View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16229_low_6 (Length: 250)
Name: NF16229_low_6
Description: NF16229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16229_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 7906036 - 7905806
Alignment:
| Q |
1 |
caaatccacataacacacctcacaatactccacaaatttatttcgataatactcccatatttaccactgaacctgccacaccagatccttccatatcaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7906036 |
caaatccacataacacacctcacaatactccacaaatttatttcgataatactcccatatttaccactgaacctgccacaccagatccttccatatcaac |
7905937 |
T |
|
| Q |
101 |
atctcaaccacatgctcctcttgtttctgcccttactcaggctcgccattccactcgtactcgtacaacaccagctcatcttcaagactttgtttgctca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7905936 |
atctcaaccacatgctcctcttgtttctgcccttactcaggctcgccattccactcgtactcgtacaacaccagctcatcttcaagactttgtttgctca |
7905837 |
T |
|
| Q |
201 |
gctctttcccatctccgcttccttgtcttatc |
232 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |
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| T |
7905836 |
gctc-ttcccatctccgcttccttgtcttatc |
7905806 |
T |
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