View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16223_high_19 (Length: 207)
Name: NF16223_high_19
Description: NF16223
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16223_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 11615802 - 11615980
Alignment:
| Q |
20 |
ataagttatatcagatgaaagaatgttgctatgatcctgttcaatggttggagaaacaatatcaaagatactcaacaaatagttcaattcctatatctag |
119 |
Q |
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| T |
11615802 |
ataagttatatcagatgaaagaatgttgctatgatcctgttcaatggttggagaaacaatatcaaagatactcaacaaatagttcaattcctatatctag |
11615901 |
T |
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| Q |
120 |
ttccatttctttagatgatggattggtgtatgttcatagagtaaaagtaactccttccaaaatatatttctgtgctcct |
198 |
Q |
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| T |
11615902 |
ttccatttctttagatgatggattggtgtatgttcatagagtaaaagtaactccctccaaaatatatttctgtggtcct |
11615980 |
T |
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