View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1622_low_7 (Length: 438)

Name: NF1622_low_7
Description: NF1622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1622_low_7
NF1622_low_7
[»] chr3 (59 HSPs)
chr3 (174-333)||(12917211-12917370)
chr3 (180-333)||(3527068-3527221)
chr3 (161-333)||(25202124-25202295)
chr3 (200-333)||(22841210-22841343)
chr3 (183-332)||(14641463-14641611)
chr3 (194-333)||(45803257-45803395)
chr3 (164-333)||(48043372-48043540)
chr3 (174-332)||(29907628-29907785)
chr3 (174-332)||(29948794-29948951)
chr3 (174-332)||(29997948-29998105)
chr3 (269-333)||(54875474-54875538)
chr3 (174-331)||(24548867-24549016)
chr3 (259-333)||(14442163-14442237)
chr3 (264-333)||(2841501-2841570)
chr3 (264-321)||(6156710-6156767)
chr3 (265-333)||(6159393-6159461)
chr3 (264-332)||(14520435-14520503)
chr3 (174-299)||(21845561-21845682)
chr3 (268-332)||(14152398-14152462)
chr3 (264-332)||(17208513-17208581)
chr3 (269-333)||(17669698-17669762)
chr3 (269-333)||(17684835-17684899)
chr3 (268-333)||(24547188-24547253)
chr3 (281-333)||(50755266-50755318)
chr3 (204-332)||(3160561-3160689)
chr3 (264-332)||(5215636-5215704)
chr3 (265-332)||(15566733-15566800)
chr3 (268-333)||(16050915-16050980)
chr3 (264-317)||(19568203-19568256)
chr3 (264-299)||(13185917-13185952)
chr3 (264-299)||(40808018-40808053)
chr3 (264-299)||(40812855-40812890)
chr3 (264-299)||(44274440-44274475)
chr3 (280-333)||(2247877-2247930)
chr3 (266-299)||(5200240-5200273)
chr3 (183-232)||(10558981-10559030)
chr3 (136-232)||(48631435-48631538)
chr3 (258-326)||(6003181-6003248)
chr3 (183-227)||(6468254-6468298)
chr3 (183-227)||(10380031-10380075)
chr3 (264-299)||(10563730-10563765)
chr3 (268-299)||(15446867-15446898)
chr3 (264-299)||(33565109-33565144)
chr3 (264-299)||(35960923-35960958)
chr3 (259-317)||(9510906-9510964)
chr3 (259-317)||(9518881-9518939)
chr3 (265-299)||(11563747-11563781)
chr3 (269-299)||(17044988-17045018)
chr3 (269-299)||(17047148-17047178)
chr3 (265-299)||(17518869-17518903)
chr3 (265-299)||(17533731-17533765)
chr3 (269-299)||(17541456-17541486)
chr3 (269-299)||(22306583-22306613)
chr3 (183-217)||(46823180-46823214)
chr3 (261-299)||(48631353-48631391)
chr3 (265-299)||(49900752-49900786)
chr3 (268-317)||(24177735-24177784)
chr3 (8-37)||(31530825-31530854)
chr3 (269-297)||(41172371-41172399)
[»] chr8 (50 HSPs)
chr8 (174-333)||(22610172-22610331)
chr8 (174-331)||(20879463-20879619)
chr8 (180-333)||(23884159-23884309)
chr8 (200-333)||(22483926-22484058)
chr8 (200-333)||(22345152-22345286)
chr8 (200-333)||(22356812-22356946)
chr8 (183-332)||(22208258-22208405)
chr8 (264-333)||(21399705-21399774)
chr8 (264-333)||(21794198-21794267)
chr8 (117-331)||(36305988-36306212)
chr8 (103-211)||(36732246-36732353)
chr8 (264-332)||(18816290-18816358)
chr8 (273-333)||(22483774-22483834)
chr8 (115-180)||(36404982-36405047)
chr8 (269-321)||(18834422-18834474)
chr8 (268-332)||(36732411-36732475)
chr8 (269-332)||(21514680-21514743)
chr8 (269-332)||(22258306-22258369)
chr8 (115-180)||(22474897-22474962)
chr8 (268-332)||(4380616-4380680)
chr8 (268-332)||(12577869-12577932)
chr8 (115-202)||(4380463-4380550)
chr8 (259-317)||(22532122-22532180)
chr8 (259-317)||(22536807-22536865)
chr8 (116-180)||(17978263-17978327)
chr8 (259-299)||(20397500-20397540)
chr8 (258-326)||(22708313-22708380)
chr8 (261-332)||(21678838-21678907)
chr8 (265-299)||(20022036-20022070)
chr8 (183-232)||(17611210-17611259)
chr8 (268-317)||(17906848-17906897)
chr8 (280-333)||(18023567-18023620)
chr8 (263-332)||(21676494-21676561)
chr8 (280-333)||(38184923-38184976)
chr8 (268-299)||(5761555-5761586)
chr8 (264-299)||(6101748-6101783)
chr8 (268-299)||(17158962-17158993)
chr8 (268-299)||(19880844-19880875)
chr8 (268-299)||(23479104-23479135)
chr8 (264-299)||(23899982-23900017)
chr8 (268-299)||(26454730-26454761)
chr8 (264-299)||(31722488-31722523)
chr8 (264-299)||(36727033-36727068)
chr8 (264-299)||(45469214-45469249)
chr8 (261-299)||(20517028-20517066)
chr8 (266-332)||(21676590-21676654)
chr8 (183-215)||(18834541-18834573)
chr8 (259-299)||(22317901-22317941)
chr8 (259-299)||(22474778-22474818)
chr8 (259-299)||(36405122-36405162)
[»] chr1 (50 HSPs)
chr1 (174-333)||(34392756-34392915)
chr1 (183-333)||(8306594-8306743)
chr1 (194-333)||(17901719-17901858)
chr1 (174-333)||(35895087-35895246)
chr1 (204-332)||(39061310-39061437)
chr1 (127-332)||(28476579-28476797)
chr1 (265-333)||(45499530-45499598)
chr1 (264-332)||(50544861-50544929)
chr1 (269-332)||(22145666-22145729)
chr1 (265-332)||(38056668-38056735)
chr1 (263-333)||(20588624-20588696)
chr1 (263-333)||(20593162-20593234)
chr1 (266-329)||(635001-635064)
chr1 (101-331)||(12710857-12711101)
chr1 (200-333)||(6834164-6834297)
chr1 (204-289)||(21187968-21188054)
chr1 (115-180)||(24719357-24719422)
chr1 (115-180)||(44892594-44892659)
chr1 (259-303)||(7703140-7703184)
chr1 (272-332)||(24719514-24719573)
chr1 (109-180)||(14792403-14792474)
chr1 (259-321)||(21168933-21168995)
chr1 (259-317)||(24723341-24723399)
chr1 (264-317)||(7051917-7051970)
chr1 (268-333)||(51336467-51336532)
chr1 (268-332)||(8275988-8276052)
chr1 (269-333)||(16401901-16401963)
chr1 (268-333)||(12327742-12327807)
chr1 (115-168)||(18121741-18121794)
chr1 (264-317)||(21239044-21239097)
chr1 (183-227)||(20846338-20846382)
chr1 (113-169)||(21187889-21187945)
chr1 (268-332)||(24007224-24007287)
chr1 (183-227)||(28193561-28193605)
chr1 (264-299)||(4595848-4595883)
chr1 (399-438)||(8306490-8306529)
chr1 (264-299)||(13302924-13302959)
chr1 (268-299)||(29763631-29763662)
chr1 (264-299)||(42913071-42913106)
chr1 (268-299)||(46197744-46197775)
chr1 (259-289)||(7320584-7320614)
chr1 (265-299)||(16058310-16058344)
chr1 (269-299)||(19676733-19676763)
chr1 (258-332)||(20708048-20708121)
chr1 (269-299)||(21046049-21046079)
chr1 (183-217)||(38056589-38056623)
chr1 (259-317)||(51324508-51324566)
chr1 (195-232)||(14237582-14237619)
chr1 (200-299)||(21243688-21243788)
chr1 (195-232)||(46560166-46560203)
[»] chr7 (58 HSPs)
chr7 (161-331)||(38299738-38299908)
chr7 (161-333)||(36300533-36300705)
chr7 (200-333)||(13315012-13315146)
chr7 (200-333)||(13744440-13744574)
chr7 (200-333)||(18570635-18570768)
chr7 (200-333)||(15700666-15700799)
chr7 (265-333)||(58409-58477)
chr7 (268-332)||(8488093-8488157)
chr7 (268-332)||(8513752-8513816)
chr7 (261-333)||(33556097-33556169)
chr7 (204-333)||(8930700-8930829)
chr7 (264-332)||(708424-708492)
chr7 (185-299)||(12127080-12127193)
chr7 (264-332)||(15575644-15575712)
chr7 (266-333)||(16250219-16250286)
chr7 (259-333)||(15720767-15720841)
chr7 (264-333)||(20252177-20252246)
chr7 (259-332)||(47095441-47095514)
chr7 (269-322)||(43276744-43276797)
chr7 (269-333)||(25943255-25943319)
chr7 (268-332)||(43745645-43745709)
chr7 (264-323)||(18874660-18874719)
chr7 (265-332)||(19195601-19195667)
chr7 (115-181)||(4690510-4690575)
chr7 (269-326)||(19283051-19283108)
chr7 (115-180)||(43745797-43745862)
chr7 (126-211)||(48212584-48212668)
chr7 (273-333)||(15700887-15700947)
chr7 (268-333)||(48212726-48212793)
chr7 (264-322)||(3287743-3287801)
chr7 (195-299)||(44374865-44374968)
chr7 (195-299)||(44383730-44383833)
chr7 (268-332)||(4690662-4690726)
chr7 (194-293)||(16463097-16463196)
chr7 (259-299)||(24269937-24269977)
chr7 (200-299)||(37539470-37539570)
chr7 (264-299)||(20586374-20586409)
chr7 (264-299)||(48807320-48807355)
chr7 (194-232)||(19195714-19195752)
chr7 (228-299)||(8851120-8851189)
chr7 (265-317)||(20214151-20214203)
chr7 (268-299)||(4071842-4071873)
chr7 (268-299)||(12754611-12754642)
chr7 (264-299)||(14218890-14218925)
chr7 (268-299)||(29052181-29052212)
chr7 (268-299)||(35771440-35771471)
chr7 (269-299)||(12372296-12372326)
chr7 (269-299)||(12465260-12465290)
chr7 (269-299)||(13147472-13147502)
chr7 (269-299)||(16078352-16078382)
chr7 (280-333)||(831861-831914)
chr7 (280-333)||(1197041-1197094)
chr7 (268-317)||(47974819-47974868)
chr7 (228-299)||(12322891-12322960)
chr7 (259-299)||(15095627-15095667)
chr7 (269-317)||(33002157-33002205)
chr7 (255-299)||(33060460-33060504)
chr7 (136-184)||(42565691-42565739)
[»] scaffold0086 (1 HSPs)
scaffold0086 (174-333)||(35091-35250)
[»] chr4 (39 HSPs)
chr4 (180-333)||(9622477-9622630)
chr4 (180-333)||(10273371-10273525)
chr4 (200-333)||(55583184-55583322)
chr4 (174-299)||(13165154-13165279)
chr4 (126-333)||(25513839-25514059)
chr4 (264-332)||(14631124-14631192)
chr4 (264-332)||(16296927-16296995)
chr4 (265-332)||(9638999-9639066)
chr4 (222-332)||(33186892-33187000)
chr4 (115-177)||(2424233-2424295)
chr4 (269-332)||(12424290-12424355)
chr4 (268-329)||(13847193-13847254)
chr4 (115-202)||(19565764-19565851)
chr4 (264-332)||(15239811-15239879)
chr4 (268-331)||(26446197-26446260)
chr4 (264-317)||(19434554-19434607)
chr4 (115-168)||(26921354-26921407)
chr4 (275-332)||(35660945-35661002)
chr4 (183-227)||(15191285-15191329)
chr4 (115-202)||(12623419-12623506)
chr4 (264-299)||(15115244-15115279)
chr4 (206-331)||(18463014-18463139)
chr4 (113-181)||(18463152-18463220)
chr4 (268-331)||(2424386-2424449)
chr4 (264-299)||(9924176-9924211)
chr4 (264-299)||(14549782-14549817)
chr4 (268-299)||(15008985-15009016)
chr4 (399-438)||(16296757-16296796)
chr4 (268-299)||(21062663-21062694)
chr4 (264-299)||(37019692-37019727)
chr4 (269-299)||(11425965-11425995)
chr4 (255-329)||(14477624-14477697)
chr4 (283-333)||(15747787-15747837)
chr4 (269-299)||(25091675-25091705)
chr4 (269-299)||(35811376-35811406)
chr4 (265-299)||(40230328-40230362)
chr4 (269-299)||(53630474-53630504)
chr4 (259-299)||(12623338-12623378)
chr4 (265-301)||(19022364-19022400)
[»] scaffold0048 (2 HSPs)
scaffold0048 (180-333)||(68637-68790)
scaffold0048 (115-211)||(57084-57179)
[»] chr5 (30 HSPs)
chr5 (172-333)||(20313265-20313424)
chr5 (200-332)||(16063740-16063873)
chr5 (177-299)||(21504161-21504282)
chr5 (183-333)||(32607229-32607380)
chr5 (102-322)||(21398464-21398697)
chr5 (264-332)||(18744863-18744931)
chr5 (269-332)||(23199207-23199270)
chr5 (115-211)||(26750142-26750237)
chr5 (200-317)||(31622121-31622239)
chr5 (161-232)||(26758599-26758670)
chr5 (274-333)||(31621964-31622023)
chr5 (264-332)||(6551285-6551353)
chr5 (115-202)||(660907-660994)
chr5 (273-323)||(1627071-1627121)
chr5 (115-181)||(20197504-20197570)
chr5 (115-180)||(8833052-8833117)
chr5 (126-211)||(14025664-14025748)
chr5 (113-232)||(21404189-21404305)
chr5 (264-299)||(20469171-20469206)
chr5 (265-299)||(21300040-21300074)
chr5 (265-299)||(21617924-21617958)
chr5 (268-325)||(660785-660841)
chr5 (259-299)||(20566568-20566608)
chr5 (269-333)||(36508633-36508697)
chr5 (268-299)||(17011750-17011781)
chr5 (269-299)||(266060-266090)
chr5 (115-164)||(1626767-1626815)
chr5 (272-333)||(30616602-30616663)
chr5 (1-37)||(20313556-20313592)
chr5 (255-299)||(21404107-21404151)
[»] chr2 (35 HSPs)
chr2 (180-333)||(28344899-28345052)
chr2 (174-333)||(23801484-23801649)
chr2 (115-332)||(21369282-21369511)
chr2 (194-333)||(36734376-36734513)
chr2 (183-299)||(17307508-17307623)
chr2 (264-332)||(21315471-21315539)
chr2 (264-332)||(21335261-21335329)
chr2 (127-232)||(14179573-14179679)
chr2 (127-232)||(14183311-14183417)
chr2 (268-332)||(23610615-23610679)
chr2 (265-323)||(149497-149555)
chr2 (115-202)||(23610745-23610830)
chr2 (150-232)||(45528635-45528715)
chr2 (150-232)||(45536029-45536109)
chr2 (109-169)||(19647388-19647448)
chr2 (150-232)||(20005839-20005919)
chr2 (264-299)||(24516208-24516243)
chr2 (264-299)||(27852690-27852725)
chr2 (265-299)||(3539859-3539893)
chr2 (265-299)||(22501993-22502027)
chr2 (265-299)||(22509927-22509961)
chr2 (265-299)||(25142226-25142260)
chr2 (268-317)||(357885-357934)
chr2 (195-232)||(27852765-27852802)
chr2 (255-299)||(45535947-45535991)
chr2 (399-438)||(149633-149672)
chr2 (256-331)||(20005958-20006032)
chr2 (268-299)||(21080968-21080999)
chr2 (268-299)||(40912342-40912373)
chr2 (269-299)||(2523747-2523777)
chr2 (269-299)||(5031129-5031159)
chr2 (269-299)||(24780840-24780870)
chr2 (268-333)||(34491239-34491304)
chr2 (255-289)||(45528563-45528597)
chr2 (195-232)||(22695322-22695359)
[»] scaffold0035 (3 HSPs)
scaffold0035 (174-333)||(43692-43849)
scaffold0035 (174-307)||(39000-39132)
scaffold0035 (8-37)||(43521-43550)
[»] scaffold0369 (1 HSPs)
scaffold0369 (200-332)||(15547-15678)
[»] chr6 (30 HSPs)
chr6 (174-299)||(1818974-1819099)
chr6 (180-330)||(13285739-13285890)
chr6 (183-332)||(19825401-19825549)
chr6 (227-333)||(10446205-10446311)
chr6 (194-288)||(35057577-35057671)
chr6 (200-333)||(29045259-29045392)
chr6 (259-332)||(18982561-18982634)
chr6 (268-332)||(21683074-21683138)
chr6 (265-332)||(23658078-23658145)
chr6 (110-211)||(21682916-21683016)
chr6 (269-332)||(20410512-20410575)
chr6 (259-299)||(30673392-30673432)
chr6 (204-307)||(34140390-34140493)
chr6 (204-307)||(34153006-34153109)
chr6 (264-299)||(15890707-15890742)
chr6 (259-317)||(19167843-19167901)
chr6 (259-317)||(19235127-19235185)
chr6 (259-317)||(28948579-28948637)
chr6 (268-332)||(15998878-15998942)
chr6 (261-331)||(18459296-18459366)
chr6 (264-299)||(24267871-24267906)
chr6 (269-299)||(7827994-7828024)
chr6 (259-317)||(18585809-18585867)
chr6 (265-299)||(18928703-18928737)
chr6 (269-299)||(23150287-23150317)
chr6 (183-217)||(23658190-23658224)
chr6 (183-217)||(34964099-34964133)
chr6 (146-211)||(22557358-22557422)
chr6 (228-299)||(19655192-19655261)
chr6 (228-299)||(27125438-27125507)
[»] scaffold0031 (1 HSPs)
scaffold0031 (200-333)||(127273-127407)
[»] scaffold0004 (5 HSPs)
scaffold0004 (200-333)||(73075-73209)
scaffold0004 (200-333)||(75925-76059)
scaffold0004 (265-333)||(111348-111416)
scaffold0004 (197-333)||(66000-66136)
scaffold0004 (268-299)||(328287-328318)
[»] scaffold1939 (1 HSPs)
scaffold1939 (187-299)||(149-261)
[»] scaffold0878 (1 HSPs)
scaffold0878 (200-332)||(3353-3485)
[»] scaffold0148 (1 HSPs)
scaffold0148 (200-322)||(8843-8966)
[»] scaffold0098 (1 HSPs)
scaffold0098 (264-333)||(40095-40164)
[»] scaffold0730 (1 HSPs)
scaffold0730 (202-333)||(6437-6569)
[»] scaffold0676 (1 HSPs)
scaffold0676 (265-332)||(2870-2937)
[»] scaffold0594 (1 HSPs)
scaffold0594 (262-333)||(2235-2306)
[»] scaffold0213 (2 HSPs)
scaffold0213 (115-232)||(19308-19426)
scaffold0213 (265-332)||(19196-19263)
[»] scaffold1186 (1 HSPs)
scaffold1186 (264-332)||(2009-2077)
[»] scaffold0174 (3 HSPs)
scaffold0174 (265-333)||(19844-19912)
scaffold0174 (186-330)||(5445-5588)
scaffold0174 (269-333)||(11604-11668)
[»] scaffold0005 (1 HSPs)
scaffold0005 (264-332)||(186191-186259)
[»] scaffold0220 (3 HSPs)
scaffold0220 (265-332)||(13938-14005)
scaffold0220 (268-299)||(19976-20007)
scaffold0220 (183-215)||(14052-14084)
[»] scaffold0061 (2 HSPs)
scaffold0061 (209-331)||(14526-14648)
scaffold0061 (209-331)||(23584-23706)
[»] scaffold0282 (1 HSPs)
scaffold0282 (115-181)||(19099-19165)
[»] scaffold0414 (1 HSPs)
scaffold0414 (269-330)||(11160-11221)
[»] scaffold0007 (2 HSPs)
scaffold0007 (259-332)||(16409-16482)
scaffold0007 (259-330)||(18691-18762)
[»] scaffold0379 (3 HSPs)
scaffold0379 (101-333)||(10936-11180)
scaffold0379 (101-159)||(8286-8344)
scaffold0379 (101-159)||(15478-15536)
[»] scaffold0205 (1 HSPs)
scaffold0205 (174-333)||(5520-5678)
[»] scaffold0056 (3 HSPs)
scaffold0056 (268-332)||(18264-18328)
scaffold0056 (126-181)||(18415-18469)
scaffold0056 (264-299)||(67143-67178)
[»] scaffold0555 (1 HSPs)
scaffold0555 (265-328)||(8742-8805)
[»] scaffold0431 (1 HSPs)
scaffold0431 (269-332)||(5620-5685)
[»] scaffold0401 (1 HSPs)
scaffold0401 (115-180)||(8962-9027)
[»] scaffold0011 (2 HSPs)
scaffold0011 (126-211)||(33565-33649)
scaffold0011 (259-299)||(33476-33516)
[»] scaffold0231 (2 HSPs)
scaffold0231 (264-332)||(17516-17584)
scaffold0231 (183-227)||(23710-23754)
[»] scaffold0247 (1 HSPs)
scaffold0247 (269-332)||(1065-1128)
[»] scaffold0139 (3 HSPs)
scaffold0139 (174-229)||(40051-40106)
scaffold0139 (268-328)||(23527-23587)
scaffold0139 (261-332)||(40153-40226)
[»] scaffold0853 (1 HSPs)
scaffold0853 (269-323)||(2454-2508)
[»] scaffold0039 (1 HSPs)
scaffold0039 (126-180)||(9785-9839)
[»] scaffold0017 (3 HSPs)
scaffold0017 (259-332)||(26716-26789)
scaffold0017 (109-169)||(23754-23814)
scaffold0017 (205-331)||(23604-23730)
[»] scaffold0516 (2 HSPs)
scaffold0516 (268-332)||(5304-5368)
scaffold0516 (174-232)||(5102-5160)
[»] scaffold0003 (1 HSPs)
scaffold0003 (261-333)||(96386-96458)
[»] scaffold1437 (1 HSPs)
scaffold1437 (115-202)||(183-270)
[»] scaffold0505 (1 HSPs)
scaffold0505 (269-332)||(4926-4988)
[»] scaffold0203 (1 HSPs)
scaffold0203 (265-332)||(17936-18003)
[»] scaffold1256 (2 HSPs)
scaffold1256 (174-232)||(2094-2152)
scaffold1256 (268-332)||(2199-2263)
[»] scaffold0394 (1 HSPs)
scaffold0394 (261-331)||(7506-7575)
[»] scaffold0439 (1 HSPs)
scaffold0439 (127-180)||(4562-4615)
[»] scaffold0337 (1 HSPs)
scaffold0337 (113-299)||(3226-3402)
[»] scaffold0328 (1 HSPs)
scaffold0328 (265-310)||(18636-18681)
[»] scaffold0116 (1 HSPs)
scaffold0116 (178-230)||(46003-46055)
[»] scaffold0112 (1 HSPs)
scaffold0112 (261-317)||(2893-2949)
[»] scaffold0108 (1 HSPs)
scaffold0108 (259-331)||(6408-6480)
[»] scaffold0092 (1 HSPs)
scaffold0092 (209-331)||(38381-38503)
[»] scaffold1941 (1 HSPs)
scaffold1941 (264-299)||(160-195)
[»] scaffold0802 (1 HSPs)
scaffold0802 (264-299)||(4704-4739)
[»] scaffold0207 (1 HSPs)
scaffold0207 (264-299)||(13387-13422)
[»] scaffold0488 (1 HSPs)
scaffold0488 (183-233)||(12580-12630)
[»] scaffold0298 (1 HSPs)
scaffold0298 (280-333)||(373-426)
[»] scaffold1102 (2 HSPs)
scaffold1102 (255-331)||(1937-2012)
scaffold1102 (150-232)||(1819-1899)
[»] scaffold0285 (1 HSPs)
scaffold0285 (259-299)||(19775-19815)
[»] scaffold0261 (1 HSPs)
scaffold0261 (133-177)||(6284-6328)
[»] scaffold0149 (2 HSPs)
scaffold0149 (264-316)||(21616-21668)
scaffold0149 (264-299)||(29568-29603)
[»] scaffold0059 (1 HSPs)
scaffold0059 (259-299)||(49751-49791)
[»] scaffold0040 (1 HSPs)
scaffold0040 (264-316)||(106046-106098)
[»] scaffold1434 (1 HSPs)
scaffold1434 (258-325)||(1348-1414)
[»] scaffold0628 (1 HSPs)
scaffold0628 (265-296)||(1054-1085)
[»] scaffold0515 (1 HSPs)
scaffold0515 (268-299)||(5051-5082)
[»] scaffold0436 (1 HSPs)
scaffold0436 (268-299)||(8982-9013)
[»] scaffold0334 (1 HSPs)
scaffold0334 (264-299)||(540-575)
[»] scaffold0306 (1 HSPs)
scaffold0306 (268-299)||(5051-5082)
[»] scaffold0241 (1 HSPs)
scaffold0241 (264-299)||(3204-3239)
[»] scaffold0138 (2 HSPs)
scaffold0138 (268-299)||(21119-21150)
scaffold0138 (268-299)||(34134-34165)
[»] scaffold0125 (1 HSPs)
scaffold0125 (183-230)||(33612-33659)
[»] scaffold0113 (1 HSPs)
scaffold0113 (264-299)||(35512-35547)
[»] scaffold0100 (1 HSPs)
scaffold0100 (259-322)||(26624-26687)
[»] scaffold0083 (2 HSPs)
scaffold0083 (268-315)||(5044-5091)
scaffold0083 (268-315)||(10754-10801)
[»] scaffold0077 (1 HSPs)
scaffold0077 (237-299)||(34361-34421)
[»] scaffold0071 (1 HSPs)
scaffold0071 (268-299)||(15294-15325)
[»] scaffold0058 (2 HSPs)
scaffold0058 (261-332)||(59648-59718)
scaffold0058 (113-169)||(59511-59567)
[»] scaffold0057 (1 HSPs)
scaffold0057 (268-299)||(69852-69883)
[»] scaffold0037 (2 HSPs)
scaffold0037 (264-299)||(112961-112996)
scaffold0037 (268-299)||(117806-117837)
[»] scaffold1633 (1 HSPs)
scaffold1633 (269-299)||(1227-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (269-299)||(468-498)
[»] scaffold0956 (1 HSPs)
scaffold0956 (265-299)||(2577-2611)
[»] scaffold0601 (1 HSPs)
scaffold0601 (269-299)||(196-226)
[»] scaffold0230 (1 HSPs)
scaffold0230 (259-317)||(6675-6733)
[»] scaffold0064 (1 HSPs)
scaffold0064 (269-299)||(58768-58798)
[»] scaffold0036 (1 HSPs)
scaffold0036 (269-299)||(78185-78215)
[»] scaffold0032 (1 HSPs)
scaffold0032 (265-299)||(61844-61878)
[»] scaffold0023 (1 HSPs)
scaffold0023 (183-217)||(16649-16683)
[»] scaffold0019 (1 HSPs)
scaffold0019 (269-299)||(24131-24161)
[»] scaffold0001 (1 HSPs)
scaffold0001 (265-299)||(77709-77743)
[»] scaffold0716 (1 HSPs)
scaffold0716 (183-224)||(5590-5631)
[»] scaffold0546 (1 HSPs)
scaffold0546 (195-232)||(8021-8058)
[»] scaffold0109 (1 HSPs)
scaffold0109 (195-232)||(5249-5286)
[»] scaffold0256 (1 HSPs)
scaffold0256 (402-438)||(1971-2007)


Alignment Details
Target: chr3 (Bit Score: 128; Significance: 5e-66; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 174 - 333
Target Start/End: Original strand, 12917211 - 12917370
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| | ||||||| |||||||| ||||||||||||||||||||     
T  12917211 aatacgtagaaactgcttttgggagaaaaagggaaaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaaga 12917310  T
Q  274 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12917311 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 12917370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 180 - 333
Target Start/End: Original strand, 3527068 - 3527221
Alignment:
Q  180 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 279  Q
    ||||||||| ||| ||||||||||||||||||   ||| ||||||||| |||| | ||||||  |||||||| |||||||||||  ||||||||||||||    
T  3527068 tagaaactgtttttgggagaaaaagggagaaatgaagaagtcagagaatagaagaggagcaaacttgtagagtccgaattcaacttatctaaggtaaggg 3527167  T
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  3527168 tgggactagctttctctaataatgggttgtatgattttaaaaaggggtttaaca 3527221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 161 - 333
Target Start/End: Complemental strand, 25202295 - 25202124
Alignment:
Q  161 aatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaatt 259  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| | ||||||| |||||||| |||||||    
T  25202295 aatagagagtcagaatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtccgaatt 25202196  T
Q  260 caaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||  ||||||||||||||||||||||| | ||| ||||||||||||| ||| | ||| ||| |||||||||||    
T  25202195 caataaatctaaggtaagggtgggactagc-ttcgctaataatgggtt-tataaatctgaaatagggtttaaca 25202124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 22841210 - 22841343
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  22841210 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaattcaaccaatctaatgtaagggtgggactagctttctctaa 22841308  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||| ||||| |||||||||||||||    
T  22841309 taatgggttgtataattctgaaaaagggtttaaca 22841343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 183 - 332
Target Start/End: Original strand, 14641463 - 14641611
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 281  Q
    ||||||| || |||||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  14641463 aaactgcatttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtg 14641560  T
Q  282 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  14641561 ggattagctttctctaataatgggttgtataattctaaaaaagggtttaac 14641611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 45803257 - 45803395
Alignment:
Q  194 gggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 292  Q
    |||||||||||| ||||||||||| ||||||||| ||||| | ||||||  || ||||| ||||||||||||||||||| || |||||||||||| ||||    
T  45803257 gggagaaaaagg-agaaagtgagaagtcagagaaagagaagaggagcaaactt-tagagtccgaattcaaccaatctaaagttagggtgggactagcttt 45803354  T
Q  293 ctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  45803355 ctctaataatgggttgtataattctgaaaaagggtttaaca 45803395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 333
Target Start/End: Original strand, 48043372 - 48043540
Alignment:
Q  164 agagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaa 262  Q
    |||||| || ||||||||||||||||||| ||||||||||| || ||||||||| ||||||| ||||||| | ||||||| |||||||  ||||||||||    
T  48043372 agagagtcagaatacgtagaaactgcttttgggagaaaaagagaaaaagtgagaagtcagagaaagagaagaggagcaagcttgtagaatccgaattcaa 48043471  T
Q  263 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
     ||||||||||||||||||  |||| | |||||||||||||| || ||| ||| | ||| |||||||||||    
T  48043472 tcaatctaaggtaagggtgtaactagc-ttctctaataatggatt-tataattttgaaatagggtttaaca 48043540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 332
Target Start/End: Complemental strand, 29907785 - 29907628
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 272  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29907785 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29907688  T
Q  273 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29907687 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29907628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 332
Target Start/End: Complemental strand, 29948951 - 29948794
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 272  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29948951 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29948854  T
Q  273 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29948853 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29948794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 174 - 332
Target Start/End: Complemental strand, 29998105 - 29997948
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 272  Q
    |||||||  |||||| ||| ||||||||| |||||||||||||| ||||||||| ||||| | ||||||| |  ||||| ||| | ||| | ||||||||    
T  29998105 aatacgtgcaaactgtttttgggagaaaa-gggagaaagtgagaagtcagagaaagagaagaggagcaagctc-tagagtccggaatcatctaatctaag 29998008  T
Q  273 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  29998007 gtaagggtgggactagctttctttaatattgggttgtataattctgaaaaagggtttaac 29997948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 54875474 - 54875538
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  54875474 taaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 54875538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 174 - 331
Target Start/End: Original strand, 24548867 - 24549016
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcc---cgaattcaaccaatcta 270  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||  |         ||||| ||   |||  ||| | || |||    
T  24548867 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaagagaaagcg---------gtagaaccttgcga--tcatctaaccta 24548955  T
Q  271 aggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    | ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  24548956 aagtaagggtgagactaactttatctaataatgggttgtatgattctaaaaaggggtttaa 24549016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 14442237 - 14442163
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||||||||    
T  14442237 tcaatcaatctaaggtaagggtgggactagctttctgtaataatgggttgtatgattctaaaaagcggtttaaca 14442163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 2841501 - 2841570
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  2841501 caatctaaggtaagggtgtgactagctttctctaataatgggttgtatgattctaaaaagaggtttaaca 2841570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 6156767 - 6156710
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 321  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6156767 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaa 6156710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 6159461 - 6159393
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||| ||||||||||    
T  6159461 aatctaaggtaagggtgagactcgctttctctaataatgggttgtatgattctaaaaaggggtttaaca 6159393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 14520503 - 14520435
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||    
T  14520503 caatctaaggtaagggtgggactagctttctttaataatgggttgtataattctaaaaaaaggtttaac 14520435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 299
Target Start/End: Original strand, 21845561 - 21845682
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||||| | ||| ||  ||||| || || ||||    ||||||||||    
T  21845561 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagttagataagagaagaggagaaaacttgtaaagtccaaatt----caatctaagg 21845656  T
Q  274 taagggtgggactaactttctctaat 299  Q
    |||||||||||||||| |||| ||||    
T  21845657 taagggtgggactaaccttctttaat 21845682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 14152398 - 14152462
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  14152398 ctaaggtaagggtgggactagctttctctaataatgagttgtatcattctgaaaaagggtttaac 14152462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 17208581 - 17208513
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||| ||||||    
T  17208581 caatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaaggatttaac 17208513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 17669698 - 17669762
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  17669698 taaggtaatgatgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 17669762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 17684835 - 17684899
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||    
T  17684835 taaggtaagggtgggactagttttctgtaataatgggttgtatgattctaaaaaggggtttaaca 17684899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 24547253 - 24547188
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  24547253 ctaaggtaaggatgagactatctttctctaataatgggttgtatgattctaaaaaggagtttaaca 24547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 50755266 - 50755318
Alignment:
Q  281 gggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  50755266 gggactaactttctctaataatggattgtatgattctaaaaaggggtttaaca 50755318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 332
Target Start/End: Original strand, 3160561 - 3160689
Alignment:
Q  204 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataat 302  Q
    |||||||||||||| |||||||||||||| | | | ||| |||||||   | ||||| ||||||||||||||||||||| ||||||| |||| |||| ||    
T  3160561 gggagaaagtgagaagtcagagaagagaagaagggaaagcttgtagaattctgaatttaaccaatctaaggtaagggtgagactaaccttctttaatcat 3160660  T
Q  303 gggttgtatgattctaaaaaagggtttaac 332  Q
    | | | ||| |||||||||| |||||||||    
T  3160661 gag-tatataattctaaaaatgggtttaac 3160689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 5215704 - 5215636
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||| |||||||||||||| |||| ||||||||||||||| ||||||| ||| | ||||||||||||||    
T  5215704 caatataaggtaagggtggcactagctttctctaataatgagttgtataattatgaaaaagggtttaac 5215636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 15566800 - 15566733
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||| |||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  15566800 aatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 15566733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 16050980 - 16050915
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||| |||  ||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaaca 16050915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 19568203 - 19568256
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  19568203 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 19568256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 13185952 - 13185917
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  13185952 caatctaaggtaagggtgggactaactttctctaat 13185917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 40808053 - 40808018
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  40808053 caatctaaggtaagggtgggactaactttctctaat 40808018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 40812890 - 40812855
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  40812890 caatctaaggtaagggtgggactaactttctctaat 40812855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 44274475 - 44274440
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  44274475 caatctaaggtaagggtgggactaactttctctaat 44274440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 2247877 - 2247930
Alignment:
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  2247877 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 2247930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 299
Target Start/End: Original strand, 5200240 - 5200273
Alignment:
Q  266 atctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||    
T  5200240 atctaaggtaagggtgggactaactttctctaat 5200273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 10559030 - 10558981
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    |||||||||| | |||||||||||||||||||||| || |||||||||||    
T  10559030 aaactgcttttgagagaaaaagggagaaagtgagaagtaagagaagagaa 10558981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 48631538 - 48631435
Alignment:
Q  136 taggtttataaaaagagaggttaggaatagagagacataatacg-------tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaag 228  Q
    ||||||||||| |||||||||||||| |||| || |||||||||       |||||||  ||||  ||||||||||||||||||||||| ||  ||||||    
T  48631538 taggtttataataagagaggttaggattagaaagtcataatacggaatacgtagaaacaacttttaggagaaaaagggagaaagtgagaagttggagaag 48631439  T
Q  229 agaa 232  Q
    ||||    
T  48631438 agaa 48631435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 6003248 - 6003181
Alignment:
Q  258 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 326  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||| ||||||||    
T  6003248 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctgaaaaaggg 6003181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 6468254 - 6468298
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 227  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||    
T  6468254 aaacggcttttgggagaaaaagggagaaagtgagaagtcagagaa 6468298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 10380075 - 10380031
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 227  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||    
T  10380075 aaactgtttttgggagaaaaagggagaaagtgagaagtcagagaa 10380031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 10563765 - 10563730
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10563765 caatctaaggtaatggtgggactaactttctctaat 10563730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 15446867 - 15446898
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  15446867 ctaaggtaagggtgggactaactttctctaat 15446898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 33565144 - 33565109
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  33565144 caatctaaggtaagggtgtgactaactttctctaat 33565109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 35960923 - 35960958
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||| ||||||||||||||    
T  35960923 caatctaaggtaagggtgggattaactttctctaat 35960958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 9510906 - 9510964
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| ||||||||||||||||||  ||||||||||||||||  |  |||||||||||||    
T  9510906 tcaatcaatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattct 9510964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 9518881 - 9518939
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| ||||||||||||||||||  ||||||||||||||||  |  |||||||||||||    
T  9518881 tcaatcaatctaaggtaagggtgaaactaactttctctaattctaagttgtatgattct 9518939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 11563781 - 11563747
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||| |||||||||    
T  11563781 aatctaaggtaagggtgggactaaccttctctaat 11563747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 17045018 - 17044988
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaat 17044988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 17047178 - 17047148
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaat 17047148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 17518869 - 17518903
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||| |||||||||||||||||||||||||    
T  17518869 aatctaaggcaagggtgggactaactttctctaat 17518903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 17533731 - 17533765
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||| |||||||||||||||||||||||||    
T  17533731 aatctaaggcaagggtgggactaactttctctaat 17533765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 17541486 - 17541456
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaat 17541456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 22306583 - 22306613
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaat 22306613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 46823214 - 46823180
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgaga 217  Q
    |||||||||| ||||||||||||||||||||||||    
T  46823214 aaactgcttttgggagaaaaagggagaaagtgaga 46823180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 48631391 - 48631353
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  48631391 aaccaatctaaggtaagggtgggactaaccttctttaat 48631353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 49900786 - 49900752
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||| ||||||||||    
T  49900786 aatctaaggtaagggtgggactaattttctctaat 49900752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 24177735 - 24177784
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||||||||||||||||| ||||||||||||| ||  ||||||| |||||    
T  24177735 ctaaggtaagggtgggacaaactttctctaattataagttgtataattct 24177784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 37
Target Start/End: Original strand, 31530825 - 31530854
Alignment:
Q  8 gaagtgtgatattgttgtggtatgtgttgg 37  Q
    ||||||||||||||||||||||||||||||    
T  31530825 gaagtgtgatattgttgtggtatgtgttgg 31530854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 297
Target Start/End: Original strand, 41172371 - 41172399
Alignment:
Q  269 taaggtaagggtgggactaactttctcta 297  Q
    |||||||||||||||||||||||||||||    
T  41172371 taaggtaagggtgggactaactttctcta 41172399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 7e-59; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 174 - 333
Target Start/End: Original strand, 22610172 - 22610331
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| | || |||| |||||| | |||||||||||||||||||||    
T  22610172 aatacgtagaaaccgcttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggaacaagcttgtagggtccgaattcaaccaatctaagg 22610271  T
Q  274 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  22610272 taagggtgggactaactttctctaataatgagttgtatgattctaaaaaggggtttaaca 22610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 174 - 331
Target Start/End: Complemental strand, 20879619 - 20879463
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| |||||||||||||||||||||    
T  20879619 aatacgtagaaactacttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaaacttgtagagtccgaattcaaccaatctaagg 20879520  T
Q  274 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    |||||||||||||||| |||| |||| ||  | | |||| ||||||||||||||||||    
T  20879519 taagggtgggactaaccttctttaatcataag-tatatggttctaaaaaagggtttaa 20879463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 180 - 333
Target Start/End: Complemental strand, 23884309 - 23884159
Alignment:
Q  180 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 279  Q
    ||||||||||||| ||||||||| |||||||||||| | |||||||||||||| | ||||||  |||||||| | ||||||| | |||||||||||||||    
T  23884309 tagaaactgcttttgggagaaaa-gggagaaagtgaaaagtcagagaagagaagaggagcaaacttgtagagtctgaattcatctaatctaaggtaaggg 23884211  T
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
     ||||||| |||||||||  ||||||||||||||||||||||| ||||||||||    
T  23884210 cgggactagctttctcta--aatgggttgtatgattctaaaaaggggtttaaca 23884159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 22484058 - 22483926
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  22484058 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaattcaaccaatctaaggtaagcg-gggactaactttctctaa 22483961  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||| ||||||| ||||| |||||||||||||||    
T  22483960 taatgagttgtataattcttaaaaagggtttaaca 22483926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 22345286 - 22345152
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  22345286 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 22345187  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||  |||| ||||||||||    
T  22345186 taatgggttgtatgattccgaaaaggggtttaaca 22345152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 22356946 - 22356812
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  22356946 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 22356847  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||  |||| ||||||||||    
T  22356846 taatgggttgtatgattccgaaaaggggtttaaca 22356812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 183 - 332
Target Start/End: Complemental strand, 22208405 - 22208258
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 281  Q
    |||||||||| ||||||||| |||||||||||||| |||| |||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  22208405 aaactgcttttgggagaaaa-gggagaaagtgagaagtcaaagaaagagaagaggagcaatctggtagagaccga--tcatctaatctaaggtaagggtg 22208309  T
Q  282 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  22208308 ggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 22208258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 21399774 - 21399705
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21399774 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 21399705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 21794267 - 21794198
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21794267 caatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 21794198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 117 - 331
Target Start/End: Complemental strand, 36306212 - 36305988
Alignment:
Q  117 ggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgag 216  Q
    |||||||  |||||||||||||||||||||||||| ||||||| ||   | | | |||||||||  ||||| |||| |||||||||||||||||||||||    
T  36306212 ggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcaaa-agataatacgtgcaaacttcttttgggagaaaaagggagaaagtgag 36306114  T
Q  217 aggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 302  Q
    | |||||||||||||| |||             ||||||  |||||||| ||||  ||| | ||||||||||||||||| ||||| |||||||||||||     
T  36306113 aagtcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccga--tcatctaatctaaggtaagggtgagactagctttctctaataa- 36306017  T
Q  303 gggttgtatgattctaaaaaagggtttaa 331  Q
     |||||||||||||| ||||||| |||||    
T  36306016 cggttgtatgattctgaaaaaggttttaa 36305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 103 - 211
Target Start/End: Original strand, 36732246 - 36732353
Alignment:
Q  103 tgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 202  Q
    ||||| ||||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||  |||| | ||| ||||| |||    
T  36732246 tgaggggcaaatttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgtgaaaacagtttttgggag-aaa 36732344  T
Q  203 agggagaaa 211  Q
    |||||||||    
T  36732345 agggagaaa 36732353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 18816290 - 18816358
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||    
T  18816290 caatataaggtaagggtgggactagctttctctaaaaatgggttgtataattctgaaaaagggtttaac 18816358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 22483834 - 22483774
Alignment:
Q  273 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  22483834 gtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaaca 22483774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 36404982 - 36405047
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  36404982 ttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgt 36405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 321
Target Start/End: Complemental strand, 18834474 - 18834422
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 321  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18834474 taaggtaagggtgggactagctttctctaataatggattgtatgattctaaaa 18834422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 36732411 - 36732475
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||| |||||||    
T  36732411 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagagtttaac 36732475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 21514743 - 21514680
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||  |||||||||||||| ||||||| ||||| ||||||||||||||    
T  21514743 taaggtaagggtgggactagatttctctaataatgagttgtataattcttaaaaagggtttaac 21514680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 22258306 - 22258369
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||| |||| |||||||||||||||    
T  22258306 taaggtaagggtgagactagctttctctaataatgagttgtataattccaaaaaagggtttaac 22258369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 22474962 - 22474897
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    |||||||||  |||||| ||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  22474962 ttggaataagggagaatatgttaagtttataaaaagagaggttaggaatagagaaacagaatacgt 22474897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 4380616 - 4380680
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 4380680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 12577932 - 12577869
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||  ||||||||||||||    
T  12577932 ctaaggtaagggtgggactaactttctctaataat-agttgtataattccgaaaaagggtttaac 12577869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 4380463 - 4380550
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 202  Q
    |||||||||  |||||| ||||||||||||||||||||||||||| |||||||| ||| |||| ||  |||| | ||| |||||||||    
T  4380463 ttggaataagggagaatatgttaggtttataaaaagagaggttagtaatagagaaacagaataggtgaaaacagtttttgggagaaaa 4380550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 22532122 - 22532180
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  22532122 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 22532180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 22536807 - 22536865
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  22536807 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 22536865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 17978263 - 17978327
Alignment:
Q  116 tggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    ||||||||  |||||| ||||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  17978263 tggaataagggagaatatgttaggtttatataaagagagcttaggaatagagaaacagaatacgt 17978327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 20397500 - 20397540
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  20397500 tcaaccaatctaaggtaagggtgggattaactttctctaat 20397540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 326
Target Start/End: Original strand, 22708313 - 22708380
Alignment:
Q  258 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 326  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||||||||||||    
T  22708313 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctaaaaaaggg 22708380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 21678838 - 21678907
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21678838 aaccaatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21678907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 20022036 - 20022070
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  20022036 aatctaaggtaagggtgggactaactttctctaat 20022070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 17611210 - 17611259
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    |||||||||| |||||||||||||| ||||||||| || |||||||||||    
T  17611210 aaactgcttttgggagaaaaagggaaaaagtgagaagtaagagaagagaa 17611259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 17906848 - 17906897
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  17906848 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 17906897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 18023567 - 18023620
Alignment:
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  18023567 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 18023620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 21676494 - 21676561
Alignment:
Q  263 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21676494 ccaatctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 38184923 - 38184976
Alignment:
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  38184923 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 38184976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 5761586 - 5761555
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaat 5761555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 6101748 - 6101783
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||| ||||||||||||||||||||||    
T  6101748 caatctaaggtaaaggtgggactaactttctctaat 6101783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 17158962 - 17158993
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  17158962 ctaaggtaagggtgggactaactttctctaat 17158993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 19880875 - 19880844
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  19880875 ctaaggtaagggtgggactaactttctctaat 19880844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 23479135 - 23479104
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  23479135 ctaaggtaagggtgggactaactttctctaat 23479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 23899982 - 23900017
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  23899982 caatctaaggtaagggtgtgactaactttctctaat 23900017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 26454761 - 26454730
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  26454761 ctaaggtaagggtgggactaactttctctaat 26454730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 31722488 - 31722523
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||| ||||||||||||||||||||||||||    
T  31722488 caatctaagataagggtgggactaactttctctaat 31722523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 36727033 - 36727068
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  36727033 caatctaaggtaagggtgagactaactttctctaat 36727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 45469214 - 45469249
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  45469214 caatctaaggtaagggtgagactaactttctctaat 45469249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 20517028 - 20517066
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  20517028 aaccaatctaaggtaagggtgggactaaccttctttaat 20517066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 332
Target Start/End: Original strand, 21676590 - 21676654
Alignment:
Q  266 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||| ||| | ||| ||||||||||    
T  21676590 atctaaggtaagggtgggactagc-ttctctaataatgggtt-tataattatgaaatagggtttaac 21676654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 18834573 - 18834541
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtga 215  Q
    |||||||||| ||||||||||||||||||||||    
T  18834573 aaactgcttttgggagaaaaagggagaaagtga 18834541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 22317901 - 22317941
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||| |||||||||||||||||||||||||| ||| |||||    
T  22317901 tcaatcaatctaaggtaagggtgggactaaccttcactaat 22317941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 22474818 - 22474778
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  22474818 tcaatcaatctaaggtaagggtgggactaaccttctttaat 22474778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 36405122 - 36405162
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||| |||||||||||||||||| |||||||||||| ||||    
T  36405122 tcaatcaatctaaggtaagggtgtgactaactttctttaat 36405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 174 - 333
Target Start/End: Complemental strand, 34392915 - 34392756
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    |||||||||||||| |||| |||||||||| ||||||||||||| |||||||||||||| ||||||||  |||||||| || ||||||||||||||||||    
T  34392915 aatacgtagaaactccttttgggagaaaaaaggagaaagtgagaagtcagagaagagaatatgagcaatcttgtagagtccaaattcaaccaatctaagg 34392816  T
Q  274 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  34392815 taagggtgtgactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 34392756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 183 - 333
Target Start/End: Complemental strand, 8306743 - 8306594
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 281  Q
    |||||||||| | |||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||| |||    
T  8306743 aaactgcttttgagagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagagtg 8306646  T
Q  282 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||||||||    
T  8306645 ggactagctttctctaataatgggttgtataattctaaaaaggggtttaaca 8306594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 17901719 - 17901858
Alignment:
Q  194 gggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 292  Q
    |||||||||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||| | ||| | | ||||||||||||||| ||||| ||||    
T  17901719 gggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgagactagcttt 17901817  T
Q  293 ctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  17901818 ctctaataatgggttgtataattctgaaaaagggtttaaca 17901858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 174 - 333
Target Start/End: Complemental strand, 35895246 - 35895087
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaag 272  Q
    |||||||  |||||| ||| ||||||||| ||||||||| |||| ||||||||| ||||| | ||||||| ||||||||   ||| ||| | ||||||||    
T  35895246 aatacgtgaaaactgtttttgggagaaaa-gggagaaagagagaagtcagagaaagagaagaggagcaagcttgtagagtttgaaatcatctaatctaag 35895148  T
Q  273 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||| |||| |||||| |||| |||||||||||||||||||||||| ||||||| |||||||    
T  35895147 gtatgggtaggactagctttatctaataatgggttgtatgattctgaaaaaggttttaaca 35895087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 39061437 - 39061310
Alignment:
Q  204 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatg 303  Q
    |||||||||||||| |||||||||||||| ||||||||  |||||||| | |||||||||| |||||||||||| ||||||||||| |||| |||| |||    
T  39061437 gggagaaagtgagaagtcagagaagagaagatgagcaaacttgtagagtctgaattcaacctatctaaggtaagagtgggactaaccttctgtaatcatg 39061338  T
Q  304 ggttgtatgattctaaaaaagggtttaac 332  Q
     | | ||| ||||| ||||| ||||||||    
T  39061337 ag-tatataattctgaaaaaaggtttaac 39061310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 127 - 332
Target Start/End: Original strand, 28476579 - 28476797
Alignment:
Q  127 agaatgtgttaggtttataaaaagagaggttaggaa-tagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag 225  Q
    ||||||||||||||||||||||||| ||||||| || | |  | | | |||| |||||||||||||| |||||||||||||||||||||||| |||||||    
T  28476579 agaatgtgttaggtttataaaaagaaaggttagaaagtcggaatagagaatatgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagag 28476678  T
Q  226 aag--------------agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtat 311  Q
    |||              |||| | ||||||  ||| |||| |||   ||| | |||||||||||||||||||||||  |||||||||||||| |||||||    
T  28476679 aagggaagaatcttgtgagaagaggagcaatcttgcagagtccgg--tcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtat 28476776  T
Q  312 gattctaaaaaagggtttaac 332  Q
     ||||| ||||||||||||||    
T  28476777 aattctgaaaaagggtttaac 28476797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 45499598 - 45499530
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  45499598 aatctaaggtaagggtgagactagctttctctaataatgggttgtatgattctataaaggggtttaaca 45499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 50544929 - 50544861
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  50544929 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 50544861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 22145666 - 22145729
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  22145666 taaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaaaagggtttaac 22145729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 38056668 - 38056735
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||||    
T  38056668 aatctaaggtaagggtgggactagctttctctagtaatgggttgtataattctgaaaaagggtttaac 38056735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 20588696 - 20588624
Alignment:
Q  263 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaa--aaaagggtttaaca 333  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||||||    
T  20588696 ccaatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaaca 20588624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 20593234 - 20593162
Alignment:
Q  263 ccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaa--aaaagggtttaaca 333  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||||||    
T  20593234 ccaatttaaggtaagggtgggattagctttctctaataatgggttgtatgattctaaaaaaaagggtttaaca 20593162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 266 - 329
Target Start/End: Original strand, 635001 - 635064
Alignment:
Q  266 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 329  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||    
T  635001 atctaaggtaagggtgagactagctttctctaataataggttgtataattctaaaaaagggttt 635064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 331
Target Start/End: Complemental strand, 12711101 - 12710857
Alignment:
Q  101 gctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaa-ctgctttcgggag 198  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||||| ||||||| ||   | |  | | |||||||||||| ||||||| |||||    
T  12711101 gctgaggggcagaataggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcataatagagaatacgtagaaaactgctttagggag 12711002  T
Q  199 aaaaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtggga 284  Q
    ||||| || |||||||||| |||||||||||||| |||             ||||||  |||||||| || |  ||| | |||||||||||| | |||||    
T  12711001 aaaaatggtgaaagtgagaagtcagagaagagaagaatcttatgagaagaggagcaatcttgtagagtccca--tcatctaatctaaggtaaagatggga 12710904  T
Q  285 ctaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    ||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  12710903 ctagctttctctaatattgggttgtataattctgaaaaagggtttaa 12710857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 6834297 - 6834164
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| ||| ||||| ||||| | ||||||| || ||||| ||| | ||| | | ||||||| |||||||  |||| ||||||||||    
T  6834297 aaaagggagaaagtgagaagtcggagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggcaagggtgatactagctttctctaa 6834199  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||| ||||||| ||||| |||||||||||||||    
T  6834198 taatgagttgtataattctgaaaaagggtttaaca 6834164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 289
Target Start/End: Original strand, 21187968 - 21188054
Alignment:
Q  204 gggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtag-agcccgaattcaaccaatctaaggtaagggtgggactaac 289  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||| |  | ||||| |||||||||||||||||||||||||||||    
T  21187968 gggagaaagtgagaagtcagagaagagaagaagagaaagtttgtagaattcagaatttaaccaatctaaggtaagggtgggactaac 21188054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 24719357 - 24719422
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    |||||||||  || ||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  24719357 ttggaataagggataatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgt 24719422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 44892659 - 44892594
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    |||||||||  |||||| |||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  44892659 ttggaataagggagaatatgttaggtttataaaaggagaggttaggaatagagaaacatgatacgt 44892594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 7703184 - 7703140
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatg 303  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  7703184 tcaaccaatctaaggtaagggtgggactagctttctctaataatg 7703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 24719514 - 24719573
Alignment:
Q  272 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  24719514 ggtaagggtgg-actagctttctctaataatgggttgtataattctgaaaaagggtttaac 24719573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 14792403 - 14792474
Alignment:
Q  109 gcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    ||||| ||| |||||  |||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  14792403 gcaaatttgaaataagggagaatatgttaggtttataaaaagagaggttatgaatagagaaacagaatacgt 14792474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 21168995 - 21168933
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 321  Q
    |||||||||||||||||||||||| | ||||||||||||||  | |||||||| |||||||||    
T  21168995 tcaaccaatctaaggtaagggtggaattaactttctctaattttaggttgtataattctaaaa 21168933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 24723341 - 24723399
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  24723341 tcaatcaatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 24723399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 7051917 - 7051970
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  7051917 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 7051970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 51336532 - 51336467
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  51336532 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 51336467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 8275988 - 8276052
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||| ||||| |||| |||||||||| || |||| ||||| ||||||||||||||    
T  8275988 ctaaggtaagggtgtgactagctttatctaataatgagtggtataattctgaaaaagggtttaac 8276052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 16401963 - 16401901
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||| ||| |||||||||||    
T  16401963 taaggtaagggtgggactaac-ttctctaataatgggtt-tataattctgaaatagggtttaaca 16401901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 12327742 - 12327807
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||| |||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  12327742 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 12327807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 168
Target Start/End: Complemental strand, 18121794 - 18121741
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagaga 168  Q
    |||||||||  |||||| |||||| |||||||||||||||||||||||| ||||    
T  18121794 ttggaataagggagaatatgttagatttataaaaagagaggttaggaattgaga 18121741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 21239044 - 21239097
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||||||||||| |||||||||||||||||||||||  |  |||||||||||||    
T  21239044 caatctaaggtatgggtgggactaactttctctaattctaagttgtatgattct 21239097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 20846338 - 20846382
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 227  Q
    |||||||||| |||||||||||||| ||||||||| |||||||||    
T  20846338 aaactgcttttgggagaaaaagggaaaaagtgagaagtcagagaa 20846382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 21187889 - 21187945
Alignment:
Q  113 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag 169  Q
    |||||||||||  |||||||||||||||| | || | ||||||||||||||||||||    
T  21187889 aattggaataagggagaatgtgttaggttaagaataggagaggttaggaatagagag 21187945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 24007224 - 24007287
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||| |||||||| ||||| | |||||| ||||| ||||| ||||||||    
T  24007224 ctaaggtaagggtgggactagctttctctgataat-gattgtataattctgaaaaaaggtttaac 24007287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 28193561 - 28193605
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 227  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||    
T  28193561 aaactgcttttgggagaaaaagtgagaaagtgagaagtcagagaa 28193605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 4595848 - 4595883
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  4595848 caatctaaggtaagggtgagactaactttctctaat 4595883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 8306529 - 8306490
Alignment:
Q  399 aagagtagctaatccgatgaattaaggtaataagtggtgt 438  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  8306529 aagagtaggtaatccgatgaattaaggtaataattggtgt 8306490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 13302959 - 13302924
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  13302959 caatctaaggtaagggtgagactaactttctctaat 13302924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 29763631 - 29763662
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  29763631 ctaaggtaagggtgggactaactttctctaat 29763662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 42913106 - 42913071
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  42913106 caatctaaggtaagggtgagactaactttctctaat 42913071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 46197744 - 46197775
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  46197744 ctaaggtaagggtgggactaactttctctaat 46197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 289
Target Start/End: Original strand, 7320584 - 7320614
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaac 289  Q
    |||||||||||||||||||||||||||||||    
T  7320584 tcaaccaatctaaggtaagggtgggactaac 7320614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 16058310 - 16058344
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||| ||||||||||    
T  16058310 aatctaaggtaagggtgggactaaatttctctaat 16058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 19676763 - 19676733
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaat 19676733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 20708048 - 20708121
Alignment:
Q  258 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||| ||||||||||||||||||||||||||| |||| |||  ||| ||| ||| ||||| |||||||| |||||    
T  20708048 ttcatccaatctaaggtaagggtgggactaaccttctttaa-catgagttctataattctgaaaaaggggttaac 20708121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 21046049 - 21046079
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaat 21046079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 38056589 - 38056623
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgaga 217  Q
    |||||||||| ||||||||||||||||||||||||    
T  38056589 aaactgcttttgggagaaaaagggagaaagtgaga 38056623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 51324566 - 51324508
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| |||||||||||||||||| ||||||||||| |||||  |  |||||||||||||    
T  51324566 tcaatcaatctaaggtaagggtgagactaactttccctaattctaagttgtatgattct 51324508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 14237582 - 14237619
Alignment:
Q  195 ggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    ||||||||||||||||||||||| || |||||||||||    
T  14237582 ggagaaaaagggagaaagtgagaagtaagagaagagaa 14237619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 299
Target Start/End: Original strand, 21243688 - 21243788
Alignment:
Q  200 aaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaa-ggtaagggtgggactaactttctcta 297  Q
    |||||||||||||||||| ||||||| ||||||| | ||||||| || ||||| ||| | ||| | ||||||| |||||||||| ||||||| |||| ||    
T  21243688 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctaatctaagggtaagggtgagactaaccttcttta 21243786  T
Q  298 at 299  Q
    ||    
T  21243787 at 21243788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 46560203 - 46560166
Alignment:
Q  195 ggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    ||||||||||||||||||||||| || |||||||||||    
T  46560203 ggagaaaaagggagaaagtgagaagtaagagaagagaa 46560166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 161 - 331
Target Start/End: Complemental strand, 38299908 - 38299738
Alignment:
Q  161 aatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattc 260  Q
    ||||||||| ||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||| | ||| ||    
T  38299908 aatagagagccataatacgtagaaacgacttttgggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtctgaaatc 38299809  T
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    | | ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  38299808 atctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaa 38299738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 161 - 333
Target Start/End: Original strand, 36300533 - 36300705
Alignment:
Q  161 aatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattc 260  Q
    |||||||| ||||||||||||||||||||||| ||  || |||| |||||||||||| |||||||||||||| | ||||||  |||||||  ||||||||    
T  36300533 aatagagatacataatacgtagaaactgcttttggtggagaaagtgagaaagtgagaagtcagagaagagaagaggagcaaacttgtagaatccgaattc 36300632  T
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    || ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  36300633 aatcaatctaaggtaaaggtgagactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 36300705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 13315012 - 13315146
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||| ||||| ||||||||| ||||| | ||||||| |||||||| | ||| | | | ||||||||||||||||| ||||| ||||||||||    
T  13315012 aaaagggagaaaatgagaagtcagagaaagagaataggagcaagcttgtagagtctgaaataatctaatctaaggtaagggtgagactatctttctctaa 13315111  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||| |||| ||||||||||    
T  13315112 taatgggttgtatgattctgaaaaggggtttaaca 13315146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 13744440 - 13744574
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||| ||||| || |||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  13744440 aaaagggagaaattgagaagttagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 13744539  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||| |||||||||||||| ||||||||||    
T  13744540 taatgggttttatgattctaaaaaggggtttaaca 13744574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 18570768 - 18570635
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    ||||||| |||||||||| || |||||| ||||| | | ||||| || ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  18570768 aaaagggggaaagtgagaagttagagaaagagaagaggggcaagctt-tagagtccgaattcaaccaatctaaggtaagggtgagactagctttctctaa 18570670  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||| ||||||| ||| ||||||||||    
T  18570669 taatgggttgtaagattctagaaaggggtttaaca 18570635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 15700666 - 15700799
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| || ||||||||||| | ||||||| |||||||| | | | |||   |||||||||||||| ||  |||| |||||||||||    
T  15700666 aaaagggagaaagtgagaagttagagaagagaagaggagcaagattgtagagtcagtaatcatataatctaaggtaaggatgatactagctttctctaat 15700765  T
Q  300 aatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||| ||||||||| ||||||||||    
T  15700766 aatgggttgtatggttctaaaaaggggtttaaca 15700799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 58409 - 58477
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  58409 aatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 58477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 8488093 - 8488157
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 8513752 - 8513816
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8513752 ctaaggtaagggtgggactaactttctctaataatgggttgtataattctaaaaaagggtttaac 8513816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 33556097 - 33556169
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  33556097 aaccaatctaagataagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 33556169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 204 - 333
Target Start/End: Original strand, 8930700 - 8930829
Alignment:
Q  204 gggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 302  Q
    |||||||||||||| |||| |||| ||||| | ||||||| || ||| | ||| | ||| | |||||||||||||||||||||||  |||||||||||||    
T  8930700 gggagaaagtgagaagtcaaagaaagagaagaggagcaagctt-tagcgtccggaatcatctaatctaaggtaagggtgggactacatttctctaataat 8930798  T
Q  303 gggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||| ||||||||||    
T  8930799 gggttgtatgattctaaaaaggggtttaaca 8930829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 708424 - 708492
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  708424 caatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 708492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 185 - 299
Target Start/End: Original strand, 12127080 - 12127193
Alignment:
Q  185 actgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtggg 283  Q
    |||||||| |||||||||||| ||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||||    
T  12127080 actgcttttgggagaaaaaggaagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtggg 12127177  T
Q  284 actaactttctctaat 299  Q
    ||||||||||||||||    
T  12127178 actaactttctctaat 12127193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 15575644 - 15575712
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  15575644 caatctaaggtaggggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 15575712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 16250219 - 16250286
Alignment:
Q  266 atctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||||||||||||||    
T  16250219 atctaaggtaagggtgggactaactttctctaataatgagttgtataattttgaaaaagggtttaaca 16250286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 15720841 - 15720767
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||| |||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  15720841 tcaatcaatttaaggtaaaggtgggactagctttctctcataatgggttgtatgattctaaaaaggggtttaaca 15720767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 20252177 - 20252246
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  20252177 caatctaaggtaagggtaggactagctttctctaataatgagttgtataattctgaaaaagggtttaaca 20252246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 47095514 - 47095441
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||    
T  47095514 tcaatcaatctaaggtaagggtgggactagctttctctaataatgggttgaataattctgaaaaatggtttaac 47095441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 43276744 - 43276797
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 322  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  43276744 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaa 43276797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 25943319 - 25943255
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||| |||||||||||||||||||||||| || | |||| ||||||||||    
T  25943319 taaggtaagggtgggactagctttctctaataatgggttgtatgtttttgaaaaggggtttaaca 25943255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 43745709 - 43745645
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||| ||||||||||||||| ||||||| ||| | ||||||||||||||    
T  43745709 ctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaaaagggtttaac 43745645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 18874660 - 18874719
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 323  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| |||||    
T  18874660 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaa 18874719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 19195667 - 19195601
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||  |||||||||||||    
T  19195667 aatctaaggtaagggtgggactagctttctctaataatgagttgtataattct-gaaaagggtttaac 19195601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 4690510 - 4690575
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 181  Q
    |||||||||  |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4690510 ttggaataagggagaatatgttaggtttataaaa-gagaggttaggaatagagaaacataatacgta 4690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 326
Target Start/End: Complemental strand, 19283108 - 19283051
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 326  Q
    ||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||    
T  19283108 taaggtaagggtgagactaactttctctaagaatgggttgtataattctgaaaaaggg 19283051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 43745862 - 43745797
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    |||||||||  || ||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  43745862 ttggaataagggataatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgt 43745797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 48212584 - 48212668
Alignment:
Q  126 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 211  Q
    |||||| ||||||||||||||||||||||||||| |||||||| ||| |||||||  |||| | ||| ||||| ||||||||||||    
T  48212584 gagaatatgttaggtttataaaaagagaggttagaaatagagaaacagaatacgtgaaaacagtttttgggag-aaaagggagaaa 48212668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 15700887 - 15700947
Alignment:
Q  273 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||| | ||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  15700887 gtaagggggagactagctttctctaataatgagttgtatgattctaaaaaggggtttaaca 15700947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 48212726 - 48212793
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa--gggtttaaca 333  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||  ||||||||||    
T  48212726 ctaaggtaagggtgtgactagctttctccaataataggttgtatgattctaaaaaaaggggtttaaca 48212793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 3287801 - 3287743
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 322  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| ||||    
T  3287801 caatctaaggtaagggtgagactagctttctctaataataggttgtataattctgaaaa 3287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 44374968 - 44374865
Alignment:
Q  195 ggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 293  Q
    |||||||||| |||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||||||| || ||||||||    
T  44374968 ggagaaaaagagagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtgagagtaactttc 44374871  T
Q  294 tctaat 299  Q
    ||||||    
T  44374870 tctaat 44374865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 44383833 - 44383730
Alignment:
Q  195 ggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 293  Q
    |||||||||| |||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | ||||||||||||||||| || ||||||||    
T  44383833 ggagaaaaagagagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtgagagtaactttc 44383736  T
Q  294 tctaat 299  Q
    ||||||    
T  44383735 tctaat 44383730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 4690662 - 4690726
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||| ||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 4690726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 16463196 - 16463097
Alignment:
Q  194 gggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaacttt 292  Q
    |||||||||||||||||||||||| ||||||| ||||||| | ||||||| || ||||| ||| | ||| | | ||||||||||||||| | ||||||||    
T  16463196 gggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgcggctaacttt 16463098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 24269937 - 24269977
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  24269937 tcaaccaatctaaggtaagggtgggattaactttctctaat 24269977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 37539570 - 37539470
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    ||||| |||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||| ||||||||||||||||| |||| |||    
T  37539570 aaaagagagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaagtaagggtgggactaacattctataa 37539471  T
Q  299 t 299  Q
    |    
T  37539470 t 37539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 20586409 - 20586374
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  20586409 caatctaaggtaagggtgggactaactttctctaat 20586374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 48807320 - 48807355
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  48807320 caatctaaggtaagggtgggactaactttctctaat 48807355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 19195752 - 19195714
Alignment:
Q  194 gggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19195752 gggagaaaaagggagaaagtgagaagtcagagaagagaa 19195714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 8851120 - 8851189
Alignment:
Q  228 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  8851120 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgggactaactttctctaat 8851189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 20214203 - 20214151
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    ||||||||||||||||||||||||||||||| |||  || ||||||| |||||    
T  20214203 aatctaaggtaagggtgggactaactttctcaaattctgagttgtataattct 20214151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 4071873 - 4071842
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  4071873 ctaaggtaagggtgggactaactttctctaat 4071842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 12754611 - 12754642
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaat 12754642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 14218890 - 14218925
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  14218890 caatctaaggtaagggtgagactaactttctctaat 14218925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 29052181 - 29052212
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  29052181 ctaaggtaagggtgggactaactttctctaat 29052212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 35771440 - 35771471
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  35771440 ctaaggtaagggtgggactaactttctctaat 35771471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 12372326 - 12372296
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaat 12372296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 12465260 - 12465290
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaat 12465290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 13147472 - 13147502
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  13147472 taaggtaagggtgggactaactttctctaat 13147502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 16078382 - 16078352
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaat 16078352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 831861 - 831914
Alignment:
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||  |||||||||  ||||||||||  |||||||||||||||||||||    
T  831861 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaaca 831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 333
Target Start/End: Original strand, 1197041 - 1197094
Alignment:
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||  |||||||||  ||||||||||  |||||||||||||||||||||    
T  1197041 tgggactagttttctctaaagatgggttgtacaattctaaaaaagggtttaaca 1197094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 317
Target Start/End: Original strand, 47974819 - 47974868
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||||||||||||| |||||||||||||||||  |  |||||||||||||    
T  47974819 ctaaggtaagggtgagactaactttctctaattctaagttgtatgattct 47974868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 12322891 - 12322960
Alignment:
Q  228 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||| ||||||  |||||||| ||||  ||| | ||| |||||||||||||| ||||||||||||||||    
T  12322891 gagaaaaggagcaatcttgtagagtccga--tcatctaatttaaggtaagggtggaactaactttctctaat 12322960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 15095627 - 15095667
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||| |||||||||||||||||||||||||| ||| |||||    
T  15095627 tcaatcaatctaaggtaagggtgggactaaccttcactaat 15095667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 33002205 - 33002157
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||||||||||| ||||||||||||||||||  |  |||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagttgtatgattct 33002157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 33060504 - 33060460
Alignment:
Q  255 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| ||| ||||||||||||||||||||||||| |||| ||||    
T  33060504 gaattgaacaaatctaaggtaagggtgggactaaccttctttaat 33060460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 42565691 - 42565739
Alignment:
Q  136 taggtttataaaaagagaggttaggaatagagagacataatacgtagaa 184  Q
    |||||||| || |||||||||||||||||||||| || || ||||||||    
T  42565691 taggtttaaaataagagaggttaggaatagagagtcagaacacgtagaa 42565739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 174 - 333
Target Start/End: Original strand, 35091 - 35250
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    ||||||||| ||| ||||| |||||||||||||||||| ||||| || ||||||||||| | ||||||| |||||||| |||||||||||||||||||||    
T  35091 aatacgtagtaaccgcttttgggagaaaaagggagaaaatgagaagttagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaagg 35190  T
Q  274 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||    
T  35191 taagggtggtactagctttccctaataatgggttgtataattctaaaaaagggtttaaca 35250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 180 - 333
Target Start/End: Complemental strand, 9622630 - 9622477
Alignment:
Q  180 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 279  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||||||||| | ||||||  |||||||| | |||||||| ||||||||||||||||    
T  9622630 tagaaactgcttttgggagaaaaagggagaaagtgagaagttagagaagagaagaggagcaaacttgtagagtctgaattcaatcaatctaaggtaaggg 9622531  T
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  9622530 tgggactagctttctctaataatgggttgtctgattctaaaaaggggtttaaca 9622477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 180 - 333
Target Start/End: Complemental strand, 10273525 - 10273371
Alignment:
Q  180 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagg 278  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||| ||||| | ||||||| |||||||| | ||| ||  | ||||||||||||||    
T  10273525 tagaaactgcttttgggagaaaaatggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgaaatcgtctaatctaaggtaagg 10273426  T
Q  279 gtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  10273425 gtgggactagctttctctaataatgggttgtatgattctaaaaaggggtataaca 10273371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 55583322 - 55583184
Alignment:
Q  200 aaaagggagaaagtgagaggtca-----gagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttct 294  Q
    |||||||||||||||||| ||||     |||||||||| | ||||||  |||||||| |||||||||||| |||||||||||||||||||||| ||||||    
T  55583322 aaaagggagaaagtgagaagtcaaagaagagaagagaagaggagcaaacttgtagagtccgaattcaacctatctaaggtaagggtgggactagctttct 55583223  T
Q  295 ctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  55583222 ctaataatgggttgtatgattataaaaaggggtttaaca 55583184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 13165279 - 13165154
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    ||||| ||||||||| ||| ||||||||| || ||||| ||||| |||||||||||||| | ||||||  |||||||| || ||||||||||||||||||    
T  13165279 aatacatagaaactgtttttgggagaaaagggaagaaattgagaagtcagagaagagaagaggagcaaacttgtagagtccaaattcaaccaatctaagg 13165180  T
Q  274 taagggtgggactaactttctctaat 299  Q
    |||||||||||||||| |||| ||||    
T  13165179 taagggtgggactaaccttctttaat 13165154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 126 - 333
Target Start/End: Complemental strand, 25514059 - 25513839
Alignment:
Q  126 gagaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcaga 224  Q
    |||||||||||||||||||||||||| ||||||| ||   |||  | | ||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  25514059 gagaatgtgttaggtttataaaaagaaaggttagaaagtcagaatagagaatacgtagaaactgcttttgggagaaaaatggagaaagtgagaagtcaga 25513960  T
Q  225 gaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgta 310  Q
    |||||||| |||             ||||||  |||||||| | ||  ||| | |||||||||||| |||||||||| ||||||||||||||| ||||||    
T  25513959 gaagagaagaatcttgtgagaagaggagcaatcttgtagagtctga--tcatctaatctaaggtaatggtgggactagctttctctaataatgagttgta 25513862  T
Q  311 tgattctaaaaaagggtttaaca 333  Q
    | ||||| |||||||||||||||    
T  25513861 taattctgaaaaagggtttaaca 25513839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 14631192 - 14631124
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  14631192 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 14631124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 16296995 - 16296927
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||    
T  16296995 caatctaaggtaagggtgggactagctttctctaataatgagttgtataattctgaaaaagggtttaac 16296927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 9639066 - 9638999
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||| | ||||| ||||||||||||||    
T  9639066 aatctaaggtaagggtgggactagctttctctaataatgagttgtgtaattctgaaaaagggtttaac 9638999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 222 - 332
Target Start/End: Complemental strand, 33187000 - 33186892
Alignment:
Q  222 agagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaa 321  Q
    ||||||||||  | |||||| ||||||||| ||||  ||| | ||| ||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||    
T  33187000 agagaagagaggaggagcaattttgtagagtccga--tcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T
Q  322 aagggtttaac 332  Q
    |||||||||||    
T  33186902 aagggtttaac 33186892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 2424233 - 2424295
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataata 177  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  2424233 ttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacataata 2424295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 12424290 - 12424355
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattct--aaaaaagggtttaac 332  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||    
T  12424290 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaac 12424355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 268 - 329
Target Start/End: Complemental strand, 13847254 - 13847193
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 329  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  13847254 ctaaggtaagggtgagactagctttctctaataatgggttgtataattctaaaaaatggttt 13847193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 19565764 - 19565851
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 202  Q
    |||||||||  |||||| |||||| ||||||||||||||||||||||||||||| ||| |||||||  |||| | ||| |||||||||    
T  19565764 ttggaataagagagaatatgttagatttataaaaagagaggttaggaatagagaaacagaatacgtgaaaacagtttttgggagaaaa 19565851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 15239811 - 15239879
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||| ||||| |||||||||||||||  |||||| | ||| ||||||||||||||    
T  15239811 caatctaaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaaaagggtttaac 15239879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 26446260 - 26446197
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    |||| |||||||| |||||| ||||||||||||||||||||||| ||||| ||||| |||||||    
T  26446260 ctaaagtaagggtaggactagctttctctaataatgggttgtataattctgaaaaatggtttaa 26446197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 19434554 - 19434607
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    ||||||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  19434554 caatctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 19434607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 26921354 - 26921407
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagaga 168  Q
    |||||||||  |||||| |||||||||||||||||||||||||| |||||||||    
T  26921354 ttggaataagggagaatatgttaggtttataaaaagagaggttatgaatagaga 26921407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 35661002 - 35660945
Alignment:
Q  275 aagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||    
T  35661002 aagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaac 35660945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 15191329 - 15191285
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 227  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  15191329 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaa 15191285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 12623506 - 12623419
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 202  Q
    |||||||||  || ||| |||||||||||||||||||| |||||| |||||||| ||| |||||||  |||| | ||| |||||||||    
T  12623506 ttggaataagagataatatgttaggtttataaaaagaggggttagtaatagagaaacagaatacgtgaaaacagtttttgggagaaaa 12623419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 15115279 - 15115244
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  15115279 caatctaaggtaagggtgggactaactttctctaat 15115244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 331
Target Start/End: Complemental strand, 18463139 - 18463014
Alignment:
Q  206 gagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgg 304  Q
    |||||||||||| ||||||||| |||| | | | ||| ||||||||    ||||| |||||||||||||||| |||||||||||| |||| |||| |||     
T  18463139 gagaaagtgagaagtcagagaaaagaagaagggaaagcttgtagagttgagaatttaaccaatctaaggtaaaggtgggactaaccttctttaatcatga 18463040  T
Q  305 gttgtatgattctaaaaaagggtttaa 331  Q
    | | ||| ||||| |||||||||||||    
T  18463039 g-tatataattctgaaaaagggtttaa 18463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 18463220 - 18463152
Alignment:
Q  113 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 181  Q
    |||||||||||  |||||||||||||||| | || | |||||||||||||||||||| || || |||||    
T  18463220 aattggaataagggagaatgtgttaggttaagaataggagaggttaggaatagagagtcagaacacgta 18463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 2424386 - 2424449
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    |||||||||||||| |||||||||||||||||  |  ||||||| ||| | |||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaaaagggtttaa 2424449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 9924211 - 9924176
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  9924211 caatctaaggtaagggtgagactaactttctctaat 9924176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 14549817 - 14549782
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  14549817 caatctaaggtaagggtgagactaactttctctaat 14549782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 15009016 - 15008985
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  15009016 ctaaggtaagggtgggactaactttctctaat 15008985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 16296796 - 16296757
Alignment:
Q  399 aagagtagctaatccgatgaattaaggtaataagtggtgt 438  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  16296796 aagagtaggtaatccgatgaattaaggtaataattggtgt 16296757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 21062694 - 21062663
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  21062694 ctaaggtaagggtgggactaactttctctaat 21062663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 37019727 - 37019692
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  37019727 caatctaaggtaagggtgtgactaactttctctaat 37019692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 11425995 - 11425965
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaat 11425965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 14477697 - 14477624
Alignment:
Q  255 gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttt 329  Q
    ||||| |||||||||||||||||||||| |||||| |||| |||| ||| | | ||| ||||| |||||||||||    
T  14477697 gaatttaaccaatctaaggtaagggtggcactaaccttctttaatcatgag-tatataattctgaaaaagggttt 14477624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 15747787 - 15747837
Alignment:
Q  283 gactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||  ||| ||||||| ||||| |||||||||||||||    
T  15747787 gactaactttctctaaagatgagttgtataattctgaaaaagggtttaaca 15747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 25091705 - 25091675
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaat 25091675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 35811376 - 35811406
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  35811376 taaggtaagggtgggactaactttctctaat 35811406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 40230362 - 40230328
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||| ||||    
T  40230362 aatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 53630474 - 53630504
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaat 53630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 12623378 - 12623338
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  12623378 tcaatcaatctaaggtaagggtgggactaaccttctttaat 12623338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 19022400 - 19022364
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataa 301  Q
    |||||||||||| |||| |||||||||||||||||||    
T  19022400 aatctaaggtaaaggtgagactaactttctctaataa 19022364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 180 - 333
Target Start/End: Original strand, 68637 - 68790
Alignment:
Q  180 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 279  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||   || ||| |||||||||  ||||||||| ||||||||||||||||    
T  68637 tagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaaagaagtggaacaaatttgtagagttcgaattcaatcaatctaaggtaaggg 68736  T
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||    
T  68737 tgggactacctttctctaataatgggttatatgattctaaaaacgggtttaaca 68790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 211
Target Start/End: Complemental strand, 57179 - 57084
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 211  Q
    |||||||||| |||||| | |||||||||||||||||||  |||||||| |||| ||| |||||||  |||| | ||| ||||| ||||||||||||    
T  57179 ttggaataaaagagaatatattaggtttataaaaagagaaattaggaatggagaaacagaatacgtgaaaacagtttttgggag-aaaagggagaaa 57084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 172 - 333
Target Start/End: Complemental strand, 20313424 - 20313265
Alignment:
Q  172 ataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaa 271  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| | |||||||||||||||| || ||||||||||||||||    
T  20313424 ataatacgtagaaactgcttttgggagaaaaagggagaaagtgataagtcagagaagagaagaggagcaagtttgtagagtcctaattcaaccaatctaa 20313325  T
Q  272 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||| | |||||||||| |||||| ||| ||||| ||| |||||||||||    
T  20313324 ggtaagggtgggactagc-ttctctaatagtgggtt-tataattctgaaatagggtttaaca 20313265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 200 - 332
Target Start/End: Complemental strand, 16063873 - 16063740
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| || |||||| ||||| | ||||||| |||||||| | | ||||||||||||||||||||||||||||||| ||||||||||    
T  16063873 aaaagggagaaagtgagaagttagagaaagagaagaggagcaagcttgtagagtctgtattcaaccaatctaaggtaagggtgggactacctttctctaa 16063774  T
Q  299 taatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||| ||||||||||||||||||||    
T  16063773 taatgggttgtataattctaaaaaagggtttaac 16063740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 177 - 299
Target Start/End: Complemental strand, 21504282 - 21504161
Alignment:
Q  177 acgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaa 276  Q
    |||||||||||||||| ||||||||| |||||||||||||| || ||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||    
T  21504282 acgtagaaactgcttt-gggagaaaaggggagaaagtgagaagtaagagaagagaagaggagcaagcttgtagagtccgaattcaaccaatctaaggtaa 21504184  T
Q  277 gggtgggactaactttctctaat 299  Q
     |||||||||||| |||| ||||    
T  21504183 aggtgggactaaccttctttaat 21504161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 333
Target Start/End: Original strand, 32607229 - 32607380
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaat--gagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 279  Q
    |||||||||| ||||||||||| |||||||||||| ||||||||| |||||||   ||||||  | |||||| |||| |  | | |||||||||||||||    
T  32607229 aaactgcttttgggagaaaaagagagaaagtgagaagtcagagaaagagaaaagaggagcaatctcgtagagaccgatt--atctaatctaaggtaaggg 32607326  T
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  32607327 tgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 32607380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 322
Target Start/End: Original strand, 21398464 - 21398697
Alignment:
Q  102 ctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaactgctttcgggagaa 200  Q
    |||||| ||||||| |||||||  |||||||||||||||||||||||||| ||||||| ||   | |  | |  ||||||  |||||||||| |||||||    
T  21398464 ctgaggggcaaaataggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcataatagaatatacgtgcaaactgcttttgggagaa 21398563  T
Q  201 aaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggact 286  Q
    ||||||||||||||||| |||||||||||||| |||             ||||||  |||||||| ||||  ||| | |||||||||||||||||||| |    
T  21398564 aaagggagaaagtgagaagtcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccga--tcatctaatctaaggtaagggtgggatt 21398661  T
Q  287 aactttctctaataatgggttgtatgattctaaaaa 322  Q
    | ||||||||||||||||||||||||||||||||||    
T  21398662 agctttctctaataatgggttgtatgattctaaaaa 21398697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 18744931 - 18744863
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  18744931 caatctaaggtaagggtgggactaactttctctaataatgggttgtataattctgaaaaagggtttaac 18744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 23199207 - 23199270
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||    
T  23199207 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaatggtttaac 23199270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 115 - 211
Target Start/End: Complemental strand, 26750237 - 26750142
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 211  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||  |||| | ||| ||||| ||||||||||||    
T  26750237 ttggaaaaaaggagaatatgttaggtttataaaaagagaggttaggactagagaagcataatacgtgaaaacagtttttgggag-aaaagggagaaa 26750142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 31622239 - 31622121
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaagagaaaatg--agcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctcta 297  Q
    |||||||||||||||||| ||||||||| |||||||   |||||| |||||||| | |||  || | |||||||||||||||||||| ||||||||||||    
T  31622239 aaaagggagaaagtgagaagtcagagaa-agaaaatagaagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggattaactttctcta 31622141  T
Q  298 ataatgggttgtatgattct 317  Q
    ||  | |||||||| |||||    
T  31622140 attttaggttgtataattct 31622121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 26758599 - 26758670
Alignment:
Q  161 aatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    ||||||||| || ||||||||||||||||||| | |||||||||||||||||||||| ||| || |||||||    
T  26758599 aatagagagtcagaatacgtagaaactgcttttgcgagaaaaagggagaaagtgagaagtcggataagagaa 26758670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 31622023 - 31621964
Alignment:
Q  274 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  31622023 taagggtggaactatctttctctaataattggttgtatgattctaaaaatgggtttaaca 31621964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 6551285 - 6551353
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||| |||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  6551285 caatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagggtttaac 6551353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 660994 - 660907
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 202  Q
    |||||||||  |||||| ||||||  |||||||||||||||||||||||||||| ||| |||||||  |||| | ||| |||||||||    
T  660994 ttggaataagggagaatatgttagacttataaaaagagaggttaggaatagagaaacagaatacgtgaaaacagtttttgggagaaaa 660907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 1627071 - 1627121
Alignment:
Q  273 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 323  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  1627071 gtaagggtgggactagctttctctaataatgagttgtataattctaaaaaa 1627121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 20197504 - 20197570
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 181  Q
    |||||||||  || ||| |||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  20197504 ttggaataagggaaaatatgttaggtttataaaaagagaggttaggaatagagaaacggaatacgta 20197570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 8833052 - 8833117
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    |||||||||  |||||| | |||||||||||||||||| ||||||||||||||| ||| |||||||    
T  8833052 ttggaataagggagaatatattaggtttataaaaagagtggttaggaatagagaaacagaatacgt 8833117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 14025664 - 14025748
Alignment:
Q  126 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 211  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||| |||| ||  |||| | ||| ||||| ||||||||||||    
T  14025664 gagaatatgttaagtttataaaaagagaggttaggaatagagaaacagaataggtgaaaacagtttttgggag-aaaagggagaaa 14025748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 21404305 - 21404189
Alignment:
Q  113 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaag 212  Q
    |||||||||||  |||||| ||| || |||| || | |||||||||||||||||||| || || ||||| ||||   ||| |||||||||||  ||||||    
T  21404305 aattggaataagggagaatatgtaag-tttagaataggagaggttaggaatagagagtcagaacacgtaaaaacaatttttgggagaaaaag--agaaag 21404209  T
Q  213 tgagaggtcagagaagagaa 232  Q
    ||||| ||||||||||||||    
T  21404208 tgagaagtcagagaagagaa 21404189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 20469171 - 20469206
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  20469171 caatctaaggtaagggtgggactaactttctctaat 20469206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 21300040 - 21300074
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  21300040 aatctaaggtaagggtgggactaactttctctaat 21300074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 21617924 - 21617958
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  21617924 aatctaaggtaagggtgggactaactttctctaat 21617958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 660841 - 660785
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagg 325  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||| ||||| |||||||    
T  660841 ctaaggtaaggg-gggactagctttctctaataaggggttgtataattctgaaaaagg 660785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 20566608 - 20566568
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  20566608 tcaatcaatctaaggtaagggtgagactaactttctctaat 20566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 36508633 - 36508697
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||| |||||||||||||||||  |  ||||||||||||| |||| || |||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaaca 36508697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 17011781 - 17011750
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  17011781 ctaaggtaagggtgggactaactttctctaat 17011750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 266090 - 266060
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  266090 taaggtaagggtgggactaactttctctaat 266060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 1626767 - 1626815
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaata 164  Q
    |||||||||  |||||| |||||||||||| |||||||||||||||||||    
T  1626767 ttggaataagggagaatatgttaggtttat-aaaagagaggttaggaata 1626815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 30616663 - 30616602
Alignment:
Q  272 ggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||| ||||||||||||  |  ||||||||||||| |||| || |||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaaatggatttaaca 30616602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 20313592 - 20313556
Alignment:
Q  1 taattgtgaagtgtgatattgttgtggtatgtgttgg 37  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  20313592 taattgcgaagtgtgatattgtcgtggtatgtgttgg 20313556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 21404151 - 21404107
Alignment:
Q  255 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| |||||||||||||||||| |||||||||| |||| ||||    
T  21404151 gaatttaaccaatctaaggtaaggatgggactaaccttctttaat 21404107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 1e-45; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 180 - 333
Target Start/End: Original strand, 28344899 - 28345052
Alignment:
Q  180 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaaggg 279  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||||||||| | |||||| | |||| || |||||||||||| ||||||| ||||||    
T  28344899 tagaaactgcttttgggagaaaaatggagaaagtgagaagtcagagaagagaagaggagcaaatatgtacagtccgaattcaacctatctaagataaggg 28344998  T
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    || ||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  28344999 tgtgactagctttctctaataatgggctgtatgattctaaaaaggggtttaaca 28345052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 174 - 333
Target Start/End: Complemental strand, 23801649 - 23801484
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgag---caagtttgtagagcccgaattcaacca----a 266  Q
    ||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||| | |||   |||| |||||||| || ||||||| ||    |    
T  23801649 aatacgtagaaactgattt-gggagaaaaagggagaaagtgagaagtcagagaagagaagaagaggagcaagcttgtagagtccaaattcaatcatctaa 23801551  T
Q  267 tctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23801550 tctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 23801484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 115 - 332
Target Start/End: Complemental strand, 21369511 - 21369282
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtg 214  Q
    |||||||||  || |||||||||||| |||||| ||||||||||||||||||||   | ||||| ||||||||| ||| |||||||||| ||||||||||    
T  21369511 ttggaataagggataatgtgttaggtgtataaatagagaggttaggaatagagaatgagaatacatagaaactgtttttgggagaaaaaaggagaaagtg 21369412  T
Q  215 agaggtcagagaag--------------agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaata 300  Q
    ||| ||||||||||              |||| ||||||||  |||||||| ||||  ||| | ||||||||||||||||||||| | |||||||||| |    
T  21369411 agaagtcagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccga--tcatctaatctaaggtaagggtgggacaagctttctctaaca 21369314  T
Q  301 atgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||| ||||| ||||||||||||||    
T  21369313 atgggttgtataattctgaaaaagggtttaac 21369282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 36734376 - 36734513
Alignment:
Q  194 gggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttc 293  Q
    |||||||||||||||||||||||| || |||||  |||| | ||||||| ||| |||| |||||||||| ||||||||||||||||||||| |||| |||    
T  36734376 gggagaaaaagggagaaagtgagaagttagagagaagaagaggagcaagcttgcagagtccgaattcaatcaatctaaggtaagggtgggattaac-ttc 36734474  T
Q  294 tctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||| ||| ||||||||| |||||||||||    
T  36734475 tctaataatgggtt-tataattctaaaatagggtttaaca 36734513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 183 - 299
Target Start/End: Complemental strand, 17307623 - 17307508
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 281  Q
    |||||||||| |||||||||||||||||||||||| ||||||| ||||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  17307623 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaaaatcgtagagaccga--tcatctaatctaaggtaagggtg 17307526  T
Q  282 ggactaactttctctaat 299  Q
    ||||||||||||||||||    
T  17307525 ggactaactttctctaat 17307508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 21315471 - 21315539
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  21315471 caatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 21315539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 21335261 - 21335329
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  21335261 caatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 21335329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 127 - 232
Target Start/End: Original strand, 14179573 - 14179679
Alignment:
Q  127 agaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag 225  Q
    ||||||||||||||||||||||||| ||||||| ||   |||  | | || |||||||||||||||| |||||||||||||||||||||||| || ||||    
T  14179573 agaatgtgttaggtttataaaaagaaaggttagaaagtcagaatagagaagacgtagaaactgcttttgggagaaaaagggagaaagtgagaagttagag 14179672  T
Q  226 aagagaa 232  Q
    |||||||    
T  14179673 aagagaa 14179679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 232
Target Start/End: Original strand, 14183311 - 14183417
Alignment:
Q  127 agaatgtgttaggtttataaaaagagaggttaggaa-tagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag 225  Q
    ||||||||||||||||||||||||| ||||||| || |  | | | | ||||||||||||||||||| ||||||||||||||||||||| || ||||| |    
T  14183311 agaatgtgttaggtttataaaaagaaaggttagaaagtcaaaatagagaatacgtagaaactgcttttgggagaaaaagggagaaagtgggaagtcagtg 14183410  T
Q  226 aagagaa 232  Q
    || ||||    
T  14183411 aaaagaa 14183417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 23610679 - 23610615
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||    
T  23610679 ctaaggtaagggtgggactagctttctctaataatgggttgtataattatgaaaaatggtttaac 23610615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 265 - 323
Target Start/End: Original strand, 149497 - 149555
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 323  Q
    |||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||    
T  149497 aatctaaggtaagggtggaactagctttctctaataatgagttgtataattctaaaaaa 149555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 23610830 - 23610745
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 202  Q
    |||||||||  |||||| |||||||||||||||  ||||||||||||||||||| |||||||||||  |||| | ||| |||||||||    
T  23610830 ttggaataagggagaatatgttaggtttataaa--gagaggttaggaatagagaaacataatacgtgaaaacagtttttgggagaaaa 23610745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 45528715 - 45528635
Alignment:
Q  150 gagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    |||||||||||||||||||| || || ||||| |||| | ||| ||||||||||  |||||||||||| ||||||||||||||    
T  45528715 gagaggttaggaatagagagtcagaacacgtaaaaacagtttttgggagaaaaa--gagaaagtgagaagtcagagaagagaa 45528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 45536109 - 45536029
Alignment:
Q  150 gagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    |||||||||||||||||||| || || ||||| |||| | ||| ||||||||||  |||||||||||| ||||||||||||||    
T  45536109 gagaggttaggaatagagagtcagaacacgtaaaaacagtttttgggagaaaaa--gagaaagtgagaagtcagagaagagaa 45536029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 19647448 - 19647388
Alignment:
Q  109 gcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag 169  Q
    |||||||||||||||  |||||||||||||||| | || | ||||||||||||||||||||    
T  19647448 gcaaaattggaataagggagaatgtgttaggttaagaataggagaggttaggaatagagag 19647388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 20005839 - 20005919
Alignment:
Q  150 gagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    |||||||||||||||||||  ||||| ||||| |||| | ||  ||||||||||  |||||||||||| ||||||||||||||    
T  20005839 gagaggttaggaatagagatgcataacacgtaaaaacagtttctgggagaaaaa--gagaaagtgagaagtcagagaagagaa 20005919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 24516243 - 24516208
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  24516243 caatctaaggtaagggtgggactaactttctctaat 24516208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 27852725 - 27852690
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  27852725 caatctaaggtaagggtgggactaactttctctaat 27852690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 3539893 - 3539859
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  3539893 aatctaaggtaagggtgggactaactttctctaat 3539859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 22502027 - 22501993
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  22502027 aatctaaggtaagggtgggactaactttctctaat 22501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 22509961 - 22509927
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  22509961 aatctaaggtaagggtgggactaactttctctaat 22509927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 25142260 - 25142226
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||||||    
T  25142260 aatctaaggtaagggtgggactaactttctctaat 25142226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 357934 - 357885
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||||    
T  357934 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattct 357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 27852802 - 27852765
Alignment:
Q  195 ggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27852802 ggagaaaaagggagaaagtgagaagtcagagaagagaa 27852765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 45535991 - 45535947
Alignment:
Q  255 gaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| ||||||||||||||||||||||||||||| |||| ||||    
T  45535991 gaatttaaccaatctaaggtaagggtgggactaaccttctttaat 45535947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Original strand, 149633 - 149672
Alignment:
Q  399 aagagtagctaatccgatgaattaaggtaataagtggtgt 438  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  149633 aagagtaggtaatccgatgaattaaggtaataattggtgt 149672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 331
Target Start/End: Original strand, 20005958 - 20006032
Alignment:
Q  256 aattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    |||| ||||||||||||||||||||||||||| | |||| |||| ||| | | ||| ||||| |||||||||||||    
T  20005958 aatttaaccaatctaaggtaagggtgggactagccttctttaatcatgag-tctataattctgaaaaagggtttaa 20006032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 21080968 - 21080999
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  21080968 ctaaggtaagggtgggactaactttctctaat 21080999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 40912373 - 40912342
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  40912373 ctaaggtaagggtgggactaactttctctaat 40912342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 2523747 - 2523777
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  2523747 taaggtaagggtgggactaactttctctaat 2523777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 5031129 - 5031159
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaat 5031159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 24780840 - 24780870
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaat 24780870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 34491239 - 34491304
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaa-taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||| ||| |||||| ||| | ||||||| ||||| |||||||||||||||    
T  34491239 ctaaggtaagggtgggactagctt-ctctaaataacgagttgtataattctgaaaaagggtttaaca 34491304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 289
Target Start/End: Complemental strand, 45528597 - 45528563
Alignment:
Q  255 gaattcaaccaatctaaggtaagggtgggactaac 289  Q
    ||||| |||||||||||||||||||||||||||||    
T  45528597 gaatttaaccaatctaaggtaagggtgggactaac 45528563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 22695359 - 22695322
Alignment:
Q  195 ggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    ||||||||||||||||||||||| || |||||||||||    
T  22695359 ggagaaaaagggagaaagtgagaagtaagagaagagaa 22695322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 174 - 333
Target Start/End: Original strand, 43692 - 43849
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    ||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||| | ||||||| |||||||| | |||||||||||||||||||    
T  43692 aatacgtagaaactgcttttgggatacaaagggagaaagtgagaagtcagagaagagaagaggagcaagcttgtagagtcggaattcaaccaatctaagg 43791  T
Q  274 taagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||| | ||||||||||||||||| ||| ||||| ||| |||||||||||    
T  43792 taagggtgggactagc-ttctctaataatgggtt-tataattctgaaatagggtttaaca 43849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 174 - 307
Target Start/End: Original strand, 39000 - 39132
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||| | ||||||| |||| ||| |||||||||||||||||||||    
T  39000 aatacgtagaaactgcttttgggagaaaaagggagaaagtgagaagtccgagaagagaagaggagcaagcttgttgagtccgaattcaaccaatctaagg 39099  T
Q  274 taagggtgggactaactttctctaataatgggtt 307  Q
    |||||||||||||| | |||||||||||||||||    
T  39100 taagggtgggactagc-ttctctaataatgggtt 39132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 37
Target Start/End: Original strand, 43521 - 43550
Alignment:
Q  8 gaagtgtgatattgttgtggtatgtgttgg 37  Q
    ||||||||||||||||||||||||||||||    
T  43521 gaagtgtgatattgttgtggtatgtgttgg 43550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 200 - 332
Target Start/End: Original strand, 15547 - 15678
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| ||||||||| ||||| | ||||||| || ||||| ||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  15547 aaaagggagaaagtgagaagtcagagaaagagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactaactt-ctctaa 15644  T
Q  299 taatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||| |||||||||||||||||||||||||||    
T  15645 taatggtttgtatgattctaaaaaagggtttaac 15678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 174 - 299
Target Start/End: Complemental strand, 1819099 - 1818974
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaagg 273  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||| | ||||||| || ||||| | |||||||||||||||||||    
T  1819099 aatacgtagaaactgtttttgggagaaaaggggagaaagtgagaagtcagagaagagaagaggagcaagcttatagagtctgaattcaaccaatctaagg 1819000  T
Q  274 taagggtgggactaactttctctaat 299  Q
    |||||||| ||||||| |||| ||||    
T  1818999 taagggtgagactaaccttctttaat 1818974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 330
Target Start/End: Complemental strand, 13285890 - 13285739
Alignment:
Q  180 tagaaactgctttcgggagaaaaagggagaaagtgagaggtcagag-aagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagg 278  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||||||| |||||||| | |||  || | ||||||||||||||    
T  13285890 tagaaactgctttcgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgaaaccatctaatctaaggtaagg 13285791  T
Q  279 gtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 330  Q
    ||||||||||| |||| |||| ||| |||  || ||||| |||| |||||||    
T  13285790 gtgggactaaccttctataatcatgagtttcataattctgaaaaggggttta 13285739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 183 - 332
Target Start/End: Original strand, 19825401 - 19825549
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtg 281  Q
    |||||||||| |||||||||||||||||||||||| ||||||||| ||||| | ||||||  | |||||| ||||  ||| | |||||||||||||||||    
T  19825401 aaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccga--tcatctaatctaaggtaagggtg 19825498  T
Q  282 ggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
     ||||| |||||||||||||||||||| || ||||| ||||||| ||||||    
T  19825499 agactagctttctctaataatgggttgcataattctgaaaaaggttttaac 19825549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 227 - 333
Target Start/End: Complemental strand, 10446311 - 10446205
Alignment:
Q  227 agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaaggg 326  Q
    |||||| | |||||||  ||||||| | ||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  10446311 agagaagaggagcaagcatgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtatgattctaaaaagggg 10446212  T
Q  327 tttaaca 333  Q
    |||||||    
T  10446211 tttaaca 10446205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 35057671 - 35057577
Alignment:
Q  194 gggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaa 288  Q
    |||||||||||||||||||||||| |||||||||||||| | ||||||  |||||||| || ||||||| ||||||||||||| |||||||||||    
T  35057671 gggagaaaaagggagaaagtgagaagtcagagaagagaagaggagcaaacttgtagagtccaaattcaatcaatctaaggtaatggtgggactaa 35057577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 29045392 - 29045259
Alignment:
Q  200 aaaagggagaaagtgagaggtcagaga-agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| |||||||| |||||| | ||||||| || |||||  || | ||| | | ||||||||||||||| ||||| ||||||||||    
T  29045392 aaaagggagaaagtgagaagtcagagagagagaagaggagcaagctt-tagagttcggaatcatctattctaaggtaagggtgagactagctttctctaa 29045294  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||| ||| | |||||||||||||||    
T  29045293 taatgggttgtataattttgaaaaagggtttaaca 29045259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 18982634 - 18982561
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||| ||||||||||||| ||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  18982634 tcaatcaatctaaggtaacggtgggattaactttatctaataatgggttgtataattctgaaaaagggtttaac 18982561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 21683074 - 21683138
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||    
T  21683074 ctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaaaagggtttaac 21683138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 23658145 - 23658078
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| ||||||||||||||    
T  23658145 aatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaaaagggtttaac 23658078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 21682916 - 21683016
Alignment:
Q  110 caaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggaga 209  Q
    |||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||  |||| | ||| ||||| ||||||||||    
T  21682916 caaatttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacaaaatatgtgaaaacagtttttgggag-aaaagggaga 21683014  T
Q  210 aa 211  Q
    ||    
T  21683015 aa 21683016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 332
Target Start/End: Original strand, 20410512 - 20410575
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||| | || ||||||||||||||||||||||| ||||| ||||||| ||||||    
T  20410512 taaggtaagggtggaaatagctttctctaataatgggttgtataattctgaaaaaggatttaac 20410575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 30673392 - 30673432
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  30673392 tcaaccaatctaaggtaagggtgggattaactttctctaat 30673432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 34140390 - 34140493
Alignment:
Q  204 gggagaaagtgagaggtcagagaag-agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 302  Q
    |||||||||||||| || ||||||| |||| | ||||||| ||||||||   | | ||| | ||||||||||||||||||||||| | ||||||||||||    
T  34140390 gggagaaagtgagaagttagagaaggagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggactagc-ttctctaataat 34140488  T
Q  303 gggtt 307  Q
    |||||    
T  34140489 gggtt 34140493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 34153006 - 34153109
Alignment:
Q  204 gggagaaagtgagaggtcagagaag-agaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataat 302  Q
    |||||||||||||| || ||||||| |||| | ||||||| ||||||||   | | ||| | ||||||||||||||||||||||| | ||||||||||||    
T  34153006 gggagaaagtgagaagttagagaaggagaagaggagcaagcttgtagagtttgtaatcatctaatctaaggtaagggtgggactagc-ttctctaataat 34153104  T
Q  303 gggtt 307  Q
    |||||    
T  34153105 gggtt 34153109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 15890707 - 15890742
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  15890707 caatctaaggtaagggtgggactaactttctctaat 15890742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 19167843 - 19167901
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||||||||||||||||||||||| | ||||||| ||||||| | |||||||| |||||    
T  19167843 tcaaccaatctaaggtaagggtggaattaactttgtctaatattaggttgtataattct 19167901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 19235185 - 19235127
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||||||||||||| ||||||||||| ||||||||||||||  | |||||||| |||||    
T  19235185 tcaaccaatctaagttaagggtgggattaactttctctaattttaggttgtataattct 19235127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 28948637 - 28948579
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| |||||||||||||||||| |||||||||||||||||  |  |||||||||||||    
T  28948637 tcaatcaatctaaggtaagggtgagactaactttctctaattctaagttgtatgattct 28948579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 15998942 - 15998878
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||| |||||||||||||||||  |  ||||||| ||||| |||||| |||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagtttaac 15998878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 18459366 - 18459296
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct-aaaaaagggtttaa 331  Q
    ||||||||||||||||||||||||||||| | || |||| ||| | | ||||||||| ||||||||||||||    
T  18459366 aaccaatctaaggtaagggtgggactaacctactttaatcatgag-tatatgattctgaaaaaagggtttaa 18459296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 24267906 - 24267871
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24267906 caatcaaaggtaagggtgggactaactttctctaat 24267871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 7828024 - 7827994
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaat 7827994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 317
Target Start/End: Complemental strand, 18585867 - 18585809
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| |||| || ||||||||||||||||||||||||||||  |  |||||||||||||    
T  18585867 tcaatcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattct 18585809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 18928737 - 18928703
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||| ||||||||||||||||||    
T  18928737 aatctaaggtaagggtaggactaactttctctaat 18928703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 23150287 - 23150317
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaat 23150317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 23658224 - 23658190
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgaga 217  Q
    |||||||||| ||||||||||||||||||||||||    
T  23658224 aaactgcttttgggagaaaaagggagaaagtgaga 23658190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Complemental strand, 34964133 - 34964099
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgaga 217  Q
    |||||||||| ||||||||||||||||||||||||    
T  34964133 aaactgcttttgggagaaaaagggagaaagtgaga 34964099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 22557422 - 22557358
Alignment:
Q  146 aaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 211  Q
    ||||||||||||||||||||||| | | ||||||| ||||| | ||| ||||| ||||||||||||    
T  22557422 aaaagagaggttaggaatagagaaatagaatacgtggaaacagtttttgggag-aaaagggagaaa 22557358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 19655192 - 19655261
Alignment:
Q  228 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| ||||||||||||| |||||||||||||||||    
T  19655192 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 19655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 27125438 - 27125507
Alignment:
Q  228 gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| ||||||||  |||||||| ||||  ||| | ||| ||||||||||||| |||||||||||||||||    
T  27125438 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 27125507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 200 - 333
Target Start/End: Original strand, 127273 - 127407
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    ||||| |||||||||||| ||||||||| ||||| | ||||||| |||||||| | | | ||| | ||||||||||||||||||||||| ||||||||||    
T  127273 aaaagagagaaagtgagaagtcagagaaagagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaa 127372  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||| ||||||||||||||||| ||||||||||    
T  127373 taatggattgtatgattctaaaaaggggtttaaca 127407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 71; Significance: 5e-32; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 73209 - 73075
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| |||| |||| ||||| | ||||||| |||||||| | |||  || | ||| ||||||||||||||||||||||||||||||    
T  73209 aaaagggagaaagtgagaagtcaaagaaagagaagaggagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaa 73110  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||| |||||||||||||||||| ||||||||||    
T  73109 taatgagttgtatgattctaaaaaggggtttaaca 73075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 333
Target Start/End: Complemental strand, 76059 - 75925
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||| ||||||||||||| ||||||||| ||||| |  || ||| |||||||| | |||  || | ||||||||||||||||||||||| ||||||| ||    
T  76059 aaaatggagaaagtgagaagtcagagaaagagaagagaagtaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactagctttctccaa 75960  T
Q  299 taatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||||||| ||||||||||    
T  75959 taatgggttgtatgattctaaaaaggggtttaaca 75925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 111416 - 111348
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  111416 aatctaaggtaagggtggggctagctttctctaataatgggttgtatgattctaaaaaggggtttaaca 111348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 197 - 333
Target Start/End: Original strand, 66000 - 66136
Alignment:
Q  197 agaaaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctc 295  Q
    ||||||||||||||||||||| |||| |||| ||||| |  |||||| || ||||| ||| | ||| | | |||||||||||||||||||||  |||||     
T  66000 agaaaaagggagaaagtgagaagtcatagaaagagaagagcagcaagctt-tagagtccggaatcatctattctaaggtaagggtgggactagatttctt 66098  T
Q  296 taataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  66099 taataatgggttgtataattctgaaaaagggtttaaca 66136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 328287 - 328318
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  328287 ctaaggtaagggtgggactaactttctctaat 328318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 299
Target Start/End: Complemental strand, 261 - 149
Alignment:
Q  187 tgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggact 286  Q
    |||||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||  |||||||| |||||||| |||| ||||||||||||||||||||    
T  261 tgcttttgggagaaaaatggagaaagtgagaagtcagtgaagagaagatgagcaaacttgtagagtccgaattcgaccattctaaggtaagggtgggact 162  T
Q  287 aactttctctaat 299  Q
    ||| |||| ||||    
T  161 aaccttctttaat 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 200 - 332
Target Start/End: Original strand, 3353 - 3485
Alignment:
Q  200 aaaagggagaaagtgagaggtcagaga-agagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||| | || ||||| | |||| | ||||||| || ||||| ||||| ||| | ||||||||||||||||||||||| ||||||||||    
T  3353 aaaagggagaaagtgaaaagttagagacaaagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactagctttctctaa 3451  T
Q  299 taatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||| ||||||||||||| ||||||||||||||    
T  3452 taatgcgttgtatgattctgaaaaagggtttaac 3485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 200 - 322
Target Start/End: Complemental strand, 8966 - 8843
Alignment:
Q  200 aaaagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaa 298  Q
    |||||||||||||||||| ||||||||| ||| ||| ||||||| |||||||| | ||| ||| | |||||||| |||||||||||||| |||| |||||    
T  8966 aaaagggagaaagtgagaagtcagagaaagaggaaaggagcaagcttgtagagtctgaaatcatctaatctaagttaagggtgggactagctttatctaa 8867  T
Q  299 taatgggttgtatgattctaaaaa 322  Q
    |||||| |||||||||||| ||||    
T  8866 taatggattgtatgattctgaaaa 8843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 40164 - 40095
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40164 caatctaaggtaaggatgcgactaactttctctaataatgggttgtatgattctaaaaaggggtttaaca 40095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 333
Target Start/End: Original strand, 6437 - 6569
Alignment:
Q  202 aagggagaaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaata 300  Q
    ||||||| |||||||| ||||||||| ||| | |  |||||| |||||||| | ||| ||| | |||||||||||| || ||||||| ||||||||||||    
T  6437 aagggagcaagtgagaagtcagagaaagaggagagaagcaagcttgtagagtctgaaatcatctaatctaaggtaaaggcgggactacctttctctaata 6536  T
Q  301 atgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||||| |||| ||||||||||    
T  6537 atgggttgtatgattctgaaaaggggtttaaca 6569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 2937 - 2870
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2937 aatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaagggtttaac 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 2306 - 2235
Alignment:
Q  262 accaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||    
T  2306 accaatctaaggtaagggtgggactagctttctataataatgggttgtataattctgaaaaagggtttaaca 2235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 232
Target Start/End: Complemental strand, 19426 - 19308
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag-acataatacgtagaaactgctttcgggagaaaaagggagaaagt 213  Q
    |||||||||  |||||||||||||||||||||||||| ||||||| ||   |||  | | |||||||||||||| |||| ||||||||||||||||||||    
T  19426 ttggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcagaatagagaatacgtagaaactacttttgggagaaaaagggagaaagt 19327  T
Q  214 gagaggtcagagaagagaa 232  Q
    |||| |||| |||||||||    
T  19326 gagaagtcatagaagagaa 19308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 19263 - 19196
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||| |||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  19263 aatctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 19196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 2077 - 2009
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2077 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 2009  T

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Target: scaffold0174 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 19912 - 19844
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| ||||||||||    
T  19912 aatctaaggtaagggtaggactagatttctctaataatgggttgtatgattctaaaaaggggtttaaca 19844  T

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Target: scaffold0174; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 330
Target Start/End: Complemental strand, 5588 - 5445
Alignment:
Q  186 ctgctttcgggagaaaaagggagaaa-gtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtggg 283  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||| ||||| | ||||||  | |||||| || |  ||| | |||||||||||||||||||    
T  5588 ctgcttttgggagaaaa-gggagaaaagtgagaagtcagagaaagagaagaggagcaatctcgtagagaccaa--tcatctaatctaaggtaagggtggg 5492  T
Q  284 actaactttctctaataatgggttgtatgattctaaaaaagggttta 330  Q
    |||| ||||||||||||||| ||||||| ||||| ||||||||||||    
T  5491 actacctttctctaataatgagttgtataattctgaaaaagggttta 5445  T

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Target: scaffold0174; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 11668 - 11604
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||| ||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||    
T  11668 taagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaaaagggtttaaca 11604  T

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Target: scaffold0005 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 186191 - 186259
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  186191 caatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaaaagggtttaac 186259  T

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Target: scaffold0220 (Bit Score: 52; Significance: 1e-20; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 265 - 332
Target Start/End: Complemental strand, 14005 - 13938
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||||    
T  14005 aatctaaggtaagggtgggactagctttctctaataatgggttgtaaaattctgaaaaagggtttaac 13938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 20007 - 19976
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  20007 ctaaggtaagggtgggactaactttctctaat 19976  T

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Target: scaffold0220; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 14084 - 14052
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtga 215  Q
    |||||||||| ||||||||||||||||||||||    
T  14084 aaactgcttttgggagaaaaagggagaaagtga 14052  T

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Target: scaffold0061 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 331
Target Start/End: Original strand, 14526 - 14648
Alignment:
Q  209 aaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggtt 307  Q
    ||||||||| |||| |||| ||||| | ||||||| || ||||| ||| | ||| | ||||||||||||||||| ||||| |||||||||||||||||||    
T  14526 aaagtgagaagtcaaagaaagagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggtt 14624  T
Q  308 gtatgattctaaaaaagggtttaa 331  Q
    |||| ||||| |||||||||||||    
T  14625 gtataattctgaaaaagggtttaa 14648  T

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Target: scaffold0061; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 209 - 331
Target Start/End: Original strand, 23584 - 23706
Alignment:
Q  209 aaagtgagaggtcagagaa-gagaaaatgagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggtt 307  Q
    ||||||||| |||| |||| ||||| | ||||||| || ||||| ||| | ||| | ||||||||||||||||| ||||| |||||||||||||||||||    
T  23584 aaagtgagaagtcaaagaaagagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggtt 23682  T
Q  308 gtatgattctaaaaaagggtttaa 331  Q
    |||| ||||| |||||||||||||    
T  23683 gtataattctgaaaaagggtttaa 23706  T

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Target: scaffold0282 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 19165 - 19099
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 181  Q
    |||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19165 ttggaataagggagaatatgttaggtttataaaaagagaggttaggaatagagaaacataatacgta 19099  T

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Target: scaffold0414 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 11160 - 11221
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 330  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  11160 taaggtaaggatgggactagctttctctaataatgggttgtatgattctaaaaaggggttta 11221  T

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Target: scaffold0007 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 16409 - 16482
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||| |||||||||||||||||| || ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  16409 tcaatcaatctaaggtaagggtgagattaactttatctaataatgggttgtataattctgaaaaagggtttaac 16482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 18691 - 18762
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggttta 330  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  18691 tcaaccaatctaaggtgagggtgggattaactttctctaataatgagttgtataattcttaaaaacggttta 18762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 101 - 333
Target Start/End: Complemental strand, 11180 - 10936
Alignment:
Q  101 gctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagag-agacataatacgtagaaactgctttcgggaga 199  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||||| ||||||| ||   || | | | |||||||||||||||||||  |||||    
T  11180 gctgaggggcagaataggaataagggagaatgtgttaggtttataaaaagaaaggttagaaagtcagaatagagaatacgtagaaactgctttttggaga 11081  T
Q  200 aaaagggagaaagtgagaggtcagagaagagaa-aat-------------gagcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggac 285  Q
    |||||||||||| ||  | | |||||||||||| |||             ||||||  |||||||  | ||  ||| | ||| |||||||||||||| ||    
T  11080 aaaagggagaaaatggtaagccagagaagagaagaatcttgtgagaagaggagcaatcttgtagaatctga--tcatctaatataaggtaagggtggaac 10983  T
Q  286 taactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||    
T  10982 tagctttctctaataatgggttgtatgattct-aaaaagggtttaaca 10936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 8344 - 8286
Alignment:
Q  101 gctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttag 159  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||||| |||||||    
T  8344 gctgaggggcagaataggaataagggagaatgtgttaggtttataaaaagaaaggttag 8286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 15536 - 15478
Alignment:
Q  101 gctgaggagcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttag 159  Q
    ||||||| ||| ||| |||||||  |||||||||||||||||||||||||| |||||||    
T  15536 gctgaggggcagaataggaataagggagaatgtgttaggtttataaaaagaaaggttag 15478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 174 - 333
Target Start/End: Original strand, 5520 - 5678
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagccc-gaattcaaccaatctaag 272  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| |||| ||||||||| | | | ||| |||||||     | |||||| |||||||||    
T  5520 aatacgtagaaacgacttttgggagaaaaatggagaaagtgagaagtcacagaagagaagaagggaaagcttgtagaatttaggattcaatcaatctaag 5619  T
Q  273 gtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||||||| | ||||||||||||||||| ||| ||||| ||| ||| |||||||    
T  5620 gtaagggtgggactagc-ttctctaataatgggtt-tataattctgaaataggatttaaca 5678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 18328 - 18264
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  18328 ctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaaaagggtttaac 18264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 18469 - 18415
Alignment:
Q  126 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgta 181  Q
    |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  18469 gagaatatgttaggtttataaaa-gagaggttaggaatagagaaacataatacgta 18415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 67178 - 67143
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||| ||||||||||||||||||||||    
T  67178 caatctaaggtaaaggtgggactaactttctctaat 67143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 8742 - 8805
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtt 328  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||    
T  8742 aatctaaggtaagggtgagactagcttactctaataatgggttgtatgattctaaaaaggggtt 8805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 5685 - 5620
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattct--aaaaaagggtttaac 332  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||  |||||||||||||||    
T  5685 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaaaagggtttaac 5620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 9027 - 8962
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    |||||||||  |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||    
T  9027 ttggaataagggagaatatgtgaggtttataaaaagagaggttaggaatagagaaacataatacgt 8962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 33649 - 33565
Alignment:
Q  126 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaa 211  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||  |||| | ||| ||||| ||||||||||||    
T  33649 gagaatatgttaggtttataaaaagagaggttaggaatagagaaacaaaatacgtgaaaacagattttgggag-aaaagggagaaa 33565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 33516 - 33476
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  33516 tcaatcaatctaaggtaagggtgggactaaccttctttaat 33476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 17516 - 17584
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||| |||||| |||| ||||||||||| |||||| ||||| ||||||||||||||    
T  17516 caatctaaggtaagggtcggactagctttttctaataatggattgtataattctgaaaaagggtttaac 17584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 23754 - 23710
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaa 227  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||    
T  23754 aaacggcttttgggagaaaaagggagaaagtgagaagtcagagaa 23710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 1128 - 1065
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||| ||||| |||||||||||||||| |||||| ||||| ||||||||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaaaagggtttaac 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 40051 - 40106
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaaga 229  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  40051 aatatgtagaaactgcttttgggagaaaaagggagaaagtgagaagtcagagaaga 40106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 23587 - 23527
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtt 328  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | |||||||| |||||    
T  23587 ctaaggtaagggtaggactagctttctctaataatgggttgtataaatctaaaaaggggtt 23527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 40153 - 40226
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggt-tgt-atgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||||||||| ||||||||| ||| || | | || ||||||||||||||||||||    
T  40153 aaccaatctaaggtaagggtgggactaaccttctctaatcatgagtatataataattctaaaaaagggtttaac 40226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 269 - 323
Target Start/End: Original strand, 2454 - 2508
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaa 323  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  2454 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaaaa 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 9785 - 9839
Alignment:
Q  126 gagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||    
T  9785 gagaatatgttaggtttataaaaagagaggttaggaatagagaaacagaatacgt 9839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 26789 - 26716
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||| ||||||| ||||||||||||| ||||||||||||||  | |||||||| ||||| ||||||||||||||    
T  26789 tcaatcaatctacggtaagggtgggattaactttctctaattttaggttgtataattctgaaaaagggtttaac 26716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 23814 - 23754
Alignment:
Q  109 gcaaaattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag 169  Q
    |||||||||||||||  |||||||||||||||| | || | ||||||||||||||||||||    
T  23814 gcaaaattggaataagggagaatgtgttaggttaagaataggagaggttaggaatagagag 23754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 331
Target Start/End: Complemental strand, 23730 - 23604
Alignment:
Q  205 ggagaaagtgagaggtcagagaagagaaaatgagcaagtttgtagagcccgaa-ttcaaccaatctaaggtaagggtgggactaactttctctaataatg 303  Q
    ||||||||||||| |||||||| ||||| | | | ||| |||||||  || || ||  ||||||||||||||||||||||||| || |||| |||| |||    
T  23730 ggagaaagtgagaagtcagagatgagaagaagggaaagcttgtagaatccaaaatttgaccaatctaaggtaagggtgggactgaccttctttaatcatg 23631  T
Q  304 ggttgtatgattctaaaaaagggtttaa 331  Q
     | | ||| |||||||||||||||||||    
T  23630 ag-tatataattctaaaaaagggtttaa 23604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 5304 - 5368
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||||||||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagttgtataattcttaaaaagggtttaac 5368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 5102 - 5160
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||    
T  5102 aatacgtagaaacaacttttgggagaaaaatggagaaagtgagaagtcagagaagagaa 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 96458 - 96386
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    ||||||||||| |||| ||||||||||||||||||||||  || ||||||||||||| |||| || |||||||    
T  96458 aaccaatctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaaca 96386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1437 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1437
Description:

Target: scaffold1437; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 183 - 270
Alignment:
Q  115 ttggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaa 202  Q
    |||||||||  || ||| |||| ||||||||||||||||||||||||||||||| ||| |||||||  |||| || || |||||||||    
T  183 ttggaataagggataatatgtttggtttataaaaagagaggttaggaatagagaaacagaatacgtgaaaacagcgtttgggagaaaa 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 269 - 332
Target Start/End: Complemental strand, 4988 - 4926
Alignment:
Q  269 taaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||| |||||||||||||| |||||||| |||||  |||||||||||||    
T  4988 taaggtaagggtgggactagctttctctaataat-ggttgtataattctgtaaaagggtttaac 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 17936 - 18003
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    |||||||||||||||||||||||||||||||||||  |  ||||||| ||||| ||||||| ||||||    
T  17936 aatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaaggatttaac 18003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 2094 - 2152
Alignment:
Q  174 aatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    |||||||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||    
T  2094 aatacgtagaaacaacttttgggagaaaaatggagaaagtgagaagtcagagaagagaa 2152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 2199 - 2263
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||| ||||||||||  |  ||||||| ||||| ||||||||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaaagggtttaac 2263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 7506 - 7575
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    ||||||||||||||||||||||||||||| |||| |||| ||| | | ||||||||| |||||||||||||    
T  7506 aaccaatctaaggtaagggtgggactaaccttctttaattatgag-tatatgattctgaaaaagggtttaa 7575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 4615 - 4562
Alignment:
Q  127 agaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgt 180  Q
    ||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  4615 agaatatgttaggtttttaaaaagagaggttaggaatagagaaacagaatacgt 4562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 299
Target Start/End: Complemental strand, 3402 - 3226
Alignment:
Q  113 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaag 212  Q
    |||||||||||  |||||||||||||||| | || | |||||||||||||||||||| || || ||||| |||| | |||           || | ||||    
T  3402 aattggaataagggagaatgtgttaggttaagaatatgagaggttaggaatagagagtcagaacacgtaaaaacagtttt-----------ggaaaaaag 3314  T
Q  213 tgagaggtcagagaagagaaaatgagcaagtttgtag-agcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| |||||||||||||| | | | ||| |||||| |  | ||||| ||||||||||||||||||||||||||||| |||| ||||    
T  3313 tgagaagtcagagaagagaagaagggaaagcttgtagaattcagaatttaaccaatctaaggtaagggtgggactaaccttctttaat 3226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 18636 - 18681
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaataatgggttgta 310  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  18636 aatctaaggtaagggtgggactagctttctctaataatgagttgta 18681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 46003 - 46055
Alignment:
Q  178 cgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagag 230  Q
    |||| |||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  46003 cgtacaaactgcttttgggagataaagggagaaagtgagaagtcagagaagag 46055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 2949 - 2893
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||||||||||||||||||||||| ||||||||||||||  | |||||||| |||||    
T  2949 aaccaatctaaggtaagggtgggattaactttctctaattttaggttgtataattct 2893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 331
Target Start/End: Complemental strand, 6480 - 6408
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    |||| |||||||||||||||||  ||||| ||||||||||||||| ||||| | ||||| |||||||| ||||    
T  6480 tcaatcaatctaaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaaaagggattaa 6408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 331
Target Start/End: Original strand, 38381 - 38503
Alignment:
Q  209 aaagtgagaggtcagagaagagaa-aatgagcaagtttgtagagccc-gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggt 306  Q
    ||||||||| |||||||||||||| |||| | ||| |||||||  || ||||| ||||||||||||||||||||| ||||||| |||| |||| ||| |     
T  38381 aaagtgagaagtcagagaagagaagaatg-gaaagcttgtagaatccagaatttaaccaatctaaggtaagggtgtgactaaccttctttaatcatgag- 38478  T
Q  307 tgtatgattctaaaaaagggtttaa 331  Q
    | ||| ||||| |||||||||||||    
T  38479 tatataattctgaaaaagggtttaa 38503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 195 - 160
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  195 caatctaaggtaagggtgggactaactttctctaat 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 4704 - 4739
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  4704 caatctaaggtaagggtgggactaactttctctaat 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 13387 - 13422
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  13387 caatctaaggtaagggtgggactaactttctctaat 13422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0488 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 12630 - 12580
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaaa 233  Q
    |||||||||| |||||| |||||| |||||||||| |||||||||||||||    
T  12630 aaactgcttttgggagataaagggcgaaagtgagaagtcagagaagagaaa 12580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 426 - 373
Alignment:
Q  280 tgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaaca 333  Q
    |||||||| ||||||||||  ||||||||||| ||||| |||||||||||||||    
T  426 tgggactagctttctctaaagatgggttgtataattctgaaaaagggtttaaca 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 1937 - 2012
Alignment:
Q  255 gaattcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaa 331  Q
    ||||| |||||||||||||||| |||||||||||| |||| |||| ||| | | ||| ||||| |||||||||||||    
T  1937 gaatttaaccaatctaaggtaacggtgggactaaccttctttaatcatgag-tctataattctgaaaaagggtttaa 2012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 1819 - 1899
Alignment:
Q  150 gagaggttaggaatagagagacataatacgtagaaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    ||||||||| |||||||||| || || ||||| |||| | ||| ||||||||||   ||||||||||| ||||||||||||||    
T  1819 gagaggttaagaatagagagtcagaacacgtaaaaacagtttttgggagaaaaaa--agaaagtgagaagtcagagaagagaa 1899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 19815 - 19775
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  19815 tcaaccaatctaaggtaagggtgagactgactttctctaat 19775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 6284 - 6328
Alignment:
Q  133 tgttaggtttataaaaagagaggttaggaatagagagacataata 177  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  6284 tgttaggcttataaaaagagaggttaggaatagagaaacagaata 6328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 21668 - 21616
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattc 316  Q
    |||||||||||||||||||||||| |||||||||||  |  ||||||||||||    
T  21668 caatctaaggtaagggtgggactagctttctctaattctaagttgtatgattc 21616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 29568 - 29603
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29568 caatctaaggtaagggtgggactaactttctataat 29603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 49791 - 49751
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  49791 tcaaccaatctaaggtaagggtgggactaaccttctttaat 49751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 106046 - 106098
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaataatgggttgtatgattc 316  Q
    |||||||||||||||||| |||||||||||||||||  |  ||||||||||||    
T  106046 caatctaaggtaagggtgtgactaactttctctaattctaagttgtatgattc 106098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 325
Target Start/End: Original strand, 1348 - 1414
Alignment:
Q  258 ttcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagg 325  Q
    |||| ||||||||||||||||||||||||||| |||| |||| ||| ||| ||| ||||| |||||||    
T  1348 ttcatccaatctaaggtaagggtgggactaaccttctttaat-atgagttctataattctgaaaaagg 1414  T

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Target: scaffold0628 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 296
Target Start/End: Original strand, 1054 - 1085
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctct 296  Q
    ||||||||||||||||||||||||||||||||    
T  1054 aatctaaggtaagggtgggactaactttctct 1085  T

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Target: scaffold0515 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 5082 - 5051
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaat 5051  T

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Target: scaffold0436 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 9013 - 8982
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  9013 ctaaggtaagggtgggactaactttctctaat 8982  T

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Target: scaffold0334 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 575 - 540
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  575 caatctaaggtaagggtgagactaactttctctaat 540  T

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Target: scaffold0306 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 5082 - 5051
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  5082 ctaaggtaagggtgggactaactttctctaat 5051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 3239 - 3204
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3239 caatctaaggtaagggttggactaactttctctaat 3204  T

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Target: scaffold0138 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 21150 - 21119
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  21150 ctaaggtaagggtgggactaactttctctaat 21119  T

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Target: scaffold0138; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 34165 - 34134
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  34165 ctaaggtaagggtgggactaactttctctaat 34134  T

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Target: scaffold0125 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 33612 - 33659
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcagagaagag 230  Q
    ||||||||||  ||||| ||||||||||||||||| ||||||||||||    
T  33612 aaactgcttttaggagataaagggagaaagtgagaagtcagagaagag 33659  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Complemental strand, 35547 - 35512
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||| |||||||||||||||||    
T  35547 caatctaaggtaagggtgagactaactttctctaat 35512  T

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Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 322
Target Start/End: Original strand, 26624 - 26687
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaa 322  Q
    ||||||||||||| |||||||||||| ||||||||| ||||  | |||||||| ||||| ||||    
T  26624 tcaaccaatctaaagtaagggtgggattaactttctttaattttaggttgtataattctgaaaa 26687  T

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Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 5044 - 5091
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgatt 315  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||    
T  5044 ctaaggtaagggtgggactaactttctctaattctaagttgtatgatt 5091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 10754 - 10801
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaataatgggttgtatgatt 315  Q
    ||||||||||||||||||||||||||||||||  |  |||||||||||    
T  10754 ctaaggtaagggtgggactaactttctctaattctaagttgtatgatt 10801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 34421 - 34361
Alignment:
Q  237 agcaagtttgtagagcccgaattcaaccaatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||| ||||||||| ||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  34421 agcaattttgtagagtccga--tcatctaatttaaggtaagggtgggactaactttctctaat 34361  T

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Target: scaffold0071 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Complemental strand, 15325 - 15294
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  15325 ctaaggtaagggtgggactaactttctctaat 15294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 59648 - 59718
Alignment:
Q  261 aaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattctaaaaaagggtttaac 332  Q
    ||||||||||||||||||||||| ||||| |||| |||| ||| | | ||| ||||| ||||||||||||||    
T  59648 aaccaatctaaggtaagggtgggtctaaccttctttaatcatgag-tatataattctgaaaaagggtttaac 59718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 59511 - 59567
Alignment:
Q  113 aattggaataaatgagaatgtgttaggtttataaaaagagaggttaggaatagagag 169  Q
    |||||||||||  |||||||||||||||| | || | ||||||| ||||||||||||    
T  59511 aattggaataagggagaatgtgttaggttaagaataggagaggtgaggaatagagag 59567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 69852 - 69883
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  69852 ctaaggtaagggtgggactaactttctctaat 69883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 112961 - 112996
Alignment:
Q  264 caatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||| ||||||||||||||||||||||||||    
T  112961 caatctaagataagggtgggactaactttctctaat 112996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 299
Target Start/End: Original strand, 117806 - 117837
Alignment:
Q  268 ctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||||||||||||||||||    
T  117806 ctaaggtaagggtgggactaactttctctaat 117837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 1257 - 1227
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  1257 taaggtaagggtgggactaactttctctaat 1227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 468 - 498
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  468 taaggtaagggtgggactaactttctctaat 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 2611 - 2577
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    |||||| ||||||||||||||||||||||||||||    
T  2611 aatctacggtaagggtgggactaactttctctaat 2577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 196 - 226
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaat 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 6675 - 6733
Alignment:
Q  259 tcaaccaatctaaggtaagggtgggactaactttctctaataatgggttgtatgattct 317  Q
    |||| |||| || ||||||||||||||||||||||||||||  |  |||||||||||||    
T  6675 tcaatcaatatatggtaagggtgggactaactttctctaattctaagttgtatgattct 6733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Complemental strand, 58798 - 58768
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  58798 taaggtaagggtgggactaactttctctaat 58768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 78185 - 78215
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  78185 taaggtaagggtgggactaactttctctaat 78215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Original strand, 61844 - 61878
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||| |||||||||||||||||    
T  61844 aatctaaggtaagggtgagactaactttctctaat 61878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 16649 - 16683
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgaga 217  Q
    |||||||||| ||||||||||||||||||||||||    
T  16649 aaactgcttttgggagaaaaagggagaaagtgaga 16683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 299
Target Start/End: Original strand, 24131 - 24161
Alignment:
Q  269 taaggtaagggtgggactaactttctctaat 299  Q
    |||||||||||||||||||||||||||||||    
T  24131 taaggtaagggtgggactaactttctctaat 24161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 77743 - 77709
Alignment:
Q  265 aatctaaggtaagggtgggactaactttctctaat 299  Q
    ||||||||||||||||| |||||||||||||||||    
T  77743 aatctaaggtaagggtgagactaactttctctaat 77709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 5631 - 5590
Alignment:
Q  183 aaactgctttcgggagaaaaagggagaaagtgagaggtcaga 224  Q
    |||||||||| |||||||||||||||||||| ||| ||||||    
T  5631 aaactgcttttgggagaaaaagggagaaagtaagaagtcaga 5590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 8058 - 8021
Alignment:
Q  195 ggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    ||||||||||||||||||||||| || |||||||||||    
T  8058 ggagaaaaagggagaaagtgagaagtaagagaagagaa 8021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 5249 - 5286
Alignment:
Q  195 ggagaaaaagggagaaagtgagaggtcagagaagagaa 232  Q
    ||||||||||||||||||||||| || |||||||||||    
T  5249 ggagaaaaagggagaaagtgagaagtaagagaagagaa 5286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 438
Target Start/End: Original strand, 1971 - 2007
Alignment:
Q  402 agtagctaatccgatgaattaaggtaataagtggtgt 438  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  1971 agtagataatctgatgaattaaggtaataagtggtgt 2007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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