View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1622_low_8 (Length: 434)

Name: NF1622_low_8
Description: NF1622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1622_low_8
NF1622_low_8
[»] chr7 (35 HSPs)
chr7 (339-419)||(43100010-43100090)
chr7 (188-275)||(43100151-43100239)
chr7 (1-104)||(19329842-19329945)
chr7 (25-104)||(19436208-19436287)
chr7 (1-104)||(38267040-38267143)
chr7 (1-110)||(35137527-35137636)
chr7 (1-105)||(4999511-4999615)
chr7 (1-104)||(3434562-3434665)
chr7 (1-104)||(7389389-7389492)
chr7 (1-104)||(21234401-21234504)
chr7 (1-104)||(8080380-8080483)
chr7 (1-104)||(36361910-36362013)
chr7 (1-101)||(3783998-3784098)
chr7 (1-104)||(36362026-36362129)
chr7 (1-104)||(38837217-38837320)
chr7 (1-103)||(32951490-32951592)
chr7 (1-110)||(3694361-3694470)
chr7 (1-108)||(40846110-40846217)
chr7 (25-104)||(40957707-40957786)
chr7 (1-111)||(35468852-35468962)
chr7 (15-104)||(46374813-46374902)
chr7 (15-117)||(8238199-8238302)
chr7 (1-104)||(26296644-26296747)
chr7 (36-99)||(35522881-35522944)
chr7 (1-104)||(36208173-36208276)
chr7 (1-104)||(46033798-46033901)
chr7 (15-104)||(38044197-38044286)
chr7 (36-104)||(39255955-39256023)
chr7 (1-104)||(41423682-41423785)
chr7 (38-104)||(10343597-10343663)
chr7 (25-63)||(16374845-16374883)
chr7 (39-104)||(22343361-22343426)
chr7 (39-104)||(32564461-32564526)
chr7 (36-104)||(18207180-18207248)
chr7 (48-104)||(31735884-31735940)
[»] chr6 (19 HSPs)
chr6 (1-104)||(15832577-15832680)
chr6 (1-116)||(17598542-17598657)
chr6 (1-104)||(32869678-32869781)
chr6 (1-101)||(22880655-22880755)
chr6 (17-104)||(6209478-6209565)
chr6 (22-104)||(31109418-31109500)
chr6 (25-105)||(29857826-29857906)
chr6 (1-104)||(11427616-11427721)
chr6 (25-101)||(23128148-23128224)
chr6 (1-104)||(31110758-31110859)
chr6 (1-104)||(31976248-31976351)
chr6 (28-103)||(946377-946452)
chr6 (1-99)||(9379709-9379807)
chr6 (1-104)||(31953027-31953130)
chr6 (1-100)||(28536485-28536582)
chr6 (15-104)||(4231548-4231637)
chr6 (39-104)||(15508059-15508124)
chr6 (39-104)||(15990077-15990142)
chr6 (39-104)||(30341395-30341460)
[»] chr1 (29 HSPs)
chr1 (1-110)||(8346385-8346494)
chr1 (15-104)||(48716293-48716382)
chr1 (1-101)||(44548373-44548473)
chr1 (1-104)||(9474873-9474976)
chr1 (15-104)||(51898694-51898783)
chr1 (1-104)||(27564732-27564835)
chr1 (15-104)||(2581915-2582004)
chr1 (15-104)||(38632332-38632421)
chr1 (1-109)||(38595149-38595257)
chr1 (1-104)||(3000319-3000422)
chr1 (1-104)||(41758805-41758908)
chr1 (34-104)||(49811557-49811627)
chr1 (27-104)||(37649198-37649275)
chr1 (1-105)||(43131-43235)
chr1 (1-104)||(32813247-32813350)
chr1 (1-104)||(47452317-47452420)
chr1 (15-101)||(26274435-26274521)
chr1 (1-104)||(45044557-45044660)
chr1 (1-104)||(50630458-50630561)
chr1 (1-78)||(13414787-13414864)
chr1 (15-103)||(11152389-11152476)
chr1 (12-104)||(23597099-23597191)
chr1 (12-63)||(44334178-44334229)
chr1 (36-97)||(26440741-26440802)
chr1 (36-104)||(37926470-37926538)
chr1 (15-109)||(5959011-5959105)
chr1 (39-104)||(41608528-41608593)
chr1 (4-61)||(48489343-48489400)
chr1 (39-104)||(50591035-50591100)
[»] chr8 (26 HSPs)
chr8 (1-107)||(12831044-12831150)
chr8 (15-104)||(37038479-37038568)
chr8 (1-104)||(14547922-14548025)
chr8 (15-109)||(504132-504226)
chr8 (1-104)||(10284628-10284731)
chr8 (1-104)||(15197333-15197436)
chr8 (1-104)||(34012293-34012396)
chr8 (1-104)||(40423940-40424043)
chr8 (1-103)||(5957831-5957933)
chr8 (1-104)||(23122594-23122697)
chr8 (1-104)||(15048179-15048281)
chr8 (1-104)||(44507084-44507187)
chr8 (25-104)||(1179961-1180040)
chr8 (1-99)||(10621084-10621182)
chr8 (22-104)||(14055610-14055692)
chr8 (1-82)||(8841429-8841510)
chr8 (36-104)||(20074966-20075034)
chr8 (1-109)||(43414578-43414686)
chr8 (1-104)||(4854860-4854963)
chr8 (39-110)||(30479509-30479580)
chr8 (1-61)||(15258926-15258986)
chr8 (1-104)||(17443825-17443928)
chr8 (22-104)||(42221515-42221597)
chr8 (39-110)||(16056436-16056507)
chr8 (39-110)||(16383371-16383442)
chr8 (39-104)||(34307216-34307281)
[»] chr4 (29 HSPs)
chr4 (1-110)||(50052425-50052534)
chr4 (1-104)||(41236347-41236450)
chr4 (1-110)||(480444-480553)
chr4 (15-104)||(54473544-54473633)
chr4 (1-104)||(29239886-29239989)
chr4 (1-104)||(11511459-11511562)
chr4 (1-104)||(48183046-48183149)
chr4 (25-104)||(50526192-50526271)
chr4 (1-113)||(42044364-42044476)
chr4 (1-104)||(3481654-3481757)
chr4 (1-104)||(6034044-6034147)
chr4 (1-104)||(24995104-24995207)
chr4 (27-104)||(23608235-23608312)
chr4 (1-104)||(31910192-31910295)
chr4 (1-104)||(29234242-29234345)
chr4 (37-104)||(40574779-40574846)
chr4 (18-104)||(55475191-55475277)
chr4 (36-104)||(47104544-47104612)
chr4 (1-99)||(53352563-53352660)
chr4 (3-96)||(28480267-28480360)
chr4 (3-96)||(28481142-28481235)
chr4 (3-96)||(28482017-28482110)
chr4 (1-104)||(29977885-29977988)
chr4 (1-56)||(41823930-41823985)
chr4 (1-104)||(48647723-48647826)
chr4 (1-72)||(56300162-56300233)
chr4 (39-104)||(29547994-29548059)
chr4 (39-104)||(44536781-44536845)
chr4 (39-104)||(47986208-47986273)
[»] chr5 (25 HSPs)
chr5 (1-104)||(6679698-6679801)
chr5 (1-104)||(2740274-2740377)
chr5 (1-104)||(40145407-40145510)
chr5 (1-110)||(18520881-18520990)
chr5 (1-104)||(13811652-13811755)
chr5 (1-104)||(28177775-28177878)
chr5 (1-104)||(33149635-33149738)
chr5 (1-104)||(35785199-35785302)
chr5 (1-104)||(36732939-36733042)
chr5 (15-104)||(42414313-42414402)
chr5 (15-109)||(14831809-14831903)
chr5 (15-104)||(15409621-15409710)
chr5 (25-106)||(35943913-35943994)
chr5 (15-104)||(31008988-31009077)
chr5 (15-104)||(41470427-41470516)
chr5 (45-103)||(36875644-36875702)
chr5 (15-104)||(20073527-20073616)
chr5 (1-104)||(26720516-26720619)
chr5 (1-104)||(26990265-26990368)
chr5 (39-104)||(2252203-2252268)
chr5 (1-58)||(31132390-31132447)
chr5 (1-56)||(21370052-21370107)
chr5 (36-106)||(33825356-33825426)
chr5 (39-104)||(3921300-3921365)
chr5 (23-104)||(6260020-6260101)
[»] chr2 (28 HSPs)
chr2 (1-104)||(10249379-10249482)
chr2 (15-104)||(32505659-32505748)
chr2 (1-101)||(19930817-19930917)
chr2 (1-104)||(13438343-13438446)
chr2 (1-101)||(28863458-28863558)
chr2 (25-104)||(4060685-4060764)
chr2 (1-104)||(9058480-9058583)
chr2 (1-104)||(33436097-33436200)
chr2 (1-104)||(40701478-40701581)
chr2 (1-106)||(17473018-17473123)
chr2 (1-104)||(7465732-7465835)
chr2 (1-104)||(27864704-27864807)
chr2 (22-104)||(38882832-38882913)
chr2 (1-104)||(5574485-5574588)
chr2 (1-104)||(20700815-20700918)
chr2 (1-104)||(28381652-28381755)
chr2 (1-104)||(30915463-30915566)
chr2 (1-104)||(40613899-40614002)
chr2 (1-104)||(42257193-42257296)
chr2 (1-104)||(17820001-17820104)
chr2 (1-104)||(36168836-36168939)
chr2 (22-103)||(41575138-41575219)
chr2 (36-104)||(33436211-33436279)
chr2 (17-104)||(38273155-38273242)
chr2 (15-104)||(2533124-2533212)
chr2 (1-104)||(26891501-26891604)
chr2 (39-104)||(43490121-43490186)
chr2 (15-106)||(38732352-38732443)
[»] chr3 (30 HSPs)
chr3 (1-104)||(53982011-53982114)
chr3 (1-104)||(17470405-17470508)
chr3 (1-104)||(27714888-27714991)
chr3 (25-104)||(33118872-33118951)
chr3 (1-104)||(33644200-33644303)
chr3 (1-104)||(54868892-54868995)
chr3 (1-104)||(11347919-11348022)
chr3 (25-104)||(36707445-36707524)
chr3 (25-104)||(49607414-49607493)
chr3 (2-104)||(9562999-9563101)
chr3 (1-99)||(52629305-52629403)
chr3 (28-104)||(11095377-11095453)
chr3 (1-104)||(8076393-8076496)
chr3 (1-104)||(24699951-24700054)
chr3 (1-103)||(31456690-31456792)
chr3 (23-104)||(35536626-35536707)
chr3 (1-104)||(26141529-26141632)
chr3 (1-104)||(41189761-41189864)
chr3 (1-99)||(26754700-26754798)
chr3 (1-100)||(30801730-30801829)
chr3 (39-97)||(35093592-35093650)
chr3 (15-100)||(48587102-48587187)
chr3 (39-106)||(14623874-14623941)
chr3 (1-104)||(51419357-51419460)
chr3 (23-104)||(8956762-8956843)
chr3 (36-104)||(47531865-47531933)
chr3 (36-104)||(35965806-35965874)
chr3 (1-104)||(20764912-20765015)
chr3 (1-104)||(48375703-48375806)
chr3 (1-113)||(41080700-41080810)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-104)||(926-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-104)||(926-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (23-114)||(10128-10218)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-104)||(8860-8963)
[»] scaffold0237 (1 HSPs)
scaffold0237 (25-105)||(4028-4108)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-61)||(17097-17157)


Alignment Details
Target: chr7 (Bit Score: 81; Significance: 6e-38; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 339 - 419
Target Start/End: Complemental strand, 43100090 - 43100010
Alignment:
Q  339 aaccttaatataataaactttctcacaagtcataccctaaccctctcttaaacgctttgtctttaacccaatggcaacatc 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43100090 aaccttaatataataaactttctcacaagtcataccctaaccctctcttaaacgctttgtctttaacccaatggcaacatc 43100010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 188 - 275
Target Start/End: Complemental strand, 43100239 - 43100151
Alignment:
Q  188 gattaaggtgtatatacggtaatacgcgttcaaaactttctcctcttggtatact-aatcaattaaaagaacacaataactgtggtacg 275  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43100239 gattaaggtgtatatacggtaatacgcgttcaaaactttctcctcttggtatactaaatcaattaaaagaacacaataactgtggtacg 43100151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19329945 - 19329842
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||| ||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||    
T  19329945 aagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatt 19329846  T
Q  101 actc 104  Q
    ||||    
T  19329845 actc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 19436208 - 19436287
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||    
T  19436208 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38267143 - 38267040
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| ||| | |||||||||||||||    
T  38267143 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcatt 38267044  T
Q  101 actc 104  Q
    ||||    
T  38267043 actc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35137636 - 35137527
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | ||||||||| |||||||||||||||||||| | |||||||||||| ||||||| ||||||||| ||||||| | ||||||| |||||||    
T  35137636 aagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcatt 35137537  T
Q  101 actccttttt 110  Q
    |||| |||||    
T  35137536 actcattttt 35137527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4999511 - 4999615
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | ||||||||| |||||||||||||||||| ||| |||||||||||| ||||||| ||||||||| || |||| | |||||||||||||||    
T  4999511 aagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcatt 4999610  T
Q  101 actcc 105  Q
    |||||    
T  4999611 actcc 4999615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3434665 - 3434562
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || |||||||||||||||||||  ||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||    
T  3434665 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 3434566  T
Q  101 actc 104  Q
    ||||    
T  3434565 actc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7389492 - 7389389
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| |||||||  |||||||| ||||||| | |||||||||||||||    
T  7389492 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcatt 7389393  T
Q  101 actc 104  Q
    ||||    
T  7389392 actc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 21234504 - 21234401
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| || |||||| |||| || ||| ||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||||     
T  21234504 aagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcata 21234405  T
Q  101 actc 104  Q
    ||||    
T  21234404 actc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 8080380 - 8080483
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||| ||| | ||||||| ||||||||| ||||||| | |||||||||||||||    
T  8080380 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 8080479  T
Q  101 actc 104  Q
    ||||    
T  8080480 actc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36361910 - 36362013
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  |||||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||| | |||||||||||||||    
T  36361910 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcatt 36362009  T
Q  101 actc 104  Q
    ||||    
T  36362010 actc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3784098 - 3783998
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||| | |||||||||||||||    
T  3784098 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatt 3783999  T
Q  101 a 101  Q
    |    
T  3783998 a 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36362129 - 36362026
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  |||||||||||||||||||||| |||||||||||| ||||||| | ||||||  ||||||| | |||||||||||||||    
T  36362129 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcatt 36362030  T
Q  101 actc 104  Q
    ||||    
T  36362029 actc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38837320 - 38837217
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||| | |||  || ||||||||| ||||||| | |||||||||||||||    
T  38837320 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcatt 38837221  T
Q  101 actc 104  Q
    ||||    
T  38837220 actc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32951490 - 32951592
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||| | |||||||||||||||| ||| | |||||||||| ||||   |||||||||||||||    
T  32951490 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcatt 32951589  T
Q  101 act 103  Q
    |||    
T  32951590 act 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3694470 - 3694361
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||| ||||||||||||| |||||||||||| ||| ||| ||||||||||||||||| | ||| ||| |||||||    
T  3694470 aagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatt 3694371  T
Q  101 actccttttt 110  Q
    | || |||||    
T  3694370 attcattttt 3694361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40846110 - 40846217
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | | ||||||| |||||||  | ||||| ||| | |||||||||||||||||||  ||||||||| ||||||| ||||| ||||||||||     
T  40846110 aagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcata 40846209  T
Q  101 actccttt 108  Q
    ||||||||    
T  40846210 actccttt 40846217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 40957786 - 40957707
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||||||||||||||| |||||||||||| | |||||  |||||||| |||||||   |||||||||||||||||||    
T  40957786 tccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35468852 - 35468962
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | |||||||||||||||||| ||   || | | | |||||| ||||| ||||||||| ||||||| || |||| |||||||||||||||||    
T  35468852 aagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcatt 35468951  T
Q  101 actccttttta 111  Q
    |||| ||||||    
T  35468952 actctttttta 35468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 46374813 - 46374902
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| ||||||| ||| | |||||||| |||||||||||| ||| ||| ||||| ||| ||||||| |||||||||||||||| ||||    
T  46374813 ttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 8238302 - 8238199
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcaccta-aagatgtctatgtatcattactcctttttaaa 113  Q
    |||||| |||||||  ||||||| ||||| |||||||||||| ||||||| ||||||||| |||||| | | ||| |||||||||| |||| |||| |||    
T  8238302 ttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactcattttaaaa 8238203  T
Q  114 atag 117  Q
    ||||    
T  8238202 atag 8238199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26296747 - 26296644
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    ||||||||||  | |||||| |||||||  || | |||| ||| |||||| ||||||||| ||| ||| ||||||||||||| ||||||||||||||||     
T  26296747 aagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcata 26296648  T
Q  101 actc 104  Q
    ||||    
T  26296647 actc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 35522944 - 35522881
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 99  Q
    |||||||| |||||||||||| ||| ||||||||||||| ||| ||| ||||||||||||||||    
T  35522944 acgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36208276 - 36208173
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| || |||||||||||||||||||| || |||||  ||||||||||| ||||||    ||||||  ||||||| | ||||||||||||||     
T  36208276 aagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcata 36208177  T
Q  101 actc 104  Q
    ||||    
T  36208176 actc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 46033798 - 46033901
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    ||||||||||||| |||||| | || || ||||| |||||||| |||||| ||||| ||| ||| ||||||||| |||||||  || ||||||||||||     
T  46033798 aagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcata 46033897  T
Q  101 actc 104  Q
    ||||    
T  46033898 actc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 38044286 - 38044197
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||  || |||| ||||| |||||||||||||||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  38044286 ttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 39255955 - 39256023
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||| |||||||| ||| | |||| |||||||||| ||||||| | |||||||||||||| ||||    
T  39255955 acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41423785 - 41423682
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    ||||||||||||| |||| | || || ||||||| || ||||| ||||||||||   ||||||  ||||||||  || |||| ||||||||||||||||     
T  41423785 aagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcata 41423686  T
Q  101 actc 104  Q
    ||||    
T  41423685 actc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 104
Target Start/End: Original strand, 10343597 - 10343663
Alignment:
Q  38 gtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||||||| ||||||   |||||||  ||||||| | |||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 16374845 - 16374883
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaa 63  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  16374845 tccacgtgaccacgtgtcagatttttgtgtggatgtcaa 16374883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 22343426 - 22343361
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  22343426 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 32564461 - 32564526
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| |||||||  |||| |||||||||| ||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 18207248 - 18207180
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| | |||||||| ||| ||||||  ||||||||| ||||||| | |||||||||||||| ||||    
T  18207248 acgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  48 tttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||||| ||| |||  |||||||| ||||||| |||||||||||||||| ||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 5e-35; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15832680 - 15832577
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||    
T  15832680 aagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcatt 15832581  T
Q  101 actc 104  Q
    ||||    
T  15832580 actc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17598657 - 17598542
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||||||||| |||||||| |||||||||||| ||||||| | ||||||| ||||||| | |||||||||||||||    
T  17598657 aagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatt 17598558  T
Q  101 actcctttttaaaata 116  Q
    |||| |||| ||||||    
T  17598557 actcattttcaaaata 17598542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32869781 - 32869678
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||| ||    
T  32869781 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcttt 32869682  T
Q  101 actc 104  Q
    ||||    
T  32869681 actc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 22880655 - 22880755
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| | |||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  22880655 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 22880754  T
Q  101 a 101  Q
    |    
T  22880755 a 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 6209478 - 6209565
Alignment:
Q  17 gtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||| ||||||||||||||||||| || |||||||||||  |||||||| |||||||| ||||||| | |||||||||||||||||||    
T  6209478 gtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 31109418 - 31109500
Alignment:
Q  22 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | |||||||  ||||||||||    
T  31109418 gggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 29857906 - 29857826
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcc 105  Q
    ||||||| ||||||||||| |||||||||||| ||| ||| ||||||||| || |||||| ||||||||||||||||||||    
T  29857906 tccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactcc 29857826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11427721 - 11427616
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcaccta--aagatgtctatgtatca 98  Q
    |||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||  | | |||||||||||||    
T  11427721 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatca 11427622  T
Q  99 ttactc 104  Q
    ||||||    
T  11427621 ttactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 23128148 - 23128224
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 101  Q
    ||||||||||||||||||| |||||||||||| ||||||| | |||||| |||| ||||| ||||||| ||||||||    
T  23128148 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31110758 - 31110859
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||||||||||| |||  ||||||||| ||||||||| |  ||||||| ||||||||| ||||||| ||||||||||||||||     
T  31110758 aagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcata 31110855  T
Q  101 actc 104  Q
    ||||    
T  31110856 actc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31976351 - 31976248
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||| || ||||| |||||||| |||||||||||| ||| ||| ||| ||||| ||||||| ||||||||||||||||     
T  31976351 aagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcata 31976252  T
Q  101 actc 104  Q
    ||||    
T  31976251 actc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 946452 - 946377
Alignment:
Q  28 acgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 103  Q
    ||||||||| |||||| ||||||| || | ||||||| |||||||| |||||||| |||||||||||||| |||||    
T  946452 acgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9379709 - 9379807
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 99  Q
    |||||||||| ||||||||   | ||||| || | ||||||||||||||||| ||| ||||||  | |||||||||| |||| ||||||||||||||||    
T  9379709 aagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31953027 - 31953130
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | ||||||||   ||||||| |||  || ||||| |||||| ||||| ||||||  ||||||||| ||||||| ||||||||| |||||||    
T  31953027 aagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcatt 31953126  T
Q  101 actc 104  Q
    ||||    
T  31953127 actc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 28536485 - 28536582
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  |||||||| ||||  ||||||| |||||||||||| ||||||  | ||||||| ||||||| ||||| |||||||||||    
T  28536485 aagagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 4231637 - 4231548
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||  || | |||||||| |||||||||||| || |||  ||||||||| ||||||| ||||| |||| ||||| ||||    
T  4231637 ttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 15508059 - 15508124
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  15508059 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 15990077 - 15990142
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  15990077 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 30341395 - 30341460
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  30341395 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8346385 - 8346494
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||| || ||||||||||||    
T  8346385 aagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcatt 8346484  T
Q  101 actccttttt 110  Q
    |||| |||||    
T  8346485 actctttttt 8346494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 48716293 - 48716382
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||    
T  48716293 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44548373 - 44548473
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  44548373 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatt 44548472  T
Q  101 a 101  Q
    |    
T  44548473 a 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9474873 - 9474976
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | ||||||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  9474873 aagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 9474972  T
Q  101 actc 104  Q
    ||||    
T  9474973 actc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 51898694 - 51898783
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  51898694 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27564732 - 27564835
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||| ||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||    
T  27564732 aagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcatt 27564831  T
Q  101 actc 104  Q
    ||||    
T  27564832 actc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 2582004 - 2581915
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  2582004 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 38632332 - 38632421
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||||||| | |||||||||||||||||||    
T  38632332 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38595257 - 38595149
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||| ||| |||||||||||    
T  38595257 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcatt 38595158  T
Q  101 actcctttt 109  Q
    |||| ||||    
T  38595157 actcttttt 38595149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3000422 - 3000319
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | ||| |||||||||||    
T  3000422 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcatt 3000323  T
Q  101 actc 104  Q
    ||||    
T  3000322 actc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41758908 - 41758805
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | ||||||||| ||||||| |||||||||||||| |||||||||||| ||||||| ||||||||| ||  ||| | |||||||||||||||    
T  41758908 aagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcatt 41758809  T
Q  101 actc 104  Q
    ||||    
T  41758808 actc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 49811557 - 49811627
Alignment:
Q  34 ctacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  49811557 ctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 37649275 - 37649198
Alignment:
Q  27 cacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||| |||||||| |||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||    
T  37649275 cacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 43235 - 43131
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| | |||||||||||||||||||| |||||||||||| ||||||| | ||||||||| |||||   |||||||||||||||    
T  43235 aagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcatt 43136  T
Q  101 actcc 105  Q
    |||||    
T  43135 actcc 43131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32813350 - 32813247
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||| ||||| |||||||| |||||||||||| ||| ||| ||||||||| ||||||| ||||||||||||||||     
T  32813350 aagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcata 32813251  T
Q  101 actc 104  Q
    ||||    
T  32813250 actc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 47452317 - 47452420
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||||||||||||||| | |||||||||||| ||||||| ||||||||  ||||||| | |||||||||||||||    
T  47452317 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 47452416  T
Q  101 actc 104  Q
    ||||    
T  47452417 actc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 26274521 - 26274435
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 101  Q
    ||||||||| |||||||||||| |||||| |||||| ||||||||||||||| ||||||| ||| ||| | ||||||||||||||||    
T  26274521 ttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcatta 26274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 45044557 - 45044660
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| ||||||||| ||||||| ||| |||| ||||| |||||||| ||| ||||||||||||||||| ||||||| ||  | ||||||||||     
T  45044557 aagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcata 45044656  T
Q  101 actc 104  Q
    ||||    
T  45044657 actc 45044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 50630561 - 50630458
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| |  |||| | ||||||| ||||||| | | |||||||||||||    
T  50630561 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcatt 50630462  T
Q  101 actc 104  Q
    ||||    
T  50630461 actc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13414864 - 13414787
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcac 78  Q
    |||||||||| || |||||  |||||||||||||||||||| | |||||||||||| ||||||| |||||||||||||    
T  13414864 aagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgtcac 13414787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 11152389 - 11152476
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 103  Q
    |||||| ||||| || ||||||||||||| ||||||||||||||||| || ||||||||| ||||| ||| ||||||||| ||||||||    
T  11152389 ttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacct-aaggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 23597099 - 23597191
Alignment:
Q  12 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||||| |||| ||||| | |||||||| |||||| ||||| | |||||  |||||||| ||||||| |||||||||||||||||||||    
T  23597099 tgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 44334178 - 44334229
Alignment:
Q  12 tgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaa 63  Q
    ||||||||| ||||||| ||||||||||||||  ||||||||||||||||||    
T  44334178 tgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaa 44334229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 26440802 - 26440741
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatc 97  Q
    |||||||| |||||||||||| ||| ||| |||||||||||| |||| ||||||||| ||||    
T  26440802 acgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 37926470 - 37926538
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||| |||||| ||||| ||| ||| | ||||||| ||||||||||| |||||||||||| ||||    
T  37926470 acgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 5959011 - 5959105
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttt 109  Q
    |||||| |||||||  |||| || ||||| |||||||||||| ||||||  ||||||||| ||| ||| | ||| |||||||||| |||| ||||    
T  5959011 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactcttttt 5959105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 41608528 - 41608593
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||  ||||||  ||||||||| ||||||| ||||| |||||||||| ||||    
T  41608528 tgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 48489400 - 48489343
Alignment:
Q  4 agaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtc 61  Q
    ||||||| || |||||| || |||||||||| || ||||| |||||||||||||||||    
T  48489400 agaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 50591035 - 50591100
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  50591035 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 5e-32; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 12831150 - 12831044
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||    
T  12831150 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatt 12831051  T
Q  101 actcctt 107  Q
    |||||||    
T  12831050 actcctt 12831044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 37038568 - 37038479
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  37038568 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14548025 - 14547922
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| | |||||||||||| ||    
T  14548025 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatcttt 14547926  T
Q  101 actc 104  Q
    ||||    
T  14547925 actc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 109
Target Start/End: Original strand, 504132 - 504226
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttt 109  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||| ||||    
T  504132 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcatttt 504226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10284628 - 10284731
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||| | ||||||||||||||     
T  10284628 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcata 10284727  T
Q  101 actc 104  Q
    ||||    
T  10284728 actc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15197436 - 15197333
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||   |||||||||||||||    
T  15197436 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatt 15197337  T
Q  101 actc 104  Q
    ||||    
T  15197336 actc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34012293 - 34012396
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||| | |||||||||||||||    
T  34012293 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 34012392  T
Q  101 actc 104  Q
    ||||    
T  34012393 actc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40423940 - 40424043
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | | |||||||||||||    
T  40423940 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcatt 40424039  T
Q  101 actc 104  Q
    ||||    
T  40424040 actc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5957933 - 5957831
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||  ||||||||||||||||    
T  5957933 aagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcatt 5957834  T
Q  101 act 103  Q
    |||    
T  5957833 act 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 23122594 - 23122697
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || || ||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  23122594 aagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcatt 23122693  T
Q  101 actc 104  Q
    ||||    
T  23122694 actc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 15048179 - 15048281
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||| ||| |||||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||     
T  15048179 aagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcata 15048277  T
Q  101 actc 104  Q
    ||||    
T  15048278 actc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 44507084 - 44507187
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| |||| |||| | |||||||||||||||||||||| |||||||||||| ||| |||  |||||||  ||||||| | |||||||||||||||    
T  44507084 aagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcatt 44507183  T
Q  101 actc 104  Q
    ||||    
T  44507184 actc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 1179961 - 1180040
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| ||||||||||||| |||||||||||| ||||||| ||||||||  ||||||| | |||||||||||||||||||    
T  1179961 tccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10621084 - 10621182
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 99  Q
    |||||||| | || |||||| || || | ||| |||||||||| |||||||||||| ||||||| ||||||||  ||||||| ||||||||||||||||    
T  10621084 aagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 14055610 - 14055692
Alignment:
Q  22 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||||||||||| ||| | |||||||||||||||||||   |||||||||||||||| | |||| ||||||||| ||||    
T  14055610 gggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 8841429 - 8841510
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaa 82  Q
    |||||||| | || |||||| |||||||||||||||||||| | |||||||||||| ||||||| |||||| || |||||||    
T  8841429 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaa 8841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 20074966 - 20075034
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||| |||||| ||||| |||||||  |||||||| ||||||| |||||||||||||||||||||    
T  20074966 acgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 43414578 - 43414686
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || |||| ||||| |||||| | |||||||||||| ||||||| ||||| ||| || |||| ||||||||||||||||     
T  43414578 aagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcata 43414677  T
Q  101 actcctttt 109  Q
    |||| ||||    
T  43414678 actcatttt 43414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4854860 - 4854963
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||||||||||| ||| | || | ||| |||||| ||| | ||| ||| ||||||||| ||||||| |||||||||||||||||    
T  4854860 aagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcatt 4854959  T
Q  101 actc 104  Q
    ||||    
T  4854960 actc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 110
Target Start/End: Original strand, 30479509 - 30479580
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 110  Q
    ||||| |||||| ||||||||||||| ||||||||| ||||||| | ||| |||||||||| ||||||||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactccttttt 30479580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15258926 - 15258986
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtc 61  Q
    |||||||||| || |||||||||||||||||||| || ||||| |||||| ||||||||||    
T  15258926 aagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtc 15258986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17443928 - 17443825
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | | ||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||||||| | ||||||||||||||     
T  17443928 aagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcata 17443829  T
Q  101 actc 104  Q
    ||||    
T  17443828 actc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 42221597 - 42221515
Alignment:
Q  22 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||  ||| ||||||||| |||||||||||| |||| |    ||||||||||||||| ||||| |||||||||||||||    
T  42221597 gggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 110
Target Start/End: Original strand, 16056436 - 16056507
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 110  Q
    ||||| |||||||||||| ||||||  | ||||||||||| ||| ||||| |||||||||| |||| |||||    
T  16056436 tgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactctttttt 16056507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 16383442 - 16383371
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactccttttt 110  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| |||| |||||    
T  16383442 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctttttt 16383371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 34307281 - 34307216
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  34307281 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50052425 - 50052534
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||    
T  50052425 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 50052524  T
Q  101 actccttttt 110  Q
    |||| |||||    
T  50052525 actctttttt 50052534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41236450 - 41236347
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | |||||||||||||||    
T  41236450 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 41236351  T
Q  101 actc 104  Q
    ||||    
T  41236350 actc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 480444 - 480553
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||    
T  480444 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcatt 480543  T
Q  101 actccttttt 110  Q
    |||| |||||    
T  480544 actctttttt 480553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 54473544 - 54473633
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  54473544 ttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29239989 - 29239886
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  29239989 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcatt 29239890  T
Q  101 actc 104  Q
    ||||    
T  29239889 actc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11511459 - 11511562
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  11511459 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 11511558  T
Q  101 actc 104  Q
    ||||    
T  11511559 actc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 48183046 - 48183149
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  48183046 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcatt 48183145  T
Q  101 actc 104  Q
    ||||    
T  48183146 actc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 50526192 - 50526271
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||||| |||||||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  50526192 tccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 42044364 - 42044476
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| |||  || | ||||||| ||||||| | |||||||||||||||    
T  42044364 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcatt 42044463  T
Q  101 actcctttttaaa 113  Q
    |||| ||||||||    
T  42044464 actcttttttaaa 42044476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3481757 - 3481654
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  ||||||||||||||| |||||| |||||||||||| |||||||  |||||||| ||||||||| |||||||||||||||    
T  3481757 aagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcatt 3481658  T
Q  101 actc 104  Q
    ||||    
T  3481657 actc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6034147 - 6034044
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||||||||||| ||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  6034147 aagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 6034048  T
Q  101 actc 104  Q
    ||||    
T  6034047 actc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24995104 - 24995207
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| || |||||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| || |||| | |||| || |||||||    
T  24995104 aagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcatt 24995203  T
Q  101 actc 104  Q
    ||||    
T  24995204 actc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 23608312 - 23608235
Alignment:
Q  27 cacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| | ||||||| |||||||||||    
T  23608312 cacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 31910295 - 31910192
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||| ||| ||| |||||| |||||||||||| |||||||  |||||||||||||||| ||||||||||||||||     
T  31910295 aagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcata 31910196  T
Q  101 actc 104  Q
    ||||    
T  31910195 actc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 29234242 - 29234345
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||  | | ||||| ||||||||| || |||| | |||||||||||||||    
T  29234242 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcatt 29234341  T
Q  101 actc 104  Q
    ||||    
T  29234342 actc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 40574846 - 40574779
Alignment:
Q  37 cgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||| |||||||||||| ||||||| ||||||||  ||||||| |||||||||||||||| ||||    
T  40574846 cgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 55475277 - 55475191
Alignment:
Q  18 tgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||||||  || | || ||||| |||||||||||| ||||||| ||||||||| ||||||| ||||| |||||||||| ||||    
T  55475277 tgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 47104612 - 47104544
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||||||||||||||||| ||||| |  ||||||||||| ||||  |||||||| |||||||||||    
T  47104612 acgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 53352563 - 53352660
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 99  Q
    |||||||| |||| |||||| |||||||| | ||||||||||| |||||||||| | ||| |||   ||||||| ||||||| | ||||||||||||||    
T  53352563 aagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 28480267 - 28480360
Alignment:
Q  3 gagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtat 96  Q
    |||||| | ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||||||| | |||||||||||    
T  28480267 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 28481142 - 28481235
Alignment:
Q  3 gagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtat 96  Q
    |||||| | ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||||||| | |||||||||||    
T  28481142 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 28482017 - 28482110
Alignment:
Q  3 gagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtat 96  Q
    |||||| | ||||||||  |||||||| ||||||| ||||| |||||||||||  ||| ||   |||||||||||||||| | |||||||||||    
T  28482017 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29977988 - 29977885
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  |||||||  ||||||||||||| |||||||||||| ||| ||  ||||||||| ||||||  | | | |||||||||||    
T  29977988 aagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcatt 29977889  T
Q  101 actc 104  Q
    ||||    
T  29977888 actc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41823985 - 41823930
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtgg 56  Q
    |||||||| | || |||||| ||||||| |||||||||||||| ||||||||||||    
T  41823985 aagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgg 41823930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 48647723 - 48647826
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| | ||||||||||| |||||| | |||||| ||||| ||| ||  |||||||||| |||||| ||||| ||||| ||||     
T  48647723 aagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcata 48647822  T
Q  101 actc 104  Q
    ||||    
T  48647823 actc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 56300162 - 56300233
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtat 72  Q
    |||||||| | |||||||||||| | ||  |||| || ||||| |||||||||||||||||||||| |||||    
T  56300162 aagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaatgatgtat 56300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 29547994 - 29548059
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  | ||||||| ||||||| ||||| |||||||||| ||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 44536781 - 44536845
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| ||||||||||||||||| || ||||||||| ||||||||  ||| |||||||||| ||||    
T  44536781 tgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 47986273 - 47986208
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||||||||||  | ||||||| ||||||| | ||| |||||||||| ||||    
T  47986273 tgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6679801 - 6679698
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| ||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||     
T  6679801 aagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcata 6679702  T
Q  101 actc 104  Q
    ||||    
T  6679701 actc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 2740377 - 2740274
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||||||    
T  2740377 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 2740278  T
Q  101 actc 104  Q
    ||||    
T  2740277 actc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40145510 - 40145407
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||||||| | |||||||||||||||    
T  40145510 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcatt 40145411  T
Q  101 actc 104  Q
    ||||    
T  40145410 actc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18520881 - 18520990
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  18520881 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 18520980  T
Q  101 actccttttt 110  Q
    | || |||||    
T  18520981 attctttttt 18520990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13811755 - 13811652
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||| | |||||||||||| ||    
T  13811755 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcttt 13811656  T
Q  101 actc 104  Q
    ||||    
T  13811655 actc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 28177878 - 28177775
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | ||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||     
T  28177878 aagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcata 28177779  T
Q  101 actc 104  Q
    ||||    
T  28177778 actc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33149635 - 33149738
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || |||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||| | |||||||||||||||    
T  33149635 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcatt 33149734  T
Q  101 actc 104  Q
    ||||    
T  33149735 actc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35785302 - 35785199
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  35785302 aagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 35785203  T
Q  101 actc 104  Q
    ||||    
T  35785202 actc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 36732939 - 36733042
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||||||||||| |||||| |||||||||||| ||||||| |||||||||  |||||| | |||||||||||||||    
T  36732939 aagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcatt 36733038  T
Q  101 actc 104  Q
    ||||    
T  36733039 actc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 42414313 - 42414402
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||||||  | |||||||||||||||||||    
T  42414313 ttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 109
Target Start/End: Complemental strand, 14831903 - 14831809
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttt 109  Q
    |||||| || ||||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||   ||||||||||||||||||| ||||    
T  14831903 ttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcatttt 14831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 15409621 - 15409710
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| ||||||| ||| |||||||||| |||||||||||| |||||||   ||||||||||||||| |||||||||||||||| ||||    
T  15409621 ttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 35943913 - 35943994
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 106  Q
    ||||||| ||||||||||| |||||||||||| ||||||||| ||||||| ||||||| | |||||||||||||| ||||||    
T  35943913 tccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactcct 35943994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 31009077 - 31008988
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| || ||||||||||||||||||| |||||||||||| |||  ||   ||||||||||||||| ||||| |||||||||| ||||    
T  31009077 ttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 41470427 - 41470516
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||||||||||||||||| |||||| | || || | ||| | ||||||| ||||||||| ||||||||||| |||||||    
T  41470427 ttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactc 41470516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  45 atttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 103  Q
    |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 20073527 - 20073616
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||||||||||||||   |||||  | |||||| ||||  ||||||| |||||||||||| |||| ||||||||| |||||||||||    
T  20073527 ttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26720619 - 26720516
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || |||| ||| | |||||||| |||||| ||| | ||| ||| ||||||||| ||||||| ||||||||||||||||     
T  26720619 aagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcata 26720520  T
Q  101 actc 104  Q
    ||||    
T  26720519 actc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26990368 - 26990265
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || |||| ||| | |||||||| |||||| ||| | ||| ||| ||||||||| ||||||| ||||||||||||||||     
T  26990368 aagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcata 26990269  T
Q  101 actc 104  Q
    ||||    
T  26990268 actc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 2252203 - 2252268
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| ||||| |||||||||| ||||    
T  2252203 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31132447 - 31132390
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggat 58  Q
    |||| ||| |||| |||||| |||||||||||||||| ||||| ||||||||||||||    
T  31132447 aagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtggat 31132390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21370107 - 21370052
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtgg 56  Q
    |||||||||| ||||||||| ||||||||||||| || ||||| ||||||| ||||    
T  21370107 aagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgg 21370052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 33825356 - 33825426
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 106  Q
    |||||||| |||||| ||||| ||||||   |||||||| |||||||  ||||||||| ||||||||||||    
T  33825356 acgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactcct 33825426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 3921300 - 3921365
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||||| | ||| |||||||||| ||||    
T  3921300 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 6260020 - 6260101
Alignment:
Q  23 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| ||||| | |||| | ||||||| |||| ||| ||| ||||||||||||||||  | ||| |||||||||||||||    
T  6260020 ggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 10249379 - 10249482
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||    
T  10249379 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcatt 10249478  T
Q  101 actc 104  Q
    ||||    
T  10249479 actc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 32505659 - 32505748
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||    
T  32505659 ttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19930817 - 19930917
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | ||||||||| |||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||| | |||||||||||||||    
T  19930817 aagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 19930916  T
Q  101 a 101  Q
    |    
T  19930917 a 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13438446 - 13438343
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| | ||||||||||||||| | |||||||||||||||    
T  13438446 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcatt 13438347  T
Q  101 actc 104  Q
    ||||    
T  13438346 actc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28863558 - 28863458
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  28863558 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 28863459  T
Q  101 a 101  Q
    |    
T  28863458 a 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 4060764 - 4060685
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  4060764 tccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9058583 - 9058480
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  9058583 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 9058484  T
Q  101 actc 104  Q
    ||||    
T  9058483 actc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33436097 - 33436200
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||| | |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  33436097 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 33436196  T
Q  101 actc 104  Q
    ||||    
T  33436197 actc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40701581 - 40701478
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  40701581 aagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 40701482  T
Q  101 actc 104  Q
    ||||    
T  40701481 actc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17473123 - 17473018
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||||||||||||||||| |||||||||||| ||||||| ||||||||| || |||| | |||||||||||||||    
T  17473123 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 17473024  T
Q  101 actcct 106  Q
    ||||||    
T  17473023 actcct 17473018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7465732 - 7465835
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| || |||| | |||||||||||||||    
T  7465732 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcatt 7465831  T
Q  101 actc 104  Q
    ||||    
T  7465832 actc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 27864807 - 27864704
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || || ||| |||||||||||| ||||||||| |||||||||||||||||||| ||||||||| ||| ||| | |||||||||||||||    
T  27864807 aagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcatt 27864708  T
Q  101 actc 104  Q
    ||||    
T  27864707 actc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 38882832 - 38882913
Alignment:
Q  22 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| ||||| ||||||| | |||||||||||||||||||    
T  38882832 gggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 5574485 - 5574588
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || ||||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||   |||||||||||||||    
T  5574485 aagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcatt 5574584  T
Q  101 actc 104  Q
    ||||    
T  5574585 actc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20700918 - 20700815
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || || ||| |||||||||||||||||||||| |||||||||| |  |||||| ||||||||| ||| ||| |||||||||||||||||    
T  20700918 aagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcatt 20700819  T
Q  101 actc 104  Q
    ||||    
T  20700818 actc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28381652 - 28381755
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| | ||||| |||||||||||||| |||||||||||| |||| || ||||||||| ||||||| | |||||||||||||||    
T  28381652 aagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcatt 28381751  T
Q  101 actc 104  Q
    ||||    
T  28381752 actc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 30915566 - 30915463
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||| | |||||||||||||||||||||| |||||| |||||  |||||| ||||||||| ||||||| | |||||||||||||||    
T  30915566 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcatt 30915467  T
Q  101 actc 104  Q
    ||||    
T  30915466 actc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40613899 - 40614002
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||| ||| | |||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||     
T  40613899 aagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcata 40613998  T
Q  101 actc 104  Q
    ||||    
T  40613999 actc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 42257296 - 42257193
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||| ||| | |||||||| |||||| ||||| ||||||||| ||||||| ||||||||||||||||||||||||     
T  42257296 aagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcata 42257197  T
Q  101 actc 104  Q
    ||||    
T  42257196 actc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17820001 - 17820104
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| ||||||||  |||||||||| || || ||||| |||||||||||| ||||||  ||||||||| |||||| || ||||||||||||||     
T  17820001 aagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcata 17820100  T
Q  101 actc 104  Q
    ||||    
T  17820101 actc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36168939 - 36168836
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| |||| |||||| ||||||| ||| | |||||||||||||||||||||  || ||| | |||||||||| |||| ||||||||||||||||     
T  36168939 aagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcata 36168840  T
Q  101 actc 104  Q
    ||||    
T  36168839 actc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 41575219 - 41575138
Alignment:
Q  22 gggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattact 103  Q
    |||||||| |||| || ||||||||||||||||| |||||||| ||||||||  || |||| ||||||||||||||||||||    
T  41575219 gggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 33436279 - 33436211
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||| |||||| ||||| ||||||| ||||||||| || |||| |||||||||||||||||||||    
T  33436279 acgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 38273155 - 38273242
Alignment:
Q  17 gtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||| ||||||| ||| |||||||||| |||||||||||| ||| ||| ||||||||| || ||||  ||||||||||||||| ||||    
T  38273155 gtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 2533212 - 2533124
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||| ||||| | ||| |||||||||| |||||||||||| ||||||| | ||||||| ||| ||| |||||||||||||||| ||||    
T  2533212 ttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26891501 - 26891604
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| || |||| |  |||||||||||| || ||||| |||||||||||| |||| |  ||||||||| ||||||| | || |||||||||||     
T  26891501 aagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcata 26891600  T
Q  101 actc 104  Q
    ||||    
T  26891601 actc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 43490186 - 43490121
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||| |||||||||||| ||||||  ||||||||||||||||| | ||| |||||||||| ||||    
T  43490186 tgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 106
Target Start/End: Complemental strand, 38732443 - 38732352
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 106  Q
    |||||| |||||||  |||| || ||||| |||||||||||| ||||||  | ||||||||||| ||| | ||| |||||||||| ||||||    
T  38732443 ttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactcct 38732352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 8e-28; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 53982114 - 53982011
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  53982114 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 53982015  T
Q  101 actc 104  Q
    ||||    
T  53982014 actc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17470508 - 17470405
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  |||||||||||||||||||||| |||||||||||| ||| ||| ||||||||| ||||||||| |||||||||||||||    
T  17470508 aagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcatt 17470409  T
Q  101 actc 104  Q
    ||||    
T  17470408 actc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27714888 - 27714991
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||  ||||||||| |||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  101 actc 104  Q
    ||||    
T  27714988 actc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 33118872 - 33118951
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  33118872 tccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33644303 - 33644200
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||| || | |||||||||||||||    
T  33644303 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcatt 33644204  T
Q  101 actc 104  Q
    ||||    
T  33644203 actc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 54868892 - 54868995
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||    
T  54868892 aagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcatt 54868991  T
Q  101 actc 104  Q
    ||||    
T  54868992 actc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11347919 - 11348022
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || || ||||||||||| ||| | |||||||| |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||     
T  11347919 aagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcata 11348018  T
Q  101 actc 104  Q
    ||||    
T  11348019 actc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 36707445 - 36707524
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| | | |||||||||||||||||    
T  36707445 tccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 49607493 - 49607414
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  49607493 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 9563101 - 9562999
Alignment:
Q  2 agagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatta 101  Q
    ||||||| | |||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | |||||||||| |||| | ||| ||||||||||||    
T  9563101 agagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcatta 9563002  T
Q  102 ctc 104  Q
    |||    
T  9563001 ctc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 52629403 - 52629305
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 99  Q
    |||||||| | || |||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||    
T  52629403 aagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 11095377 - 11095453
Alignment:
Q  28 acgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8076496 - 8076393
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||||||||||||||| | |||||||||||| ||||||| |||||| || ||||||| | ||| |||||||||||    
T  8076496 aagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcatt 8076397  T
Q  101 actc 104  Q
    ||||    
T  8076396 actc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24699951 - 24700054
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | ||||||| ||||||||||||| | ||||| || |||||| ||||| ||||||| ||||||||| || |||| |||||||||||||||||    
T  24699951 aagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcatt 24700050  T
Q  101 actc 104  Q
    ||||    
T  24700051 actc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31456792 - 31456690
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| |||||||| ||||||||||||| |||||||||||| ||||||| ||||||||| | ||||  | |||||||||||||||    
T  31456792 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcatt 31456693  T
Q  101 act 103  Q
    |||    
T  31456692 act 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 35536707 - 35536626
Alignment:
Q  23 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||| |||| |||||||| |||||| ||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  35536707 ggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26141529 - 26141632
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||  ||||||| ||||| |||||||| |||||||||||| ||| ||| ||||||||| ||||||| ||||||||||||||||     
T  26141529 aagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcata 26141628  T
Q  101 actc 104  Q
    ||||    
T  26141629 actc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 41189761 - 41189864
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||||| ||| | ||||||||||||||| ||||| ||||||||| ||||||| ||||||| ||||| ||||||||||     
T  41189761 aagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcata 41189860  T
Q  101 actc 104  Q
    ||||    
T  41189861 actc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26754798 - 26754700
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcat 99  Q
    |||||||||| || |||||| ||||||| ||||| || ||||| ||||||||||||||||| || ||||||||| ||||||| | |||||||| |||||    
T  26754798 aagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 30801730 - 30801829
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| || |||||  |||||||  ||||||| ||||| |||||||||||| | ||||| |||||||| |||||||| | |||||||||||||||    
T  30801730 aagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 35093650 - 35093592
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatc 97  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  35093650 tgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 48587102 - 48587187
Alignment:
Q  15 ttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||| || ||||||||||||||||||| |||||| ||| | ||||||| ||||||||| ||||||| | | |||||||||||||    
T  48587102 ttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 14623874 - 14623941
Alignment:
Q  39 tgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcct 106  Q
    ||||| |||||| ||||| ||||||  ||||||||| ||||||| |||||||||||||||||||||||    
T  14623874 tgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactcct 14623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 51419357 - 51419460
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| ||||| | ||| | |||||||| |||||||||||| ||| ||| | |||||||||| |||| ||||||||||||||||     
T  51419357 aagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcata 51419456  T
Q  101 actc 104  Q
    ||||    
T  51419457 actc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 8956843 - 8956762
Alignment:
Q  23 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    ||||||| |||  |||||||| |||||| ||||| ||||||| | ||||||| ||| ||| |||||||||||||||||||||    
T  8956843 ggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 47531933 - 47531865
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||| ||| |||||||||||| ||| ||||||||| || |||| |||||||||||||||| ||||    
T  47531933 acgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 35965806 - 35965874
Alignment:
Q  36 acgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactc 104  Q
    |||||||| |||||| ||||| ||||||| | |||||| |||| ||| ||||| |||||||||||||||    
T  35965806 acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 20764912 - 20765015
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||| | ||||||| ||| | |||||||| |||||||||||| ||| |||  |||||||  ||||||| ||||||||||| ||||     
T  20764912 aagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcata 20765011  T
Q  101 actc 104  Q
    ||||    
T  20765012 actc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 48375703 - 48375806
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| || |||||| ||||||| ||||| ||  |||| |||||||| ||||| |  |  ||||||||||||||||| | |||||||| |||||     
T  48375703 aagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcata 48375802  T
Q  101 actc 104  Q
    ||||    
T  48375803 actc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 41080810 - 41080700
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| || |||||  |||||||| |||| || | ||| ||||||| |||| ||||||| ||||| |||  || ||| |||||||||||||||||    
T  41080810 aagagaaaatgtgcttgtgt-gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgctac-taaggatgtctatgtatcatt 41080713  T
Q  101 actcctttttaaa 113  Q
    |||| || |||||    
T  41080712 actcgttgttaaa 41080700  T

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Target: scaffold1268 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 926 - 1029
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || | |||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  926 aagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatt 1025  T
Q  101 actc 104  Q
    ||||    
T  1026 actc 1029  T

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Target: scaffold1267 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 926 - 1029
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||| | || |||||| || | |||||||||||||||||  ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  926 aagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcatt 1025  T
Q  101 actc 104  Q
    ||||    
T  1026 actc 1029  T

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Target: scaffold0321 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 10128 - 10218
Alignment:
Q  23 ggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcctttttaaaa 114  Q
    ||||||||||||||||||||| |||||| ||||||||||||| | ||||||| ||||||||| |||||||||||||| ||| ||||||||||    
T  10128 ggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataact-ctttttaaaa 10218  T

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Target: scaffold0110 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 8860 - 8963
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcatt 100  Q
    |||||||||| |  |||||  ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||| ||||||     
T  8860 aagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcata 8959  T
Q  101 actc 104  Q
    ||||    
T  8960 actc 8963  T

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Target: scaffold0237 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 4108 - 4028
Alignment:
Q  25 tccacgtgactacgtgtcaaatttttgtgtggatgtcaaatggtgtattgtcacctaaagatgtctatgtatcattactcc 105  Q
    ||||||| ||||||||||| |||||||||||| ||| ||| ||||||||| || |||||| ||||||||||||||||||||    
T  4108 tccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactcc 4028  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17157 - 17097
Alignment:
Q  1 aagagaaaatatgtttgtgcagggtccacgtgactacgtgtcaaatttttgtgtggatgtc 61  Q
    |||||||||| || |||||| ||||||| ||||| || ||||| |||||||||||||||||    
T  17157 aagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtc 17097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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