View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16229_low_1 (Length: 1058)
Name: NF16229_low_1
Description: NF16229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16229_low_1 |
 | |
|
| [»] scaffold0200 (1 HSPs) |
| | |
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Alignment Details
Target: chr4 (Bit Score: 742; Significance: 0; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 742; E-Value: 0
Query Start/End: Original strand, 251 - 1051
Target Start/End: Complemental strand, 1655830 - 1655036
Alignment:
| Q |
251 |
gtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatata |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655830 |
gtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatata |
1655731 |
T |
|
| Q |
351 |
ccaaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaa |
450 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655730 |
ccaaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaa |
1655631 |
T |
|
| Q |
451 |
acggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttaa |
550 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655630 |
acggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttag |
1655531 |
T |
|
| Q |
551 |
tgttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgagg |
650 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655530 |
tgttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggctataaaagcaccatcttttagtttgggaattgactcagattctgagg |
1655431 |
T |
|
| Q |
651 |
atctgctgaatcgaattgttgaagactcactagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttga |
750 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655430 |
atctgctgaatcgaattgttgaagactcgctagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttga |
1655331 |
T |
|
| Q |
751 |
aggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaat |
850 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655330 |
aggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaat |
1655231 |
T |
|
| Q |
851 |
ccagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaaccatg |
950 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1655230 |
ccagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaacc--- |
1655134 |
T |
|
| Q |
951 |
acaatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgatattcttcgac |
1050 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
1655133 |
---atgaaaaggatgaggttcagaaaaatgaaaagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgattttgttcgac |
1655037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 737; E-Value: 0
Query Start/End: Original strand, 252 - 1051
Target Start/End: Complemental strand, 45223803 - 45223010
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223803 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
45223704 |
T |
|
| Q |
352 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
451 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223703 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
45223604 |
T |
|
| Q |
452 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttaat |
551 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
45223603 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttagt |
45223504 |
T |
|
| Q |
552 |
gttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgagga |
651 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223503 |
gttccttctattcttctgcataattcaagaaaatggttttcaagaaaatggctataaaagcaccatcttttagtttgggaattgactcagattctgagga |
45223404 |
T |
|
| Q |
652 |
tctgctgaatcgaattgttgaagactcactagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
751 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223403 |
tctgctgaatcgaattgttgaagactcgctagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
45223304 |
T |
|
| Q |
752 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
851 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223303 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
45223204 |
T |
|
| Q |
852 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaaccatga |
951 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45223203 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaacc---- |
45223108 |
T |
|
| Q |
952 |
caatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgatattcttcgaca |
1051 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
45223107 |
--atgaaaaggatgaggttcagaaaaatgaaaagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgattttgttcgaca |
45223010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 734; E-Value: 0
Query Start/End: Original strand, 243 - 1051
Target Start/End: Original strand, 9128364 - 9129166
Alignment:
| Q |
243 |
aaaatatagtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaagg |
342 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128364 |
aaaacataatactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaagg |
9128463 |
T |
|
| Q |
343 |
ctaatataccaaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaa |
442 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128464 |
ctaatataccaaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaa |
9128563 |
T |
|
| Q |
443 |
aaactgaaacggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagag |
542 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128564 |
aaactgaaacggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagag |
9128663 |
T |
|
| Q |
543 |
aaacttaatgttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcaga |
642 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128664 |
aaacttagtgttccttctattcttctgcataattcaagaaaatggttttcaagaaaatggctataaaagcaccatcttttagtttgggaattgactcaga |
9128763 |
T |
|
| Q |
643 |
ttctgaggatctgctgaatcgaattgttgaagactcactagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccat |
742 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128764 |
ttctgaggatctgctgaatcgaattgttgaagactcgctagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccat |
9128863 |
T |
|
| Q |
743 |
catgttgaaggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaag |
842 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128864 |
catgttgaaggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaag |
9128963 |
T |
|
| Q |
843 |
ttcttaatccagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggc |
942 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9128964 |
ttcttaatccagttgaaggtgctgctgaagctgaacttaatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggc |
9129063 |
T |
|
| Q |
943 |
aaaccatgacaatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgatat |
1042 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9129064 |
aaacc------atgaaaaggatgaggttcagaaaaatgaaaagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgattt |
9129157 |
T |
|
| Q |
1043 |
tcttcgaca |
1051 |
Q |
| |
|
| ||||||| |
|
|
| T |
9129158 |
tgttcgaca |
9129166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 731; E-Value: 0
Query Start/End: Original strand, 250 - 1051
Target Start/End: Complemental strand, 37153488 - 37152693
Alignment:
| Q |
250 |
agtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatat |
349 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37153488 |
agtactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagtaaaattgacttttttcatcatatttaaggctaatat |
37153389 |
T |
|
| Q |
350 |
accaaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactga |
449 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37153388 |
accaaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactga |
37153289 |
T |
|
| Q |
450 |
aacggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaactta |
549 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37153288 |
aacggctctctatactcctctccctctatagtaactccacgaagcccaaaccaatgttttcttccacttattataaaaaggctgttcagagagaaactta |
37153189 |
T |
|
| Q |
550 |
atgttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgag |
649 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37153188 |
gtgttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggctataaaagcaccatcttttagtttgggaattgactcagattctgag |
37153089 |
T |
|
| Q |
650 |
gatctgctgaatcgaattgttgaagactcactagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttg |
749 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37153088 |
gatctgctgaatcgaattgttgaagactcgctagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttg |
37152989 |
T |
|
| Q |
750 |
aaggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaa |
849 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37152988 |
aaggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaaactgatgatgttaatgaagttcttaa |
37152889 |
T |
|
| Q |
850 |
tccagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaaccat |
949 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37152888 |
tccagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaacc-- |
37152791 |
T |
|
| Q |
950 |
gacaatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgatattcttcga |
1049 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
37152790 |
----atgaaaaggatgaggttcagaaaaatgaaaagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgattttgttcga |
37152695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 769 - 957
Target Start/End: Complemental strand, 26651114 - 26650926
Alignment:
| Q |
769 |
caaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatccagt-tgaaggtgctgc |
867 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||| |||||| ||||| ||||| ||||||| ||||||||||| ||| ||| | |||||||| ||| |
|
|
| T |
26651114 |
caaacacaactttgatctcaatgaaattcctaatgaaggtgaagatgctgttgaagttgatgatattaatgaagttactaa-ccactctgaaggtgttgc |
26651016 |
T |
|
| Q |
868 |
tgaagctgaacttgatttagatctaaacaaaatgcccaacg------tgaatgttgaaaatgagattgaagaggagttggcaaaccatgacaatga |
957 |
Q |
| |
|
||||| || ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26651015 |
tgaag------gtggtttggatctaaacaaattgcccaacgacatgctgaatgttgaaaatgagattgaagaggaggtggcaaaccatgacaatga |
26650926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 920 - 1014
Target Start/End: Complemental strand, 26650930 - 26650836
Alignment:
| Q |
920 |
aatgagattgaagaggagttggcaaaccatgacaatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaa |
1014 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | | |||| ||||||||||||||||||||| || || ||||||||||||| |
|
|
| T |
26650930 |
aatgagattgaagaggagttggcaaaccatgacaatgaagaggaggggattcataaaaatgaagagttaaagaaagggattgatgatatgctgaa |
26650836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 593 - 735
Target Start/End: Complemental strand, 26651257 - 26651115
Alignment:
| Q |
593 |
aagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgaggatctgctgaatcgaattgttgaagactcactagagaaagatg |
692 |
Q |
| |
|
|||||||||||| | ||| |||||| |||||||||||||| || ||||||||||||||||| | ||||| |||||||||||||| | ||||||||||| |
|
|
| T |
26651257 |
aagaaaatggttattgaaggaccatcatttagtttgggaatcgaatcagattctgaggatctattaaatcgcattgttgaagactcgccagagaaagatg |
26651158 |
T |
|
| Q |
693 |
gggaggttgaacagattcaaaatgttgagggtgaagtgaattc |
735 |
Q |
| |
|
|||||| || ||| ||||| |||||||| ||||||||||||| |
|
|
| T |
26651157 |
gggaggctggacacgttcaagatgttgagagtgaagtgaattc |
26651115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 252 - 382
Target Start/End: Original strand, 48078771 - 48078901
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
351 |
Q |
| |
|
|||| |||| ||||| |||||| ||||||||||||| |||||| |||| |||||||||||||||||||| ||||||| |||||||||||| || ||||| |
|
|
| T |
48078771 |
tacttcctctgtatcaaaatattagcaaaattcaacaatcttaactgtgtcaaaatataagcaaaattgatttttttcctcatatttaaggatagtatac |
48078870 |
T |
|
| Q |
352 |
caaaaatgcccttagtttaatactccaattt |
382 |
Q |
| |
|
|||| || ||||| ||||||||||| ||||| |
|
|
| T |
48078871 |
caaatatacccttggtttaatactctaattt |
48078901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 252 - 382
Target Start/End: Complemental strand, 26651605 - 26651475
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
351 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||| |||||||||| || |||| |
|
|
| T |
26651605 |
tactccctccgtgtcaaaatataagcaaaattcaactatcttgactgtaacaaaatataagcaaatttgactttattcctcatatttaaatatagtatat |
26651506 |
T |
|
| Q |
352 |
caaaaatgcccttagtttaatactccaattt |
382 |
Q |
| |
|
|||| |||||||| |||||| ||| ||||| |
|
|
| T |
26651505 |
caaatatgcccttgctttaattctctaattt |
26651475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 39466700 - 39466733
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
39466700 |
tactccctccgtatcaaaatataagcaaaattca |
39466733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 741; Significance: 0; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 741; E-Value: 0
Query Start/End: Original strand, 252 - 1051
Target Start/End: Original strand, 12810562 - 12811355
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12810562 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
12810661 |
T |
|
| Q |
352 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
451 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12810662 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
12810761 |
T |
|
| Q |
452 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttaat |
551 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
12810762 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttagt |
12810861 |
T |
|
| Q |
552 |
gttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgagga |
651 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12810862 |
gttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggctataaaagcaccatcttttagtttgggaattgactcagattctgagga |
12810961 |
T |
|
| Q |
652 |
tctgctgaatcgaattgttgaagactcactagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
751 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12810962 |
tctgctgaatcgaattgttgaagactcgctagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
12811061 |
T |
|
| Q |
752 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
851 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12811062 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
12811161 |
T |
|
| Q |
852 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaaccatga |
951 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12811162 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaacc---- |
12811257 |
T |
|
| Q |
952 |
caatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgatattcttcgaca |
1051 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
12811258 |
--atgaaaaggatgaggttcagaaaaatgaaaagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgattttgttcgaca |
12811355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 252 - 382
Target Start/End: Original strand, 43872868 - 43872998
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
351 |
Q |
| |
|
||||| |||||| || ||||||||||||||||||||||||||| ||| | | |||||||||||| ||||| || ||| | |||||||| |||||||| |
|
|
| T |
43872868 |
tactctctccgtgtcaaaatataagcaaaattcaactatcttagctgtaatagaatataagcaaatttgaccttattccttatatttaaatataatatac |
43872967 |
T |
|
| Q |
352 |
caaaaatgcccttagtttaatactccaattt |
382 |
Q |
| |
|
|||| |||||||| |||||| ||||||||| |
|
|
| T |
43872968 |
caaacatgcccttgctttaattctccaattt |
43872998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 613 - 686
Target Start/End: Original strand, 43873236 - 43873309
Alignment:
| Q |
613 |
accatcttttagtttgggaattgactcagattctgaggatctgctgaatcgaattgttgaagactcactagaga |
686 |
Q |
| |
|
|||||| |||||||||||||| || ||| |||||||||||||| | ||||| ||||||||| |||||| ||||| |
|
|
| T |
43873236 |
accatcatttagtttgggaatcgaatcaaattctgaggatctgttaaatcgcattgttgaaaactcaccagaga |
43873309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 27878838 - 27878871
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
27878838 |
tactccctccgtatcaaaatataagcaaaattca |
27878871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 27878947 - 27878914
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
27878947 |
tactccctccgtatcaaaatataagcaaaattca |
27878914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 741; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 741; E-Value: 0
Query Start/End: Original strand, 252 - 1051
Target Start/End: Complemental strand, 23781757 - 23780964
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781757 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
23781658 |
T |
|
| Q |
352 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
451 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781657 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
23781558 |
T |
|
| Q |
452 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttaat |
551 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
23781557 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttagt |
23781458 |
T |
|
| Q |
552 |
gttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgagga |
651 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781457 |
gttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggctataaaagcaccatcttttagtttgggaattgactcagattctgagga |
23781358 |
T |
|
| Q |
652 |
tctgctgaatcgaattgttgaagactcactagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
751 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781357 |
tctgctgaatcgaattgttgaagactcgctagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
23781258 |
T |
|
| Q |
752 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
851 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781257 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
23781158 |
T |
|
| Q |
852 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaaccatga |
951 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23781157 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaacc---- |
23781062 |
T |
|
| Q |
952 |
caatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgatattcttcgaca |
1051 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
23781061 |
--atgaaaaggatgaggttcagaaaaatgaaaagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgattttgttcgaca |
23780964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 741; E-Value: 0
Query Start/End: Original strand, 252 - 1051
Target Start/End: Original strand, 52635186 - 52635979
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635186 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
52635285 |
T |
|
| Q |
352 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
451 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635286 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
52635385 |
T |
|
| Q |
452 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttaat |
551 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
52635386 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttagt |
52635485 |
T |
|
| Q |
552 |
gttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgagga |
651 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635486 |
gttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggctataaaagcaccatcttttagtttgggaattgactcagattctgagga |
52635585 |
T |
|
| Q |
652 |
tctgctgaatcgaattgttgaagactcactagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
751 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635586 |
tctgctgaatcgaattgttgaagactcgctagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
52635685 |
T |
|
| Q |
752 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
851 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635686 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
52635785 |
T |
|
| Q |
852 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaaccatga |
951 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52635786 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaacc---- |
52635881 |
T |
|
| Q |
952 |
caatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgatattcttcgaca |
1051 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
52635882 |
--atgaaaaggatgaggttcagaaaaatgaaaagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgattttgttcgaca |
52635979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 252 - 382
Target Start/End: Complemental strand, 50746513 - 50746387
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgactt---ttttcatcatatttaaggctaata |
348 |
Q |
| |
|
||||||||| || || ||||||||| ||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||| || || |
|
|
| T |
50746513 |
tactccctctgtgtcaaaatataagtaaaattcaactat-------gtaacaaaatataagcaaaattgactttttttttcctcatatttaaatatagta |
50746421 |
T |
|
| Q |
349 |
taccaaaaatgcccttagtttaatactccaattt |
382 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||| |
|
|
| T |
50746420 |
taccaaatatgcccttgctttaattctccaattt |
50746387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 9135662 - 9135629
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
9135662 |
tactccctccgtatcaaaatataagcaaaattca |
9135629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 733; Significance: 0; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 733; E-Value: 0
Query Start/End: Original strand, 252 - 1051
Target Start/End: Original strand, 3790125 - 3790918
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790125 |
tactccctccgtatcgaaatataagcaaaattcaactatcttacttgtgacaaaatataagcaaaattgacttttttcatcatatttaaggctaatatac |
3790224 |
T |
|
| Q |
352 |
caaaaatgcccttagtttaatactccaatttccatcacaattttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
451 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790225 |
caaaaatgcccttagtttaatactccaatttccatcacagttttccacgcgaatgcaattctccaaaccaggttttaatgaatgtattgaaaaactgaaa |
3790324 |
T |
|
| Q |
452 |
cggctctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttaat |
551 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
3790325 |
cggttctctatactcctctccctctatagtaactccacgaagcccaagccaatgttttcttccacttattataaaaaggctgttcagagagaaacttagt |
3790424 |
T |
|
| Q |
552 |
gttccttctattcttctgcataattcaagaaaatggctttcaagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgagga |
651 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790425 |
gttccttctattcttctgcataattcaagaaaatggttttcaagaaaatggctataaaagcaccatcttttagtttgggaattgactcagattctgagga |
3790524 |
T |
|
| Q |
652 |
tctgctgaatcgaattgttgaagactcactagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
751 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790525 |
tctgctgaatcgaattgttgaagactcgctagagaaagatggggaggttgaacagattcaaaatgttgagggtgaagtgaattctcaccatcatgttgaa |
3790624 |
T |
|
| Q |
752 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
851 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790625 |
ggtggagaaagaagcttcaaacacaactttgatcttaacgaaattcctaatgaaagtgaaggtgctgctgaagctgatgatgttaatgaagttcttaatc |
3790724 |
T |
|
| Q |
852 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaaccatga |
951 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3790725 |
cagttgaaggtgctgctgaagctgaacttgatttagatctaaacaaaatgcccaacgtgaatgttgaaaatgagattgaagaggagttggcaaacc---- |
3790820 |
T |
|
| Q |
952 |
caatgaagaggatgaggttcagaaaaatgaagagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgatattcttcgaca |
1051 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
3790821 |
--atgaaaaggatgaggttcagaaaaatgaaaagttaaagaaatgggttcatgatatgctgaagatttatatagctgggtttccatgattttgttcgaca |
3790918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 29007556 - 29007523
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
29007556 |
tactccctccgtatcaaaatataagcaaaattca |
29007523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 40305008 - 40305041
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
40305008 |
tactccctccgtatcaaaatataagcaaaattca |
40305041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 144; Significance: 4e-75; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 11030721 - 11030872
Alignment:
| Q |
65 |
gagacaacagttcagtgcaaagatcaacaccaaacaagataggttcctaatcaaaatcgtctattcatattaatgtctgcaatgtacccataagtttgga |
164 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11030721 |
gagacaacagttcagtgcaaagatcaacaccaaacaagataggttcctaatcaaaatcgtctactcatattaatgtctgcaatgtacccataagtttgga |
11030820 |
T |
|
| Q |
165 |
gatgaatgaatgatgagtaattgcttaatgaaattggtcaaaccaaggaata |
216 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11030821 |
gatgaatgaatgatgagtagttgcttaatgaaattggtcaaaccaaggaata |
11030872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 593 - 686
Target Start/End: Complemental strand, 3055299 - 3055206
Alignment:
| Q |
593 |
aagaaaatggttgtaaaagcaccatcttttagtttgggaattgactcagattctgaggatctgctgaatcgaattgttgaagactcactagaga |
686 |
Q |
| |
|
|||||||||| | || ||| |||||| |||||||||||||| || ||||||||||||||||| | ||||| |||||||||||||||||||||| |
|
|
| T |
3055299 |
aagaaaatggctatagaaggaccatcatttagtttgggaatcgaatcagattctgaggatctattaaatcgcattgttgaagactcactagaga |
3055206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.0000001; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 285
Target Start/End: Original strand, 28034010 - 28034044
Alignment:
| Q |
251 |
gtactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |
|
|
| T |
28034010 |
gtactccctccgtatcaaaatataagcaaaattca |
28034044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 14897043 - 14897076
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
14897043 |
tactccctccgtatcaaaatataagcaaaattca |
14897076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 285
Target Start/End: Original strand, 8618384 - 8618426
Alignment:
| Q |
243 |
aaaatatagtactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
|||||| |||||||||||||| || |||||||||||||||||| |
|
|
| T |
8618384 |
aaaataaagtactccctccgtttcaaaatataagcaaaattca |
8618426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0200 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0200
Description:
Target: scaffold0200; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 22446 - 22413
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
22446 |
tactccctccgtatcaaaatataagcaaaattca |
22413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 16607498 - 16607465
Alignment:
| Q |
252 |
tactccctccgtatcgaaatataagcaaaattca |
285 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
16607498 |
tactccctccgtatcaaaatataagcaaaattca |
16607465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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