1
[»] chr7 (59 HSPs)
chr7 (51-179)||(12108406-12108538)
chr7 (182-274)||(48123572-48123664)
chr7 (191-274)||(43557435-43557519)
chr7 (182-297)||(19266405-19266520)
chr7 (182-365)||(23419674-23419854)
chr7 (191-315)||(42798632-42798756)
chr7 (206-270)||(11741774-11741838)
chr7 (191-284)||(2541097-2541192)
chr7 (183-270)||(13805058-13805145)
chr7 (191-284)||(14732900-14732994)
chr7 (183-273)||(28362234-28362324)
chr7 (191-284)||(42805487-42805581)
chr7 (191-270)||(10693163-10693243)
chr7 (193-272)||(19426979-19427059)
chr7 (191-270)||(21172099-21172179)
chr7 (191-274)||(27629597-27629681)
chr7 (191-270)||(32758224-32758304)
chr7 (191-313)||(46354157-46354281)
chr7 (191-270)||(47077945-47078025)
chr7 (195-332)||(11617618-11617756)
chr7 (188-274)||(7644917-7645003)
chr7 (196-274)||(14099094-14099172)
chr7 (196-274)||(14409111-14409189)
chr7 (193-307)||(16341244-16341358)
chr7 (191-315)||(22699016-22699142)
chr7 (203-297)||(33871975-33872068)
chr7 (209-270)||(42391190-42391251)
chr7 (191-271)||(42495926-42496007)
chr7 (206-313)||(47716438-47716546)
chr7 (188-271)||(19265776-19265859)
chr7 (189-274)||(12473265-12473351)
chr7 (190-313)||(29907380-29907505)
chr7 (189-271)||(44123712-44123794)
chr7 (188-233)||(3469308-3469353)
chr7 (191-271)||(18326997-18327078)
chr7 (191-274)||(35334904-35334986)
chr7 (190-315)||(42101932-42102057)
chr7 (191-270)||(48735212-48735293)
chr7 (191-274)||(5180245-5180329)
chr7 (191-271)||(32233225-32233305)
chr7 (191-272)||(7794596-7794678)
chr7 (204-269)||(7193062-7193127)
chr7 (191-271)||(40463840-40463921)
chr7 (183-248)||(6736846-6736911)
chr7 (194-271)||(39123857-39123934)
chr7 (203-338)||(42476849-42476982)
chr7 (193-274)||(1423998-1424080)
chr7 (207-272)||(28078223-28078286)
chr7 (191-270)||(2663025-2663103)
chr7 (191-271)||(34626298-34626379)
chr7 (183-223)||(43852006-43852046)
chr7 (236-338)||(7879647-7879749)
chr7 (192-233)||(29140489-29140531)
chr7 (218-272)||(38262286-38262340)
chr7 (239-284)||(1408469-1408514)
chr7 (198-271)||(22065559-22065632)
chr7 (183-256)||(24634164-24634237)
chr7 (190-219)||(36267902-36267931)
chr7 (225-281)||(35203437-35203493)
[»] chr2 (51 HSPs)
chr2 (191-338)||(11514399-11514546)
chr2 (191-338)||(14530281-14530431)
chr2 (191-338)||(10543661-10543811)
chr2 (191-271)||(12024009-12024090)
chr2 (191-270)||(23397729-23397809)
chr2 (203-332)||(7214510-7214641)
chr2 (191-297)||(8455381-8455488)
chr2 (203-302)||(24200685-24200784)
chr2 (188-274)||(99353-99437)
chr2 (188-272)||(5450246-5450330)
chr2 (191-270)||(21779351-21779431)
chr2 (188-274)||(4516439-4516525)
chr2 (188-257)||(35017778-35017848)
chr2 (182-284)||(44521451-44521553)
chr2 (191-267)||(27573584-27573661)
chr2 (192-284)||(21377151-21377243)
chr2 (199-274)||(29419977-29420052)
chr2 (203-297)||(17667978-17668072)
chr2 (191-272)||(25079808-25079890)
chr2 (191-270)||(9671143-9671224)
chr2 (183-255)||(17380343-17380415)
chr2 (191-274)||(17705458-17705542)
chr2 (191-282)||(19977794-19977886)
chr2 (200-284)||(33795258-33795342)
chr2 (205-272)||(5841006-5841073)
chr2 (191-257)||(22371020-22371087)
chr2 (203-274)||(40416959-40417030)
chr2 (203-297)||(17623540-17623634)
chr2 (191-272)||(17896222-17896304)
chr2 (191-256)||(25249843-25249909)
chr2 (183-229)||(35010503-35010549)
chr2 (205-271)||(44604832-44604898)
chr2 (212-257)||(25641487-25641532)
chr2 (203-272)||(39914396-39914465)
chr2 (188-274)||(23145786-23145871)
chr2 (188-274)||(23557576-23557661)
chr2 (218-271)||(14444720-14444773)
chr2 (205-274)||(31158529-31158598)
chr2 (183-284)||(15296485-15296588)
chr2 (192-271)||(24860077-24860157)
chr2 (183-257)||(31821446-31821517)
chr2 (191-338)||(32781312-32781459)
chr2 (190-233)||(44643485-44643528)
chr2 (218-272)||(10546153-10546207)
chr2 (191-232)||(14544026-14544068)
chr2 (216-274)||(19614981-19615039)
chr2 (203-272)||(26684711-26684781)
chr2 (193-230)||(27466262-27466300)
chr2 (191-227)||(39189556-39189593)
chr2 (247-338)||(40762258-40762349)
chr2 (204-256)||(45235924-45235976)
[»] chr1 (66 HSPs)
chr1 (192-284)||(18724623-18724715)
chr1 (183-313)||(17470395-17470525)
chr1 (188-284)||(22327083-22327179)
chr1 (191-313)||(20004140-20004264)
chr1 (190-313)||(2435836-2435959)
chr1 (191-338)||(18944629-18944779)
chr1 (191-271)||(22930158-22930239)
chr1 (191-282)||(14617024-14617116)
chr1 (191-313)||(30395776-30395900)
chr1 (191-270)||(34725188-34725268)
chr1 (188-272)||(50811923-50812007)
chr1 (203-302)||(27201646-27201745)
chr1 (183-257)||(6983914-6983988)
chr1 (191-271)||(32632647-32632728)
chr1 (203-338)||(23768344-23768479)
chr1 (191-297)||(8197029-8197136)
chr1 (192-255)||(20036208-20036271)
chr1 (190-272)||(2435983-2436065)
chr1 (191-284)||(46991790-46991884)
chr1 (191-282)||(10668206-10668303)
chr1 (191-338)||(46247977-46248125)
chr1 (188-273)||(50760315-50760400)
chr1 (181-273)||(19701547-19701639)
chr1 (200-284)||(35117846-35117930)
chr1 (193-256)||(47214499-47214563)
chr1 (204-271)||(25468354-25468421)
chr1 (203-297)||(41319871-41319965)
chr1 (183-297)||(44485174-44485288)
chr1 (183-257)||(52910196-52910270)
chr1 (203-272)||(6925099-6925168)
chr1 (189-253)||(10378834-10378898)
chr1 (191-283)||(25290149-25290244)
chr1 (192-271)||(33222971-33223051)
chr1 (191-270)||(38478372-38478452)
chr1 (192-271)||(11596501-11596580)
chr1 (191-245)||(19932869-19932924)
chr1 (189-332)||(35019215-35019357)
chr1 (188-321)||(27136692-27136826)
chr1 (191-256)||(34714609-34714675)
chr1 (191-271)||(45402081-45402161)
chr1 (191-270)||(12126927-12127007)
chr1 (188-284)||(15511229-15511325)
chr1 (203-271)||(27474280-27474348)
chr1 (191-270)||(45812627-45812707)
chr1 (191-255)||(9939446-9939512)
chr1 (191-248)||(40424728-40424786)
chr1 (191-243)||(18742080-18742133)
chr1 (188-257)||(23371108-23371177)
chr1 (183-228)||(43207468-43207513)
chr1 (203-274)||(4430114-4430185)
chr1 (203-270)||(19414438-19414505)
chr1 (188-255)||(25554829-25554896)
chr1 (186-229)||(28894664-28894707)
chr1 (188-223)||(31442516-31442551)
chr1 (183-229)||(34679352-34679398)
chr1 (220-302)||(35005139-35005221)
chr1 (183-232)||(46859050-46859099)
chr1 (205-257)||(22151505-22151557)
chr1 (188-232)||(49546037-49546081)
chr1 (183-233)||(6358113-6358163)
chr1 (214-256)||(43768168-43768210)
chr1 (214-271)||(31272465-31272522)
chr1 (192-273)||(39215048-39215129)
chr1 (215-271)||(19974165-19974221)
chr1 (191-274)||(24564330-24564414)
chr1 (218-270)||(35253277-35253329)
[»] chr4 (61 HSPs)
chr4 (188-307)||(487190-487309)
chr4 (191-274)||(16408691-16408775)
chr4 (191-270)||(20224947-20225027)
chr4 (191-270)||(48598915-48598995)
chr4 (198-284)||(35567141-35567227)
chr4 (191-271)||(5648222-5648303)
chr4 (191-271)||(6430716-6430797)
chr4 (191-270)||(5306755-5306835)
chr4 (182-297)||(19027803-19027918)
chr4 (191-272)||(21646927-21647009)
chr4 (183-313)||(36589700-36589829)
chr4 (193-271)||(42164239-42164317)
chr4 (190-272)||(54640429-54640511)
chr4 (183-271)||(49938681-49938770)
chr4 (191-313)||(16911525-16911649)
chr4 (200-312)||(39029111-39029223)
chr4 (203-338)||(40915805-40915939)
chr4 (191-270)||(47528620-47528700)
chr4 (183-274)||(23580296-23580387)
chr4 (191-313)||(30639343-30639464)
chr4 (183-313)||(54175020-54175149)
chr4 (191-274)||(54966985-54967068)
chr4 (193-270)||(11054238-11054316)
chr4 (191-272)||(14590800-14590882)
chr4 (191-284)||(17315377-17315470)
chr4 (183-297)||(17043459-17043570)
chr4 (193-272)||(54730214-54730294)
chr4 (188-267)||(12257688-12257767)
chr4 (203-274)||(44363220-44363291)
chr4 (183-254)||(50856344-50856415)
chr4 (191-338)||(10660367-10660516)
chr4 (191-338)||(10874512-10874661)
chr4 (192-302)||(25343152-25343262)
chr4 (191-272)||(30352681-30352763)
chr4 (208-270)||(39077886-39077948)
chr4 (183-284)||(51420529-51420631)
chr4 (203-284)||(43035224-43035305)
chr4 (191-246)||(23501756-23501812)
chr4 (213-273)||(25463108-25463168)
chr4 (196-272)||(30690273-30690349)
chr4 (183-257)||(32629373-32629444)
chr4 (191-274)||(37494814-37494898)
chr4 (188-256)||(47441636-47441704)
chr4 (183-313)||(20908686-20908817)
chr4 (183-269)||(30496413-30496500)
chr4 (210-272)||(7385566-7385628)
chr4 (191-297)||(13256466-13256569)
chr4 (190-272)||(30581557-30581639)
chr4 (205-271)||(32478876-32478942)
chr4 (191-259)||(5313097-5313166)
chr4 (215-307)||(7038041-7038132)
chr4 (203-338)||(14983810-14983945)
chr4 (210-270)||(41018885-41018945)
chr4 (244-338)||(20639682-20639777)
chr4 (189-271)||(49938529-49938612)
chr4 (193-266)||(8473716-8473790)
chr4 (205-270)||(9832403-9832468)
chr4 (189-270)||(41549344-41549425)
chr4 (203-297)||(47443929-47444027)
chr4 (183-246)||(3580952-3581015)
chr4 (203-255)||(44357196-44357248)
[»] chr3 (53 HSPs)
chr3 (190-313)||(34420693-34420816)
chr3 (188-366)||(25944452-25944628)
chr3 (188-366)||(53996564-53996740)
chr3 (191-338)||(8247711-8247861)
chr3 (191-297)||(26573113-26573219)
chr3 (191-338)||(46421059-46421209)
chr3 (191-338)||(40272836-40272984)
chr3 (183-272)||(45620919-45621008)
chr3 (191-284)||(13730682-13730776)
chr3 (191-271)||(10870042-10870123)
chr3 (206-369)||(13628786-13628948)
chr3 (199-282)||(30928227-30928310)
chr3 (183-274)||(35417894-35417985)
chr3 (191-284)||(9607188-9607282)
chr3 (191-338)||(29366744-29366894)
chr3 (191-271)||(22609752-22609832)
chr3 (191-338)||(12914059-12914207)
chr3 (195-271)||(26869696-26869773)
chr3 (191-267)||(52926305-52926382)
chr3 (193-274)||(53062026-53062107)
chr3 (191-270)||(1217075-1217155)
chr3 (191-270)||(7696977-7697057)
chr3 (213-284)||(516417-516488)
chr3 (206-271)||(5173811-5173876)
chr3 (191-314)||(4495713-4495836)
chr3 (191-270)||(22123007-22123087)
chr3 (204-270)||(39203515-39203581)
chr3 (188-297)||(45948903-45949015)
chr3 (191-271)||(6411912-6411993)
chr3 (191-332)||(16735426-16735567)
chr3 (199-282)||(19730996-19731079)
chr3 (216-271)||(33926094-33926149)
chr3 (191-286)||(43956536-43956631)
chr3 (208-274)||(7942993-7943059)
chr3 (183-284)||(44403634-44403735)
chr3 (216-297)||(54032624-54032705)
chr3 (236-338)||(10795447-10795551)
chr3 (183-333)||(1121253-1121404)
chr3 (183-297)||(29106527-29106641)
chr3 (237-313)||(14986989-14987066)
chr3 (181-233)||(25517302-25517355)
chr3 (212-284)||(12525414-12525486)
chr3 (191-231)||(55400984-55401024)
chr3 (238-338)||(43114892-43114994)
chr3 (216-337)||(45139502-45139624)
chr3 (188-230)||(21330379-21330421)
chr3 (207-281)||(39211992-39212066)
chr3 (193-230)||(829574-829611)
chr3 (196-233)||(31542404-31542441)
chr3 (220-313)||(54374395-54374488)
chr3 (202-282)||(19751575-19751655)
chr3 (193-225)||(28904931-28904963)
chr3 (237-313)||(55401208-55401284)
[»] chr8 (39 HSPs)
chr8 (191-338)||(39461018-39461168)
chr8 (183-313)||(42083748-42083878)
chr8 (183-312)||(14018019-14018148)
chr8 (183-284)||(44781584-44781685)
chr8 (191-313)||(7136577-7136701)
chr8 (191-270)||(12670340-12670420)
chr8 (191-270)||(20869588-20869668)
chr8 (191-270)||(30454187-30454267)
chr8 (191-297)||(28817691-28817798)
chr8 (191-297)||(36720759-36720866)
chr8 (192-281)||(17823540-17823630)
chr8 (190-271)||(28407378-28407460)
chr8 (191-338)||(35261642-35261790)
chr8 (192-271)||(18164850-18164930)
chr8 (188-272)||(30962863-30962947)
chr8 (192-313)||(6760786-6760909)
chr8 (191-272)||(2626482-2626564)
chr8 (191-272)||(20284163-20284245)
chr8 (191-272)||(21070792-21070874)
chr8 (198-315)||(22598128-22598244)
chr8 (191-338)||(29521709-29521857)
chr8 (191-338)||(44530112-44530260)
chr8 (187-274)||(8484026-8484113)
chr8 (195-271)||(13160669-13160746)
chr8 (191-254)||(24245414-24245478)
chr8 (191-313)||(44742568-44742690)
chr8 (203-272)||(26954108-26954177)
chr8 (203-271)||(45071241-45071309)
chr8 (203-297)||(8897829-8897923)
chr8 (191-272)||(25250485-25250567)
chr8 (204-272)||(24365150-24365218)
chr8 (192-272)||(26457680-26457760)
chr8 (206-270)||(35105902-35105966)
chr8 (209-271)||(31457155-31457217)
chr8 (210-271)||(11748282-11748343)
chr8 (202-284)||(11001027-11001110)
chr8 (213-271)||(23000309-23000365)
chr8 (203-272)||(12625865-12625934)
chr8 (236-272)||(5135379-5135415)
[»] chr5 (37 HSPs)
chr5 (191-338)||(38879544-38879694)
chr5 (191-272)||(23974744-23974825)
chr5 (191-313)||(4619154-4619278)
chr5 (191-272)||(43334165-43334247)
chr5 (191-271)||(41014282-41014363)
chr5 (191-270)||(35710276-35710356)
chr5 (191-270)||(37024646-37024726)
chr5 (188-255)||(10634253-10634320)
chr5 (191-297)||(24448853-24448960)
chr5 (203-313)||(27328728-27328839)
chr5 (183-274)||(39301079-39301170)
chr5 (191-272)||(1565394-1565476)
chr5 (188-284)||(22025507-22025600)
chr5 (183-253)||(39079875-39079945)
chr5 (191-270)||(8170074-8170154)
chr5 (183-313)||(208977-209106)
chr5 (204-302)||(22187262-22187360)
chr5 (200-313)||(28516483-28516596)
chr5 (214-270)||(32703411-32703467)
chr5 (188-297)||(19143008-19143116)
chr5 (247-367)||(29334415-29334533)
chr5 (232-313)||(13801817-13801899)
chr5 (188-274)||(34074650-34074735)
chr5 (205-270)||(22861758-22861823)
chr5 (188-271)||(22907955-22908035)
chr5 (198-255)||(24313682-24313739)
chr5 (198-255)||(24356019-24356076)
chr5 (193-246)||(31694224-31694277)
chr5 (211-271)||(1850624-1850684)
chr5 (203-255)||(22600430-22600482)
chr5 (189-233)||(43574559-43574603)
chr5 (203-258)||(17419890-17419945)
chr5 (191-271)||(2838741-2838823)
chr5 (207-338)||(12006352-12006485)
chr5 (210-255)||(1405170-1405215)
chr5 (246-313)||(20135623-20135691)
chr5 (205-233)||(28208236-28208264)
[»] chr6 (32 HSPs)
chr6 (192-338)||(12221939-12222088)
chr6 (191-276)||(14975166-14975252)
chr6 (191-284)||(13905057-13905150)
chr6 (191-270)||(1346927-1347007)
chr6 (191-270)||(1354847-1354927)
chr6 (191-284)||(8409206-8409300)
chr6 (210-338)||(29355879-29356009)
chr6 (202-271)||(9161098-9161167)
chr6 (204-282)||(2166492-2166570)
chr6 (204-282)||(2178125-2178203)
chr6 (191-256)||(3815183-3815249)
chr6 (183-307)||(7947427-7947551)
chr6 (183-274)||(12889382-12889473)
chr6 (188-313)||(11849016-11849139)
chr6 (203-272)||(14553488-14553556)
chr6 (191-274)||(15866125-15866209)
chr6 (191-301)||(20400630-20400741)
chr6 (203-255)||(2755531-2755583)
chr6 (193-272)||(24734598-24734678)
chr6 (203-274)||(6024209-6024280)
chr6 (191-254)||(33922936-33923000)
chr6 (191-297)||(1941818-1941925)
chr6 (205-272)||(12063445-12063512)
chr6 (219-274)||(17432332-17432387)
chr6 (205-270)||(28007604-28007671)
chr6 (205-271)||(22967149-22967215)
chr6 (205-271)||(23821178-23821244)
chr6 (204-274)||(32728244-32728314)
chr6 (203-256)||(8417448-8417501)
chr6 (188-229)||(15290434-15290475)
chr6 (213-270)||(23240914-23240971)
chr6 (203-272)||(27855528-27855597)
[»] scaffold0187 (4 HSPs)
scaffold0187 (191-270)||(10140-10220)
scaffold0187 (191-270)||(20468-20548)
scaffold0187 (191-246)||(8908-8964)
scaffold0187 (191-246)||(19236-19292)
[»] scaffold0168 (1 HSPs)
scaffold0168 (191-270)||(30542-30622)
[»] scaffold0258 (1 HSPs)
scaffold0258 (191-297)||(13089-13195)
[»] scaffold0049 (1 HSPs)
scaffold0049 (191-365)||(58940-59114)
[»] scaffold1176 (1 HSPs)
scaffold1176 (203-270)||(1677-1744)
[»] scaffold0254 (1 HSPs)
scaffold0254 (204-282)||(4134-4212)
[»] scaffold0057 (3 HSPs)
scaffold0057 (191-284)||(24850-24939)
scaffold0057 (183-250)||(46995-47062)
scaffold0057 (191-272)||(46794-46876)
[»] scaffold0005 (1 HSPs)
scaffold0005 (191-272)||(226496-226578)
[»] scaffold0223 (1 HSPs)
scaffold0223 (191-270)||(11095-11174)
[»] scaffold0024 (1 HSPs)
scaffold0024 (191-255)||(83838-83903)
[»] scaffold0116 (1 HSPs)
scaffold0116 (203-271)||(8867-8935)
[»] scaffold0167 (1 HSPs)
scaffold0167 (183-274)||(23559-23646)
[»] scaffold0311 (1 HSPs)
scaffold0311 (191-274)||(10773-10857)
[»] scaffold0194 (1 HSPs)
scaffold0194 (205-257)||(24642-24694)
[»] scaffold0031 (1 HSPs)
scaffold0031 (203-271)||(43105-43173)
[»] scaffold0028 (1 HSPs)
scaffold0028 (199-247)||(32902-32950)


Alignment Details
Target: chr7 (Bit Score: 84; Significance: 9e-40; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 51 - 179
Target Start/End: Original strand, 12108406 - 12108538
Alignment:
Q  51 agtaagaagaatgaatgtacagcggttgagaatgtctgatagaaagaag----aaaaaagtatgttgcttgataacatatctccgatacgatatcaccag 146  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||||    ||||||||||||||||||||||||| |||| ||||||||||||||||    
T  12108406 agtaagaagaatgaatgtacagcagttgagattatctgatagaaagaaggaaaaaaaaagtatgttgcttgataacatttctcggatacgatatcaccag 12108505  T
Q  147 aaattcattttgagtaatcatgttcttattgtg 179  Q
    ||| |||||||||||| ||||| ||||||||||    
T  12108506 aaactcattttgagtattcatggtcttattgtg 12108538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 48123664 - 48123572
Alignment:
Q  182 tagggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||| ||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||| ||||    
T  48123664 tagggggagccttggcgcaacggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataaca 48123572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 43557435 - 43557519
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  43557435 ccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaaca 43557519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 19266405 - 19266520
Alignment:
Q  182 tagggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||  || | |||||||||| | ||||    
T  19266405 tagggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaag 19266504  T
Q  282 gctacctacagtacac 297  Q
    ||| | |||| |||||    
T  19266505 gctgcgtacaatacac 19266520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 365
Target Start/End: Complemental strand, 23419854 - 23419674
Alignment:
Q  182 tagggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||||   ||||||||| ||||||||||| ||| |||||||||||| | ||||    
T  23419854 tagggggagccttggcgcaacggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaag 23419755  T
Q  282 gctacctacagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggaggagctttaatgcatcaggctgcccttt 365  Q
     || | |||| |||||  |||||||| || ||||||||||||  ||||| || |   || |||||| |||||| |||||||||||    
T  23419754 actgcgtacaatacac-caaatggtgggaccccttcctagaccttgcgtgtgcg---ggggctttagtgcatcgggctgcccttt 23419674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 315
Target Start/End: Original strand, 42798632 - 42798756
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||| |||||||||  ||| |||||||||||||| ||||||| | ||    
T  42798632 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgta 42798731  T
Q  290 cagtacactaaaatggtgagaccctt 315  Q
    || |||||  |||||||| |||||||    
T  42798732 caatacac-caaatggtgggaccctt 42798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 11741774 - 11741838
Alignment:
Q  206 aaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaa 11741838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 2541192 - 2541097
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactg-aaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||| |||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  2541192 ccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 2541097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 13805058 - 13805145
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||| ||| ||| ||||||||    
T  13805058 agggggagccttggcgcaatggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaa 13805145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 14732994 - 14732900
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||   ||||||||||| | |||||||    
T  14732994 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggct 14732900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 28362324 - 28362234
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaac 273  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||| ||||| || ||| |||||||||||    
T  28362324 agggggagccttggcgcaacggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaac 28362234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 42805487 - 42805581
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  42805487 ccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 42805581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 10693243 - 10693163
Alignment:
Q  191 ccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  10693243 ccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10693163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 19427059 - 19426979
Alignment:
Q  193 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaa 19426979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 21172179 - 21172099
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  21172179 ccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 21172099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 27629597 - 27629681
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| ||| ||||||||||||    
T  27629597 ccttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaca 27629681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 32758224 - 32758304
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||| ||||||||    
T  32758224 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa 32758304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 313
Target Start/End: Original strand, 46354157 - 46354281
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| ||||||||||||||||||||| || ||||||  |||||||||||||||||||| | ||| |||||||||||| | ||||||| | ||    
T  46354157 ccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 46354256  T
Q  290 cagtacactaa-aatggtgagaccc 313  Q
    || ||||| || ||||||| |||||    
T  46354257 caatacaccaataatggtgggaccc 46354281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 47078025 - 47077945
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||| ||||||||    
T  47078025 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 47077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 195 - 332
Target Start/End: Complemental strand, 11617756 - 11617618
Alignment:
Q  195 ggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagt 293  Q
    |||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||| | ||| |||||||||||| | |||| || | |||| |    
T  11617756 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaat 11617657  T
Q  294 acactaaaatggtgaga-cccttcctagacactgcgtatg 332  Q
    ||||  |||||||| || |||||||| ||| |||||||||    
T  11617656 acac-caaatggtgggaccccttcctggaccctgcgtatg 11617618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 188 - 274
Target Start/End: Original strand, 7644917 - 7645003
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||  |||||| ||||||| | ||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||    
T  7644917 gagccttggcgcagtggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaca 7645003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 14099172 - 14099094
Alignment:
Q  196 gcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| | | ||||||||||||    
T  14099172 gcgctacggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaaca 14099094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 196 - 274
Target Start/End: Complemental strand, 14409189 - 14409111
Alignment:
Q  196 gcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| | | ||||||||||||    
T  14409189 gcgctacggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaaca 14409111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 16341244 - 16341358
Alignment:
Q  193 ttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacag 292  Q
    |||| ||||||||||||||||| ||||||   |||||||||  |||||||||| || |||||||| ||| |||||||||||| | ||||||||| ||||     
T  16341244 ttggagcaacggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgtacaa 16341343  T
Q  293 tacactaaaatggtg 307  Q
    ||||| |||||||||    
T  16341344 tacaccaaaatggtg 16341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 315
Target Start/End: Complemental strand, 22699142 - 22699016
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    ||||| |||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||  ||| |||||||||||| | |||| || | ||    
T  22699142 ccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgta 22699043  T
Q  290 cagtaca-ctaaaatggtgagaccctt 315  Q
    || |||| | ||||||||| |||||||    
T  22699042 caatacaccaaaaatggtgggaccctt 22699016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 33872068 - 33871975
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac 297  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||| |||| ||||||| ||||||||| | |||| |||||    
T  33872068 ggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgt-aaaaacaggataaggctgcgtacaatacac 33871975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 42391251 - 42391190
Alignment:
Q  209 gttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaa 42391190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 42496007 - 42495926
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||||||||||| ||| || ||||||    
T  42496007 ccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 42495926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 47716438 - 47716546
Alignment:
Q  206 aaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaa-aatg 304  Q
    |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||||| | ||||||| | |||| ||||| || ||||    
T  47716438 aaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatg 47716537  T
Q  305 gtgagaccc 313  Q
    ||| |||||    
T  47716538 gtgggaccc 47716546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 19265776 - 19265859
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||| |||||  || |||||||||    
T  19265776 gagcattggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaa 19265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 12473265 - 12473351
Alignment:
Q  189 agccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||| ||||| | ||| |||| |||||||    
T  12473265 agccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaaca 12473351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 313
Target Start/End: Original strand, 29907380 - 29907505
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgt--catgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacc 287  Q
    |||||| | ||||||||||||||||||  |||||||||||||||||  ||||||||||||| |||||||| ||| |||||||||| |   ||||||| |     
T  29907380 gccttgtcacaacggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcg 29907479  T
Q  288 tacagtacactaaaatggtgagaccc 313  Q
    | || ||||| ||||||||| |||||    
T  29907480 ttcaatacaccaaaatggtgggaccc 29907505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 44123794 - 44123712
Alignment:
Q  189 agccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |   |||||||||| ||||||||||| ||| |||||||||    
T  44123794 agccttggtgcaacggtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaa 44123712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 3469353 - 3469308
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtc 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3469353 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtc 3469308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 18326997 - 18327078
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| |||||||||||||||||||||||  ||||||  |||||||||||| ||||||||| ||| |||||||||    
T  18326997 ccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgtaaaaa 18327078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 35334986 - 35334904
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  | |||||||||||||||||||  ||| ||||||||||||    
T  35334986 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacag--tctcgtgtaaaaaaca 35334904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 190 - 315
Target Start/End: Complemental strand, 42102057 - 42101932
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||    |||||||||||||||||||| |||   |||||||||| | |||  || | ||    
T  42102057 gccttggcacaacggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaacactgcgta 42101958  T
Q  290 cagtacactaaaatggtgagaccctt 315  Q
    |||||| ||||| ||||| |||||||    
T  42101957 cagtactctaaagtggtgggaccctt 42101932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 48735293 - 48735212
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcc-tggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| |||||||| | ||| ||||||||    
T  48735293 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaa 48735212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 5180329 - 5180245
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||| |||||| |||||||||||||||||||||||||||||||  |||||||| | ||||||||||| ||| |||| |||||||    
T  5180329 ccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaaca 5180245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 32233305 - 32233225
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| | ||| |||||||||  ||||||||||||| ||||||||||||||||||||| | ||| |||||||||    
T  32233305 ccttggcgcaacagaaaaattgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaa 32233225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 7794678 - 7794596
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||| ||||||| |||||||||||||| ||||||||| ||||||  |||||||||||||||||||||| |||  |||||||||    
T  7794678 ccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaaa 7794596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 7193062 - 7193127
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaa 269  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| |||||| | ||| |||||||    
T  7193062 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaa 7193127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 40463840 - 40463921
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||| | |||||||  ||| |||||||||    
T  40463840 ccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaa 40463921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 6736846 - 6736911
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcct 248  Q
    |||| |||||||| | |||| ||||||||||||||||| ||||||||||||  |||||||||||||    
T  6736846 agggggagccttgacacaacagtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcct 6736911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 39123857 - 39123934
Alignment:
Q  194 tggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||| ||||||||||||||||||||||||||| | |  ||||||||||||| ||||| |  ||| |||||||||    
T  39123857 tggcgcaatggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaacggtctcttgtgtaaaaa 39123934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 338
Target Start/End: Original strand, 42476849 - 42476982
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaa 302  Q
    ||||||||||||||||||||||| |||||||  || ||||||| ||||||||||  ||| ||||  |||||||| ||||||| | |||| |||||  |||    
T  42476849 ggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgt--aaaacaaggtaaggctgcgtacaatacac-caaa 42476945  T
Q  303 tggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    ||||| || |||||||||| | |||| |||| |||||    
T  42476946 tggtgggaccccttcctaggctctgcatatgcgggag 42476982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 274
Target Start/End: Complemental strand, 1424080 - 1423998
Alignment:
Q  193 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||| |||||||||||||| ||||||||| ||||||  || ||||| ||||||||||||  | | ||||||||||||    
T  1424080 ttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtctgttgtgtaaaaaaca 1423998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 272
Target Start/End: Complemental strand, 28078286 - 28078223
Alignment:
Q  207 aagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||||||||||| ||||||  ||||||||||||| |||||||  ||| ||||||||||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag--tctcgtgtaaaaaa 28078223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 2663103 - 2663025
Alignment:
Q  191 ccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||  ||||||||||||| ||||||||| |  ||| | ||||||||||||||||||||| ||| ||||||||    
T  2663103 ccttggcgcaactagtaaagttgttgttatgtgactgga--gtcataggttcaagtcctggaaacagcctcttgtgtaaaa 2663025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 34626379 - 34626298
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||| ||||||| ||||||||||||||||||||| ||||||| |   | ||||||||||||||||||| ||  |||||||||    
T  34626379 ccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaa 34626298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 43852006 - 43852046
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtga 223  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  43852006 agggggagccttggtgcaacggtaaagttgttgtcatgtga 43852046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 7879647 - 7879749
Alignment:
Q  236 gggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaatggtgaga-cccttcctagacactgcgtatggg 334  Q
    ||||||||||||||||||||   ||| |||||||||||||| ||||||| | |||| |||||  |||||||| || |||||||  ||| ||||||||| |    
T  7879647 gggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgtacaatacac-caaatggtgggaccccttcccggaccctgcgtatgcg 7879745  T
Q  335 ggag 338  Q
    ||||    
T  7879746 ggag 7879749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 29140531 - 29140489
Alignment:
Q  192 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtc 233  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  29140531 cttggcgcaactggtaaagttgttgtcatgtaactgaaaggtc 29140489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 38262340 - 38262286
Alignment:
Q  218 atgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||| ||||||  |||||||||||||||||||||  ||| ||||||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaa 38262286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 1408469 - 1408514
Alignment:
Q  239 ttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    ||||||||||||||| ||| ||| |||||||||||||| |||||||    
T  1408469 ttcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaaggct 1408514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 22065559 - 22065632
Alignment:
Q  198 gcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||| |||||||||||||||| |||| ||||| ||| || ||||||||  |||||||| | ||| |||||||||    
T  22065559 gcaatggtaaagttgttgtcacgtgattgaaaagtcatgagttcaagttttggaaacaacctcttgtgtaaaaa 22065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 256
Target Start/End: Complemental strand, 24634237 - 24634164
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    |||| ||||||||| ||||| ||||||||  ||||| ||||||  |||||| |||||||||||  |||||||||    
T  24634237 agggggagccttggtgcaacagtaaagttcatgtcacgtgactataaggtcatgggttcaagttatggaaacag 24634164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 219
Target Start/End: Complemental strand, 36267931 - 36267902
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgtcat 219  Q
    ||||||||||||||||||||||||||||||    
T  36267931 gccttggcgcaacggtaaagttgttgtcat 36267902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 35203437 - 35203493
Alignment:
Q  225 tgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    |||||||||  ||||||||||||||||||||   ||| |||||||||||| ||||||    
T  35203437 tgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataag 35203493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 11514399 - 11514546
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||| ||||||||||||| ||| |||||||||||||  ||||||| | ||    
T  11514399 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgta 11514498  T
Q  290 cagtacactaaaatggtgagacccttcctagacactgcgtatgggggag 338  Q
    || |||||  |||||||| ||||||||| |||| ||||||||| |||||    
T  11514499 caatacac-caaatggtgggacccttcccagaccctgcgtatgcgggag 11514546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 14530281 - 14530431
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| || ||||||||| | ||||||||| ||    
T  14530281 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgta 14530380  T
Q  290 cagtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || ||||| || ||||||| || |||||||  ||| ||||||||| |||||    
T  14530381 caatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 14530431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 10543661 - 10543811
Alignment:
Q  191 ccttggcgcaacgg-taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||||| || ||| |||||||||||| | ||||||| | ||    
T  10543661 ccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgta 10543760  T
Q  290 cagtaca-ctaaaatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || |||| | ||||||||| || |||||||  ||| ||||||||| |||||    
T  10543761 caatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggag 10543811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 12024090 - 12024009
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||    
T  12024090 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 12024009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 23397729 - 23397809
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  23397729 ccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaa 23397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 332
Target Start/End: Original strand, 7214510 - 7214641
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac-taaa 301  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||| |||||||| ||| | ||||||| | |||| |||||  |||    
T  7214510 ggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgtacaatacacaaaaa 7214609  T
Q  302 atggtgaga-cccttcctagacactgcgtatg 332  Q
    ||||||||| ||||||   |||||||||||||    
T  7214610 atggtgagatcccttctcggacactgcgtatg 7214641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 8455488 - 8455381
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||| ||| | ||||||| | ||    
T  8455488 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgta 8455389  T
Q  290 cagtacac 297  Q
    || |||||    
T  8455388 caatacac 8455381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 24200784 - 24200685
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaa 302  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||||||| ||| |||||||||||| | ||||||| | |||| ||||| ||||    
T  24200784 ggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaa 24200685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 99437 - 99353
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||| |||||||| |||  |||||||||||    
T  99437 gagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctct--tgtaaaaaaca 99353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 5450246 - 5450330
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||  |||||||| ||||||||||| | ||| ||||||||||    
T  5450246 gagccttggtgcagcgttaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaa 5450330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 21779431 - 21779351
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||| ||||| ||| ||||||||    
T  21779431 ccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa 21779351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 4516525 - 4516439
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||     ||||||| || |||||||| ||| ||||||||||||    
T  4516525 gagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaaca 4516439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 35017778 - 35017848
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgac-tgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  ||||| |||||||| |||||||    
T  35017778 gagccttggcgcaacggtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtcctgaaaacagc 35017848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 44521553 - 44521451
Alignment:
Q  182 tagggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    ||||| ||||||||||| ||||||||||||||| ||| ||||||||||||||  | |||||| || ||||||||   ||| |||||||||||||| ||||    
T  44521553 tagggggagccttggcggaacggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaag 44521454  T
Q  282 gct 284  Q
    |||    
T  44521453 gct 44521451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Original strand, 27573584 - 27573661
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgta 267  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| || |||||| ||| |||||    
T  27573584 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgta 27573661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 21377243 - 21377151
Alignment:
Q  192 cttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    ||||| |||||||||||||||||||||||||||||||||||   | ||||||||| | |||||| | ||| |||||||||||| | |||||||    
T  21377243 cttggagcaacggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggct 21377151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 29420052 - 29419977
Alignment:
Q  199 caacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||||||||||  |||||||||||||  | |||||||||||||||||| | ||| ||||||||||||    
T  29420052 caacggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaaca 29419977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 17667978 - 17668072
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac 297  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||| | | ||| ||||||||| || | ||||||| | |||| |||||    
T  17667978 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacac 17668072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 25079890 - 25079808
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||| | |||||| | ||| ||||||||||    
T  25079890 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaa 25079808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 9671143 - 9671224
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgact-gaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| ||||||||||||||||||||||| |||| |||  |||||||| ||||||||||||| ||| ||||||||    
T  9671143 ccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaa 9671224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 17380415 - 17380343
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    |||| |||||||||||||| ||  |||||||||||||||||| ||||||||  ||||||||||| ||||||||    
T  17380415 agggggagccttggcgcaatggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaaca 17380343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 17705458 - 17705542
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||| ||||| |||||||||||||||||||||||  ||||||  ||||||||||||||||||| || ||| ||||||| ||||    
T  17705458 ccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaaca 17705542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 19977886 - 19977794
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||||||| ||| ||| |||||||||||||||||| ||||||||  |||||||||| ||||||||||| |||  ||||||||| | |||||||    
T  19977886 ccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataagg 19977794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 284
Target Start/End: Original strand, 33795258 - 33795342
Alignment:
Q  200 aacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    ||||||||||||||||||| |||| |||||||||  |||||||||||| ||||||| | ||| | |||||||||| | |||||||    
T  33795258 aacggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggct 33795342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 5841006 - 5841073
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||||||||||||| ||||||  ||||||||||||| |||||||| | | ||||||||||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaa 5841073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 22371020 - 22371087
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    ||||||| |||| ||||||||||||||||||||||||  |||||  ||||||||||||||||||||||    
T  22371020 ccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagc 22371087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 40417030 - 40416959
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||||||||||||| ||||||  ||||||||||| |||||||| | ||| || |||||||||    
T  40417030 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaaca 40416959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 17623540 - 17623634
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac 297  Q
    |||||||||||||||||| ||||| ||||||  ||||||||||||| |||||| | ||| ||||||||| || | ||||||| | |||| |||||    
T  17623540 ggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacac 17623634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 17896222 - 17896304
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||| |||||| |||||||||||||||||||||| ||||||||  || |||||||||| |||||| | ||| ||||||||||    
T  17896222 ccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaa 17896304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 25249909 - 25249843
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    |||||||||||  |||||||||||||||||||||||| ||||||  ||||||||||| |||||||||    
T  25249909 ccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacag 25249843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 35010503 - 35010549
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaa 229  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  35010503 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaa 35010549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 44604832 - 44604898
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||||| ||||||   ||||||||||||||||||| | ||| |||||||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaa 44604898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 25641487 - 25641532
Alignment:
Q  212 gttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagc 25641532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 39914465 - 39914396
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||||||||||||||| ||||||  ||| |||||| ||||||||| | ||| ||||||||||    
T  39914465 ggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaa 39914396  T

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Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 23145871 - 23145786
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||| | |||||||||||||||   ||||||||||||||  ||||||||||| || ||||||  ||| ||||||||||||    
T  23145871 gagccttggcgta-cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaaca 23145786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 23557661 - 23557576
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||| | |||||||||||||||   ||||||||||||||  ||||||||||| || ||||||  ||| ||||||||||||    
T  23557661 gagccttggcgta-cggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaaca 23557576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 14444720 - 14444773
Alignment:
Q  218 atgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 14444773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 31158598 - 31158529
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||||||||||||||||||  ||||| ||||| |  ||||||| ||| | ||||||||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaaca 31158529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 15296588 - 15296485
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtc--ttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataa 280  Q
    |||| ||||||||||| ||||||||||||||||| |  || ||||||| ||   ||||||||||||| ||||||||| | | |||||||| ||| | |||    
T  15296588 agggggagccttggcggaacggtaaagttgttgttacatggctgaaagatcatgtgggttcaagtcccggaaacagcctgttgtgtaaaatacagggtaa 15296489  T
Q  281 ggct 284  Q
    ||||    
T  15296488 ggct 15296485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 24860157 - 24860077
Alignment:
Q  192 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||||| |||||| ||||||||||||||||| |||||   ||||| ||| |||||||||| | ||| |||||||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaa 24860077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 31821517 - 31821446
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    |||| ||||||||||||||||||| |||||||   ||||||||||||||||  | ||||||||| | ||||||||    
T  31821517 agggggagccttggcgcaacggtatagttgtt---atgtgactgaaaggtcacgagttcaagtcgtagaaacagc 31821446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 32781459 - 32781312
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctac 290  Q
    ||||||||||| |||||||||||||  ||||  ||||||||||  | |||||||||  ||||||| | ||| |||||||||||| | |||| || | |||    
T  32781459 ccttggcgcaatggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaacagggtaagactgcgtac 32781360  T
Q  291 agtacactaaaatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    | |||||  |||||||| || ||||||| |||| ||| ||||| |||||    
T  32781359 aatacac-caaatggtgggaccccttcccagaccctgtgtatgcgggag 32781312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 44643485 - 44643528
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtc 233  Q
    |||||||||||| |||||||||||  ||||||||||||||||||    
T  44643485 gccttggcgcaatggtaaagttgtcatcatgtgactgaaaggtc 44643528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 10546153 - 10546207
Alignment:
Q  218 atgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||||  |||||||||||||||||||| | ||| || |||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaa 10546207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 14544026 - 14544068
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggt 232  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  14544026 ccttggcgcaattggtaaagttgttgtcatgtgactgaaaggt 14544068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 19614981 - 19615039
Alignment:
Q  216 tcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||||||||  ||||||||||||| |||||| | ||| || |||||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaaca 19615039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 26684781 - 26684711
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag-cttctagtgtaaaaaa 272  Q
    ||||||||||||||||||||| |||||||||   |||| |||||||| |||||| | ||| ||||||||||    
T  26684781 ggtaaagttgttgtcatgtgattgaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaaa 26684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 27466300 - 27466262
Alignment:
Q  193 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaag 230  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  27466300 ttggcgcaactggtaaagttgttgtcatgtgactgaaag 27466262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 39189593 - 39189556
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactga 227  Q
    |||||||||||| |||||||||||||||||||||||||    
T  39189593 ccttggcgcaactggtaaagttgttgtcatgtgactga 39189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 40762349 - 40762258
Alignment:
Q  247 ctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaatggtgagaccc-ttcctagacactgcgtatgggggag 338  Q
    ||||||||||| ||| |||||||||||  | ||||||||| |||| |||||  |||||||| ||||| ||||| ||| ||||||||| |||||    
T  40762349 ctggaaacagcctcttgtgtaaaaaactgggtaaggctacgtacaatacac-caaatggtgggaccctttcctggaccctgcgtatgtgggag 40762258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 45235976 - 45235924
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    ||||||||||| ||||||||||||||| ||  | ||||||||||| |||||||    
T  45235976 gtaaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacag 45235924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 8e-31; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 18724715 - 18724623
Alignment:
Q  192 cttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  18724715 cttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 18724623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 17470525 - 17470395
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||| |||||||| ||| |||||||||||| | |||||    
T  17470525 agggggagccttggtgcaacggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaagg 17470426  T
Q  283 ctacctacagtacactaaaatggtgagaccc 313  Q
    || | |||| ||||| ||||| ||| |||||    
T  17470425 ctgcgtacaatacaccaaaatagtgggaccc 17470395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 22327083 - 22327179
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| | ||| |||||||||||| | |||||||    
T  22327083 gagccttggcgcaacggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22327179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 20004264 - 20004140
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||||||| ||||||| | ||    
T  20004264 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgta 20004165  T
Q  290 cagtacactaa-aatggtgagaccc 313  Q
    || ||||| || ||||||| |||||    
T  20004164 caatacaccaataatggtgggaccc 20004140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 2435959 - 2435836
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||  |||| ||||| | | |||| || | ||    
T  2435959 gccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagcctgcgta 2435860  T
Q  290 cagtacactaaaatggtgagaccc 313  Q
    || ||||| ||||||||| |||||    
T  2435859 caatacaccaaaatggtgggaccc 2435836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 18944629 - 18944779
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||||||||||   |||||||| |||||||||||| ||| |||||||||||| | ||||||| | ||    
T  18944629 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 18944728  T
Q  290 cagtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || ||||| || ||||||| || |||||||  ||| ||||||||| |||||    
T  18944729 caatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggag 18944779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 22930239 - 22930158
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||    
T  22930239 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaa 22930158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 14617024 - 14617116
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||||||||||| |||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||| ||||||| |||||| |||||    
T  14617024 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaagg 14617116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 30395900 - 30395776
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||  ||||||  |||||||||||||||||||||| ||| |||||||||||| | ||||||| | ||    
T  30395900 ccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 30395801  T
Q  290 cagtacactaa-aatggtgagaccc 313  Q
    || ||||| || ||||||| |||||    
T  30395800 caatacaccaataatggtgggaccc 30395776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 34725268 - 34725188
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  34725268 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 34725188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 50811923 - 50812007
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||  ||  ||| |||||||||||||||||| ||||||||||    
T  50811923 gagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaa 50812007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 302
Target Start/End: Original strand, 27201646 - 27201745
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaa 302  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||| | ||||| | ||||||| | |||| ||||| ||||    
T  27201646 ggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgtacaatacaccaaaa 27201745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 6983988 - 6983914
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||   |||||||||||||||||||||    
T  6983988 agggagagccttggcgcaatggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagc 6983914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 32632728 - 32632647
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| ||||||||||||||||| |||||||||||||  |||||||||||||||||||||| ||| |||||||||    
T  32632728 ccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 32632647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 338
Target Start/End: Complemental strand, 23768479 - 23768344
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaa 302  Q
    |||||||||||||||||||||||| ||||||   |||||||||| |||||||||| ||| |||||||||||| | ||||||| | |||| |||||  |||    
T  23768479 ggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacac-caaa 23768381  T
Q  303 tggtgagac-ccttcctagacactgcgtatgggggag 338  Q
    ||||| ||| |||||| |||| ||||||||| |||||    
T  23768380 tggtgggacaccttcccagaccctgcgtatgcgggag 23768344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 297
Target Start/End: Original strand, 8197029 - 8197136
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||  ||||||||||||||| ||  || ||| |||||||||||| | ||||||||| ||    
T  8197029 ccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctacgta 8197128  T
Q  290 cagtacac 297  Q
    ||||||||    
T  8197129 cagtacac 8197136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 20036208 - 20036271
Alignment:
Q  192 cttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  20036208 cttggcgcaatggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 20036271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 2436065 - 2435983
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| | ||  ||||||||||    
T  2436065 gccttggtgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaa 2435983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 46991790 - 46991884
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||| | ||| |||||||||||| | |||||||    
T  46991790 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 46991884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 10668206 - 10668303
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgt-----gactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||||||||||| |||||||||||||||||||     ||||||||||||  |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  10668206 ccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaagg 10668303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 46248125 - 46247977
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||  ||||||||||| |||||||||| ||| |||||||||||| | |||| || | ||    
T  46248125 ccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgta 46248026  T
Q  290 cagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || |||||  |||||||| || |||||||  ||| ||||||||| |||||    
T  46248025 caatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggag 46247977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 273
Target Start/End: Complemental strand, 50760400 - 50760315
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaac 273  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||  |||||||||||||| ||||||| ||| ||||| |||||    
T  50760400 gagccttggcgcaaaggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaac 50760315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 273
Target Start/End: Original strand, 19701547 - 19701639
Alignment:
Q  181 ttagggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaac 273  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||||||| |||  ||||| ||||| || ||||||| ||| |||||||||||    
T  19701547 ttagggggagccttggcgcaacagtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaac 19701639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 35117930 - 35117846
Alignment:
Q  200 aacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||||||||| ||| ||| |||||||| ||| | |||||||    
T  35117930 aacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggct 35117846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 47214499 - 47214563
Alignment:
Q  193 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  47214499 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacag 47214563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 25468421 - 25468354
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||| | ||| |||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaa 25468354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 41319965 - 41319871
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac 297  Q
    |||||||||||||||||||||||||||||||   |||| |||||||||||||||  ||| |||||||||||| | ||||||| | |||| |||||    
T  41319965 ggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacac 41319871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 44485288 - 44485174
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| ||||||||||||||| |||||||||||||||||||| |||||||||  |||||  ||||||||||||| |  || |||||||| ||| | |||||    
T  44485288 agggggagccttggcgcaacagtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaagg 44485189  T
Q  283 ctacctacagtacac 297  Q
    || | |||| |||||    
T  44485188 ctgcgtacaatacac 44485174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 52910196 - 52910270
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||   ||||||| || ||||||||||    
T  52910196 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagc 52910270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 6925099 - 6925168
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||| ||| ||| ||||||||||    
T  6925099 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaa 6925168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 10378898 - 10378834
Alignment:
Q  189 agccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaa 253  Q
    |||||||| ||||||||||||||||||||| |||||||||||||   ||||||||||||||||||    
T  10378898 agccttggtgcaacggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 25290149 - 25290244
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaa--acagcttctagtgtaaaaaacaagataaggc 283  Q
    |||||||||||| |||||||||||||||||||||||||||||||  | ||||||||| |||||  ||||| ||| |||||||||||| | ||||||    
T  25290149 ccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggc 25290244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 33222971 - 33223051
Alignment:
Q  192 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||||| |||||||||||||||||||||||||||||||  || || ||||| |||||||||| ||| |||||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaa 33223051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 38478452 - 38478372
Alignment:
Q  191 ccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||  ||||||||||||| |||||||| ||| ||||||||    
T  38478452 ccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaa 38478372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 11596501 - 11596580
Alignment:
Q  192 cttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||||||||||||| | |||||||||||||||| |||  ||||||||||||| |||||| | ||| |||||||||    
T  11596501 cttggcgcaacggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaa 11596580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 245
Target Start/End: Complemental strand, 19932924 - 19932869
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagt 245  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  19932924 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 332
Target Start/End: Original strand, 35019215 - 35019357
Alignment:
Q  189 agccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacct 288  Q
    ||||||||||||||||||||||||||||||  |||||||||||||   | ||||||||||| ||||| | ||| || |||||| ||  |||||||| | |    
T  35019215 agccttggcgcaacggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaatcagtataaggctgcat 35019314  T
Q  289 acagtacactaaaatggtgagacccttcctagacactgcgtatg 332  Q
    ||| |||||  || ||||| ||||| ||| |||| |||||||||    
T  35019315 acaatacac-caattggtgggacccctcccagaccctgcgtatg 35019357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 321
Target Start/End: Complemental strand, 27136826 - 27136692
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacc 287  Q
    |||||||||| |||||||||||||||||||| |||| || |||| |  | |||||||| |||| |||| | ||| |||||||||||| | ||||| | |     
T  27136826 gagccttggcacaacggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcg 27136727  T
Q  288 tacagtacactaaaatggtgaga-cccttcctaga 321  Q
    |||| ||||| ||||||||| || |||||||||||    
T  27136726 tacaatacaccaaaatggtgggaccccttcctaga 27136692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 34714609 - 34714675
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    |||||||||||| ||||||||||||||||||||| |||||||||  ||||||||||| |||||||||    
T  34714609 ccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaacag 34714675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 45402081 - 45402161
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| ||||||||||||||||||||| || |||||   |||||||||||||||||||||| ||| |||||||||    
T  45402081 ccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaa 45402161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 12127007 - 12126927
Alignment:
Q  191 ccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||  |||||||||||||||||| | |||||||||  ||||| |||| ||||||||||||||| ||||||||    
T  12127007 ccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaa 12126927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 284
Target Start/End: Complemental strand, 15511325 - 15511229
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||||| |||||||||||||| ||||| ||||||||||     || ||||||||||||| || ||| |||||||||||| | |||||||    
T  15511325 gagccttggcgcaatggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggtaaggct 15511229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 27474280 - 27474348
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||||||||||||||   |||||||||| |||||||||  ||| |||||||||    
T  27474280 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaa 27474348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 45812707 - 45812627
Alignment:
Q  191 ccttggcgcaacgg-taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| | |||||||||||||||||||||||||||||   ||||||||||||| ||||||  ||| ||||||||    
T  45812707 ccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaa 45812627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 9939446 - 9939512
Alignment:
Q  191 ccttggcgcaac-ggtaaa-gttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    |||||||||||| |||||| |||||||||||||||||||||||||  | ||||||||||||||||||    
T  9939446 ccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaaca 9939512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 40424728 - 40424786
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcct 248  Q
    |||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||    
T  40424728 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 18742133 - 18742080
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaa 243  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  18742133 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaa 18742080  T

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Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 23371108 - 23371177
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    ||||||||||||||| ||||||||||| ||   |||||||||||||  ||||||||||||| ||||||||    
T  23371108 gagccttggcgcaacagtaaagttgttttcgcatgactgaaaggtcacgggttcaagtcctagaaacagc 23371177  T

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Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 228
Target Start/End: Original strand, 43207468 - 43207513
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaa 228  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||    
T  43207468 agggggagccttggcgcaacggtaaagttgttgtcacgtgactgaa 43207513  T

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Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 4430185 - 4430114
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||||||||||||| ||||||  ||||| ||||| || ||||||  ||| ||||||||||||    
T  4430185 ggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaaca 4430114  T

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Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 19414438 - 19414505
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||| |||| ||| |||  |||||||    
T  19414438 ggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa 19414505  T

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Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 25554896 - 25554829
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    |||||||||||||| |||||||||||||||| |||||| ||||| |  | ||| ||||||||||||||    
T  25554896 gagccttggcgcaatggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaaca 25554829  T

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Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 229
Target Start/End: Complemental strand, 28894707 - 28894664
Alignment:
Q  186 gagagccttggcgcaacggtaaagttgttgtcatgtgactgaaa 229  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  28894707 gagaaccttggcgcaacagtaaagttgttgtcatgtgactgaaa 28894664  T

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Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 223
Target Start/End: Complemental strand, 31442551 - 31442516
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtga 223  Q
    ||||||||||||||||||||||||||||||||||||    
T  31442551 gagccttggcgcaacggtaaagttgttgtcatgtga 31442516  T

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Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 34679398 - 34679352
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaa 229  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||    
T  34679398 agggggagctttggcgcaacggtaaagttattgtcatgtgactgaaa 34679352  T

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Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 302
Target Start/End: Original strand, 35005139 - 35005221
Alignment:
Q  220 gtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaa 302  Q
    ||||||||||||||  ||||||||||| || ||||||| ||| |||||||||||| | ||||||| | |||| ||||| ||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaa 35005221  T

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Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 46859050 - 46859099
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggt 232  Q
    |||| ||||||||||||||| |||||||||||||||  ||||||||||||    
T  46859050 agggggagccttggcgcaacagtaaagttgttgtcacttgactgaaaggt 46859099  T

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Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 22151505 - 22151557
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    ||||||||||||||| |||||| |||||| | ||||||||| |||||||||||    
T  22151505 taaagttgttgtcatctgactgtaaggtcataggttcaagttctggaaacagc 22151557  T

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Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 49546081 - 49546037
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggt 232  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||    
T  49546081 gagctttggcgcaacggtaaagttgttgtcacgtggctgaaaggt 49546037  T

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Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 6358113 - 6358163
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtc 233  Q
    |||| ||||||||||||||||||||| ||||| |||  |||||||||||||    
T  6358113 agggggagccttggcgcaacggtaaatttgttttcacatgactgaaaggtc 6358163  T

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Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 43768168 - 43768210
Alignment:
Q  214 tgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    |||||||| |||||||||||  |||||||||||||||||||||    
T  43768168 tgtcatgtcactgaaaggtcacgggttcaagtcctggaaacag 43768210  T

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Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 31272522 - 31272465
Alignment:
Q  214 tgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||| ||||||||||||||   ||||||||||||||||||| | ||| |||||||||    
T  31272522 tgtcacgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaa 31272465  T

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Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 39215129 - 39215048
Alignment:
Q  192 cttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaac 273  Q
    |||||| |||| |||||||| |||||| |||||| |||||||    |||||||| ||||||||| | ||| |||||||||||    
T  39215129 cttggcacaacagtaaagttattgtcacgtgactaaaaggtcccaagttcaagtactggaaacaacctcttgtgtaaaaaac 39215048  T

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Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 271
Target Start/End: Complemental strand, 19974221 - 19974165
Alignment:
Q  215 gtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||| ||||||||||| ||  ||||||||||| |||||||||| || ||||||||||    
T  19974221 gtcacgtgactgaaagatcacgggttcaagtcttggaaacagcctcaagtgtaaaaa 19974165  T

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Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 24564330 - 24564414
Alignment:
Q  191 ccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||  ||||||||| |||| ||||| |||||||||   | |||||||| |||||||| | ||| ||||||||||||    
T  24564330 ccttggcgcaaccagtaaagttgatgtcttgtgattgaaaggtcgcagattcaagtcttggaaacaacctcttgtgtaaaaaaca 24564414  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 35253329 - 35253277
Alignment:
Q  218 atgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||| ||  ||||||||||||| |||||||| ||| ||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaa 35253277  T

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Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 487309 - 487190
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacc 287  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| | ||| ||||| |||||||| ||| ||| |     
T  487309 gagccttggcgtaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgcg 487210  T
Q  288 tacagtacactaaaatggtg 307  Q
    |||| |||||||||||||||    
T  487209 tacaatacactaaaatggtg 487190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 16408775 - 16408691
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| ||||||||||||    
T  16408775 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaca 16408691  T

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Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 20224947 - 20225027
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||||||    
T  20224947 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa 20225027  T

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Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 48598995 - 48598915
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  48598995 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 48598915  T

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Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 198 - 284
Target Start/End: Original strand, 35567141 - 35567227
Alignment:
Q  198 gcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||  || |||||||||||| | |||||||    
T  35567141 gcaacggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggct 35567227  T

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Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 5648222 - 5648303
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||    
T  5648222 ccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 5648303  T

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Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 6430797 - 6430716
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||||||||    
T  6430797 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaa 6430716  T

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Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 5306835 - 5306755
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  5306835 ccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 5306755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 19027803 - 19027918
Alignment:
Q  182 tagggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    ||||| ||| |||| ||||| |||| ||||||||||| ||||||||||||||  |||||||||||||||||||| | ||| |||||||||||| | ||||    
T  19027803 tagggggagtcttgacgcaatggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaag 19027902  T
Q  282 gctacctacagtacac 297  Q
    ||| | |||| |||||    
T  19027903 gctgcgtacaatacac 19027918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 21646927 - 21647009
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||| |||||||||||||||||||||||| ||||||   ||||||||||||||||||||| ||| ||||||||||    
T  21646927 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaa 21647009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 313
Target Start/End: Original strand, 36589700 - 36589829
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| ||||||||||||||||||||||||| |||||  ||||||||| |||   ||||||||||||||||||||| ||| |||||||||||| | ||| |    
T  36589700 agggggagccttggcgcaacggtaaagttgatgtcacatgactgaaacgtc-caggttcaagtcctggaaacagcctcttgtgtaaaaaacatggtaatg 36589798  T
Q  283 ctacctacagtacactaaaatggtgagaccc 313  Q
    ||    ||||||||| ||||||||| |||||    
T  36589799 ctgttgacagtacaccaaaatggtgggaccc 36589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 42164317 - 42164239
Alignment:
Q  193 ttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||| | ||| |||||||||    
T  42164317 ttggcgcaacggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaa 42164239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 54640511 - 54640429
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||  ||||||||||| |||||||||| ||| ||||||||||    
T  54640511 gccttggcgcaacggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaa 54640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 49938770 - 49938681
Alignment:
Q  183 agggagagccttggcgcaacggtaaa-gttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||| ||||| ||||||||||||||| |||||||||| ||||||||||||||   ||||||||||||||||||||| ||| |||||||||    
T  49938770 agggggagccctggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 49938681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 313
Target Start/End: Original strand, 16911525 - 16911649
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||| |||||||| ||| ||||| ||| || | ||||||| | ||    
T  16911525 ccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgta 16911624  T
Q  290 cagtacactaa-aatggtgagaccc 313  Q
    || ||||| || ||||||| |||||    
T  16911625 caatacaccaataatggtgggaccc 16911649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 200 - 312
Target Start/End: Complemental strand, 39029223 - 39029111
Alignment:
Q  200 aacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacacta 299  Q
    |||||||||||||||||| ||||||| ||||||| | |||||||| | |||||||||| ||| |||||||||||| | |||||||   |||| ||||| |    
T  39029223 aacggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacacga 39029124  T
Q  300 aaatggtgagacc 312  Q
    |||||||| ||||    
T  39029123 aaatggtgggacc 39029111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 203 - 338
Target Start/End: Original strand, 40915805 - 40915939
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaa 302  Q
    |||||||||||||||||||||||  ||||||  |||||||||||||||||||||| ||| |||| ||||||||| ||||||| | |||| |||||  |||    
T  40915805 ggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacaaggtaaggctgcgtacaatacac-caaa 40915902  T
Q  303 tggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    ||||| || |||||||  ||| ||||||||| |||||    
T  40915903 tggtgggagcccttcccggaccctgcgtatgcgggag 40915939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 47528700 - 47528620
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||| ||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||| ||||||||    
T  47528700 ccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa 47528620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 23580387 - 23580296
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||  |||||| |||||||||||||| ||||||||||||||  |||||||||| || |||| ||| ||| ||||||||||||    
T  23580387 agggagagccttgatgcaacgctaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaaca 23580296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 313
Target Start/End: Original strand, 30639343 - 30639464
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| ||||||||||||||| |||||||||||||||   ||||||||||||||||||||  ||| |||| ||||||| | ||||||| | ||    
T  30639343 ccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgt-aaaaacagggtaaggctgcgta 30639441  T
Q  290 cagtacactaaaatggtgagaccc 313  Q
    || |||||  ||||||||||||||    
T  30639442 caatacac-caaatggtgagaccc 30639464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 313
Target Start/End: Original strand, 54175020 - 54175149
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctgg-aaacagcttctagtgtaaaaaacaagataag 281  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||||| |||  || |||||||||||| ||||||| ||| |||| ||||||| | ||||    
T  54175020 agggggagccttggcgcaacgataa-gttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgt-aaaaacagggtaag 54175117  T
Q  282 gctacctacagtacactaaaatggtgagaccc 313  Q
    ||| | |||| ||||| ||||||||| |||||    
T  54175118 gctgcgtacaatacaccaaaatggtgggaccc 54175149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 54966985 - 54967068
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||||||||||||||||||||||||||||||||    |||||||| ||||||| | | ||| ||||||||||||    
T  54966985 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaaca 54967068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 11054316 - 11054238
Alignment:
Q  193 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| ||||||  ||| ||||||||    
T  11054316 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgtgtaaaa 11054238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 14590800 - 14590882
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||| |||||||||||||||||||||||||||||||  || |||||||||| |||||||| ||| || |||||||    
T  14590800 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaa 14590882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 17315470 - 17315377
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||| |||||| | ||| |||| ||||||||| |||||||    
T  17315470 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgt-aaaaacaaggtaaggct 17315377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 17043570 - 17043459
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| ||| ||||||||||||   |||||||||||| ||||||||||||||   ||||||||||||||||||||| ||| |||||||| ||| | |||||    
T  17043570 agggggagtcttggcgcaacg---aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaagg 17043474  T
Q  283 ctacctacagtacac 297  Q
    || | |||| |||||    
T  17043473 ctgcgtacaatacac 17043459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 272
Target Start/End: Original strand, 54730214 - 54730294
Alignment:
Q  193 ttggcgcaa-cggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||| |||||||||||||||||||||||  |||||||  ||||||||||||| |||||||| ||| ||||||||||    
T  54730214 ttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaa 54730294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 267
Target Start/End: Complemental strand, 12257767 - 12257688
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgta 267  Q
    |||||||| |||||||||||||||||||||| |||| |||||||||  |||||||| |||| |||||||| ||| |||||    
T  12257767 gagccttgacgcaacggtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagcgtcttgtgta 12257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 44363291 - 44363220
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||||||||||||||||||||  | |||||||||||| ||||||| ||  ||||||||||||    
T  44363291 ggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaaca 44363220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 50856415 - 50856344
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaac 254  Q
    |||| |||||||||||||||||||||||||||||||  ||| |||||||||  ||||||||||||| |||||    
T  50856415 agggggagccttggcgcaacggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 10660367 - 10660516
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| ||||||||||||||||||||||||||||||     |||||||||||||||||| | |||  ||||||||| | | || |||| | ||    
T  10660367 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcata 10660466  T
Q  290 cagtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || ||||| || |||||||||| ||||||| |||| ||||||||| |||||    
T  10660467 caatacaccaataatggtgagaccccttccaagac-ctgcgtatgcgggag 10660516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 10874512 - 10874661
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| ||||||||||||||||||||||||||||||     |||||||||||||||||| | |||  ||||||||| | | || |||| | ||    
T  10874512 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgcata 10874611  T
Q  290 cagtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || ||||| || |||||||||| ||||||| |||| ||||||||| |||||    
T  10874612 caatacaccaataatggtgagaccccttccaagac-ctgcgtatgcgggag 10874661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 302
Target Start/End: Original strand, 25343152 - 25343262
Alignment:
Q  192 cttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctaca 291  Q
    |||||||||| |||||||||||||||| |||||||| |||||   ||||||||| ||||||| ||  ||| |||||||||||| | ||||||| | ||||    
T  25343152 cttggcgcaatggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggctgcgtaca 25343251  T
Q  292 gtacactaaaa 302  Q
     ||||| ||||    
T  25343252 atacaccaaaa 25343262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 30352763 - 30352681
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||  |||||  ||||||||||||||| ||| ||||||||||    
T  30352763 ccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaa 30352681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 39077948 - 39077886
Alignment:
Q  208 agttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||| ||| ||||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 39077886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 284
Target Start/End: Original strand, 51420529 - 51420631
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtc-ttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    |||| |||||||||||||||||| |||||||||||| ||||||||||||||  | | |||||||| |||||||| | ||| ||||| |||||| | ||||    
T  51420529 agggggagccttggcgcaacggtgaagttgttgtcacgtgactgaaaggtcagttgattcaagtcatggaaacaacctcttgtgtagaaaacagggtaag 51420628  T
Q  282 gct 284  Q
    |||    
T  51420629 gct 51420631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 284
Target Start/End: Original strand, 43035224 - 43035305
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||||||| ||||||||||||||  |||||||||||| ||||||| | ||| |||||| ||||| | |||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggct 43035305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 23501756 - 23501812
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtc 246  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  23501756 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 23501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 25463108 - 25463168
Alignment:
Q  213 ttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaac 273  Q
    |||||||||||||||||||||  |||||||||||||||||||| | ||| |||||||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaac 25463168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 272
Target Start/End: Complemental strand, 30690349 - 30690273
Alignment:
Q  196 gcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||| || |||||| ||||||| ||||||||||||||  |||||||||||||||||| ||| ||| ||||||||||    
T  30690349 gcgcagcgctaaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaa 30690273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 32629444 - 32629373
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    |||| ||||||||||||||||||||||||||   |||||||||||||||||  |||||||| |||| ||||||||    
T  32629444 agggggagccttggcgcaacggtaaagttgt---catgtgactgaaaggtcacgggttcaaatcctcgaaacagc 32629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 37494814 - 37494898
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||| ||||| ||||||||||||| |||| ||||||||||||   ||||||||||||||||||| | ||| ||||||||||||    
T  37494814 ccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaaca 37494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 47441704 - 47441636
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||   |||||||||||  |||||||    
T  47441704 gagctttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacag 47441636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 20908817 - 20908686
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactg-aaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||| ||     ||||||||| |||||||| | |||  | ||||||| ||| ||||    
T  20908817 agggggagccttggcacaacggtaaagttgttgtcatgtgactgaaaatgttacatgttcaagtcatggaaacatcgtcttttctaaaaaagaaggtaag 20908718  T
Q  282 gctacctacagtacactaaaatggtgagaccc 313  Q
    ||| | |||| ||||| ||||||||| |||||    
T  20908717 gctgcgtacaatacaccaaaatggtgggaccc 20908686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 30496500 - 30496413
Alignment:
Q  183 agggagagccttggcgcaacggtaaa-gttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaa 269  Q
    |||| ||| ||||||||||| ||||| |||||||||| ||||||||||||||  | ||||||||| |||||||||| ||| |||||||    
T  30496500 agggggagacttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaa 30496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 7385628 - 7385566
Alignment:
Q  210 ttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||| ||  ||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaa 7385566  T

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Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 13256569 - 13256466
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||| ||||| |||||||||||||||||||||||| |||||| | ||||||||||||||    ||| ||| |||||||||||| | ||||||| | ||    
T  13256569 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctgg----agcctcttgtgtaaaaaacagggtaaggctgcgta 13256474  T
Q  290 cagtacac 297  Q
    || |||||    
T  13256473 caatacac 13256466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 30581639 - 30581557
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||||| ||||||||||||||  | ||| |||||||  ||||||||||| |||||||| | ||| ||||||||||    
T  30581639 gccttggcgcaacgctaaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaa 30581557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 32478942 - 32478876
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||| || |||||   ||||||||||||||||||| | |||||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaa 32478876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 5313166 - 5313097
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagctt 259  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||  |||||||| ||||| |||||||||    
T  5313166 ccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaacagctt 5313097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 7038041 - 7038132
Alignment:
Q  215 gtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaatggtg 307  Q
    |||||||||||||||||||   |||||||||||| |||||||||||| |||||||||| | | |||| || | |||| ||||| |||||||||    
T  7038041 gtcatgtgactgaaaggtcacaggttcaagtcct-gaaacagcttcttgtgtaaaaaatagggtaagacttcgtacaatacaccaaaatggtg 7038132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 338
Target Start/End: Original strand, 14983810 - 14983945
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaa 302  Q
    ||||||||||||||||| ||| || ||||||  || |||||||| | |||||||| ||| |||||||||| | | ||||| | |||||| |||||| |||    
T  14983810 ggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaaggttgcctacaatacact-aaa 14983908  T
Q  303 tggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    ||||| || |||||||  ||| ||||||||| |||||    
T  14983909 tggtgggaccccttcccggaccctgcgtatgcgggag 14983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 41018945 - 41018885
Alignment:
Q  210 ttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||| | ||| ||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 41018885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 20639777 - 20639682
Alignment:
Q  244 gtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    |||||||||||||| ||| |||||||||||| | ||||||| | |||| ||||| ||||||||| || |||||||  ||| ||||||||| |||||    
T  20639777 gtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggag 20639682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 49938612 - 49938529
Alignment:
Q  189 agccttggcgcaacggtaaa-gttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||   | |||||||| ||||| |||| | | |||||||||    
T  49938612 agccttggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgtaaaaa 49938529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 266
Target Start/End: Complemental strand, 8473790 - 8473716
Alignment:
Q  193 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgt 266  Q
    |||||||||| ||||||||||||||||| |||| | |||||   |||||||||||||||||||||| ||| ||||    
T  8473790 ttggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgt 8473716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 9832468 - 9832403
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||| ||||||| || |||||||||||||  |||||||||||||| ||||||| ||| ||||||||    
T  9832468 taaaattgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa 9832403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 41549344 - 41549425
Alignment:
Q  189 agccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||| ||||||||||||| ||  ||| ||||| |||  |||||||||| ||||||||| | ||| ||||||||    
T  41549344 agccttggcgcaaaggtaaagttgttgacacatgattgaaatgtcacgggttcaagttctggaaacaacctcttgtgtaaaa 41549425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 47443929 - 47444027
Alignment:
Q  203 ggtaaagttgttgtcatgtgactga----aaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac 297  Q
    |||||||||||| ||||||||| ||    ||||||  |||||||||||||||||||||| ||| | |||||||||| | ||||||| | |||| |||||    
T  47443929 ggtaaagttgttctcatgtgaccgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacac 47444027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 3581015 - 3580952
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtc 246  Q
    |||| ||||||||||||  | |||||||||||||||||||||||||| |||  | |||||||||    
T  3581015 agggggagccttggcgcggcagtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtc 3580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 44357196 - 44357248
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    ||||||||| |||| |||| ||||||||||| || ||||||||||| ||||||    
T  44357196 ggtaaagttattgttatgtaactgaaaggtcatgagttcaagtcctagaaaca 44357248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 190 - 313
Target Start/End: Complemental strand, 34420816 - 34420693
Alignment:
Q  190 gccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||| |||||||||||| | ||||||| | ||    
T  34420816 gccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 34420717  T
Q  290 cagtacactaaaatggtgagaccc 313  Q
    |  ||||| ||||||||| |||||    
T  34420716 ccatacaccaaaatggtgggaccc 34420693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 188 - 366
Target Start/End: Original strand, 25944452 - 25944628
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacc 287  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| || ||| |||||||||||  |  ||||||       
T  25944452 gagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggctgag 25944551  T
Q  288 tacagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggaggagctttaatgcatcaggctgccctttt 366  Q
    |||| ||||| ||||||||| || |||||||  ||| ||||||||| |   |||||||||  ||| ||||||||||||||    
T  25944552 tacaatacaccaaaatggtgggaccccttccctgaccctgcgtatgtg---ggagctttagcgcaccaggctgccctttt 25944628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 188 - 366
Target Start/End: Complemental strand, 53996740 - 53996564
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacc 287  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||  | ||||||||| |||||||| | ||| |||||||||||| | ||||||| |     
T  53996740 gagccttggcgctacggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggctgct 53996641  T
Q  288 tacagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggaggagctttaatgcatcaggctgccctttt 366  Q
    |||| ||||| ||||||||| || |||||||  ||||||||||||| |   ||||||||| |||| | ||||||||||||    
T  53996640 tacaatacaccaaaatggtgggaccccttccctgacactgcgtatgtg---ggagctttagtgcaccgggctgccctttt 53996564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 8247861 - 8247711
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||| | ||||| | | ||    
T  8247861 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgta 8247762  T
Q  290 cagtacactaa-aatggtgagac-ccttcctagacactgcgtatgggggag 338  Q
    || ||||| || ||||||| ||| ||||||  ||| ||||||||| |||||    
T  8247761 caatacaccaataatggtgggactccttcccggaccctgcgtatgcgggag 8247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 297
Target Start/End: Original strand, 26573113 - 26573219
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctac 290  Q
    |||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||  |||||||||||| | ||||||| | |||    
T  26573113 ccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtac 26573212  T
Q  291 agtacac 297  Q
    | |||||    
T  26573213 aatacac 26573219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 46421209 - 46421059
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||| |||||||||||| | ||||||| | ||    
T  46421209 ccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 46421110  T
Q  290 cagtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || ||||| || ||||||| || |||||||  ||| ||||||||| |||||    
T  46421109 caatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 46421059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 40272984 - 40272836
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||| | ||| |||||||||||| | ||||||| | ||    
T  40272984 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 40272885  T
Q  290 cagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || |||||  |||||||| || |||||||  ||| ||||||||| |||||    
T  40272884 caatacac-caaatggtgggaccccttcccggaccctgcgtatgcgggag 40272836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 183 - 272
Target Start/End: Complemental strand, 45621008 - 45620919
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||| ||| ||||||||||    
T  45621008 agggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaa 45620919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 13730776 - 13730682
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  13730776 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 13730682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 10870123 - 10870042
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||    
T  10870123 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 10870042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 369
Target Start/End: Complemental strand, 13628948 - 13628786
Alignment:
Q  206 aaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaa-aatg 304  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||||| ||||| | ||||||| | |||| ||||| || ||||    
T  13628948 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatg 13628849  T
Q  305 gtgaga-cccttcctagacactgcgtatgggggaggagctttaatgcatcaggctgcccttttatg 369  Q
    ||| || |||||||  ||| ||||||||| |   ||||||||| |||| | || ||||||||||||    
T  13628848 gtgggaccccttcccggaccctgcgtatgcg---ggagctttagtgcaccgggttgcccttttatg 13628786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 30928310 - 30928227
Alignment:
Q  199 caacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    ||||||| ||||| |||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||||| |||||    
T  30928310 caacggtcaagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaagg 30928227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 35417894 - 35417985
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| |||||  | |||||| ||||||||||||| ||| ||||||||||||    
T  35417894 agggggagccttggcgcaacggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaaaca 35417985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 9607188 - 9607282
Alignment:
Q  191 ccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    ||||||||||||  |||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| | |||||||||| | |||||||    
T  9607188 ccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggct 9607282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 29366894 - 29366744
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||| || ||||||||| | ||||||| | ||    
T  29366894 ccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgta 29366795  T
Q  290 cagtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || ||||| || ||||||| || |||||||  ||| ||||||||| |||||    
T  29366794 caatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggag 29366744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 22609752 - 22609832
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||||||||||||||||||| |||||   ||||||||||| |||||||||| ||| |||||||||    
T  22609752 ccttggcgcaacggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaa 22609832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 12914207 - 12914059
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||    |||||||||||||||||||| ||| |||||||||||| | ||||||  | ||    
T  12914207 ccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgta 12914108  T
Q  290 cagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || |||||  ||||||||||| ||||||| |||| |||| |||| |||||    
T  12914107 caatacac-caaatggtgagaccccttcccagaccctgcatatgcgggag 12914059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 26869696 - 26869773
Alignment:
Q  195 ggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||| |||||||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaa 26869773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 52926382 - 52926305
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgta 267  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||    
T  52926382 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 53062026 - 53062107
Alignment:
Q  193 ttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||||| ||  |||| |||||||    
T  53062026 ttggcgcatcggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaaca 53062107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 1217075 - 1217155
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  1217075 ccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 1217155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 7697057 - 7696977
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||  ||| ||||||||    
T  7697057 ccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 7696977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 284
Target Start/End: Original strand, 516417 - 516488
Alignment:
Q  213 ttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 516488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 5173876 - 5173811
Alignment:
Q  206 aaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| | ||| |||||||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 5173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 4495836 - 4495713
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||  |||||||||||||| ||| ||| | | |||||||||||| | ||||||| | ||    
T  4495836 ccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgta 4495737  T
Q  290 cagtacactaaaatggtgagaccct 314  Q
    || |||||  |||||||| ||||||    
T  4495736 caatacac-caaatggtgggaccct 4495713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 22123087 - 22123007
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||| || |||||| ||||||||||||||||||||||||  |||||||||||||||||||||  ||| ||||||||    
T  22123087 ccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaaaa 22123007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 39203515 - 39203581
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||||||||||||||||||||   |||||||||||| |||||||| ||| ||||||||    
T  39203515 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa 39203581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 45949015 - 45948903
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactga---aaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||||||||| |||||||| ||||||||||||   ||||||  |||||||| ||||||||||| | ||| |||||||||| | | |||||||    
T  45949015 gagccttggcgcaacggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggct 45948916  T
Q  285 acctacagtacac 297  Q
     | |||| |||||    
T  45948915 gcatacaatacac 45948903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 6411993 - 6411912
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||| |||||| ||||||||||||||||||| ||||| ||||| |||||||||||| || ||||||| ||| |||||||||    
T  6411993 ccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaa 6411912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 332
Target Start/End: Original strand, 16735426 - 16735567
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgta-aaaaacaagataaggctacct 288  Q
    |||||||||||| |||||||||||||||||||||||| || |||  ||||||||||||| |||||||| |||  |||| ||||||| | ||||||| | |    
T  16735426 ccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctct--tgtagaaaaacagggtaaggctgcgt 16735523  T
Q  289 acagtacactaaaatggtgaga-cccttcctagacactgcgtatg 332  Q
    ||| |||||  |||||||| || |||||||  |||||||||||||    
T  16735524 acaatacac-caaatggtgggaccccttcccggacactgcgtatg 16735567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 19730996 - 19731079
Alignment:
Q  199 caacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||||||||| ||||||||| |||| |||||||||  || | ||||||||||||| ||| ||| |||||||||||||| |||||    
T  19730996 caacggtaaatttgttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaaacaaggtaagg 19731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 33926094 - 33926149
Alignment:
Q  216 tcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaa 33926149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 286
Target Start/End: Complemental strand, 43956631 - 43956536
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctac 286  Q
    |||||||||||||||||||||||||| |  ||||||||| |||  ||||||| || ||||||||||| ||  |||||||||| || | ||||||||    
T  43956631 ccttggcgcaacggtaaagttgttgttacttgactgaaaagtccggggttcatgttctggaaacagcctcatgtgtaaaaaaaaacacaaggctac 43956536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 274
Target Start/End: Original strand, 7942993 - 7943059
Alignment:
Q  208 agttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||||||||| ||||||  || ||||||||||||||||||| ||| || |||||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaaca 7943059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 44403735 - 44403634
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| ||||||||| |||||||||||||| |||||| ||| || |||||||   |||| ||||||||| || ||| ||| |||||||| ||||| |||||    
T  44403735 agggggagccttggtgcaacggtaaagttattgtcacgtggctaaaaggtcacaggttaaagtcctgggaatagcctcttgtgtaaaagacaaggtaagg 44403636  T
Q  283 ct 284  Q
    ||    
T  44403635 ct 44403634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 54032705 - 54032624
Alignment:
Q  216 tcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac 297  Q
    ||||||||||| ||||||  |||||||||||||||||||| | ||| |||||||||||| | ||||||| | |||| |||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacac 54032624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 10795551 - 10795447
Alignment:
Q  236 gggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtaca-ctaaaatggtgaga-cccttcctagacactgcgtatgg 333  Q
    |||||||||||||||||||||| ||| |||||||| ||| | ||||||| | |||| |||| | ||||||||| || |||||||| ||| |||||||||     
T  10795551 gggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgtacaatacaccaaaaatggtgggaccccttcctggaccctgcgtatgc 10795452  T
Q  334 gggag 338  Q
    |||||    
T  10795451 gggag 10795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 333
Target Start/End: Complemental strand, 1121404 - 1121253
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| |||||||||||||||  |||| ||||||||  ||| ||||||||||  | ||| |||||||||||||| ||||| |||||| ||| ||| | ||     
T  1121404 agggggagccttggcgcaacactaaatttgttgtccggtggctgaaaggtcacgtgtttaagtcctggaaacaacttcttgtgtaagaaataaggtgaga 1121305  T
Q  283 ctacctacagtacactaaaatggtgagacccttcct-agacactgcgtatgg 333  Q
    || | |||| ||||| ||||||| | || |||| || |||| ||||||||||    
T  1121304 ctgcgtacaatacaccaaaatggcgggagcctttctcagaccctgcgtatgg 1121253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 29106527 - 29106641
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| |||| ||||||||||||||||  |||||||||||| || |||| ||  |||| |||||| || ||||| | ||| |||||||||| | |||||||    
T  29106527 agggggagctttggcgcaacggtaaaaatgttgtcatgtggctcaaagatcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataagg 29106626  T
Q  283 ctacctacagtacac 297  Q
     ||| |||| |||||    
T  29106627 ttacgtacaatacac 29106641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 14986989 - 14987066
Alignment:
Q  237 ggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaa-aatggtgagaccc 313  Q
    ||||||||||||||||||||| ||| |||||||||||| | ||||||| | |||| ||||| || ||||||| |||||    
T  14986989 ggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 14987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 25517355 - 25517302
Alignment:
Q  181 ttagggagagccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtc 233  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||| ||||||    
T  25517355 ttagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtc 25517302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 12525414 - 12525486
Alignment:
Q  212 gttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||| |||||||||||||   ||||| ||||||||||||||| ||| ||||||||| || | |||||||    
T  12525414 gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggct 12525486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 55400984 - 55401024
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaagg 231  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  55400984 ccttggcacaacggtaaagttgttgtcatgtgactaaaagg 55401024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 238 - 338
Target Start/End: Complemental strand, 43114994 - 43114892
Alignment:
Q  238 gttcaagtcctggaaacagcttctagtgt-aaaaaacaagataa-ggctacctacagtacactaaaatggtgagacccttcctaga-cactgcgtatggg 334  Q
    |||||||||||||||||||| ||| |||| |||||||| | ||| ||||||||||| |||||  |||||||| |||||||||| || | ||||||||| |    
T  43114994 gttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaagggctacctacaatacac-caaatggtgggacccttcctggacccctgcgtatgcg 43114896  T
Q  335 ggag 338  Q
    ||||    
T  43114895 ggag 43114892  T

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Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 337
Target Start/End: Complemental strand, 45139624 - 45139502
Alignment:
Q  216 tcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtaca-ctaaaatggtgaga-ccc 313  Q
    ||||||||||||||||||  ||||||||||  |||||||| | ||| |||||||| ||| | ||||||| | |||| |||| | ||||||||| || |||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaaatggtgggacccc 45139525  T
Q  314 ttcctagacactgcgtatggggga 337  Q
    |||| |||| ||||||||| ||||    
T  45139524 ttcccagac-ctgcgtatgcggga 45139502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 21330421 - 21330379
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaag 230  Q
    |||||||||||||| |||||||| |||||||||||||| ||||    
T  21330421 gagccttggcgcaatggtaaagtggttgtcatgtgacttaaag 21330379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 39211992 - 39212066
Alignment:
Q  207 aagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    ||||||| || |||||||||||| |||  |||||||||||||||||| | | ||| ||||||| |||||| ||||    
T  39211992 aagttgtcgttatgtgactgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaag 39212066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Complemental strand, 829611 - 829574
Alignment:
Q  193 ttggcgcaacggtaaagttgttgtcatgtgactgaaag 230  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  829611 ttggcgcaacggtaaagttgttgtcacgtgattgaaag 829574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 31542404 - 31542441
Alignment:
Q  196 gcgcaacggtaaagttgttgtcatgtgactgaaaggtc 233  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  31542404 gcgcaacggtaaagttgttgtcatatgattgaaaggtc 31542441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 313
Target Start/End: Complemental strand, 54374488 - 54374395
Alignment:
Q  220 gtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaatggtgagaccc 313  Q
    ||||||||||||||   |||||||||| |||||||| | ||| |||||||||| | | ||||||| | |||| | ||| ||||||||| |||||    
T  54374488 gtgactgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgtacaatccaccaaaatggtgggaccc 54374395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 202 - 282
Target Start/End: Original strand, 19751575 - 19751655
Alignment:
Q  202 cggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    ||||||| || |||||| |||| |||||||||  || | ||||||||||||| ||| ||| ||||||||| |||| |||||    
T  19751575 cggtaaattttttgtcacgtgattgaaaggtcacggatgcaagtcctggaaatagcctcttgtgtaaaaatcaaggtaagg 19751655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 28904931 - 28904963
Alignment:
Q  193 ttggcgcaacggtaaagttgttgtcatgtgact 225  Q
    |||| ||||||||||||||||||||||||||||    
T  28904931 ttggtgcaacggtaaagttgttgtcatgtgact 28904963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 55401208 - 55401284
Alignment:
Q  237 ggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaatggtgagaccc 313  Q
    ||||||||||||| ||||||| ||| |||||||||||| | |||| || | || | ||||| ||||||||| |||||    
T  55401208 ggttcaagtcctgtaaacagcctcttgtgtaaaaaacaggttaagactgcgtataatacaccaaaatggtgggaccc 55401284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 39461168 - 39461018
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| ||| ||||||||||||   ||||||| | ||    
T  39461168 ccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgta 39461069  T
Q  290 cagtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || ||||| || |||||||||| |||||||  ||| ||||||||| |||||    
T  39461068 caatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggag 39461018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 42083878 - 42083748
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||  |||||||||||||||||||||| | | ||||||||||   |  ||||    
T  42083878 agggagagccttggcgcaacggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaagg 42083779  T
Q  283 ctacctacagtacactaaaatggtgagaccc 313  Q
    || | ||||||| || ||||||||| |||||    
T  42083778 ctgcgtacagtataccaaaatggtgggaccc 42083748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 312
Target Start/End: Complemental strand, 14018148 - 14018019
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| |||||||||||||||||||| |||||||||| |||| ||||||||| |||||||||||| |||||||||  ||| |||||||||||| | | ||     
T  14018148 agggggagccttggcgcaacggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtgaga 14018049  T
Q  283 ctacctacagtacactaaaatggtgagacc 312  Q
    || | |||| ||||||||| ||||| ||||    
T  14018048 ctgcgtacaatacactaaattggtgggacc 14018019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 183 - 284
Target Start/End: Complemental strand, 44781685 - 44781584
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||| ||  |||||||||||||||||||| | ||| |||||||| ||| | |||||    
T  44781685 agggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaagg 44781586  T
Q  283 ct 284  Q
    ||    
T  44781585 ct 44781584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 7136701 - 7136577
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||| | ||| ||||||||| || | ||||||| | ||    
T  7136701 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgta 7136602  T
Q  290 cagtacactaa-aatggtgagaccc 313  Q
    || ||||| || ||||||| |||||    
T  7136601 caatacaccaataatggtgggaccc 7136577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 12670420 - 12670340
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  12670420 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 12670340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 20869668 - 20869588
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  20869668 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20869588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 30454267 - 30454187
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  30454267 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 30454187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 28817798 - 28817691
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||||| | ||||||| | ||    
T  28817798 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 28817699  T
Q  290 cagtacac 297  Q
    || |||||    
T  28817698 caatacac 28817691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 297
Target Start/End: Original strand, 36720759 - 36720866
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||||| | ||||||| | ||    
T  36720759 ccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 36720858  T
Q  290 cagtacac 297  Q
    || |||||    
T  36720859 caatacac 36720866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 17823540 - 17823630
Alignment:
Q  192 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataag 281  Q
    ||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| ||||||||| || ||||||    
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataag 17823630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 28407378 - 28407460
Alignment:
Q  190 gccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||    
T  28407378 gccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 28407460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 35261642 - 35261790
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  ||||||||| |||||||||||  ||| |||||||||||| | ||||| | | ||    
T  35261642 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgta 35261741  T
Q  290 cagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || |||||  |||||||| || |||||||| ||| ||||||||| |||||    
T  35261742 caatacac-caaatggtgggaccccttcctggaccctgcgtatgcgggag 35261790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 18164930 - 18164850
Alignment:
Q  192 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||||| ||| |||||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||    
T  18164930 cttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 18164850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 30962947 - 30962863
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||  |  ||||||||||||||||||| ||| ||||||||||    
T  30962947 gagccttggcgcaacggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaa 30962863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 313
Target Start/End: Original strand, 6760786 - 6760909
Alignment:
Q  192 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctac 290  Q
    ||||||||||| ||||||||||||||||| |||||  ||||||  |||||||||||||||||||||| ||| |||||||||||| | ||||||| | |||    
T  6760786 cttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgtac 6760885  T
Q  291 agtacactaa-aatggtgagaccc 313  Q
    | ||||| || ||||||| |||||    
T  6760886 aatacaccaataatggtgggaccc 6760909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 2626482 - 2626564
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||  |||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  2626482 ccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaa 2626564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 20284245 - 20284163
Alignment:
Q  191 ccttggcgcaacgg-taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| || |||||||    
T  20284245 ccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaa 20284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 21070874 - 21070792
Alignment:
Q  191 ccttggcgcaacgg-taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| || |||||||    
T  21070874 ccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaa 21070792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 315
Target Start/End: Original strand, 22598128 - 22598244
Alignment:
Q  198 gcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac 297  Q
    |||||||||||||||||||||  |||||||||||||  |||||||| ||||||||||| | ||| |||||||||||| | ||||||||  |||| |||||    
T  22598128 gcaacggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggctatgtacaatacac 22598227  T
Q  298 taaaatggtgagaccctt 315  Q
      || |||||||||||||    
T  22598228 -caattggtgagaccctt 22598244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 29521857 - 29521709
Alignment:
Q  191 ccttggcgcaacgg-taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| | ||||||||||||| |||||||| ||||||  |||||||||||||||||||||| ||| || ||||||||| | ||||||| | ||    
T  29521857 ccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgta 29521758  T
Q  290 cagtacactaaaatggtgag-acccttcctagacactgcgtatgggggag 338  Q
    || |||||  |||||||| | |||| ||| |||| ||||||||| |||||    
T  29521757 caatacac-caaatggtgggaacccatcccagaccctgcgtatgcgggag 29521709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 44530112 - 44530260
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||| ||||||||||||  ||||||  ||||||||||| |||||||| | ||| |||||||||||| | ||||||| | ||    
T  44530112 ccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 44530211  T
Q  290 cagtacactaaaatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || |||||  |||||||| || |||||||| ||| ||||||||| |||||    
T  44530212 caatacac-caaatggtgggaccccttcctggaccctgcgtatgcgggag 44530260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 8484113 - 8484026
Alignment:
Q  187 agagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||||||||||||  |||| || |||||| ||| ||| ||||||||||||||||||||| | ||| ||||||||||||    
T  8484113 agagccttggcgcaacggtaaagcggttgccacgtgacttaaatgtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaaca 8484026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 13160669 - 13160746
Alignment:
Q  195 ggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||| |||||||||||||||||||||||| ||||||  ||||||||||||| |||||||| ||| |||||||||    
T  13160669 ggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaa 13160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 24245414 - 24245478
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaac 254  Q
    |||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  24245414 ccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 44742690 - 44742568
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctac 290  Q
    |||||| ||||||||||||||||||||  |||| || |||||| || |||||||| |||||||||   ||  |||||||||||| | ||||||| | |||    
T  44742690 ccttggtgcaacggtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaaggctgcgtac 44742591  T
Q  291 agtacactaaaatggtgagaccc 313  Q
    | ||||| ||||||||| |||||    
T  44742590 aatacaccaaaatggtgggaccc 44742568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 26954108 - 26954177
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||||||||| |  ||||||  |||||||||||||||||||||| ||| ||||||||||    
T  26954108 ggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaa 26954177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 45071241 - 45071309
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||||||||||||||| || ||||||  |||||||||| ||||||||||| ||| |||||||||    
T  45071241 ggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaa 45071309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 8897923 - 8897829
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacac 297  Q
    |||||||||||||||||||||| | ||||||  ||||| |||||||||||||| |  || |||||||||| | | ||||||||| |||| |||||    
T  8897923 ggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgtacaatacac 8897829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 25250485 - 25250567
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||| |||| |||||||||||||||||||||||| ||||||    |||||||||||||||||||| | | ||||||||||    
T  25250485 ccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaa 25250567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 24365218 - 24365150
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||||||||||||| ||| |||  ||||||||| ||| |||||||| ||| ||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaa 24365150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 26457680 - 26457760
Alignment:
Q  192 cttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||||||||||||||  |||| ||||||||| |||||||| ||| |  ||| || |||| ||||||||||    
T  26457680 cttggcgcaacggtaaagttgttgtcgcgtgattgaaaggtcatgggttcaggtcttaaaaagagtttcttgtgtaaaaaa 26457760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 35105902 - 35105966
Alignment:
Q  206 aaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||| ||| ||||||||||  |||||||||||||||||||| | ||| ||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 35105966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 31457155 - 31457217
Alignment:
Q  209 gttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||| ||||||||||  |||||||||||||| ||||| | ||| |||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaa 31457217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 11748282 - 11748343
Alignment:
Q  210 ttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||| |||  ||||||||||| |||||||||| |||  ||||||||    
T  11748282 ttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaa 11748343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 11001110 - 11001027
Alignment:
Q  202 cggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgt-aaaaaacaagataaggct 284  Q
    |||||||||||||||||||||| |||||||||  |||||||| | ||| ||||| | |   |||| ||||||||||||||||||    
T  11001110 cggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaaattctgaaaacaacctactgtgtaaaaaaacaagataaggct 11001027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 23000365 - 23000309
Alignment:
Q  213 ttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||||  ||||  |||||||||||||||| ||| |||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaa 23000309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 12625865 - 12625934
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||| |||||||   |||||  ||| |||||||||||||||| | ||| ||||||||||    
T  12625865 ggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaa 12625934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 5135415 - 5135379
Alignment:
Q  236 gggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  5135415 gggttcaagtcctggaaacagcctcttgtgtaaaaaa 5135379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 38879544 - 38879694
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| || ||||||||| | ||||||| | ||    
T  38879544 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgta 38879643  T
Q  290 cagtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    || ||||| || ||||||| || |||||||  ||| ||||||||| |||||    
T  38879644 caatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 38879694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 23974744 - 23974825
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| | ||| ||||||||||    
T  23974744 ccttggcgcaacggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaa 23974825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 313
Target Start/End: Complemental strand, 4619278 - 4619154
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||| ||| ||| |||||||||||| | ||||||| | ||    
T  4619278 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgta 4619179  T
Q  290 cagtacactaa-aatggtgagaccc 313  Q
    || ||||| || ||||||| |||||    
T  4619178 caatacaccaataatggtgggaccc 4619154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 43334165 - 43334247
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||  ||||||||||    
T  43334165 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaa 43334247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 41014282 - 41014363
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||| |||||||||    
T  41014282 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 41014363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 35710276 - 35710356
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  35710276 ccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 35710356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 37024726 - 37024646
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  37024726 ccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 10634320 - 10634253
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    |||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  10634320 gagccttggcgcaacggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaaca 10634253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 297
Target Start/End: Original strand, 24448853 - 24448960
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||||||||||||| | | |||||||||| | | ||||||| | ||    
T  24448853 ccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgta 24448952  T
Q  290 cagtacac 297  Q
    || |||||    
T  24448953 caatacac 24448960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 27328728 - 27328839
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaa-a 301  Q
    |||||||||||||||||||||||||||||||   ||||||||||||||||||||  ||| |||||||||||| | ||||||| | |||| ||||| || |    
T  27328728 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaata 27328827  T
Q  302 atggtgagaccc 313  Q
    |||||| |||||    
T  27328828 atggtgggaccc 27328839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 39301079 - 39301170
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||| |||| | ||| ||||| ||||||    
T  39301079 agggggagccttggcgcaacggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaaca 39301170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 1565394 - 1565476
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||| | ||||||||    
T  1565394 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaa 1565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 22025507 - 22025600
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    ||||||||| |||||||||||||||||   | | |||||||||||| ||||||||||||||||||||||| ||| |||||||||||| | |||||||    
T  22025507 gagccttggtgcaacggtaaagttgtt---acgcgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 22025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 39079945 - 39079875
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaa 253  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||    
T  39079945 agggtgagccttggcgcaacggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 8170154 - 8170074
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||| ||||||||  |||||||||||||||||||||| | | ||||||||    
T  8170154 ccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa 8170074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 313
Target Start/End: Complemental strand, 209106 - 208977
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| ||||||||||||| |||||||||||||||||||||||| |||||||    ||||||||||||| |||| | ||| |||| ||||||| | |||||    
T  209106 agggggagccttggcgcagcggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgt-aaaaacagggtaagg 209008  T
Q  283 ctacctacagtacactaaaatggtgagaccc 313  Q
    || | | || ||||| ||||||||| |||||    
T  209007 ctgcattcaatacaccaaaatggtgggaccc 208977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 22187262 - 22187360
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaa 302  Q
    |||||||||||||||| |||||||||||||   |||| |||||||||||||||| ||| |||||||||||| |||||| || | |||| ||||| ||||    
T  22187262 gtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgtacaatacaccaaaa 22187360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 200 - 313
Target Start/End: Complemental strand, 28516596 - 28516483
Alignment:
Q  200 aacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacacta 299  Q
    ||||||||||||||||||| ||| ||||||||||  ||||||||||| |||||||| | ||| |||||||||||| | || |||| | |||| ||||  |    
T  28516596 aacggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgtacaatacatca 28516497  T
Q  300 aaatggtgagaccc 313  Q
    |||||||| |||||    
T  28516496 aaatggtgggaccc 28516483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 32703411 - 32703467
Alignment:
Q  214 tgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 32703467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 19143116 - 19143008
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacc 287  Q
    |||||||||||||| |||||| ||||||||| |||||| ||| | |   ||||||||||||||||||| | ||| |||| ||||||| | ||||||| |     
T  19143116 gagccttggcgcaatggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaaggctgcg 19143018  T
Q  288 tacagtacac 297  Q
    ||||||||||    
T  19143017 tacagtacac 19143008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 247 - 367
Target Start/End: Original strand, 29334415 - 29334533
Alignment:
Q  247 ctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaaaatggtgagaccc-ttcctagacactgcgtatgggggaggagcttt 345  Q
    ||||||||||| ||| |||||||||||||| ||||||| | |||| ||||| | ||||||| ||||| ||||  ||| ||||||||| |   ||| ||||    
T  29334415 ctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccagaatggtgggacccattcccggaccctgcgtatgtg---ggatcttt 29334511  T
Q  346 aatgcatcaggctgccctttta 367  Q
    |||||| | |||||||||||||    
T  29334512 aatgcaccgggctgccctttta 29334533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 13801899 - 13801817
Alignment:
Q  232 tcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaa-aatggtgagaccc 313  Q
    ||||||||||||||||||||| |||| ||| |||||||||||| | ||||||| | |||| ||||| || ||||||| |||||    
T  13801899 tcttgggttcaagtcctggaagcagcctcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaataatggtgggaccc 13801817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 34074735 - 34074650
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||| | |||| ||||||||||  |||||||||||||    ||||||||||| |||||||| ||| ||||||||||||    
T  34074735 gagccttggcgcagcagtaa-gttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaaca 34074650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 22861823 - 22861758
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||||||||||||||||||||  || |||||||||| ||| |||  ||| ||||||||    
T  22861823 taaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaa 22861758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 22908035 - 22907955
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||| |||| ||||| |||||||||||   ||||||||||||||||  ||||||||||||  |||||||| ||| |||||||||    
T  22908035 gagctttggggcaacagtaaagttgtt---atgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaa 22907955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 24313739 - 24313682
Alignment:
Q  198 gcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    |||||| ||||||||||||||  ||||||||||||| || ||||||||| ||||||||    
T  24313739 gcaacgataaagttgttgtcacatgactgaaaggtcatgtgttcaagtcttggaaaca 24313682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 24356076 - 24356019
Alignment:
Q  198 gcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    |||||| ||||||||||||||  ||||||||||||| || ||||||||| ||||||||    
T  24356076 gcaacgataaagttgttgtcacatgactgaaaggtcatgtgttcaagtcttggaaaca 24356019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 31694277 - 31694224
Alignment:
Q  193 ttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtc 246  Q
    |||||||||| ||||||||||||||| |||||||| ||||| | ||||||||||    
T  31694277 ttggcgcaacagtaaagttgttgtcacgtgactgataggtcataggttcaagtc 31694224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 1850624 - 1850684
Alignment:
Q  211 tgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||||||  |||||||||||| ||||| | | ||| |||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaa 1850684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 22600430 - 22600482
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    |||||||||||| ||||||||||| |||||   ||||||||||||||||||||    
T  22600430 ggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaaca 22600482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Original strand, 43574559 - 43574603
Alignment:
Q  189 agccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtc 233  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||    
T  43574559 agccttggcgcaatgataaagttgttgtcacgtgactgaaaggtc 43574603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 17419890 - 17419945
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagct 258  Q
    |||||| ||||||| |||||||||||||||   | |||||||||||||||||||||    
T  17419890 ggtaaaattgttgtaatgtgactgaaaggttacgagttcaagtcctggaaacagct 17419945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 2838741 - 2838823
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactg-aaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||| |||||||||||||||||||||||| |||||||  | | |||||||   |||||||| ||| |||||||||    
T  2838741 ccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaa 2838823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 338
Target Start/End: Complemental strand, 12006485 - 12006352
Alignment:
Q  207 aagttgttgtcatgtgactgaaaggtc-ttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaa-aatg 304  Q
    |||||||||||||||||||||||||||   |||||||||| ||||||||| | |||  ||||||||| | | ||||||| | |||| ||||| || ||||    
T  12006485 aagttgttgtcatgtgactgaaaggtcacggggttcaagt-ctggaaacaacctcttatgtaaaaaatagggtaaggctccatacaatacaccaataatg 12006387  T
Q  305 gtgaga-cccttcctagacactgcgtatgggggag 338  Q
    ||| || ||||||| |||| |||| |||| |||||    
T  12006386 gtgggaccccttcccagaccctgcctatgcgggag 12006352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 1405170 - 1405215
Alignment:
Q  210 ttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    ||||||||||||||||  ||||||  ||||||||||||||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaca 1405215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 20135623 - 20135691
Alignment:
Q  246 cctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaa-aatggtgagaccc 313  Q
    |||||||||||| ||| |||||||||||||| ||||||| | |||| ||||| || ||||||| |||||    
T  20135623 cctggaaacagcctcttgtgtaaaaaacaaggtaaggctgcgtacaatacaccaataatggtgggaccc 20135691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 233
Target Start/End: Complemental strand, 28208264 - 28208236
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtc 233  Q
    |||||||||||||||||||||||||||||    
T  28208264 taaagttgttgtcatgtgactgaaaggtc 28208236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 192 - 338
Target Start/End: Complemental strand, 12222088 - 12221939
Alignment:
Q  192 cttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctac 290  Q
    ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||| |||||||||||| | ||||||| | |||    
T  12222088 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtac 12221989  T
Q  291 agtacactaa-aatggtgaga-cccttcctagacactgcgtatgggggag 338  Q
    | ||||| || ||||||| || |||||||  ||| ||||||||| |||||    
T  12221988 aatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggag 12221939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 276
Target Start/End: Complemental strand, 14975252 - 14975166
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaag 276  Q
    |||||||||||| |||||||||||||||||||||||| ||||||  || ||||||||||||||||||| ||| ||||||||||||||    
T  14975252 ccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaacaag 14975166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 13905150 - 13905057
Alignment:
Q  191 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| ||||  | ||| |||||||||||| | |||||||    
T  13905150 ccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaaggct 13905057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 1346927 - 1347007
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||  || ||||||||    
T  1346927 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaa 1347007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 1354927 - 1354847
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||| ||||||||    
T  1354927 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa 1354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 8409206 - 8409300
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||| |||||||||||||| ||||||||||||||||  || |||||||||||||||| || ||| |||||||||||| | |||||||    
T  8409206 ccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggct 8409300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 210 - 338
Target Start/End: Complemental strand, 29356009 - 29355879
Alignment:
Q  210 ttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacctacagtacactaa-aatggtga 308  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||| |||||| ||||| | ||||||| | |||| ||||| || |||||||     
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgtacaatacaccaataatggtgg 29355910  T
Q  309 ga-cccttcctagacactgcgtatgggggag 338  Q
    || |||||||  ||| ||||||||| |||||    
T  29355909 gaccccttcccggaccctgcgtatgcgggag 29355879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 9161098 - 9161167
Alignment:
Q  202 cggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||| |||||||||    
T  9161098 cggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 9161167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 2166570 - 2166492
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||||||||| | ||| |||||||| ||| |||||||    
T  2166570 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataagg 2166492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 2178203 - 2178125
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||||||||| | ||| |||||||| ||| |||||||    
T  2178203 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataagg 2178125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 3815249 - 3815183
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    |||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  3815249 ccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacag 3815183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 307
Target Start/End: Complemental strand, 7947551 - 7947427
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    |||| ||||||||||||||||||||||||| |||   ||||||||||||||   ||||||| ||||||||||| | ||  ||||||||| || | |||||    
T  7947551 agggggagccttggcgcaacggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaagg 7947452  T
Q  283 ctacctacagtacactaaaatggtg 307  Q
    || | |||| ||||| |||||||||    
T  7947451 ctgcgtacaatacaccaaaatggtg 7947427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 12889382 - 12889473
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||| |||||||||| |||||||||||||||||||| |||| |||||||||   |||||||||| || ||||||| ||| |||| |||||||    
T  12889382 agggggagccttggcacaacggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaaca 12889473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 313
Target Start/End: Original strand, 11849016 - 11849139
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctacc 287  Q
    ||||||| |||||||||||||||| |||||| ||||||||||  | || ||||||||||| ||||||| | ||| |||| ||||||| ||||| | | ||    
T  11849016 gagccttagcgcaacggtaaagttattgtcacgtgactgaaa--tgtttggttcaagtccaggaaacaacctcttgtgttaaaaacaggataaagttgcc 11849113  T
Q  288 tacagtacactaaaatggtgagaccc 313  Q
     ||| ||||| ||||||||| |||||    
T  11849114 cacaatacaccaaaatggtgggaccc 11849139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 14553488 - 14553556
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||||||||||||||||| |||||||   ||||||||||||||||| ||||||| ||||||||||    
T  14553488 ggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaa 14553556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 15866209 - 15866125
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||| |||| ||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||| |||   ||||||||||    
T  15866209 ccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaaca 15866125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 301
Target Start/End: Original strand, 20400630 - 20400741
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||  |||| ||||||||||||||||||||||||||   |||||||||  ||||||||   ||| |||||||||||| | |||| || | ||    
T  20400630 ccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgta 20400729  T
Q  290 cagtacactaaa 301  Q
    ||||||||||||    
T  20400730 cagtacactaaa 20400741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 255
Target Start/End: Complemental strand, 2755583 - 2755531
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    ||||||||||||||||||||||||||||||| | |||||||||| || |||||    
T  2755583 ggtaaagttgttgtcatgtgactgaaaggtcgtaggttcaagtcttgcaaaca 2755531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 272
Target Start/End: Original strand, 24734598 - 24734678
Alignment:
Q  193 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||| |||||||||||||||||||||||||||||||    |||||| |||| |||||| | ||| ||||||||||    
T  24734598 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaaaa 24734678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 6024209 - 6024280
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||||||||||| || ||||||  || ||||| |||| |||||||| ||| ||||||||||||    
T  6024209 ggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaaca 6024280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 33923000 - 33922936
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaac 254  Q
    |||||||||||| ||||||||||||||||| ||||||||| |||   |||||||||||| |||||    
T  33923000 ccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaac 33922936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 297
Target Start/End: Original strand, 1941818 - 1941925
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||| ||||| ||||||||||||||||| |||||| ||||||  || || ||||| || ||||| | ||| |||||||||||| | ||||||| | ||    
T  1941818 ccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 1941917  T
Q  290 cagtacac 297  Q
    || |||||    
T  1941918 caatacac 1941925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 272
Target Start/End: Original strand, 12063445 - 12063512
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||| ||||| ||||||||||||  ||||||||||||| |||| ||| ||| || |||||||    
T  12063445 taaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctcttgtataaaaaa 12063512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 17432332 - 17432387
Alignment:
Q  219 tgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||||   ||||||||||||||||||| | ||| ||||||||||||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaaca 17432387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 28007604 - 28007671
Alignment:
Q  205 taaagttgttgtcatgtgac-tgaaa-ggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||||||||||| ||||| ||||  |||||||||||||||||| ||| ||| ||||||||    
T  28007604 taaagttgttgtcatgtgacatgaaaaggtcacgggttcaagtcctggaaagagcctcttgtgtaaaa 28007671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 22967149 - 22967215
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||| |||||||||||||| ||||||    ||||||||| |||||||| ||||| |||||||||    
T  22967149 taaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaa 22967215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 23821244 - 23821178
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||| |||||||||||||| ||||||    ||||||||| |||||||| ||||| |||||||||    
T  23821244 taaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaa 23821178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 32728314 - 32728244
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    ||||||||||||||||||||||||||||||   | |||||||  |||||||| | |||  |||||||||||    
T  32728314 gtaaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaaca 32728244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 8417448 - 8417501
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacag 256  Q
    ||||||||||||||||||||||||||| |||  | ||||| ||| |||||||||    
T  8417448 ggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaacag 8417501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 15290475 - 15290434
Alignment:
Q  188 gagccttggcgcaacggtaaagttgttgtcatgtgactgaaa 229  Q
    |||||||||||||||||| ||||| | |||||||||||||||    
T  15290475 gagccttggcgcaacggttaagttatcgtcatgtgactgaaa 15290434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 23240971 - 23240914
Alignment:
Q  213 ttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||| ||||||||||||||   ||| ||||||||||||||||| ||| ||||||||    
T  23240971 ttgtcacgtgactgaaaggtcacaggtgcaagtcctggaaacagcctcttgtgtaaaa 23240914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Complemental strand, 27855597 - 27855528
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    ||||||||| ||||||||||||||||| |||  | ||| |||||| | ||||||||||  ||||||||||    
T  27855597 ggtaaagtttttgtcatgtgactgaaatgtcgcgagtttaagtcccgaaaacagcttcctgtgtaaaaaa 27855528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 53; Significance: 3e-21; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 10220 - 10140
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||| |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  10220 ccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 20548 - 20468
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||| |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  20548 ccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 8908 - 8964
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtc 246  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||   ||||||||||    
T  8908 ccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 19236 - 19292
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtc 246  Q
    |||||||||||| ||| ||||||||||||||||||||||| |||   ||||||||||    
T  19236 ccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 19292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 30542 - 30622
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||| ||||||||    
T  30542 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa 30622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 13195 - 13089
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||| | || ||||||||| ||||||| | ||    
T  13195 ccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgt-aaaaacaaggtaaggctgcgta 13097  T
Q  290 cagtacac 297  Q
    || |||||    
T  13096 caatacac 13089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 365
Target Start/End: Original strand, 58940 - 59114
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggctaccta 289  Q
    |||||| ||||| |||||| || |||||||||||||||||||||  |||||||||||||||||||||| ||| || ||||||||| | |||| || | ||    
T  58940 ccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgta 59039  T
Q  290 cagtaca-ctaaaatggtgaga-cccttcctagacactgcgtatgggggaggagctttaatgcatcaggctgcccttt 365  Q
    || |||| | ||||||||| || ||||||| |||| ||||||||| |   ||||||||| |||||| || ||||||||    
T  59040 caatacaccaaaaatggtgggaccccttcccagactctgcgtatgcg---ggagctttagtgcatcgggttgcccttt 59114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 203 - 270
Target Start/End: Complemental strand, 1744 - 1677
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | ||| ||||||||    
T  1744 ggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa 1677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 4134 - 4212
Alignment:
Q  204 gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataagg 282  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||||||||| | ||| |||||||| ||| |||||||    
T  4134 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataagg 4212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 284
Target Start/End: Complemental strand, 24939 - 24850
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaacaagataaggct 284  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||     |||||| ||| |||||||||||| | |||||||    
T  24939 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggtaaggct 24850  T

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Target: scaffold0057; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 47062 - 46995
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctgg 250  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||||  | |||||||||||||    
T  47062 agggagagccttggcgcaatagtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtcctgg 46995  T

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Target: scaffold0057; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 191 - 272
Target Start/End: Original strand, 46794 - 46876
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||  |||||||||||||||||||||||  ||||||  |||||||||| ||||||||| | ||| ||||||||||    
T  46794 ccttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaa 46876  T

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Target: scaffold0005 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 272
Target Start/End: Complemental strand, 226578 - 226496
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaa 272  Q
    |||||||||||| |||||||||||||||||||||||||||||||  || |||||||||| |||||||| ||| || |||||||    
T  226578 ccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaa 226496  T

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Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 11095 - 11174
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaa 270  Q
    |||||||||||| |||||||||||| | ||||||||||||||||  |||||||||||||||||||||| ||| ||||||||    
T  11095 ccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 11174  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 83838 - 83903
Alignment:
Q  191 ccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaaca 255  Q
    ||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  83838 ccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 83903  T

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Target: scaffold0116 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 8867 - 8935
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    |||||||||||||||||||||||| ||||||   ||||||| ||||||||||| ||||| |||||||||    
T  8867 ggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaaa 8935  T

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Target: scaffold0167 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 23559 - 23646
Alignment:
Q  183 agggagagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||||||||||||||||||||||||||||    ||||||||||||||    ||||||||||| || ||||| | ||| ||||||||||||    
T  23559 agggagagccttggcgcaacggtaaagttgt----atgtgactgaaagggtacgggttcaagtcttgcaaacaacctcttgtgtaaaaaaca 23646  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 274
Target Start/End: Original strand, 10773 - 10857
Alignment:
Q  191 ccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaaaca 274  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||  |||||||||  ||| ||||| | ||| ||||||||||||    
T  10773 ccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaaca 10857  T

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Target: scaffold0194 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 24642 - 24694
Alignment:
Q  205 taaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagc 257  Q
    |||||||||||||| ||||||| ||||||  ||||||||||||||||||||||    
T  24642 taaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaacagc 24694  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 43105 - 43173
Alignment:
Q  203 ggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcctggaaacagcttctagtgtaaaaa 271  Q
    ||||||||| ||||||||||| |||||||||  | ||||| ||||| |||||||| ||| |||||||||    
T  43105 ggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaa 43173  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 32902 - 32950
Alignment:
Q  199 caacggtaaagttgttgtcatgtgactgaaaggtcttgggttcaagtcc 247  Q
    |||||||| |||||||| || |||||| ||||||| |||||||||||||    
T  32902 caacggtatagttgttgccacgtgacttaaaggtcatgggttcaagtcc 32950  T

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