View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16224_high_2 (Length: 257)
Name: NF16224_high_2
Description: NF16224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16224_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 48958617 - 48958860
Alignment:
| Q |
14 |
atatactacagatgtagctcaaattgaaagtcactgaaataagtaaactatatgttgaaaatgttaaggaaagacatgtcatataaaactacacgatttt |
113 |
Q |
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| T |
48958617 |
atatactacagatgtagctcaaattgaaagtcactgaaatcagtaaactatatgttgaaaatgttaaggaaagacatgtcatataaaactacacgatttt |
48958716 |
T |
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| Q |
114 |
gcatgtaggatatgttttagacgtaagtaaaggaaagttaaactcaataaccttactaaaagaagctggacaatgtaataatatgcatgcatgtattatg |
213 |
Q |
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| T |
48958717 |
gcatgtaggatatgttttagacgtaagtaaaggaaagttaaactcaataactttactaaaagaagctggacaatgtaataatatgcatgcatgtattatg |
48958816 |
T |
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| Q |
214 |
tatgaggattcggttgagtaagatgaatattaacccaaacccat |
257 |
Q |
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| T |
48958817 |
tatgaggattcggttgagtaagatgaatattaacccaaacccat |
48958860 |
T |
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