View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16226_high_11 (Length: 239)

Name: NF16226_high_11
Description: NF16226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16226_high_11
NF16226_high_11
[»] chr8 (27 HSPs)
chr8 (79-173)||(504127-504221)
chr8 (79-173)||(14547922-14548016)
chr8 (79-173)||(12831047-12831141)
chr8 (79-173)||(15197333-15197427)
chr8 (79-173)||(23122603-23122697)
chr8 (79-173)||(34012302-34012396)
chr8 (79-173)||(37038479-37038573)
chr8 (79-173)||(40423949-40424043)
chr8 (79-173)||(1179946-1180040)
chr8 (80-173)||(5957831-5957924)
chr8 (79-171)||(44507095-44507187)
chr8 (79-173)||(10284637-10284731)
chr8 (79-173)||(15048188-15048281)
chr8 (98-173)||(8841438-8841513)
chr8 (84-173)||(10621093-10621182)
chr8 (79-173)||(43414587-43414681)
chr8 (80-173)||(9122196-9122279)
chr8 (79-169)||(16383377-16383467)
chr8 (79-168)||(17443825-17443914)
chr8 (79-173)||(4854869-4854963)
chr8 (79-169)||(34307216-34307306)
chr8 (79-162)||(14055609-14055692)
chr8 (79-169)||(24307803-24307893)
chr8 (79-144)||(30479509-30479574)
chr8 (79-142)||(24307629-24307692)
chr8 (79-173)||(15258935-15259029)
chr8 (79-173)||(42221515-42221609)
[»] chr5 (24 HSPs)
chr5 (79-173)||(36732948-36733042)
chr5 (82-173)||(18520890-18520981)
chr5 (79-173)||(13811652-13811746)
chr5 (79-173)||(2740274-2740368)
chr5 (79-173)||(40145407-40145501)
chr5 (79-173)||(14831814-14831908)
chr5 (79-173)||(33149644-33149738)
chr5 (79-173)||(35785199-35785293)
chr5 (79-173)||(42414308-42414402)
chr5 (79-173)||(35943898-35943992)
chr5 (79-173)||(28177775-28177869)
chr5 (79-173)||(6679698-6679792)
chr5 (79-173)||(15409616-15409710)
chr5 (79-170)||(41470425-41470516)
chr5 (79-169)||(3921275-3921365)
chr5 (79-173)||(26720516-26720610)
chr5 (79-173)||(26990265-26990359)
chr5 (123-173)||(31009032-31009082)
chr5 (80-138)||(36875644-36875702)
chr5 (128-171)||(31132393-31132436)
chr5 (79-169)||(2252178-2252268)
chr5 (79-173)||(20073522-20073616)
chr5 (123-173)||(21370048-21370098)
chr5 (79-147)||(33825356-33825424)
[»] chr3 (30 HSPs)
chr3 (79-173)||(53982011-53982105)
chr3 (79-173)||(33644200-33644294)
chr3 (79-173)||(49607414-49607508)
chr3 (79-173)||(54868901-54868995)
chr3 (84-173)||(52629305-52629394)
chr3 (79-173)||(8076393-8076487)
chr3 (79-173)||(17470405-17470499)
chr3 (79-173)||(27714897-27714991)
chr3 (80-173)||(31456690-31456783)
chr3 (79-155)||(11095377-11095453)
chr3 (79-173)||(26141538-26141632)
chr3 (83-169)||(48587101-48587187)
chr3 (90-173)||(26754706-26754789)
chr3 (79-158)||(33118872-33118951)
chr3 (79-164)||(36707439-36707524)
chr3 (79-173)||(20764921-20765015)
chr3 (79-173)||(35536626-35536720)
chr3 (79-173)||(41189770-41189864)
chr3 (79-173)||(11907371-11907465)
chr3 (79-173)||(14623845-14623939)
chr3 (79-161)||(24699972-24700054)
chr3 (83-173)||(30801739-30801829)
chr3 (79-173)||(11347928-11348022)
chr3 (79-173)||(51419366-51419460)
chr3 (80-173)||(13898061-13898154)
chr3 (79-173)||(9562999-9563093)
chr3 (79-161)||(41080709-41080790)
chr3 (79-173)||(47531865-47531959)
chr3 (79-169)||(45058563-45058652)
chr3 (101-169)||(36331339-36331407)
[»] chr1 (29 HSPs)
chr1 (79-173)||(2581915-2582009)
chr1 (79-173)||(48716288-48716382)
chr1 (79-173)||(9474882-9474976)
chr1 (79-173)||(3000319-3000413)
chr1 (79-173)||(8346394-8346488)
chr1 (79-173)||(27564741-27564835)
chr1 (79-173)||(38632327-38632421)
chr1 (82-173)||(44548382-44548473)
chr1 (79-173)||(38595154-38595248)
chr1 (79-173)||(47452326-47452420)
chr1 (79-173)||(51898689-51898783)
chr1 (79-173)||(50630458-50630552)
chr1 (79-173)||(32813247-32813341)
chr1 (79-173)||(43132-43226)
chr1 (79-173)||(41758805-41758899)
chr1 (80-172)||(11152385-11152476)
chr1 (79-173)||(37649198-37649292)
chr1 (109-173)||(13414791-13414855)
chr1 (82-169)||(26274435-26274522)
chr1 (99-173)||(45044566-45044640)
chr1 (79-169)||(5959010-5959100)
chr1 (91-173)||(49811533-49811615)
chr1 (79-169)||(50591010-50591100)
chr1 (79-169)||(41608503-41608593)
chr1 (79-173)||(23597097-23597191)
chr1 (91-173)||(26440746-26440828)
chr1 (84-173)||(44453984-44454073)
chr1 (128-173)||(48489349-48489394)
chr1 (128-173)||(44334176-44334221)
[»] chr2 (32 HSPs)
chr2 (82-173)||(28863458-28863549)
chr2 (79-173)||(9058480-9058574)
chr2 (79-173)||(10249388-10249482)
chr2 (79-173)||(32505654-32505748)
chr2 (79-173)||(33436106-33436200)
chr2 (79-173)||(7465741-7465835)
chr2 (79-173)||(13438343-13438437)
chr2 (79-173)||(17473020-17473114)
chr2 (79-173)||(40701478-40701572)
chr2 (79-173)||(5574494-5574588)
chr2 (79-173)||(28381661-28381755)
chr2 (79-173)||(30915463-30915557)
chr2 (82-173)||(19930826-19930917)
chr2 (79-173)||(27864704-27864798)
chr2 (79-173)||(4060685-4060779)
chr2 (79-173)||(20700815-20700909)
chr2 (79-173)||(40613908-40614002)
chr2 (79-162)||(38882831-38882913)
chr2 (79-173)||(42257193-42257287)
chr2 (79-173)||(2533124-2533217)
chr2 (79-173)||(26891510-26891604)
chr2 (79-173)||(38273148-38273242)
chr2 (79-147)||(33436211-33436279)
chr2 (79-173)||(17820010-17820104)
chr2 (80-162)||(41575138-41575220)
chr2 (79-169)||(43490121-43490211)
chr2 (92-173)||(3439992-3440073)
chr2 (97-169)||(2997497-2997569)
chr2 (122-173)||(3737986-3738037)
chr2 (79-169)||(38732354-38732444)
chr2 (79-171)||(36168836-36168928)
chr2 (79-169)||(45097745-45097835)
[»] chr7 (32 HSPs)
chr7 (79-173)||(7389389-7389483)
chr7 (79-173)||(8080389-8080483)
chr7 (79-173)||(19329842-19329936)
chr7 (79-173)||(36361919-36362013)
chr7 (79-173)||(38267040-38267134)
chr7 (82-173)||(3783998-3784089)
chr7 (79-173)||(3434562-3434656)
chr7 (79-173)||(4999520-4999614)
chr7 (79-173)||(35137533-35137627)
chr7 (79-173)||(36362026-36362120)
chr7 (79-173)||(38837217-38837311)
chr7 (79-173)||(19436193-19436287)
chr7 (79-173)||(40957707-40957801)
chr7 (79-173)||(21234401-21234495)
chr7 (82-173)||(3694370-3694461)
chr7 (79-173)||(46374808-46374902)
chr7 (80-173)||(32951499-32951592)
chr7 (79-169)||(8238212-8238303)
chr7 (84-173)||(35522881-35522970)
chr7 (79-173)||(36208173-36208267)
chr7 (79-169)||(38044197-38044287)
chr7 (79-169)||(7727906-7727996)
chr7 (79-145)||(10343597-10343663)
chr7 (79-169)||(22343361-22343451)
chr7 (79-169)||(39255934-39256023)
chr7 (79-169)||(41915741-41915831)
chr7 (79-171)||(46033809-46033901)
chr7 (79-169)||(11044188-11044268)
chr7 (79-168)||(40846124-40846213)
chr7 (79-171)||(41423682-41423774)
chr7 (128-173)||(16374830-16374875)
chr7 (79-144)||(32564461-32564526)
[»] chr6 (18 HSPs)
chr6 (79-173)||(6209471-6209565)
chr6 (79-173)||(32869678-32869772)
chr6 (82-173)||(22880664-22880755)
chr6 (79-173)||(17598554-17598648)
chr6 (79-173)||(11427616-11427712)
chr6 (79-173)||(29857827-29857921)
chr6 (91-165)||(31109414-31109488)
chr6 (79-173)||(31976248-31976342)
chr6 (79-168)||(15832577-15832666)
chr6 (79-173)||(31110767-31110859)
chr6 (110-173)||(23128133-23128196)
chr6 (79-169)||(15508034-15508124)
chr6 (79-169)||(15990052-15990142)
chr6 (79-169)||(30341370-30341460)
chr6 (83-173)||(28536494-28536582)
chr6 (79-173)||(31953036-31953130)
chr6 (101-169)||(4231570-4231638)
chr6 (80-155)||(946377-946452)
[»] chr4 (31 HSPs)
chr4 (79-173)||(11511468-11511562)
chr4 (79-173)||(41236347-41236441)
chr4 (79-173)||(48183055-48183149)
chr4 (79-173)||(50052434-50052528)
chr4 (79-173)||(54473539-54473633)
chr4 (79-173)||(480453-480547)
chr4 (79-173)||(6034044-6034138)
chr4 (79-173)||(29239886-29239980)
chr4 (79-173)||(42044373-42044467)
chr4 (79-173)||(3481654-3481748)
chr4 (79-173)||(29234251-29234345)
chr4 (79-173)||(23608235-23608329)
chr4 (79-173)||(24995113-24995207)
chr4 (79-172)||(50526178-50526271)
chr4 (79-173)||(31910192-31910286)
chr4 (79-169)||(19670726-19670816)
chr4 (84-171)||(53352574-53352660)
chr4 (79-173)||(29977885-29977979)
chr4 (123-173)||(41823926-41823976)
chr4 (79-173)||(48647732-48647826)
chr4 (89-173)||(28480274-28480358)
chr4 (89-173)||(28481149-28481233)
chr4 (89-173)||(28482024-28482108)
chr4 (79-146)||(40574779-40574846)
chr4 (79-144)||(55475191-55475256)
chr4 (97-169)||(17983753-17983825)
chr4 (79-169)||(47986208-47986298)
chr4 (79-169)||(50813902-50813992)
chr4 (79-144)||(55079749-55079814)
chr4 (79-169)||(32766958-32767048)
chr4 (79-144)||(29547994-29548059)
[»] scaffold0237 (1 HSPs)
scaffold0237 (79-173)||(4029-4123)
[»] scaffold1268 (1 HSPs)
scaffold1268 (79-173)||(935-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (79-173)||(935-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (79-173)||(10115-10209)
[»] scaffold0110 (1 HSPs)
scaffold0110 (91-169)||(8873-8951)
[»] scaffold0316 (1 HSPs)
scaffold0316 (128-173)||(17103-17148)
[»] scaffold0018 (1 HSPs)
scaffold0018 (95-168)||(152514-152587)


Alignment Details
Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 504221 - 504127
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 14547922 - 14548016
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14547922 gagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 14548016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 12831047 - 12831141
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 12831141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 15197333 - 15197427
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 15197427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 23122697 - 23122603
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||| || |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 23122603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 34012396 - 34012302
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| | |||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 34012302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 37038479 - 37038573
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| | |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 37038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 40424043 - 40423949
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||| |||||||||| |||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 40423949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 1180040 - 1179946
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||||| |||||  |||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcaca 1179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 5957831 - 5957924
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||||| |||||||||  ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 171
Target Start/End: Complemental strand, 44507187 - 44507095
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 171  Q
    ||||||||| |||||||||||||||||| | |||||||  ||| |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagca 44507095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 10284731 - 10284637
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||||||||| ||  ||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcaca 10284637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 15048281 - 15048188
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacac-cacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15048188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 173
Target Start/End: Complemental strand, 8841513 - 8841438
Alignment:
Q  98 cccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 10621182 - 10621093
Alignment:
Q  84 atgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| ||||||||| |||||||| | |||||||| |||||||| |||||||||||||||||||||| ||| | || ||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcaca 10621093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 43414681 - 43414587
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||| | |||| ||||| |||||||| ||||||||||||| |||||| ||||| |||| ||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 9122196 - 9122279
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||||| |||||||||||||||||| ||||||||||          ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacacc----------cacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 9122279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 16383377 - 16383467
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16383467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 17443825 - 17443914
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaa 168  Q
    |||| |||| ||||||||| ||||||||  ||||||||   || |||||||||||||||||||||| ||||||| ||||||||| |||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 4854963 - 4854869
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| |||||||| |||||||||| ||| ||||  ||| |||||||||| | || | ||| ||||||| |||||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcaca 4854869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 34307216 - 34307306
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  || ||||||||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaag 34307306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggacccc 162  Q
    |||| |||| |||| |||||||||||||  ||||||||   ||||||  ||||||||||||| ||| |||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 24307893 - 24307803
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| |||||||| |  ||||||| ||||||||||||||| | || | ||  |||||||||||||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaag 24307803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgaca 144  Q
    |||| |||| ||||| |||||||||||| |||||||||| |||||||  |||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 24307629 - 24307692
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctga 142  Q
    |||| |||| ||||| |||||||||||| |||||||| |  ||||||| |||||||||||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 15259029 - 15258935
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||| || ||||| | |||||||| |  | ||||  |||| |||||||||||| || ||||||||||||| |||||||||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcaca 15258935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 42221515 - 42221609
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||| ||| ||||||||  |||||||    | ||||| ||||||||||||||||||||| |||  ||||||||  |||||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcaca 42221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 36733042 - 36732948
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcaca 36732948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 18520981 - 18520890
Alignment:
Q  82 taatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 13811652 - 13811746
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| || |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13811652 gagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13811746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 2740274 - 2740368
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 2740368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 40145407 - 40145501
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 40145501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 14831814 - 14831908
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||| ||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 14831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 33149738 - 33149644
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| | |||||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcaca 33149644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 35785199 - 35785293
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcaca 35785293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 42414402 - 42414308
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||  ||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 35943992 - 35943898
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcaca 35943898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 28177775 - 28177869
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 28177869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 6679698 - 6679792
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacaca 6679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 15409710 - 15409616
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| ||||||||  |||||||   |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 41470516 - 41470425
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagc 170  Q
    ||||||| | ||||||||||| |||||| |||||||| | ||| | | ||| | ||||||||||||||||||||||||||||||||||||||    
T  41470516 gagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 3921365 - 3921275
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 3921275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 26720516 - 26720610
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||||||| ||| ||||  ||| ||||||||||||||| | ||| |||| ||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26720610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 26990265 - 26990359
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||||||| ||| ||||  ||| ||||||||||||||| | ||| |||| ||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcaca 26990359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 31009032 - 31009082
Alignment:
Q  123 acactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  31009032 acacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 31009082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaat 138  Q
    |||||||| |||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 31132393 - 31132436
Alignment:
Q  128 cacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 171  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  31132393 cacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 2252268 - 2252178
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| ||| |||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2252178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 20073616 - 20073522
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| | ||||||| | |||| |  ||||||||| ||||||||||||| ||||||||  |||||   ||||||||||| |||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcaca 20073522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 21370048 - 21370098
Alignment:
Q  123 acactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| ||| ||||||||||||| || |||||||||||||||||||| ||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacaca 21370098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 33825424 - 33825356
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgt 147  Q
    |||||||||  ||||||||  ||||||| |||||||||   ||||||| |||| |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgt 33825356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 5e-37; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 53982011 - 53982105
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 53982105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 33644200 - 33644294
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 33644294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 49607414 - 49607508
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 49607508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 54868995 - 54868901
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 54868901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 52629305 - 52629394
Alignment:
Q  84 atgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 52629394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 8076393 - 8076487
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||| |||||||||||| ||| |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 8076487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 17470405 - 17470499
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||| |||||| |||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 17470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 27714991 - 27714897
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||| |||||| | |||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 31456690 - 31456783
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||||| |||||||||||| ||||  |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 11095453 - 11095377
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgt 155  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 26141632 - 26141538
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||||||| ||| |||| |||||||||||||||||||| ||||| |||||||| ||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcaca 26141538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 48587187 - 48587101
Alignment:
Q  83 aatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    ||||| ||||||| |||||||||| |||||||||| ||||||||  ||| |||||||||||||||||||||||||| ||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaag 48587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 173
Target Start/End: Original strand, 26754706 - 26754789
Alignment:
Q  90 catagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||||||||||| |||||||||| || ||||  ||||||||||||||||| || ||||| |||||||||||||||||||    
T  26754706 catagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 26754789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 33118951 - 33118872
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtgga 158  Q
    |||| |||| ||||||||||||||||||  ||||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtgga 33118872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 36707524 - 36707439
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgc 164  Q
    ||||||||| ||||||| ||||||||||  ||||||||| |||||||  ||||||||||||||||||||||| ||||||| |||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 20765015 - 20764921
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||||||||||||| |||||||| | |||||||  ||| |||| |||||||||||||||||||| | ||| ||||||||| |||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcaca 20764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 35536626 - 35536720
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| ||||| || ||||||||||||||||||| |||| |||||| |||||||| |||| |||||||   ||||||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcaca 35536720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 41189864 - 41189770
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||| ||| |||||||| |||||||| |||||||||| |||| |||||| |||||||| | ||| |||||||||||||||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcaca 41189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 11907371 - 11907465
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||||||||||||  ||||||||   |  |||||||||||||||||||||| || ||||  |||||||||||||||||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcaca 11907465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 14623939 - 14623845
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| |||||||| ||||||||||  ||||||| |||| |||||||||||| ||  ||| ||||||| | ||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcaca 14623845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 24700054 - 24699972
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccc 161  Q
    ||||||||| ||||||||| |||||| | |||||||||| |||||||| |||| ||||||||| ||||| | |||||||||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccc 24699972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 30801829 - 30801739
Alignment:
Q  83 aatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||| ||||||||||||||||||   |||||||| ||||| || ||||||||||| ||||| |||||||  |||||||| ||||||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcaca 30801739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 11348022 - 11347928
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| ||||||||  ||||||| | |||||||  |||||||||||||||||||| | ||| ||||||| ||| |||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcaca 11347928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 51419460 - 51419366
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||| |  ||||||| | ||| |||| |||||||||||||||||||| | ||| | |||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcaca 51419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 13898154 - 13898061
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||||| | ||| ||| |||||||| ||||||||||  ||||||| |||| |||||||||||||||  ||| ||||||| | ||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcaca 13898061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 9562999 - 9563093
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||| ||||| |||| |  ||||||| | |||||||  || | |||||||||||||||||||||||||| || |||||| ||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacaca 9563093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 41080709 - 41080790
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccc 161  Q
    ||||||||| ||||||||| |||||| |||||| ||||| |||||||| ||| ||||||||||| | || |||| ||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc 41080790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 47531865 - 47531959
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||| | |||||||||| ||| |||  ||||||| |||||||||||| | ||  || ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcaca 47531959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 45058652 - 45058563
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| |||| |||||||||||| ||   ||  |||||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacacc-cttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaag 45058563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 36331407 - 36331339
Alignment:
Q  101 ttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||||| ||||| ||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 36331339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 2581915 - 2582009
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 2582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 48716382 - 48716288
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 9474976 - 9474882
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacaca 9474882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 3000319 - 3000413
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 3000413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 8346488 - 8346394
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||| |||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 27564835 - 27564741
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 27564741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 38632421 - 38632327
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 44548473 - 44548382
Alignment:
Q  82 taatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| ||||||||| | |||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 44548382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 38595154 - 38595248
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||| ||||| |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 47452420 - 47452326
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| | |||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcaca 47452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 51898783 - 51898689
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| | |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 51898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 50630458 - 50630552
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||| |||||||||| |||||||| | ||||  || ||||||||||||||||||||||||||||||||||||||||||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 32813247 - 32813341
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||||||| ||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcaca 32813341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 43132 - 43226
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||  ||||||   ||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcaca 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 41758805 - 41758899
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||| |||  | |||||||||| |||||||  |||||||||||||||||||||||||| |||||||||||||| ||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacaca 41758899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 11152476 - 11152385
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 172  Q
    |||||||| ||||||||||| |||||| |||||||||| || ||||  ||||||||||||||||||||||||| || ||||||||||||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 37649198 - 37649292
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| | |||||| |||||||||  |||||||| |||||||||||||||||||| |||||||| |  |||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 13414791 - 13414855
Alignment:
Q  109 caatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 13414855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 26274435 - 26274522
Alignment:
Q  82 taatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||||| ||||||||||||||| || |||||||| |||||||||  |||| ||||||||||||| |||||||||||| || |||||||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 45044640 - 45044566
Alignment:
Q  99 ccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||||| ||||||||||||||||||| || |||||||||||||| |||| ||| |||||||||||||| ||||    
T  45044640 ccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacaca 45044566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 5959100 - 5959010
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| ||||||||| || ||||||||||  ||||||| ||||||||||||||||| || ||||  |||||||||||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 5959010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 49811615 - 49811533
Alignment:
Q  91 atagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||| ||||||||  |||||||||||||||||  |||||||||||||||||||||| ||  | ||| |||||||||||||    
T  49811615 atagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcaca 49811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 50591100 - 50591010
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 50591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 41608593 - 41608503
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| ||| |||||||| ||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||| |||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaag 41608503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 23597191 - 23597097
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| | |||||| |||||||||  ||||| || |||| ||||||||||||||| | ||||| ||||  |||||| ||||    
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacaca 23597097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 173
Target Start/End: Original strand, 26440746 - 26440828
Alignment:
Q  91 atagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||| |||||| |  ||||||||| ||| |||| |||||||||||||||||||| | ||| |||| |||||| |||||||    
T  26440746 atagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcaca 26440828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 44453984 - 44454073
Alignment:
Q  84 atgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| ||||||||||| ||| || |||||||| |  |||| || ||||||||||||||||| || || ||||||| ||| ||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 48489349 - 48489394
Alignment:
Q  128 cacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||    
T  48489349 cacacaaaaatctgacatgtggtcacgtggatcccgcacaagcaca 48489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 44334221 - 44334176
Alignment:
Q  128 cacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||||||| ||||||||||||||| ||||||| |||||| ||||    
T  44334221 cacacaaaaacctgacacgtagtcacatggacccagcacaaacaca 44334176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 28863458 - 28863549
Alignment:
Q  82 taatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 28863549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 9058480 - 9058574
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 10249482 - 10249388
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 10249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 32505748 - 32505654
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32505654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 33436200 - 33436106
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 7465835 - 7465741
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 7465741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 13438343 - 13438437
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||||||  ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 13438437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 17473020 - 17473114
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 17473114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 40701478 - 40701572
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcaca 40701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 5574588 - 5574494
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||| ||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcaca 5574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 28381755 - 28381661
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| || ||||| |||||||||||||||||||||||||| ||||| |||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcaca 28381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 30915463 - 30915557
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||| | |||| ||||||||||||||||||||||||||||||| |||||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 19930917 - 19930826
Alignment:
Q  82 taatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| |||||||||||||||||| |||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacaca 19930826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 27864704 - 27864798
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||| || |||||||||| |||||||  ||||||||||||||||||||| |||||||||||||||| |||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcaca 27864798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 4060685 - 4060779
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||||||  ||||||||| |||||||  ||||||||||||||||||||||| ||||||| |||||| |||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4060779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 20700815 - 20700909
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| ||||| || |||||||||| |||||| |  ||||||||||||||||||||||||||||||||||||| |||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 40614002 - 40613908
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||||||| |||||||| |||||||||||||||||||| | ||| |||||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 40613908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 38882913 - 38882831
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggacccc 162  Q
    ||||||||| |||||||||||||||||| |||||| ||| |||||||  |||||||||||||||||||||||||||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 42257193 - 42257287
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| | |||||| |||||||| |||||||||| |||| ||||||||||||||| | ||| |||||||||||||||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 2533124 - 2533217
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| ||||| || |||||||| | |||||||| |||||||||||||||||||||| ||| | |||||||||||||||||    
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgacac-cacacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 26891604 - 26891510
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| |||||| ||||||||||| ||||||||||  | ||||| ||||||||||||||||| || |||||||||||| || |||||||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcaca 26891510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 38273242 - 38273148
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| |||||||||  ||||| | |||||||||| ||| |||| |||||||||||||||||||||| ||| |||||||||||| ||||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcaca 38273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 33436211 - 33436279
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgt 147  Q
    ||||||||| ||||||||| |||||| | |||||||||| |||||||| |||| |||||||||||||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgt 33436279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 17820104 - 17820010
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |  ||||| ||||||||||  ||||||| ||||||||||||||||| || || ||||||||||| ||||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacaca 17820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 41575138 - 41575220
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggacccc 162  Q
    |||||||| ||||||||| |||||| | | |||||||| ||||||| |||||||||||| ||||| || |||| |||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccc 41575220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 43490121 - 43490211
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| ||||||||||||  |||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 3439992 - 3440073
Alignment:
Q  92 tagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||||||||| |||||||||   | ||||| ||||||||||||| ||| ||  | ||||||||||||||||||||||    
T  3439992 tagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcaca 3440073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 2997569 - 2997497
Alignment:
Q  97 acccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 2997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 3737986 - 3738037
Alignment:
Q  122 gacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||| ||||||||||||||||| || |||| ||||||||||||||||||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcaca 3738037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 38732354 - 38732444
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| ||||||||| ||  ||||||| |  ||||||| ||||||||||||||||| || ||||  |||||||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaag 38732444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 36168836 - 36168928
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 171  Q
    |||| |||| ||||||||| |||||| |  ||||||| | ||| || | ||||||||||| |||||||| | ||| |||||||||||||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagca 36168928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 45097835 - 45097745
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| ||| |||||||| |||||||| |  ||||||| || |||||||||||||| || | ||  |||||||||||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaag 45097745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 7389389 - 7389483
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 7389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 8080483 - 8080389
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 8080389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 19329842 - 19329936
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcaca 19329936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 36362013 - 36361919
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36361919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 38267040 - 38267134
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||| ||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 3783998 - 3784089
Alignment:
Q  82 taatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| |||||||||||||||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 3784089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 3434562 - 3434656
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| |||||||| |||||||||| |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcaca 3434656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 4999614 - 4999520
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||| | |||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacaca 4999520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 35137533 - 35137627
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| | |||||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 36362026 - 36362120
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| | |||||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcaca 36362120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 38837217 - 38837311
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| ||  ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38837311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 19436287 - 19436193
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| ||||||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcaca 19436193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 40957707 - 40957801
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||| ||||||| |||||||||  ||||| || ||||||||||||||||||||||||||||||| |||| |||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcaca 40957801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 21234401 - 21234495
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| ||||||||  ||||||||| |||||||||||||||||||| |||||||||| ||| || ||||||||||||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcaca 21234495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 173
Target Start/End: Original strand, 3694370 - 3694461
Alignment:
Q  82 taatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| | ||| ||||||||||||  ||||||||| ||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcaca 3694461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||| ||||| ||| |||| |||||||||||||||||||| | ||| |||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 32951592 - 32951499
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||||| |||||||||| ||||| |  ||||||| | ||| |||  ||||||||||||| ||||||||||||||||||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 32951499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 8238212 - 8238303
Alignment:
Q  79 gagtaatgagacatagacaccct-taggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| ||||||| ||||| |||||||||| |||||||| ||||||||||||||||| |||||||  |||||||||||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaag 8238303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 35522881 - 35522970
Alignment:
Q  84 atgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| ||||||||| ||||| || |||||||||||||| |||| |||||||||||||||||||| | ||  |||| ||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcaca 35522970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 36208173 - 36208267
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| |||||||||||||||||| | ||||||    ||||||| |||||||||| |||||| || ||||||||||||| |||||||||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcaca 36208267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 38044197 - 38044287
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||  ||||||||||||||||| |||| ||  |||||||||||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaag 38044287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 7727906 - 7727996
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| | ||||||||  |||||| ||||| |||||||||||| || ||||  |||||||||||||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaag 7727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 10343663 - 10343597
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacac 145  Q
    ||||||||| |||||||||||||||||| | |||||||   ||||||| ||||||||||||||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 22343361 - 22343451
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||| ||   ||  |||||||||||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaag 22343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 39256023 - 39255934
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||||||| |||||||| ||||||||||| |||| || || ||||||||||||||||| | ||||||||| || ||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaag 39255934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 41915741 - 41915831
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  |||||||  |||||||||||||||| || | ||  |||||||||||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 171
Target Start/End: Complemental strand, 46033901 - 46033809
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 171  Q
    |||| |||| ||||||| |  ||||||| |||||||||| ||| |||| |||| ||||||||||||||| ||||| || || |||||||||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagca 46033809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 11044188 - 11044268
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    ||||||||| |||||||||||||||||| |||||||| | |||||||| |          |||||||||||||||||||||||||||||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaag 11044268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 40846213 - 40846124
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaa 168  Q
    |||| |||| ||||| ||| |||||||| ||||||||||  ||||||  ||||||||||||| ||| ||||| |  ||||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaa 40846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 41423682 - 41423774
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 171  Q
    |||| |||| ||||||||| | |||| | | ||||||||  |||||||| |||||||||||||||| || ||||||| || |||| |||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagca 41423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 16374875 - 16374830
Alignment:
Q  128 cacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||||||||||||||||| |||||||||| | | ||||||||||    
T  16374875 cacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 32564526 - 32564461
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgaca 144  Q
    |||| |||| ||||| |||  ||||||| ||||||||||  ||||||| |||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgaca 32564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 6209565 - 6209471
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcaca 6209471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 32869678 - 32869772
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| || |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 32869772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 22880755 - 22880664
Alignment:
Q  82 taatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcaca 22880664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 17598554 - 17598648
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||| | |||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 11427616 - 11427712
Alignment:
Q  79 gagtaatgagacatagacaccct--taggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||  ||||| |||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcaca 11427712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 29857827 - 29857921
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||| |||| | |||||||||| ||| |||| ||||||||||||||||||||||| ||||||| |||||| |||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 29857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 31109488 - 31109414
Alignment:
Q  91 atagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgca 165  Q
    |||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||| |||||||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgca 31109414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 31976248 - 31976342
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||| ||| ||| |||| |||||||||||||||||||| ||||| || ||||||||||||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcaca 31976342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 15832577 - 15832666
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaa 168  Q
    ||||||||| ||||||||||| ||||||  ||||| | |||||||||| ||||||||||| ||||||||||||||||||| || ||||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 31110859 - 31110767
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| |||||||| |||||||||| |||||||||  |||||||||||||||||||  ||| ||||||| |||||||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacact--cacaaaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 23128196 - 23128133
Alignment:
Q  110 aatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||||| | |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcaca 23128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 15508124 - 15508034
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15508034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 15990142 - 15990052
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 15990052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 30341460 - 30341370
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 30341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 28536582 - 28536494
Alignment:
Q  83 aatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||| ||||| ||| |||||||| |||||||| |  ||||||| |||||||||||||||||||  |||| ||||||||| ||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcaca 28536494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 31953130 - 31953036
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| | ||||||| |||||||| ||||||||||  ||||||| |||| |||||||||||| ||  ||| ||||||| | ||||| ||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacaca 31953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 4231570 - 4231638
Alignment:
Q  101 ttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||||| ||||||||||  ||| ||| |||||||||||||||||||| | ||  |||||||||||||||    
T  4231570 ttaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaag 4231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 946377 - 946452
Alignment:
Q  80 agtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgt 155  Q
    ||||| || ||||||||| ||||||||   |||||||| ||||||||  || |||||||||||||| |||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgt 946452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 11511562 - 11511468
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 11511468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 41236347 - 41236441
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 41236441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 48183149 - 48183055
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||| || |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 50052528 - 50052434
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 54473633 - 54473539
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 480547 - 480453
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 6034044 - 6034138
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcaca 6034138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 29239886 - 29239980
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcaca 29239980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 42044467 - 42044373
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||||| |||||||| | ||  |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 3481654 - 3481748
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||| |||||| |||||||||  |||||||| |||||||||||||||||| |||||||||||||||| ||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcaca 3481748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 29234345 - 29234251
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| |||||||||||||||| | |||||||||| ||||| ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 29234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 23608235 - 23608329
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| | |||||||||||||| |  |||||||||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcaca 23608329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 24995207 - 24995113
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| | || ||||||||||| | |||||||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcaca 24995113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 172
Target Start/End: Complemental strand, 50526271 - 50526178
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcac 172  Q
    ||||||||| ||||||||| | |||||| |||||||||| |||||||| |||||||||||||||||||| ||||||||||  ||||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 31910192 - 31910286
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||| ||||||||  ||||||||  |||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcaca 31910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 19670816 - 19670726
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||| || | ||  |||||||||||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 53352660 - 53352574
Alignment:
Q  84 atgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 171  Q
    |||| |||||||||||||||||| ||||||||   ||| ||||  |||||||||||||||||||||| | ||||||||||||||||||    
T  53352660 atgatacatagacacccttaggt-gcaatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagca 53352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 29977885 - 29977979
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||| | | || ||||| ||||||||||  || |||| |||||||||||||||||||||||||  |||||||| ||||||||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 41823926 - 41823976
Alignment:
Q  123 acactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcaca 41823976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 48647826 - 48647732
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||| ||| ||||||||| |||||||||  || |||| |||| |||||||| |||||| ||||||||||| |||||||||||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcaca 48647732  T

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Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 28480358 - 28480274
Alignment:
Q  89 acatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||  ||||||||   || |||||||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28480358 acatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28480274  T

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Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 28481233 - 28481149
Alignment:
Q  89 acatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||  ||||||||   || |||||||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28481233 acatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28481149  T

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Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 28482108 - 28482024
Alignment:
Q  89 acatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||  ||||||||   || |||||||||||||||||||||| ||||||| ||||||||| ||||| ||||    
T  28482108 acatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacaca 28482024  T

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Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacg 146  Q
    |||| |||| ||||||||| |||||||| | |||||||| |||||||| |||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

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Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 55475191 - 55475256
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgaca 144  Q
    |||| |||| ||||| ||| |||||||| |||||||||| |||||||| |||||||||||||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

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Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 17983825 - 17983753
Alignment:
Q  97 acccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||||| || | ||  |||||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 17983753  T

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Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 47986208 - 47986298
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||||||||||| |||||||| |  ||||||  ||||||||||||||||| || | ||  |||||||||||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaag 47986298  T

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Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 50813992 - 50813902
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||| ||||||| | ||||||||  ||||||| ||||||||||||||||| || ||||  || ||||||||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T

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Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 55079814 - 55079749
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgaca 144  Q
    |||| |||| ||||| |||||||||||| ||||||||||  ||||||| || ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgaca 55079749  T

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Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Original strand, 32766958 - 32767048
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    |||| |||| ||||| |||| ||||||| ||||||||||  ||||||| || |||||||||||||| || | ||  ||||||| |||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaag 32767048  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 29548059 - 29547994
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgaca 144  Q
    |||| |||| ||||| ||| |||||||| |||||||| |  ||||||| |||||||||||||||||    
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgaca 29547994  T

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Target: scaffold0237 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 4029 - 4123
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||||| |||| | |||||||||| ||| |||| ||||||||||||||||||||||| ||||||| |||||| |||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcaca 4123  T

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Target: scaffold1268 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| | |||||| |||||||||| ||| |||  |||||||||| |||||||||||||||||| | ||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

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Target: scaffold1267 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 1029 - 935
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||| ||||||||| | |||||| |||||||||| ||| |||  |||||||||| |||||||||||||||||| | ||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcaca 935  T

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Target: scaffold0321 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Complemental strand, 10209 - 10115
Alignment:
Q  79 gagtaatgagacatagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    |||| |||| ||||||||||| |||||| |||||||| | |||||||  |||| |||||||||||||||||||||||||||| || |||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 8951 - 8873
Alignment:
Q  91 atagacacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaag 169  Q
    ||||||| ||||| ||  |||||||| ||||||||   |||||||||| |||||| |||||||||||||||| ||||||    
T  8951 atagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaag 8873  T

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Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 17103 - 17148
Alignment:
Q  128 cacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 173  Q
    ||||||||||||||||| || ||||| |||||||||||||||||||    
T  17103 cacacaaaaatctgacatgtggtcacatggaccccgcacaagcaca 17148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 152514 - 152587
Alignment:
Q  95 acacccttaggtagcaatacaccatttgacactcacacaaaaatctgacacgtagtcacgtggaccccgcacaa 168  Q
    |||||||| ||| ||||||||||  ||||||| ||||||||||||||||| || ||||  |||| |||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaa 152587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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