View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1623-INSERTION-2 (Length: 223)

Name: NF1623-INSERTION-2
Description: NF1623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1623-INSERTION-2
NF1623-INSERTION-2
[»] chr6 (92 HSPs)
chr6 (8-223)||(7801152-7801356)
chr6 (12-126)||(9107370-9107484)
chr6 (11-126)||(8776972-8777087)
chr6 (12-127)||(16766641-16766756)
chr6 (11-126)||(426513-426628)
chr6 (13-126)||(7938061-7938174)
chr6 (11-107)||(34595098-34595194)
chr6 (18-126)||(1681703-1681811)
chr6 (11-122)||(7977829-7977940)
chr6 (13-126)||(15489733-15489845)
chr6 (12-112)||(8365519-8365619)
chr6 (12-107)||(10770674-10770768)
chr6 (11-112)||(853858-853959)
chr6 (14-98)||(16833281-16833365)
chr6 (12-125)||(12696277-12696383)
chr6 (12-126)||(9027123-9027237)
chr6 (11-87)||(17841588-17841664)
chr6 (11-126)||(3209327-3209442)
chr6 (11-87)||(28152083-28152158)
chr6 (12-68)||(31384923-31384979)
chr6 (11-126)||(4877891-4878003)
chr6 (11-118)||(28715256-28715355)
chr6 (12-100)||(7930276-7930364)
chr6 (12-126)||(5970108-5970216)
chr6 (17-84)||(31959146-31959213)
chr6 (148-190)||(7801352-7801394)
chr6 (14-64)||(9522898-9522948)
chr6 (12-126)||(18367782-18367895)
chr6 (22-72)||(25010212-25010262)
chr6 (11-88)||(7265592-7265669)
chr6 (11-63)||(403863-403915)
chr6 (11-123)||(5732509-5732621)
chr6 (11-78)||(32978898-32978966)
chr6 (18-73)||(1191706-1191761)
chr6 (12-87)||(3398603-3398677)
chr6 (20-123)||(4118341-4118444)
chr6 (11-86)||(6898280-6898355)
chr6 (12-70)||(9911528-9911587)
chr6 (12-127)||(20371110-20371220)
chr6 (11-98)||(33001288-33001375)
chr6 (12-126)||(10294052-10294166)
chr6 (19-84)||(17302543-17302609)
chr6 (12-126)||(21395308-21395421)
chr6 (27-126)||(34225824-34225915)
chr6 (12-88)||(7027224-7027301)
chr6 (13-86)||(19044449-19044522)
chr6 (25-122)||(25096372-25096469)
chr6 (11-126)||(7377930-7378039)
chr6 (12-64)||(9025494-9025546)
chr6 (11-87)||(12627576-12627652)
chr6 (13-72)||(24645479-24645539)
chr6 (11-78)||(19040345-19040412)
chr6 (27-126)||(34290092-34290191)
chr6 (11-61)||(1700362-1700412)
chr6 (14-96)||(9658854-9658936)
chr6 (12-126)||(17327655-17327769)
chr6 (36-126)||(24115871-24115961)
chr6 (12-72)||(8713978-8714039)
chr6 (13-126)||(13851681-13851794)
chr6 (11-64)||(32511665-32511718)
chr6 (18-78)||(2117069-2117129)
chr6 (11-63)||(6327517-6327569)
chr6 (12-64)||(7151419-7151471)
chr6 (19-63)||(17341671-17341715)
chr6 (20-64)||(17435206-17435250)
chr6 (12-79)||(9195754-9195821)
chr6 (12-63)||(9617442-9617493)
chr6 (11-62)||(9629392-9629443)
chr6 (35-126)||(10339149-10339240)
chr6 (13-72)||(13360373-13360432)
chr6 (27-62)||(16388248-16388283)
chr6 (40-87)||(19147431-19147478)
chr6 (14-64)||(7086802-7086852)
chr6 (12-86)||(7996378-7996452)
chr6 (12-86)||(8022349-8022423)
chr6 (11-73)||(21924934-21924996)
chr6 (11-53)||(26402679-26402721)
chr6 (12-78)||(26562682-26562748)
chr6 (20-73)||(6349745-6349798)
chr6 (29-78)||(10842525-10842574)
chr6 (13-87)||(27904037-27904113)
chr6 (17-78)||(30866149-30866210)
chr6 (11-63)||(31579226-31579276)
chr6 (69-130)||(31673543-31673604)
chr6 (12-84)||(6214547-6214619)
chr6 (12-64)||(7723250-7723302)
chr6 (12-60)||(7973665-7973713)
chr6 (11-43)||(16388216-16388248)
chr6 (11-87)||(23771563-23771638)
chr6 (13-53)||(31429004-31429044)
chr6 (14-126)||(32299220-32299332)
chr6 (12-64)||(34073347-34073399)
[»] chr4 (63 HSPs)
chr4 (11-126)||(23292985-23293100)
chr4 (13-118)||(35157986-35158091)
chr4 (12-126)||(19482613-19482727)
chr4 (27-126)||(36635269-36635368)
chr4 (20-121)||(27706185-27706286)
chr4 (11-107)||(21945467-21945563)
chr4 (11-98)||(49430998-49431086)
chr4 (11-71)||(54580022-54580082)
chr4 (11-126)||(12895273-12895388)
chr4 (11-126)||(42640477-42640589)
chr4 (11-87)||(12797337-12797412)
chr4 (12-87)||(30298930-30299006)
chr4 (12-87)||(30327798-30327874)
chr4 (11-78)||(2361974-2362041)
chr4 (12-126)||(12708091-12708206)
chr4 (11-126)||(4157103-4157209)
chr4 (12-78)||(12895116-12895182)
chr4 (18-126)||(20633430-20633535)
chr4 (14-64)||(29205451-29205501)
chr4 (13-81)||(715608-715677)
chr4 (13-81)||(752934-753003)
chr4 (12-73)||(3947766-3947827)
chr4 (11-64)||(28964247-28964300)
chr4 (11-108)||(38847011-38847108)
chr4 (12-64)||(11596352-11596404)
chr4 (13-124)||(847898-848009)
chr4 (27-126)||(903867-903966)
chr4 (13-72)||(24613702-24613761)
chr4 (12-126)||(16303266-16303379)
chr4 (20-98)||(40481610-40481687)
chr4 (14-63)||(6485613-6485662)
chr4 (11-126)||(15029716-15029825)
chr4 (18-126)||(24343452-24343560)
chr4 (12-87)||(4383352-4383426)
chr4 (11-74)||(8423717-8423780)
chr4 (11-70)||(16073396-16073454)
chr4 (12-106)||(28084486-28084581)
chr4 (11-98)||(34306803-34306889)
chr4 (20-76)||(51701253-51701309)
chr4 (11-126)||(10499269-10499382)
chr4 (20-87)||(11651142-11651209)
chr4 (15-85)||(24543967-24544038)
chr4 (12-125)||(30982878-30982988)
chr4 (11-122)||(40179635-40179746)
chr4 (11-57)||(6879464-6879510)
chr4 (19-85)||(14126118-14126184)
chr4 (16-78)||(31800482-31800544)
chr4 (12-70)||(32273526-32273584)
chr4 (25-70)||(14465088-14465133)
chr4 (12-78)||(50280874-50280942)
chr4 (20-64)||(37203271-37203315)
chr4 (38-126)||(44081603-44081691)
chr4 (13-72)||(5775359-5775418)
chr4 (12-87)||(13783265-13783340)
chr4 (13-63)||(28000743-28000794)
chr4 (13-64)||(47263993-47264044)
chr4 (27-76)||(15724564-15724614)
chr4 (11-52)||(4157455-4157496)
chr4 (36-117)||(20521873-20521954)
chr4 (13-126)||(33950081-33950194)
chr4 (17-78)||(40613443-40613504)
chr4 (12-87)||(22234890-22234966)
chr4 (27-63)||(22440615-22440651)
[»] chr1 (104 HSPs)
chr1 (11-126)||(42359448-42359563)
chr1 (12-127)||(1486709-1486824)
chr1 (12-126)||(47989443-47989556)
chr1 (11-126)||(22881615-22881724)
chr1 (27-126)||(398780-398879)
chr1 (11-126)||(38078660-38078770)
chr1 (12-126)||(6612171-6612285)
chr1 (12-87)||(1704992-1705067)
chr1 (11-128)||(9103583-9103699)
chr1 (13-126)||(38503265-38503378)
chr1 (12-71)||(24577186-24577245)
chr1 (11-86)||(31672894-31672969)
chr1 (13-76)||(40258934-40258997)
chr1 (11-126)||(41877469-41877584)
chr1 (11-87)||(37598816-37598891)
chr1 (11-87)||(46348382-46348458)
chr1 (12-78)||(113292-113358)
chr1 (13-87)||(1815241-1815315)
chr1 (14-78)||(21378571-21378635)
chr1 (11-71)||(22515886-22515946)
chr1 (35-126)||(2896144-2896235)
chr1 (12-99)||(5376500-5376587)
chr1 (11-62)||(18337338-18337389)
chr1 (27-126)||(34298381-34298480)
chr1 (11-73)||(51410022-51410085)
chr1 (13-71)||(28273089-28273147)
chr1 (12-126)||(31694710-31694824)
chr1 (14-87)||(32434718-32434792)
chr1 (17-126)||(10577740-10577849)
chr1 (16-126)||(18471243-18471355)
chr1 (12-108)||(40917714-40917808)
chr1 (17-98)||(48450592-48450673)
chr1 (12-76)||(6332666-6332729)
chr1 (14-118)||(10572591-10572695)
chr1 (13-126)||(18190109-18190214)
chr1 (20-126)||(13011223-13011330)
chr1 (24-127)||(16297295-16297398)
chr1 (11-78)||(19058855-19058922)
chr1 (17-112)||(31015002-31015097)
chr1 (12-126)||(7918211-7918325)
chr1 (11-112)||(5927339-5927440)
chr1 (12-98)||(5944254-5944342)
chr1 (14-78)||(32461465-32461529)
chr1 (13-85)||(36878447-36878519)
chr1 (12-87)||(18556456-18556531)
chr1 (18-85)||(30359374-30359441)
chr1 (16-118)||(48040465-48040568)
chr1 (36-106)||(1262849-1262919)
chr1 (14-76)||(1864882-1864944)
chr1 (12-78)||(9828037-9828103)
chr1 (18-126)||(3490396-3490498)
chr1 (13-126)||(6415002-6415110)
chr1 (11-124)||(9709767-9709880)
chr1 (12-71)||(17778549-17778605)
chr1 (11-87)||(24334704-24334781)
chr1 (19-107)||(14359529-14359615)
chr1 (35-87)||(16812527-16812579)
chr1 (12-100)||(20157350-20157438)
chr1 (14-74)||(23738675-23738735)
chr1 (12-87)||(35919276-35919356)
chr1 (66-126)||(48548016-48548076)
chr1 (13-84)||(27471567-27471638)
chr1 (36-126)||(609482-609572)
chr1 (12-73)||(6427459-6427523)
chr1 (12-78)||(9629900-9629966)
chr1 (28-78)||(12443476-12443526)
chr1 (27-85)||(23622304-23622362)
chr1 (11-73)||(35702587-35702649)
chr1 (30-79)||(23652991-23653040)
chr1 (12-73)||(25361884-25361945)
chr1 (19-126)||(29144365-29144471)
chr1 (11-64)||(40181878-40181931)
chr1 (12-61)||(44482240-44482289)
chr1 (12-68)||(2283669-2283725)
chr1 (13-73)||(5898267-5898327)
chr1 (14-78)||(10233246-10233310)
chr1 (30-78)||(17754304-17754352)
chr1 (11-87)||(52903233-52903309)
chr1 (11-85)||(2288168-2288240)
chr1 (12-87)||(6427334-6427409)
chr1 (35-78)||(9449031-9449074)
chr1 (14-85)||(13997869-13997940)
chr1 (11-70)||(14332641-14332700)
chr1 (19-110)||(15323124-15323215)
chr1 (35-126)||(21366043-21366134)
chr1 (12-59)||(25272494-25272541)
chr1 (40-87)||(28268192-28268239)
chr1 (12-87)||(34712383-34712458)
chr1 (27-86)||(36905982-36906041)
chr1 (35-126)||(40285677-40285768)
chr1 (11-85)||(13436444-13436518)
chr1 (29-126)||(17831548-17831639)
chr1 (11-53)||(21620973-21621015)
chr1 (27-87)||(9033022-9033083)
chr1 (27-64)||(16927200-16927237)
chr1 (30-79)||(23621963-23622012)
chr1 (93-126)||(25934573-25934606)
chr1 (12-53)||(28663626-28663667)
chr1 (12-53)||(30173762-30173803)
chr1 (20-64)||(11605943-11605987)
chr1 (12-52)||(15449232-15449272)
chr1 (11-51)||(30749860-30749900)
chr1 (11-51)||(30771311-30771351)
chr1 (12-56)||(34371728-34371772)
[»] chr5 (73 HSPs)
chr5 (12-122)||(13287399-13287509)
chr5 (12-126)||(21522695-21522809)
chr5 (12-126)||(21533261-21533375)
chr5 (11-114)||(21191055-21191158)
chr5 (11-126)||(15382422-15382539)
chr5 (12-126)||(19579646-19579760)
chr5 (11-105)||(6247588-6247682)
chr5 (13-86)||(21351906-21351979)
chr5 (14-126)||(17177025-17177137)
chr5 (19-126)||(6326304-6326411)
chr5 (12-87)||(10298553-10298628)
chr5 (15-125)||(41995417-41995525)
chr5 (12-117)||(21541984-21542089)
chr5 (13-78)||(42893353-42893418)
chr5 (12-112)||(37328844-37328944)
chr5 (35-126)||(6770488-6770579)
chr5 (11-78)||(33178018-33178085)
chr5 (12-87)||(39698525-39698600)
chr5 (17-87)||(14674253-14674323)
chr5 (12-85)||(31084309-31084382)
chr5 (11-70)||(21576744-21576803)
chr5 (11-126)||(24906300-24906415)
chr5 (20-107)||(4105221-4105310)
chr5 (12-74)||(7677702-7677764)
chr5 (12-126)||(30183494-30183608)
chr5 (11-87)||(8420011-8420087)
chr5 (19-97)||(15405062-15405138)
chr5 (12-126)||(6401443-6401557)
chr5 (13-78)||(30135306-30135372)
chr5 (12-78)||(41633728-41633794)
chr5 (27-112)||(22013373-22013458)
chr5 (13-126)||(36642763-36642875)
chr5 (11-73)||(15883985-15884048)
chr5 (12-126)||(25888293-25888409)
chr5 (15-64)||(43001807-43001856)
chr5 (12-76)||(5894833-5894897)
chr5 (16-64)||(7218271-7218319)
chr5 (11-86)||(14422889-14422962)
chr5 (11-87)||(16203794-16203870)
chr5 (11-63)||(28588673-28588725)
chr5 (12-68)||(40131624-40131680)
chr5 (12-86)||(3966488-3966562)
chr5 (38-100)||(19552569-19552631)
chr5 (11-112)||(19820395-19820494)
chr5 (92-126)||(34276802-34276836)
chr5 (11-61)||(43564891-43564941)
chr5 (39-76)||(18316952-18316989)
chr5 (11-64)||(30502387-30502440)
chr5 (11-64)||(30542730-30542783)
chr5 (12-64)||(6471889-6471941)
chr5 (16-72)||(12159951-12160007)
chr5 (19-78)||(17088277-17088337)
chr5 (18-78)||(31264431-31264491)
chr5 (36-108)||(41558707-41558779)
chr5 (39-126)||(17122994-17123080)
chr5 (23-78)||(22299492-22299546)
chr5 (18-126)||(23015995-23016105)
chr5 (36-78)||(22611761-22611803)
chr5 (27-85)||(24273045-24273103)
chr5 (27-85)||(24389111-24389169)
chr5 (11-73)||(27932233-27932295)
chr5 (19-73)||(38464371-38464425)
chr5 (12-85)||(2436908-2436981)
chr5 (40-126)||(3751958-3752049)
chr5 (18-63)||(5467984-5468029)
chr5 (12-53)||(12199948-12199989)
chr5 (11-63)||(2548395-2548447)
chr5 (82-122)||(20683330-20683370)
chr5 (42-78)||(26609346-26609382)
chr5 (12-64)||(36838550-36838602)
chr5 (35-63)||(40000558-40000586)
chr5 (12-64)||(41091257-41091309)
chr5 (67-107)||(42463496-42463536)
[»] chr7 (75 HSPs)
chr7 (13-125)||(11061077-11061189)
chr7 (11-126)||(25481847-25481962)
chr7 (12-117)||(24339596-24339701)
chr7 (12-112)||(27945000-27945100)
chr7 (12-126)||(5409836-5409950)
chr7 (12-77)||(3991318-3991383)
chr7 (12-85)||(9408334-9408407)
chr7 (12-126)||(9778453-9778559)
chr7 (12-126)||(13770636-13770750)
chr7 (12-131)||(35861898-35862023)
chr7 (11-78)||(8234139-8234206)
chr7 (12-87)||(18215186-18215261)
chr7 (10-112)||(24105638-24105739)
chr7 (12-84)||(32094020-32094093)
chr7 (12-97)||(43027469-43027554)
chr7 (13-73)||(7438704-7438764)
chr7 (12-73)||(11272586-11272649)
chr7 (11-126)||(21880099-21880212)
chr7 (16-64)||(26033465-26033513)
chr7 (12-87)||(10042921-10042996)
chr7 (11-126)||(21826218-21826333)
chr7 (11-122)||(26733253-26733364)
chr7 (12-126)||(1433399-1433513)
chr7 (13-71)||(11665441-11665499)
chr7 (12-126)||(18038945-18039058)
chr7 (13-107)||(19206014-19206108)
chr7 (12-78)||(25822648-25822714)
chr7 (12-125)||(1885519-1885632)
chr7 (11-84)||(20549778-20549851)
chr7 (12-125)||(21140982-21141095)
chr7 (25-126)||(29763187-29763288)
chr7 (12-68)||(7058429-7058485)
chr7 (35-107)||(11722121-11722193)
chr7 (22-78)||(11831425-11831481)
chr7 (14-126)||(17851376-17851488)
chr7 (11-79)||(28155562-28155630)
chr7 (11-78)||(7197296-7197363)
chr7 (21-115)||(13557750-13557847)
chr7 (11-86)||(15680794-15680869)
chr7 (12-71)||(19992001-19992060)
chr7 (27-98)||(22868015-22868086)
chr7 (27-98)||(29787384-29787455)
chr7 (13-84)||(33994199-33994270)
chr7 (11-78)||(40287356-40287422)
chr7 (13-71)||(13300410-13300468)
chr7 (12-85)||(21560484-21560562)
chr7 (11-98)||(21864779-21864868)
chr7 (11-131)||(18213032-18213153)
chr7 (11-64)||(19213810-19213863)
chr7 (11-87)||(9482918-9482994)
chr7 (12-63)||(2334256-2334309)
chr7 (12-126)||(22602710-22602824)
chr7 (12-126)||(26329382-26329496)
chr7 (28-126)||(30730982-30731080)
chr7 (28-86)||(32308105-32308163)
chr7 (12-85)||(6630912-6630985)
chr7 (18-107)||(43249957-43250046)
chr7 (13-73)||(5835245-5835305)
chr7 (14-98)||(15902795-15902879)
chr7 (13-57)||(48438560-48438604)
chr7 (13-64)||(1401032-1401083)
chr7 (12-63)||(11890919-11890970)
chr7 (12-71)||(18013074-18013133)
chr7 (27-126)||(1656629-1656720)
chr7 (38-76)||(4024022-4024060)
chr7 (25-87)||(23191880-23191942)
chr7 (14-72)||(41020495-41020553)
chr7 (27-64)||(2424621-2424658)
chr7 (11-64)||(3721100-3721153)
chr7 (12-97)||(49107795-49107879)
chr7 (13-109)||(598170-598266)
chr7 (12-64)||(7328691-7328743)
chr7 (14-50)||(18035866-18035902)
chr7 (36-76)||(23746905-23746945)
chr7 (20-64)||(30813819-30813863)
[»] chr3 (81 HSPs)
chr3 (10-126)||(10335284-10335400)
chr3 (11-126)||(16000015-16000130)
chr3 (12-126)||(15796294-15796408)
chr3 (12-126)||(750618-750733)
chr3 (11-126)||(21479069-21479178)
chr3 (12-107)||(28917965-28918060)
chr3 (11-106)||(55401040-55401135)
chr3 (11-84)||(10954939-10955012)
chr3 (18-126)||(35994744-35994851)
chr3 (11-106)||(8587020-8587115)
chr3 (20-126)||(3164033-3164139)
chr3 (12-78)||(34910310-34910376)
chr3 (14-85)||(20503451-20503522)
chr3 (12-107)||(41961650-41961745)
chr3 (12-126)||(4990967-4991081)
chr3 (12-78)||(14209106-14209172)
chr3 (12-78)||(28812508-28812574)
chr3 (15-84)||(4987294-4987363)
chr3 (11-112)||(8383216-8383317)
chr3 (13-126)||(10268487-10268600)
chr3 (11-76)||(51206352-51206417)
chr3 (12-76)||(1509534-1509598)
chr3 (12-126)||(14747512-14747621)
chr3 (18-126)||(24205047-24205155)
chr3 (15-71)||(26508110-26508166)
chr3 (11-126)||(7171447-7171561)
chr3 (11-98)||(26492204-26492291)
chr3 (11-76)||(7928445-7928510)
chr3 (12-85)||(14829676-14829748)
chr3 (12-73)||(49651786-49651847)
chr3 (12-96)||(14216867-14216951)
chr3 (12-96)||(14222996-14223080)
chr3 (11-86)||(25775493-25775569)
chr3 (18-126)||(34307786-34307894)
chr3 (16-71)||(21256990-21257045)
chr3 (11-126)||(25093447-25093562)
chr3 (12-126)||(11665889-11666003)
chr3 (12-78)||(34185123-34185189)
chr3 (12-73)||(27505244-27505305)
chr3 (14-86)||(17005621-17005693)
chr3 (12-64)||(25948887-25948939)
chr3 (10-126)||(10318033-10318154)
chr3 (12-126)||(39756187-39756295)
chr3 (12-78)||(14832092-14832158)
chr3 (11-71)||(8593136-8593197)
chr3 (28-73)||(14979179-14979224)
chr3 (36-85)||(40052318-40052367)
chr3 (38-98)||(2620079-2620139)
chr3 (11-87)||(18426933-18427009)
chr3 (18-78)||(29508437-29508497)
chr3 (10-126)||(38731163-38731279)
chr3 (11-78)||(8789549-8789616)
chr3 (14-73)||(55212961-55213020)
chr3 (13-126)||(3610578-3610691)
chr3 (12-97)||(9800014-9800099)
chr3 (19-64)||(11610528-11610573)
chr3 (81-126)||(14027960-14028005)
chr3 (91-128)||(17568749-17568786)
chr3 (35-87)||(8412968-8413020)
chr3 (12-80)||(15314876-15314944)
chr3 (27-78)||(12704000-12704051)
chr3 (13-72)||(22774071-22774130)
chr3 (11-78)||(35222931-35222998)
chr3 (13-55)||(3865690-3865732)
chr3 (11-87)||(32400707-32400780)
chr3 (11-85)||(33359747-33359821)
chr3 (11-53)||(40993334-40993376)
chr3 (42-87)||(3865586-3865631)
chr3 (27-64)||(11251985-11252022)
chr3 (27-76)||(11313815-11313864)
chr3 (27-72)||(11493376-11493421)
chr3 (27-100)||(25064880-25064953)
chr3 (13-106)||(32429381-32429474)
chr3 (11-64)||(49505153-49505206)
chr3 (12-64)||(1550147-1550199)
chr3 (27-63)||(4201404-4201440)
chr3 (12-76)||(7614415-7614479)
chr3 (12-64)||(8039835-8039887)
chr3 (27-119)||(16192765-16192857)
chr3 (38-85)||(21305231-21305279)
chr3 (37-73)||(24633764-24633800)
[»] scaffold0053 (1 HSPs)
scaffold0053 (11-126)||(8743-8858)
[»] scaffold0027 (1 HSPs)
scaffold0027 (12-126)||(46627-46741)
[»] chr8 (62 HSPs)
chr8 (12-126)||(22651921-22652035)
chr8 (14-126)||(29510306-29510418)
chr8 (12-126)||(2572056-2572170)
chr8 (13-126)||(22197743-22197856)
chr8 (11-87)||(36450753-36450829)
chr8 (11-126)||(926787-926902)
chr8 (12-87)||(15816129-15816204)
chr8 (12-112)||(13436964-13437064)
chr8 (11-107)||(18170481-18170577)
chr8 (11-107)||(18634049-18634145)
chr8 (12-76)||(25566836-25566900)
chr8 (11-66)||(4948657-4948712)
chr8 (11-98)||(20873042-20873129)
chr8 (12-76)||(8342967-8343031)
chr8 (11-83)||(24613509-24613580)
chr8 (13-126)||(4298887-4298993)
chr8 (12-78)||(8343309-8343375)
chr8 (13-126)||(4673426-4673538)
chr8 (11-84)||(22595981-22596054)
chr8 (11-126)||(24413558-24413674)
chr8 (12-126)||(24857954-24858070)
chr8 (13-72)||(29447111-29447170)
chr8 (12-87)||(30271291-30271366)
chr8 (14-76)||(31514867-31514930)
chr8 (13-119)||(28384995-28385101)
chr8 (11-64)||(30077386-30077439)
chr8 (11-87)||(5813576-5813652)
chr8 (15-87)||(25192350-25192422)
chr8 (13-113)||(31556955-31557054)
chr8 (14-62)||(40332200-40332248)
chr8 (18-126)||(44067461-44067569)
chr8 (11-125)||(4786337-4786445)
chr8 (18-73)||(18407717-18407772)
chr8 (27-126)||(24362217-24362316)
chr8 (18-73)||(41831946-41832001)
chr8 (12-72)||(17468508-17468568)
chr8 (12-76)||(21465407-21465471)
chr8 (11-71)||(44694791-44694851)
chr8 (12-63)||(11927086-11927137)
chr8 (11-78)||(13844595-13844662)
chr8 (13-64)||(20679396-20679447)
chr8 (12-63)||(24669441-24669492)
chr8 (27-126)||(36934615-36934714)
chr8 (20-87)||(41838131-41838198)
chr8 (11-64)||(3025558-3025611)
chr8 (37-106)||(3677751-3677820)
chr8 (14-87)||(7442829-7442902)
chr8 (14-119)||(7658415-7658520)
chr8 (12-81)||(11944655-11944724)
chr8 (11-64)||(34897092-34897145)
chr8 (13-65)||(14134705-14134757)
chr8 (43-87)||(24196628-24196672)
chr8 (15-78)||(31236580-31236643)
chr8 (27-126)||(37283825-37283924)
chr8 (27-77)||(4611528-4611578)
chr8 (81-126)||(43737882-43737927)
chr8 (13-85)||(9414876-9414948)
chr8 (29-73)||(22493492-22493536)
chr8 (38-78)||(27101508-27101548)
chr8 (12-64)||(28745505-28745557)
chr8 (11-63)||(33405383-33405435)
chr8 (38-70)||(35519833-35519865)
[»] chr2 (63 HSPs)
chr2 (12-126)||(30335362-30335476)
chr2 (19-126)||(21374706-21374808)
chr2 (12-119)||(15657816-15657923)
chr2 (12-125)||(23058442-23058556)
chr2 (11-126)||(2438718-2438830)
chr2 (11-106)||(19536396-19536492)
chr2 (12-126)||(34784982-34785096)
chr2 (11-87)||(15972857-15972933)
chr2 (12-112)||(20539674-20539774)
chr2 (11-87)||(37558961-37559037)
chr2 (12-87)||(18421947-18422022)
chr2 (12-87)||(30717530-30717605)
chr2 (13-126)||(26769462-26769569)
chr2 (13-86)||(18841014-18841087)
chr2 (12-72)||(974746-974806)
chr2 (11-87)||(30404849-30404925)
chr2 (13-125)||(34337182-34337289)
chr2 (39-126)||(31283993-31284080)
chr2 (12-115)||(36756344-36756447)
chr2 (12-78)||(12668423-12668489)
chr2 (27-125)||(21616708-21616806)
chr2 (11-85)||(38117158-38117232)
chr2 (27-126)||(28412295-28412394)
chr2 (13-71)||(11223864-11223922)
chr2 (18-96)||(12940941-12941019)
chr2 (13-127)||(18276465-18276579)
chr2 (11-73)||(20473320-20473382)
chr2 (13-98)||(21091696-21091781)
chr2 (11-111)||(21624226-21624327)
chr2 (15-87)||(23718010-23718082)
chr2 (15-87)||(24105682-24105754)
chr2 (16-87)||(6940239-6940310)
chr2 (13-87)||(14996224-14996299)
chr2 (11-86)||(20242726-20242801)
chr2 (20-87)||(24894373-24894440)
chr2 (12-87)||(37419727-37419802)
chr2 (12-78)||(33153417-33153483)
chr2 (11-73)||(5040730-5040794)
chr2 (13-78)||(42832277-42832342)
chr2 (11-78)||(18255979-18256046)
chr2 (14-85)||(31808063-31808134)
chr2 (11-65)||(5367198-5367252)
chr2 (27-73)||(28677907-28677953)
chr2 (27-84)||(21782833-21782890)
chr2 (11-64)||(34691804-34691857)
chr2 (11-64)||(34714216-34714269)
chr2 (12-69)||(38442309-38442366)
chr2 (19-64)||(39323271-39323316)
chr2 (12-126)||(44860273-44860379)
chr2 (12-64)||(4882696-4882748)
chr2 (75-126)||(18631462-18631513)
chr2 (14-85)||(29176495-29176566)
chr2 (14-64)||(18420436-18420486)
chr2 (11-49)||(44635520-44635558)
chr2 (11-68)||(5473331-5473388)
chr2 (12-65)||(18622612-18622665)
chr2 (93-126)||(27447082-27447115)
chr2 (35-107)||(27459991-27460063)
chr2 (12-73)||(37411244-37411305)
chr2 (14-63)||(44605141-44605190)
chr2 (37-65)||(11670761-11670789)
chr2 (11-64)||(12224228-12224283)
chr2 (17-73)||(34221502-34221558)
[»] scaffold0652 (1 HSPs)
scaffold0652 (11-125)||(461-575)
[»] scaffold0021 (1 HSPs)
scaffold0021 (15-126)||(130427-130538)
[»] scaffold0223 (1 HSPs)
scaffold0223 (12-106)||(20137-20231)
[»] scaffold0018 (2 HSPs)
scaffold0018 (13-100)||(178819-178907)
scaffold0018 (19-87)||(192256-192324)
[»] scaffold0011 (1 HSPs)
scaffold0011 (13-88)||(17750-17825)
[»] scaffold0306 (1 HSPs)
scaffold0306 (11-112)||(13359-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (11-112)||(21867-21968)
[»] scaffold0103 (1 HSPs)
scaffold0103 (20-87)||(51795-51862)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-107)||(241558-241653)
[»] scaffold0361 (1 HSPs)
scaffold0361 (21-78)||(14523-14580)
[»] scaffold0793 (1 HSPs)
scaffold0793 (13-81)||(4884-4953)
[»] scaffold0025 (1 HSPs)
scaffold0025 (12-87)||(23753-23829)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-126)||(225274-225382)
[»] scaffold0171 (2 HSPs)
scaffold0171 (12-126)||(23372-23479)
scaffold0171 (12-84)||(23497-23570)
[»] scaffold0122 (2 HSPs)
scaffold0122 (11-78)||(8003-8069)
scaffold0122 (12-118)||(8619-8725)
[»] scaffold0246 (1 HSPs)
scaffold0246 (20-98)||(19549-19626)
[»] scaffold0116 (1 HSPs)
scaffold0116 (12-126)||(9843-9957)
[»] scaffold0450 (1 HSPs)
scaffold0450 (12-73)||(8635-8696)
[»] scaffold0050 (1 HSPs)
scaffold0050 (11-72)||(70277-70338)
[»] scaffold0020 (1 HSPs)
scaffold0020 (12-85)||(135312-135385)
[»] scaffold0004 (3 HSPs)
scaffold0004 (19-87)||(92791-92859)
scaffold0004 (13-84)||(123612-123686)
scaffold0004 (12-59)||(83172-83219)
[»] scaffold0136 (1 HSPs)
scaffold0136 (12-63)||(3849-3900)
[»] scaffold0227 (1 HSPs)
scaffold0227 (20-78)||(7319-7377)
[»] scaffold0066 (1 HSPs)
scaffold0066 (24-78)||(33375-33429)
[»] scaffold0722 (1 HSPs)
scaffold0722 (11-72)||(7031-7092)
[»] scaffold0083 (1 HSPs)
scaffold0083 (11-98)||(45529-45617)
[»] scaffold0019 (1 HSPs)
scaffold0019 (12-85)||(71709-71784)
[»] scaffold0049 (1 HSPs)
scaffold0049 (13-64)||(63780-63831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (15-62)||(53189-53236)
[»] scaffold0022 (1 HSPs)
scaffold0022 (27-106)||(90808-90887)
[»] scaffold0008 (1 HSPs)
scaffold0008 (12-115)||(263372-263475)
[»] scaffold0311 (1 HSPs)
scaffold0311 (50-87)||(10509-10546)
[»] scaffold0036 (1 HSPs)
scaffold0036 (12-65)||(9747-9800)
[»] scaffold1528 (1 HSPs)
scaffold1528 (30-78)||(1028-1076)
[»] scaffold0236 (1 HSPs)
scaffold0236 (12-63)||(25768-25819)
[»] scaffold0126 (1 HSPs)
scaffold0126 (12-127)||(19089-19203)
[»] scaffold0009 (2 HSPs)
scaffold0009 (14-53)||(174555-174594)
scaffold0009 (14-53)||(180068-180107)
[»] scaffold0057 (1 HSPs)
scaffold0057 (25-78)||(24018-24071)
[»] scaffold0314 (1 HSPs)
scaffold0314 (13-57)||(8962-9006)
[»] scaffold0123 (1 HSPs)
scaffold0123 (16-64)||(44529-44577)
[»] scaffold0085 (1 HSPs)
scaffold0085 (36-72)||(26392-26428)


Alignment Details
Target: chr6 (Bit Score: 170; Significance: 2e-91; HSPs: 92)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 7801152 - 7801356
Alignment:
Q  8 gtcccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||           |||||||||    
T  7801152 gtcccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttcg-----------gtatccgtg 7801240  T
Q  108 tccgtatccgtgcttcatatgtgactgtgatatggatatgtttaattttcttcttgatcccattgaacaacatgaatttgtgaccgagtctgttggtgat 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7801241 tccgtatccgtgcttcatatgtgactgtgatatggatatgtttaattttcttcttgatcccattgaacaacatgaatttgtgaccgagtctgttggtgat 7801340  T
Q  208 aaagcacaaactttaa 223  Q
    ||||||||||||||||    
T  7801341 aaagcacaaactttaa 7801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 9107370 - 9107484
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||| |||||||| |    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcag 9107469  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  9107470 tatccgtgcttcata 9107484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 8776972 - 8777087
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| |||||||| || ||||||| | |||||||||    
T  8776972 ccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtcc 8777071  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  8777072 gtatccgtgcttcata 8777087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 16766756 - 16766641
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||  || ||||||||| ||||||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccg 16766657  T
Q  112 tatccgtgcttcatat 127  Q
    ||||| ||||||||||    
T  16766656 tatccatgcttcatat 16766641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 426513 - 426628
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||||  |||||||| |||| |||||||| || ||||||||||||||||||     
T  426513 ccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtct 426612  T
Q  111 gtatccgtgcttcata 126  Q
    |||||| |||||||||    
T  426613 gtatccatgcttcata 426628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 7938174 - 7938061
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||||| ||||||| || |||||| |||||||||||||||||||| |||||||| |||| |||||||  || ||||||||| |||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgt 7938075  T
Q  113 atccgtgcttcata 126  Q
    ||||||||||||||    
T  7938074 atccgtgcttcata 7938061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 34595194 - 34595098
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | |||||| || ||||||||| ||||||    
T  34595194 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtg 34595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 1681811 - 1681703
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||  | || |||| |||| || ||||| |||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccg 1681712  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  1681711 tgcttcata 1681703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 7977829 - 7977940
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||| ||| |||  || |||||| || |||||||||    
T  7977829 ccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtcc 7977928  T
Q  111 gtatccgtgctt 122  Q
     |||||||||||    
T  7977929 atatccgtgctt 7977940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 15489733 - 15489845
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    |||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||  ||  |||||||||     
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtcatgt-gccgtgtccgc 15489831  T
Q  113 atccgtgcttcata 126  Q
    ||||||||||||||    
T  15489832 atccgtgcttcata 15489845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 8365519 - 8365619
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||| |||||||| || ||||| ||| ||||| ||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccg 8365618  T
Q  112 t 112  Q
    |    
T  8365619 t 8365619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 10770674 - 10770768
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||| |||||||  || |||||| |||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtcc-gtatccgtg 10770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 853858 - 853959
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||| |||| ||  |||| || ||||||||| ||||| |||    
T  853858 ccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatcc 853957  T
Q  111 gt 112  Q
    ||    
T  853958 gt 853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 16833365 - 16833281
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| |||||| | || |||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 12696383 - 12696277
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||| ||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||| |||||||| || |||       ||||||||||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtg-------tccgtgtccg 12696291  T
Q  112 tatccgtgcttcat 125  Q
    ||||||||||||||    
T  12696290 tatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 9027237 - 9027123
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| | ||||||||||||| | ||||||||||||  ||||||| |||| |||||||| || ||||||||  ||||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccg 9027138  T
Q  112 tatccgtgcttcata 126  Q
    |||| ||||||||||    
T  9027137 tatcggtgcttcata 9027123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 17841588 - 17841664
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||||||| |||| ||||||||    
T  17841588 ccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 17841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 3209442 - 3209327
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    |||||||||||||||||||| || || |||||||||||| ||||||||||||||| |||||||| ||||  |||| || || ||||||||| |||||||     
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccggtgtccgtgtt 3209344  T
Q  110 cgtatccgtgcttcata 126  Q
     ||||||||||| ||||    
T  3209343 tgtatccgtgctacata 3209327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 28152158 - 28152083
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||| |||| ||||||||    
T  28152158 ccgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtccg 28152083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 31384979 - 31384923
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgt 68  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31384979 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 4878003 - 4877891
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    ||||||||||||||||||||||  || |||||||||| ||||||||||||||||| ||||||||||||| | | |||| || |||| |||    ||||||    
T  4878003 ccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgttcgg----cgtgtc 4877908  T
Q  110 cgtatccgtgcttcata 126  Q
    |||||| ||||||||||    
T  4877907 cgtatctgtgcttcata 4877891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 28715355 - 28715256
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||        ||||||||  | ||||||||| |||||||||    
T  28715355 ccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtc--------agtgtccgtatcgtgtccggtgtccgtgtcc 28715264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 100
Target Start/End: Complemental strand, 7930364 - 7930276
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggt 100  Q
    ||||||||||||||| |||| | || |||||||||||||||||||||||||| |||||||||  ||| ||||||||   ||||||||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggt 7930276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 5970108 - 5970216
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||||||||  |||||||        ||||||| ||  |||||||| ||||||||||    
T  5970108 cgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcg------acgtgtccgtgtcatgtccggtgtccgtgtccg 5970201  T
Q  112 tatccgtgcttcata 126  Q
    |||| ||||||||||    
T  5970202 tatctgtgcttcata 5970216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 31959213 - 31959146
Alignment:
Q  17 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||| |||| ||| |||| |||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 7801352 - 7801394
Alignment:
Q  148 tttaattttcttcttgatcccattgaacaacatgaatttgtga 190  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7801352 tttaattttcttcttgatcccattgaacaacatgaatttgtga 7801394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 9522948 - 9522898
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 18367895 - 18367782
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| ||| ||| ||||||||| | |||  ||||| |||||||| ||||  ||||||  || ||||||||| ||||||||||    
T  18367895 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccggtgtccgtgtccg 18367797  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  18367796 tatccgtgcttcata 18367782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 25010212 - 25010262
Alignment:
Q  22 acttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtgtcg 25010262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 7265592 - 7265669
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccga 88  Q
    ||||||||||||| | ||||||| ||||||||||||||||| ||||||||||||  |||| || |||| |||||||||    
T  7265592 ccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccga 7265669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 403863 - 403915
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  403863 ccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 5732509 - 5732621
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||| | ||||||| || || ||||||||||| |||||||||||   ||||||| |||| |||||||  || |||||| || ||||||||     
T  5732509 ccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgtct 5732608  T
Q  111 gtatccgtgcttc 123  Q
    |||||| ||||||    
T  5732609 gtatccatgcttc 5732621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 32978898 - 32978966
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtg-attttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||||||||||| || |||||||||  ||||||||||||||||| |||||||| ||||    
T  32978898 ccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcgtgt 32978966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 1191706 - 1191761
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||| ||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcgg 1191761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 3398677 - 3398603
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||| |||| ||||||| ||||||||| |||||||| ||||||||||| |||||||| |||| ||||||||    
T  3398677 cgacaccgatacttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtgtccg 3398603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 4118341 - 4118444
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtg 119  Q
    ||||||||||||||  | ||||||||||||||||||||||||||  | | |||  |||||| | | || || ||||||||| |||||||||||||| |||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattattaactatatcgtcgtgttaatatacgtgtcgtgtccggtgtccgtgtccgtatcagtg 4118440  T
Q  120 cttc 123  Q
    ||||    
T  4118441 cttc 4118444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 6898280 - 6898355
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    ||||||||||||||||||||||| || |||||||| |||| |||||||||||||  ||||| | |||| |||||||    
T  6898280 ccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtcc 6898355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 9911528 - 9911587
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattt-tttcaaattattagttgtgt 70  Q
    |||||||||||||||||||||| |||||||||||||||| ||| |||||||||| |||||    
T  9911528 cgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 20371110 - 20371220
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | |||| ||  ||| |||||||||||| ||||||||||||  ||||||| |||| | |||||     ||||||||| || |||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtcc-----gtgtccggtttctgtgtccg 20371204  T
Q  112 tatccgtgcttcatat 127  Q
    ||||||||||||||||    
T  20371205 tatccgtgcttcatat 20371220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 33001288 - 33001375
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||||||||||| | |||||||  | |||||||||||||||||||||||||||  ||||||| |||| | || ||| ||||||||||    
T  33001288 ccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtccg 33001375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 10294166 - 10294052
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | |||||||  |||| |||| |||| | ||||||||||||  || ||||  ||| ||| |||| || ||||||||| | ||||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccg 10294067  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  10294066 tatccgtgcttcata 10294052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 17302609 - 17302543
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||||||||| | |||| |||||    
T  17302609 gacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgt 17302543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 21395308 - 21395421
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| || |||||||| ||||| ||||||||||||  |||| || ||||  ||||||  ||  | |||||| || ||||| |    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgtgtctg 21395406  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  21395407 tatccgtgcttcata 21395421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 34225824 - 34225915
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||        |||||||   | |||||| || |||||||||||||||||||||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgtc--------agtgtccttatcgtgtccagtgtccgtgtccgtatccgtgcttcata 34225915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 7027301 - 7027224
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgttagtgtccga 88  Q
    |||||||||||| | ||||||| ||||||||||||||| |||||||||||| ||  ||||||| || |||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgtattagtgtccga 7027224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 19044522 - 19044449
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    ||||||||||| | |||| || |||||||||||||| || ||||||||||||| ||||||| |||| |||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtcc 19044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 25096469 - 25096372
Alignment:
Q  25 tgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgctt 122  Q
    ||||||||| ||  ||||||||||||| ||||||||||||| ||||||  ||||  ||||| | ||||| |||| | ||||||||||||| |||||||    
T  25096469 tgtaattacactagattatgtgattttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgttgtatccgatgtccgtgtccgtatacgtgctt 25096372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 7378039 - 7377930
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||| | |||||||  |||||||||||||||| ||||||| ||||  |||||||       ||||| | |||||||||||| || | ||||    
T  7378039 ccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcgg------ggtgtctgtgttgtgtccggtgtctgggtcc 7377946  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  7377945 gtatccgtgcttcata 7377930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 9025494 - 9025546
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||| | ||||||| ||||||||||||||||| ||||||||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 12627576 - 12627652
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||| |||||| | | ||||| ||||||||||||||||||||| ||||||||  || ||||||||||| ||||||    
T  12627576 ccgacatcgacacatattattacactgaattatgtgattttttcacattattaggagtttcggtgtgttactgtccg 12627652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 24645539 - 24645479
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcg 72  Q
    ||||||||||||||||| ||  ||||||||||||||| ||||||||||||||| |||||||    
T  24645539 gacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtcg 24645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 19040412 - 19040345
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||| ||||| | ||||||| ||||||||||||||||| ||||||||||||  ||||||| ||||    
T  19040412 ccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 34290092 - 34290191
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||| |  ||||||||||||||||||||  ||| |||||  | ||  | |||||| || ||||||||||| ||||||||||    
T  34290092 taattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtcttatccggtgtctgtgtccgtatctgtgcttcata 34290191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 1700412 - 1700362
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattat 61  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||| |||||||    
T  1700412 ccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 9658936 - 9658854
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtc 96  Q
    |||||||||  | ||||||| ||||||||||||||||| | ||||||||||  ||||||| |||| |||||||| || |||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 17327655 - 17327769
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||| ||||| | || |||| || |||||||||||||| ||||| | ||||||||||||| || | | ||||   || ||||||||||||||||  ||    
T  17327655 cgacactgacacatatagttacactaaattatgtgattttctcaaaatcttagttgtgtcggcgtatcactgtctatgtcgtgtccggtatccgtggtcg 17327754  T
Q  112 tatccgtgcttcata 126  Q
    |||||||| ||||||    
T  17327755 tatccgtggttcata 17327769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 24115871 - 24115961
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||||||||||||||| ||||||||||||||||| | |||| |||| |   || |||| |||| || ||||| |||||||| |||||||    
T  24115871 tgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtgcctatgtcgtgttcggtgtctgtgtctgtatccgtacttcata 24115961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 8714039 - 8713978
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcg 72  Q
    ||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||  |||||||    
T  8714039 cgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcg 8713978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 13851794 - 13851681
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    |||| |||||| | ||||||| |||||||| || ||||| ||||||||||||  ||||||  |||| |||||||| || |||| |  | ||||||||||     
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgtccga 13851695  T
Q  113 atccgtgcttcata 126  Q
    | ||||||||||||    
T  13851694 acccgtgcttcata 13851681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 32511665 - 32511718
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||| |||||| ||||||| ||||||||||||||||| | ||||||||||    
T  32511665 ccgacaccaacacttataattacactgaattatgtgattttcttaaattattag 32511718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 2117129 - 2117069
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||| ||||| |  |||||||||||||||||||||||||||||  ||||||| ||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattagaggtgtcggagtgt 2117069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 6327517 - 6327569
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||| |||||||||||||||| || |||||| | |||||||||||||||||    
T  6327517 ccgacatcgacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 7151471 - 7151419
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| |||| | ||||||| || |||||||||||||||||||||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 17435250 - 17435206
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||||| ||||||||||| ||||||| ||||||||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattag 17435206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 9195754 - 9195821
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgtt 79  Q
    |||||||||||| | ||||||| || |||||||| ||||| ||||||||||||  |||||| ||||||    
T  9195754 cgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgtt 9195821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 9617493 - 9617442
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||||||||| | |||||||  |||||||||||||||| |||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 9629443 - 9629392
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatt 62  Q
    ||||||||||||| | |||||||  |||||||||||||||| ||||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 10339149 - 10339240
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||||||||||||| |||||||| | |  ||||||| |||| ||||| |  || |||||| || ||| |||| ||||||||||||||||    
T  10339149 ctgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccgtgcttcata 10339240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 13360373 - 13360432
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    |||||||| || | ||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcg 13360432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattatt 62  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 19147431 - 19147478
Alignment:
Q  40 ttatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||| |||||||||||| |||||| |||||| ||||||||    
T  19147431 ttatgtgattttctcaaattattagctgtgtccgtgtgtcagtgtccg 19147478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 7086852 - 7086802
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||| | ||||||| || |||||||||||||| ||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattag 7086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Original strand, 7996378 - 7996452
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    |||||||||| | | ||||||| ||||||||| ||||||| ||||||||||||  |||||||  ||| |||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtcc 7996452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 8022423 - 8022349
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    |||||||||| | | ||||||| ||||||||| ||||||| ||||||||||||  |||||||  ||| |||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtcc 8022349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 21924934 - 21924996
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||||||||| | ||||||| ||||||||| |||| || ||||||||||||  |||||||    
T  21924934 ccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcgg 21924996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 26402679 - 26402721
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||    
T  26402679 ccgacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 26562748 - 26562682
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||| |||||| | ||||||| ||||||||||||||||| ||||||| ||||  ||||||| ||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgt 26562682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 6349745 - 6349798
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||| |||||||||  |||||||||| ||||||||||||||||| || ||||||    
T  6349745 acacatgtaattacaatgaattatgtaattttttcaaattattaattatgtcgg 6349798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 10842574 - 10842525
Alignment:
Q  29 attacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||| || |||||||||||||||||||||||||||  ||||||| ||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 10842525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 27904037 - 27904113
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtg--attttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||| |||||||||| ||||||||||||   |||||| |||||||||| | |||||| |||| | ||||||    
T  27904037 gacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtcggcgtgtcaatgtccg 27904113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 30866149 - 30866210
Alignment:
Q  17 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||| | |||||||  |||||||||||||||| ||||||||||||  |||| |||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgt 30866210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 31579226 - 31579276
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    ||||||||||||| |  |||||| ||||||||||||||||| |||||||||||    
T  31579226 ccgacaccgacacat--aattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 31673543 - 31673604
Alignment:
Q  69 gtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcatatgtg 130  Q
    ||||| ||||| ||||||| |  ||||||||| |||||||||||||||||||| || |||||    
T  31673543 gtcggcgtgtttgtgtccgtgccgtgtccggtgtccgtgtccgtatccgtgctccacatgtg 31673604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 6214619 - 6214547
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    |||||||||||| | ||||||| || ||||||||| |||||| |||||| |||  || |||| ||||||||||    
T  6214619 cgacaccgacacatctaattacacttaattatgtgtttttttaaaattactagcggtatcggcgtgttagtgt 6214547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 7723250 - 7723302
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||| || | |||||| |||||||||| ||||||| ||||||||||||    
T  7723250 cgacaccgatacatataattatgctgaattatatgattttctcaaattattag 7723302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 7973713 - 7973665
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaatta 60  Q
    |||||||||||||| ||||||| || |||||||| ||||||| ||||||    
T  7973713 cgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 43
Target Start/End: Original strand, 16388216 - 16388248
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattat 43  Q
    ||||||||||||||||||||||| |||||||||    
T  16388216 ccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 23771638 - 23771563
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||| |||||||||| ||||| ||| | ||||||| |||||||||  |||||||| ||||  |||||||    
T  23771638 ccgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtccg 23771563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 31429004 - 31429044
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    |||||| ||| |||||||||| |||||||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgatttttt 31429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 32299332 - 32299220
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgta 113  Q
    |||||||||| | ||| |||  |||||||||||||||| |||||||||||   | || ||||||| ||| |  | ||| |||| ||| || ||||| |||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaattattatcagggttggtgtgtcagtatttgtgttatgtctggtgtctgtgtctgta 32299233  T
Q  114 tccgtgcttcata 126  Q
    |||||||||||||    
T  32299232 tccgtgcttcata 32299220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 34073347 - 34073399
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||| | | ||||||| |||||||||| |||||| ||||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattag 34073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 23292985 - 23293100
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||| |||| | |||||| || ||||||||| |||||||||    
T  23292985 ccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtcc 23293084  T
Q  111 gtatccgtgcttcata 126  Q
    ||||| ||||||||||    
T  23293085 gtatctgtgcttcata 23293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 35157986 - 35158091
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||||| ||||||| || ||||||||||||||| |||||||||||||| ||||| |||| |||||||| |||||||||||| |||||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgt 35158085  T
Q  113 atccgt 118  Q
    ||||||    
T  35158086 atccgt 35158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 19482727 - 19482613
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||| |||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||| |||||| | || ||||| ||| || |||| ||    
T  19482727 cgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcg 19482628  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  19482627 tatccgtgcttcata 19482613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 36635368 - 36635269
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||| || |||| ||||||||||| ||||||||| || |||||| ||||| |||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatgcttcata 36635269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 27706185 - 27706286
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtg 119  Q
    |||||||||||||| || |||||||||||||||| ||||||||| ||||||||  |||| |||||||  || ||||| ||| ||||||||||||||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtg 27706284  T
Q  120 ct 121  Q
    ||    
T  27706285 ct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 21945563 - 21945467
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||  ||| |||||| | ||  |||||||| ||||||    
T  21945563 ccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtg 21945467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 49431086 - 49430998
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||||| |||| | ||||||||| |||||||    
T  49431086 ccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccg 49430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 54580022 - 54580082
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  54580022 ccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 12895273 - 12895388
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||||||||| ||||||||| |||| | ||| || || || |||||| ||||| |||    
T  12895273 ccgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtatcc 12895372  T
Q  111 gtatccgtgcttcata 126  Q
    ||||| ||| ||||||    
T  12895373 gtatctgtgtttcata 12895388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 42640589 - 42640477
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatt---ttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    ||||||||||||||||||||||| |||||||||||||||   |||||||||||| || ||||||||       ||||||| |||||||||  | ||||||    
T  42640589 ccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcgg------cgtgtccgtgttgtgtccaatgtccgtg 42640496  T
Q  108 tccgtatccgtgcttcata 126  Q
    |||||||||||||||||||    
T  42640495 tccgtatccgtgcttcata 42640477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 12797337 - 12797412
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| || ||| |||| ||||||||    
T  12797337 ccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccg 12797412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 30299006 - 30298930
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||||||||||| |||||||| |||| ||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccg 30298930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 30327874 - 30327798
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||||||||||| |||||||| |||| ||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccg 30327798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 2361974 - 2362041
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||| ||||||| || |||||||| |||||||||||||||||| |||||||||||||    
T  2361974 ccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgt 2362041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 12708206 - 12708091
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaa-ttattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||| |||||||||||||||| ||||||||| | ||||||| ||| |||||||||||||| | |||| |||||| | || ||||| | | |||||||||    
T  12708206 cgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgtctgatgtccgtgtcc 12708107  T
Q  111 gtatccgtgcttcata 126  Q
    |||| |||||||||||    
T  12708106 gtattcgtgcttcata 12708091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 4157209 - 4157103
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||||||        |||||| | || ||||| ||| |||||||||    
T  4157209 ccgacaccgacacttgtaattgcactaaattatgtgat-ttttcaaattattagttgtgtc--------agtgtctgtgtcgtgtctggtgtccgtgtcc 4157119  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  4157118 gtatccgtgcttcata 4157103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 12895116 - 12895182
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||| ||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgt 12895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 20633535 - 20633430
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    ||||||||||||||||  ||||||||||   ||||||||||||||||  ||||||  |||| ||||||||  | ||||| ||| ||||||||||||||||    
T  20633535 cgacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccg 20633439  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  20633438 tgcttcata 20633430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 29205501 - 29205451
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 715608 - 715677
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttag 81  Q
    |||||| |||||||||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  715608 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 715677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 752934 - 753003
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttag 81  Q
    |||||| |||||||||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  752934 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 753003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 3947766 - 3947827
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  3947766 cgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcgg 3947827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 28964247 - 28964300
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  28964247 ccgacacagacacttgtaattacactgaattatgtgattttttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 38847011 - 38847108
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgt 108  Q
    ||||||| ||||||||||||||| |||||| || |||||||||||||||||||| |||||||| ||||   |||  |||||||||||| | |||||||    
T  38847011 ccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcggagtgtcgatgtttgagttgtgtccgatgtccgtgt 38847108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 11596352 - 11596404
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 11596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 848009 - 847898
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||||||||||||   |||||||||| ||||| ||||||||||||  |  |||| |||| |||||| | || ||||||||  ||| |||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgt 847910  T
Q  113 atccgtgcttca 124  Q
    ||||||||||||    
T  847909 atccgtgcttca 847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 903966 - 903867
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||||| |||||||||||   ||| |||||||| ||||||||  || |||| ||   ||||||||||||||||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgttttatgtctggcgcccgtgtccgtatccgtgcttcata 903867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 24613702 - 24613761
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcg 24613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 16303266 - 16303379
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| || |||||| | ||||||||||| |||||  | |||||| |||| ||||||||  | |||||| |||| ||||| ||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtccagtattcgtgttcg 16303365  T
Q  112 tatccgtgcttcata 126  Q
    ||| |||||||||||    
T  16303366 tat-cgtgcttcata 16303379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 40481687 - 40481610
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||| |||| |||| |||||| | || |||||||    
T  40481687 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 40481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 15029825 - 15029716
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||| |||| | ||||||| |||||||||||||| |||||||||||||||  ||||| | |||| ||||||      ||||||||| ||| |||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc------gtgtccggtctccatgtcc 15029732  T
Q  111 gtatccgtgcttcata 126  Q
    |||||| |||||||||    
T  15029731 gtatccctgcttcata 15029716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 24343560 - 24343452
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||| | ||||||| ||||||||||| ||||| |||||||||||   ||||||| ||||  | ||||| || ||||||||| |||||||| || ||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 24343461  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  24343460 tgcttcata 24343452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 4383426 - 4383352
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||| |||  |||| ||||||||    
T  4383426 cgacactgacatttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcgacgtgtcagtgtccg 4383352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 8423717 - 8423780
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggt 74  Q
    |||||||||||| || ||||||| ||||||||||||||||| ||||||||||||  ||||||||    
T  8423717 ccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcggt 8423780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 16073454 - 16073396
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgt 70  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||||||||| ||||||    
T  16073454 ccgacaccgacacttgtaattacactgaattatgcga-tttttcaaattattacttgtgt 16073396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 28084581 - 28084486
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    |||||| |||||||||||||||  |||||||||||||| |||||||||| |||| |||||||| |||| || ||| | || ||||||||| |||||    
T  28084581 cgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgt 28084486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 34306803 - 34306889
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||||||||||||||||||||| ||  ||||| ||| ||||||||||||||||||||||||| || | |||||| |  |||||||||    
T  34306803 ccgacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcggcgtatcagtgtctgtattgtgtccg 34306889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 51701309 - 51701253
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||||||||| || |||||||| |||||||||||||||||| |||||| ||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtgtccgtgt 51701253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 10499269 - 10499382
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||| ||||| | ||||||| || |||||||||||||| |||| || |||| ||||||||||||| |||||| | | |||||| ||| ||||| ||     
T  10499269 ccgacactgacacatataattacactaaattatgtgattttctcaagtt-ttagatgtgtcggtgtgtcagtgtcagtg-tgtgtctggtgtccgtatct 10499366  T
Q  111 gtatccgtgcttcata 126  Q
    |||||| |||||||||    
T  10499367 gtatccatgcttcata 10499382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 11651142 - 11651209
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||| || | ||||||||||||||||||| |||||||||| |||||||  |||| ||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccg 11651209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 24544038 - 24543967
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtg-attttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||||||||||||||  || |||| ||| ||||||| ||||||||||||||||||| |||| ||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtc 24543967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 30982878 - 30982988
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||| ||||||| ||||| ||||||||||| |||||| |||||  ||   || ||||  ||||||| || || |||||| ||| ||| ||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtatccggtgtccatgttcg 30982974  T
Q  112 tatccgtgcttcat 125  Q
    ||||||||||||||    
T  30982975 tatccgtgcttcat 30982988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 40179635 - 40179746
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||| | | ||||||| ||||||||||||||||||||||| ||||| | |||||   |||| |||||||| ||  ||| |||| || | ||||    
T  40179635 ccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtctgagtcc 40179734  T
Q  111 gtatccgtgctt 122  Q
    |||| |||||||    
T  40179735 gtatgcgtgctt 40179746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 6879464 - 6879510
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaa 57  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  6879464 ccgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 14126118 - 14126184
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||| ||||||| ||||||||||||| ||| |||||||||||   ||||||| |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtc 14126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 31800482 - 31800544
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||||||  | |||||| | ||||||| |||||||||| |||||||||||||    
T  31800482 accgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgt 31800544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 32273526 - 32273584
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgt 70  Q
    ||||| ||| |||| ||||||  ||||||||||| ||||||||||||||||||||||||    
T  32273526 cgacatcgaaacttataattattctgaattatgttattttttcaaattattagttgtgt 32273584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 14465088 - 14465133
Alignment:
Q  25 tgtaattacgctgaattatgtgattttttcaaattattagttgtgt 70  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgt 14465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 50280942 - 50280874
Alignment:
Q  12 cgacaccgacacttgtaattacgc--tgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||| ||||||||||||| |  | |||||||||| |||||||||||||||| |||||||| ||||    
T  50280942 cgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgt 50280874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 37203315 - 37203271
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||||| || |||||||| ||||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattag 37203271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 44081603 - 44081691
Alignment:
Q  38 aattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||| |||||||||||||||||||    | ||||||||| |||||||  || ||||||| | | |||||||||||| ||||||||||    
T  44081603 aattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatcggtgcttcata 44081691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 5775359 - 5775418
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    ||||||||||| | ||||||| || |||||||||||||| ||||||||||| | ||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 13783340 - 13783265
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||| ||| | ||||||| ||||||| |||||| || |||||| |||||  |||||||||||| ||||||||    
T  13783340 cgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccg 13783265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 28000743 - 28000794
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattatta 63  Q
    ||||||||||||||||||||| ||||||||| ||||| |||| |||||||||    
T  28000743 gacaccgacacttgtaattacactgaattatatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 47264044 - 47263993
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||| ||||| |||||||||| | |||||||||||||||| |||||||||||    
T  47264044 gacatcgacatttgtaattacacagaattatgtgatttttacaaattattag 47263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 15724564 - 15724614
Alignment:
Q  27 taattacgctgaattatgtgatttt-ttcaaattattagttgtgtcggtgt 76  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||| ||||    
T  15724564 taattatgctgaattatatgatttttttcaaattattagttgtgtcagtgt 15724614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 4157496 - 4157455
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttt 52  Q
    ||||||||||||||||||||| | || |||||||||||||||    
T  4157496 ccgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 20521873 - 20521954
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||||||||||||| |||||||||||   || |||| |||| |||||||| || ||||| ||| ||| ||| ||||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgtccatgtacgtatccg 20521954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 33950194 - 33950081
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||| | | |||||  | |||||||||||||| ||||||||||||  | || |  |||| ||||| || ||| |||| ||| ||||||| |||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgttatgtctggtgtccgtgttcgt 33950095  T
Q  113 atccgtgcttcata 126  Q
    | ||||||||||||    
T  33950094 acccgtgcttcata 33950081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 40613504 - 40613443
Alignment:
Q  17 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||| | ||||||| ||||||||||||||||| ||||| ||||||  ||||||| ||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgt 40613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 22234890 - 22234966
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||| |  |||||| ||||||||||||| |||||||||||| ||||  ||||||| ||||  |||||||    
T  22234890 cgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccg 22234966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 22440615 - 22440651
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattatta 63  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  22440615 taattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 104)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 42359448 - 42359563
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||| | |||| |||||||| ||||||| |||| | |||||||    
T  42359448 ccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtcc 42359547  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  42359548 gtatccgtgcttcata 42359563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 1486709 - 1486824
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| | |||| ||| |||| || || |||||||||||||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccg 1486808  T
Q  112 tatccgtgcttcatat 127  Q
    ||||| ||||||||||    
T  1486809 tatccatgcttcatat 1486824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 47989556 - 47989443
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| |||| |||||| | || ||||| |||||||||||| |    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctg 47989458  T
Q  112 tatccgtgcttcata 126  Q
    ||||| |||||||||    
T  47989457 tatccatgcttcata 47989443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 22881615 - 22881724
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||      ||||||||| ||||||||     
T  22881615 ccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc------gtgtccggtgtccgtgtct 22881708  T
Q  111 gtatccgtgcttcata 126  Q
     |||||||||||||||    
T  22881709 atatccgtgcttcata 22881724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 398780 - 398879
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||| |||| |||||||| || ||||||||| |||| ||||||||||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcata 398879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 38078660 - 38078770
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||  |||| |||||     | ||||||||| |||||||||    
T  38078660 ccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccgtgtcc 38078754  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  38078755 gtatccgtgcttcata 38078770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 6612171 - 6612285
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||| |||| |||| | |||||| || ||||||||| | ||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccg 6612270  T
Q  112 tatccgtgcttcata 126  Q
    |||| ||||||||||    
T  6612271 tatctgtgcttcata 6612285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 1704992 - 1705067
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccg 1705067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 9103699 - 9103583
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||||||||||||| |||  || ||||||||||||||||||||||||||  |||||||| |||| |||||||||||  |||| ||| | |||||||    
T  9103699 ccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgttcgtgtcc 9103601  T
Q  111 gtatccgtgcttcatatg 128  Q
     |||||||||||||||||    
T  9103600 atatccgtgcttcatatg 9103583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 38503378 - 38503265
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||| | ||||||| ||||| ||| ||||||| ||||||||||||  ||||||||||||||||||||| ||  ||||| || |||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgt 38503279  T
Q  113 atccgtgcttcata 126  Q
    |||||||| |||||    
T  38503278 atccgtgcatcata 38503265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 24577186 - 24577245
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 24577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 31672894 - 31672969
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||||||    
T  31672894 ccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 40258934 - 40258997
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgt 40258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 41877469 - 41877584
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| || |||||||| ||||| ||||||||||||  ||||||| ||   |||||| | || ||||| ||||||| |||||    
T  41877469 ccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccatgtcc 41877568  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  41877569 gtatccgtgcttcata 41877584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 37598891 - 37598816
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||||    
T  37598891 ccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 46348382 - 46348458
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||||| || |||||| |||||||||||||||||||| |||||||| |||| ||||||||    
T  46348382 ccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 46348458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 113358 - 113292
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 1815315 - 1815241
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||| |||| ||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 1815241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 21378635 - 21378571
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgt 21378571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 22515886 - 22515946
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||    
T  22515886 ccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 2896144 - 2896235
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||||||||||||| ||||||||||||  ||||||| |||| |||||||| |||||||||| | |||||| | |||||||| |||||||    
T  2896144 ctgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgtgactgtatccgttcttcata 2896235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 5376500 - 5376587
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccgg 99  Q
    |||||||||||||| ||||||| ||||||||||| ||||| | ||||||||||  ||||||| ||||||||||||| || ||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgg 5376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 18337389 - 18337338
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatt 62  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18337389 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 34298480 - 34298381
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||||| ||||||||||||| |||||||||||| ||| |||| || ||||| ||| | |||||| ||||| ||| ||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgtacgtgtctgtatcggtgtttcata 34298381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 51410085 - 51410022
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcgg 73  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  51410085 ccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcgg 51410022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 28273089 - 28273147
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtc 28273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 31694710 - 31694824
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtga--ttttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||||| | |||||  || | ||||||   || ||||||||| ||||| ||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--tgtcgtgtccggtgtccgtatc 31694807  T
Q  110 cgtatccgtgcttcata 126  Q
    |||||||||||||||||    
T  31694808 cgtatccgtgcttcata 31694824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 87
Target Start/End: Original strand, 32434718 - 32434792
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggt-gtgttagtgtccg 87  Q
    |||| |||||||||||||||  |||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtggtgtcagtgtccg 32434792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 10577740 - 10577849
Alignment:
Q  17 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatcc 116  Q
    ||||||| | ||||||| ||| ||| ||||||||| | |||  ||||| |||||||| ||||  ||||||| || ||||||||| |||||||||||||||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatcc 10577839  T
Q  117 gtgcttcata 126  Q
    ||||||||||    
T  10577840 gtgcttcata 10577849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 18471355 - 18471243
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgatttttt--caaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgta 113  Q
    |||||||||||||||||  |||||||||||||||||||  ||||||||||| |||||||  | || | |||||| || || |||| ||||||||||| ||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgtatccgatatccgtgtccata 18471256  T
Q  114 tccgtgcttcata 126  Q
    || ||||||||||    
T  18471255 tctgtgcttcata 18471243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 40917808 - 40917714
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgt 108  Q
    ||||||||| |||||||||||| || ||||  ||||||||||||||||||||| |||||||| |||| ||| |||| || ||||||||| |||||||    
T  40917808 cgacaccgagacttgtaattacacttaatt--gtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgtgt 40917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 48450592 - 48450673
Alignment:
Q  17 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||||||||||||||| || |||||||| |||||||||||||||||| ||||| || |||| |||||||| || |||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 6332729 - 6332666
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtgat-ttttcaaattattagttgtgtccgtgt 6332666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 118
Target Start/End: Original strand, 10572591 - 10572695
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgta 113  Q
    |||||||||| | ||||||| | ||||||||||||||| ||||||||||||| ||||||| |||| ||||| |  || ||||||||| ||||| |||||     
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T
Q  114 tccgt 118  Q
    |||||    
T  10572691 tccgt 10572695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 18190109 - 18190214
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||||        ||||||| ||| |||| || ||||||||| ||| |||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattatta--------ggtgtgtcagtatccgtgtcgtgtccggtgtccatgtccgt 18190200  T
Q  113 atccgtgcttcata 126  Q
    |||| |||||||||    
T  18190201 atccatgcttcata 18190214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 13011223 - 13011330
Alignment:
Q  20 acacttgtaattacgctgaattatgtgatttt-ttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgt 118  Q
    |||||||||||||| || |||||||||||||| ||||||||||||| ||||||||  ||| ||||| || || |||| |||| |||||||| ||||| ||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgttcggtgtccgtgtctgtatctgt 13011322  T
Q  119 gcttcata 126  Q
     |||||||    
T  13011323 tcttcata 13011330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 16297295 - 16297398
Alignment:
Q  24 ttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttc 123  Q
    |||||||||| ||||||| ||||||||||||| |||||| | |||||||  |||| ||| ||||  | ||||||| | ||| ||||||||||||||||||    
T  16297295 ttgtaattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatccgtgcttc 16297394  T
Q  124 atat 127  Q
    ||||    
T  16297395 atat 16297398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 19058855 - 19058922
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||||||||||| ||||||||||| || |||| |||||||||| |||||||| ||||    
T  19058855 ccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgt 19058922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 31015097 - 31015002
Alignment:
Q  17 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| || | || |||| ||| || ||| ||||| || ||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgt 31015002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 7918211 - 7918325
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||| ||||| | ||||||| ||||||||||||||||| |||||||||||||  |||| | |||| | |||| | || ||||||||| ||| |||| |    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccatgtctg 7918310  T
Q  112 tatccgtgcttcata 126  Q
    || ||||||||||||    
T  7918311 taaccgtgcttcata 7918325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 5927339 - 5927440
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||| |||||||||||||||  | |||||| ||||||||||||||||||||  ||||  | |||| |||||||| || ||||||||| ||||| |||    
T  5927339 ccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 5927438  T
Q  111 gt 112  Q
    ||    
T  5927439 gt 5927440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 98
Target Start/End: Complemental strand, 5944342 - 5944254
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatt--ttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    |||||||||||||| ||||||| |||||||||||||||  ||||||||||||||| |||| ||| |||| |||||| | || |||||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccg 5944254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 32461465 - 32461529
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||| ||||||||||||||  | |||||||||||||||||||||||||||||||| ||| ||||    
T  32461465 acaccaacacttgtaattacattaaattatgtgattttttcaaattattagttgtgccggcgtgt 32461529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 36878519 - 36878447
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||||||| | ||||||| ||||||||||||||||| ||||||||||||  ||||||| |||| ||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 18556456 - 18556531
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||| | ||||||||||||  | ||||||||||| ||||||||||||||| |||||||| |||| ||||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccg 18556531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 30359441 - 30359374
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||||| | |||| || |||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  30359441 cgacacttgcagttacactaaattatgtgattttttcaaattatcagttgtgccggtgtgtcagtgtc 30359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 48040465 - 48040568
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgat-tttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtat 114  Q
    ||||||||||||| |||| || || |||||||  |||||||||||||||  |||||||| |||| |||||||| || ||||||||| ||||| ||| |||    
T  48040465 accgacacttgtatttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccatat 48040564  T
Q  115 ccgt 118  Q
    ||||    
T  48040565 ccgt 48040568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 1262919 - 1262849
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    |||||||||||||||| |||||||||||| |||||||| ||||  |||| || || |||||||||||||||    
T  1262919 tgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgt 1262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 1864882 - 1864944
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||||| | ||||||| ||||||||||||||||| |||||||||||  |||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgt 1864944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 9828103 - 9828037
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||| |  |||||| ||||||||||||||||| ||||||||||||| ||||||| ||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgt 9828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 3490396 - 3490498
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||||||||||||| |||||| ||||  |||| ||||||||||||  ||||||| |||| ||||||      ||||||||| || || ||||||||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgtc------gtgtccggtgtctgtatccgtatccg 3490489  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  3490490 tgcttcata 3490498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 6415002 - 6415110
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||| | ||||||  ||| ||||||||||||| |||||| |||||   |||||| |||| |||||||     ||||||||| | |||||||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtcc-----gtgtccggtgttcgtgtccgt 6415096  T
Q  113 atccgtgcttcata 126  Q
    ||||||||||||||    
T  6415097 atccgtgcttcata 6415110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 9709880 - 9709767
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||| | |||||||   ||||||||||||||| ||||||||||||  |||| ||  ||| |||||||| || ||||| | | ||| ||||     
T  9709880 ccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtccatgtct 9709781  T
Q  111 gtatccgtgcttca 124  Q
    ||||||||||||||    
T  9709780 gtatccgtgcttca 9709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 17778605 - 17778549
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    |||||||||||||||||||||| |||   |||||||||||||||||||||||| ||||||    
T  17778605 cgacaccgacacttgtaattacactg---tatgtgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 24334704 - 24334781
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatg-tgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||||| ||||||||||    ||||||||||| ||||| |||||||||||||  |||||||    
T  24334704 ccgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcggtgtgtccgtgtccg 24334781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 14359529 - 14359615
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    ||||||||||||||| || |||||||||| |||||||||||||||| |||||||| ||||  ||||| | || |||||| |||||||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtcc-gtatccgtg 14359615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 16812579 - 16812527
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||| ||||||||||| | |||||||||||| ||||||||    
T  16812579 ctgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccg 16812527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 20157350 - 20157438
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggt 100  Q
    |||||||||||| | | ||||| ||||||||||||||||| ||| ||||||||  |||||| ||||| |||| ||| || |||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggt 20157438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 23738735 - 23738675
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggt 74  Q
    ||||| |||| | ||||| | |||||||||||||||||||||||||||||| |||||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgtcggt 23738675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 35919276 - 35919356
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttt-----ttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||| ||||||| ||||||| |||||||||||||||||     ||||||||||||| |||||||| ||||| |||||||    
T  35919276 cgacacggacacttataattacactgaattatgtgattttttttcttcaaattattagatgtgtcggagtgttggtgtccg 35919356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 48548016 - 48548076
Alignment:
Q  66 tgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||||| |||| | ||||||  ||||||||||| |||||||||||||||||||||||||    
T  48548016 tgtgtcggcgtgtcattgtccgtattgtgtccggtgtccgtgtccgtatccgtgcttcata 48548076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 27471567 - 27471638
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    |||||| |||| ||||||||| |||||||||||| |||| ||||||||||||  || ||||||||| |||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgt 27471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 609482 - 609572
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||||||| ||||| ||||||||||||| ||||||| |||| |||||    || ||||||| | || |||||||||| |||||||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtgtccgtatacgtgcttcata 609572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 6427523 - 6427459
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttttt---caaattattagttgtgtcgg 73  Q
    |||||| |||||||||| ||||  ||||||||||||||||||   ||||||||||||||||||||    
T  6427523 cgacactgacacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtcgg 6427459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 9629900 - 9629966
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||| |||| || ||||||||| ||||||| ||||||||||||  |||||| |||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgt 9629966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 12443476 - 12443526
Alignment:
Q  28 aattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||| ||||||||||||||||| |||||||||||| |||||||| ||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgt 12443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 23622362 - 23622304
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||| |||| |||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  23622362 taattacactgagttatgtgatttttttaaactattagtggtgtcggcgtgttagtgtc 23622304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 35702587 - 35702649
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||| ||||||||||||||| || |||||| |||  ||||||||||||||| ||||||||    
T  35702587 ccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcgg 35702649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 23653040 - 23652991
Alignment:
Q  30 ttacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgtt 79  Q
    |||| ||||| |||||||||||||||||||||||| | ||||||||||||    
T  23653040 ttacactgaagtatgtgattttttcaaattattagctttgtcggtgtgtt 23652991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 25361945 - 25361884
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||| ||||| | ||||||| ||||||||||||||||| ||||||||| ||| |||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcgg 25361884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 29144365 - 29144471
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagt-tgtgtccggtatccgtgtccgtatccg 117  Q
    ||||||||||||||| ||| ||||| |  ||||||||||||||||| |||||||| || | |||||| | ||  |||||  ||||| ||||||||||||     
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagctgtgtcggcgtatcagtgtcagtgtccgtgtc--gtatctgtgtccgtatcca 29144462  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  29144463 tgcttcata 29144471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 40181931 - 40181878
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||| || | ||||||| ||||||||||||||||| ||||||||||||    
T  40181931 ccgacaccgatacatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattat 61  Q
    |||||||||||| | ||||||| ||||||||||||||||| |||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 2283725 - 2283669
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgt 68  Q
    ||||||| |||||| |||||||  ||||| |||||||||||||||||||| ||||||    
T  2283725 cgacaccaacacttataattacattgaatcatgtgattttttcaaattataagttgt 2283669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 5898267 - 5898327
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||||| | | ||||||| ||||||||||||||||||||| ||||||||  |||||||    
T  5898267 gacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcgg 5898327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 10233310 - 10233246
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||| ||||| | ||||||| ||||||||||||||||| |||| |||||||| |||| |||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttattagtggtgttggtgtgt 10233246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 17754352 - 17754304
Alignment:
Q  30 ttacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||| ||||||||||| ||||||||||||||||||  ||||||||||||    
T  17754352 ttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgt 17754304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 52903309 - 52903233
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||| | ||||||| ||||||||| ||||||| | |||||||||   || |||| |||||||||||||    
T  52903309 ccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccg 52903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 2288168 - 2288240
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||||||||| |  ||||||  |||||||||||||||| | ||||||||| |  ||||||||||||||||||    
T  2288168 ccgacaccgacacat--aattacattgaattatgtgattttcttaaattattattgttgtcggtgtgttagtgtc 2288240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 6427409 - 6427334
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||| |||| | |||||||  |||||||||||||||| ||||||||||||  |||| || |||| ||||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 6427334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 9449031 - 9449074
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||||||||||||||||| | |||| |||||||    
T  9449031 ctgaattatgtgattttttcaaattattaatggtgttggtgtgt 9449074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 13997940 - 13997869
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||||| | ||||||| ||||||||||||||||||| |||| ||||   ||||||| |||| ||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 14332641 - 14332700
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgt 70  Q
    |||||||||| || | ||||||| || |||||||||||||| ||||||||||||| ||||    
T  14332641 ccgacaccgagacatataattacactaaattatgtgattttctcaaattattagtggtgt 14332700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 110
Target Start/End: Complemental strand, 15323215 - 15323124
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||  |||||| || ||||||||||||||||||||||||||  ||| |||   ||| |||||||  || ||||||||| |||||||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtccgtgtcc 15323124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 21366043 - 21366134
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||||||| ||||||| |||||||||| |||| ||| ||||  |||| || || |||| |||| | | ||||||||| |||||||||||    
T  21366043 ctgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgttcatgtccgtatgcgtgcttcata 21366134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 25272541 - 25272494
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaatt 59  Q
    |||||||||||||| ||||||| || |||||||||||||| |||||||    
T  25272541 cgacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 28268192 - 28268239
Alignment:
Q  40 ttatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||| ||||||| ||||| |||||| ||||||||||||||    
T  28268192 ttatgtgattttctcaaatttttagtggtgtcgatgtgttagtgtccg 28268239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 34712383 - 34712458
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||| ||||| | ||||||| || |||||||| ||||| ||||||||||||  ||| |||||||||| ||||||    
T  34712383 cgacactgacacatataattacactaaattatgttattttctcaaattattagcagtgacggtgtgttaatgtccg 34712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 36906041 - 36905982
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    ||||||| ||||||||||||||||| ||| ||||||||  |||| ||||||| |||||||    
T  36906041 taattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagtgtcc 36905982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 40285677 - 40285768
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||||||| |||||| ||||||||||||  |||| ||||||| |||||||   | ||| | ||| ||| ||| |||||||||||||||||    
T  40285677 ctgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtccatctcgtgcctggtttccatgttcgtatccgtgcttcata 40285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 13436518 - 13436444
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||| |||| | ||||||| ||||||||||||||||  | ||||||||||  ||||||| ||||| |||||    
T  13436518 ccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtgttcgtgtc 13436444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 17831548 - 17831639
Alignment:
Q  29 attacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||| |||||| |||||||||| ||||||||||||  ||||||| |||| ||||||      || |||||| || ||||| ||||||||||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc------gtatccggtgtctgtgtctgtatccgtgcttcata 17831639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 21621015 - 21620973
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||    
T  21621015 ccgacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 9033022 - 9033083
Alignment:
Q  27 taattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||| ||||||||||||| |||||||||||||||||| |||| |  |||| ||||||||    
T  9033022 taattacactgaattatgtgatttttttcaaattattagtggtgttgacgtgtcagtgtccg 9033083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 16927200 - 16927237
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattag 16927237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 23622012 - 23621963
Alignment:
Q  30 ttacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgtt 79  Q
    |||| ||||| ||| | |||||||||||||||||| ||||||||||||||    
T  23622012 ttacactgaagtatataattttttcaaattattagctgtgtcggtgtgtt 23621963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 25934606 - 25934573
Alignment:
Q  93 tgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||||| |||||||||||||||||||||||||    
T  25934606 tgtccggtgtccgtgtccgtatccgtgcttcata 25934573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 28663667 - 28663626
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    ||||||||||||||||||||||   |||||||||||||||||    
T  28663667 cgacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 30173762 - 30173803
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    |||||||||||||||||||||| |||| |||||| |||||||    
T  30173762 cgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 11605943 - 11605987
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||| ||||||| | ||||||||| ||||||||||||||||||||    
T  11605943 acacatgtaatttcactgaattatatgattttttcaaattattag 11605987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 15449232 - 15449272
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttt 52  Q
    |||||| ||||||||||||||| || |||||||||||||||    
T  15449232 cgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 30749900 - 30749860
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatttt 51  Q
    ||||||||||||| | ||||||| |||||||||||||||||    
T  30749900 ccgacaccgacacatataattacactgaattatgtgatttt 30749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 30771351 - 30771311
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatttt 51  Q
    ||||||||||||| | ||||||| |||||||||||||||||    
T  30771351 ccgacaccgacacatataattacactgaattatgtgatttt 30771311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 34371772 - 34371728
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaa 56  Q
    |||||||||||| | ||||||| ||||||||||||||||| ||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 122
Target Start/End: Original strand, 13287399 - 13287509
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||  ||||||||||||| || ||||||||| ||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccg 13287498  T
Q  112 tatccgtgctt 122  Q
    |||||||||||    
T  13287499 tatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 21522809 - 21522695
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||||||| |||||||||| ||||||||||| ||||||| |||||||||| |||||||| |||| |||||||| || |||||||||  |||||||||    
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21522710  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  21522709 tatccgtgcttcata 21522695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 21533375 - 21533261
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||||||| |||||||||| ||||||||||| ||||||| |||||||||| |||||||| |||| |||||||| || |||||||||  |||||||||    
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21533276  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  21533275 tatccgtgcttcata 21533261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 21191055 - 21191158
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||| |||||||| || ||||||||| || ||||||    
T  21191055 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtcc 21191154  T
Q  111 gtat 114  Q
    ||||    
T  21191155 gtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 15382539 - 15382422
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatttttt--caaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgt 108  Q
    ||||||||||||||||||||||  ||||||||| |||||||||  ||||||||||| |||||||| |||| | |||||| || ||||||||| |||||||    
T  15382539 ccgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgt 15382440  T
Q  109 ccgtatccgtgcttcata 126  Q
    ||||||||||||||||||    
T  15382439 ccgtatccgtgcttcata 15382422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 19579760 - 19579646
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||| | || |||||||||||||| |||||||||||| |||||||| || | |||||||| ||||| |||||| || |||| ||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacg 19579661  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  19579660 tatccgtgcttcata 19579646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 6247682 - 6247588
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccg 105  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||| ||  | ||||||||| ||||    
T  6247682 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccg 6247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 17177025 - 17177137
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgta 113  Q
    ||||||||||||||||||||  |||||| | |||||||||||||||||||| ||||| || || | ||||||||||| || || ||| || |||||||||    
T  17177025 acaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgta 17177124  T
Q  114 tccgtgcttcata 126  Q
    |||||||||||||    
T  17177125 tccgtgcttcata 17177137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 6326304 - 6326411
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgt 118  Q
    ||||||||||||||| ||||||||||| ||||| |||||||| |||   |||||| |||| |||||||| || ||||||||||||||||||| ||||| |    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccat 6326403  T
Q  119 gcttcata 126  Q
    ||||||||    
T  6326404 gcttcata 6326411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 10298628 - 10298553
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  10298628 cgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 41995525 - 41995417
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtat 114  Q
    |||||||||||  ||||||  ||||||||||||||||||| |||||||||||||||||| |||| |||||| | || || ||| || |||||||||||||    
T  41995525 caccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtat 41995428  T
Q  115 ccgtgcttcat 125  Q
    |||||||||||    
T  41995427 ccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 21542089 - 21541984
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| ||||||||||| || |||| |||||||||||||||||||  ||| | |||| | || ||||| ||| ||||||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtctggtgtccgtgtccg 21541990  T
Q  112 tatccg 117  Q
    ||||||    
T  21541989 tatccg 21541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 42893418 - 42893353
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgt 42893353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 37328844 - 37328944
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| ||||||||| ||||||| |||||||||| ||||||||| | ||||||||||| | |||||||| || |||| |||| ||||||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtccgtgtccg 37328943  T
Q  112 t 112  Q
    |    
T  37328944 t 37328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 6770579 - 6770488
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||||||||||||| | ||||||||||||||||| |||||| |||||||| ||  ||| |||| ||||| |||||||||||||||||||    
T  6770579 ctgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcata 6770488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 33178085 - 33178018
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| ||||    
T  33178085 ccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 39698600 - 39698525
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| | |||| ||||||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccg 39698525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 14674323 - 14674253
Alignment:
Q  17 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| |||| ||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 14674253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 31084382 - 31084309
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| |||| ||||||    
T  31084382 cgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 21576744 - 21576803
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgt 70  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  21576744 ccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 24906300 - 24906415
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||| |||||||||||||||||| ||||||||||| |||||||||||||||||  ||||| || |||| ||||| || || |||||||||   ||||||     
T  24906300 ccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccggtgctcgtgtct 24906399  T
Q  111 gtatccgtgcttcata 126  Q
    ||||| ||| ||||||    
T  24906400 gtatcggtgtttcata 24906415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 4105310 - 4105221
Alignment:
Q  20 acacttgtaattacgctgaattatgtgat--tttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||| |||||| |||| ||| |||| ||  |||||||||||||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggtatccgtg 4105221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 7677764 - 7677702
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggt 74  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcggt 7677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 30183608 - 30183494
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||  | |||| ||||||| ||||||||||||||||||||||||  | | |||||| |  |||||||  || || |||||||    
T  30183608 cgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcggcatatcagtgtctgtattgtgtctagtgtctgtgtccg 30183509  T
Q  112 tatccgtgcttcata 126  Q
    ||||||| |||||||    
T  30183508 tatccgtccttcata 30183494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 8420087 - 8420011
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||||||||| | |||||| |||| | ||||||    
T  8420087 ccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtcattgtccg 8420011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 15405062 - 15405138
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtcc 97  Q
    |||||||||||||||  |||||||| |||||||||||||||||||||||||||   ||||||||||||| || ||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtc--agtgttagtgtccgtgtcgtgtcc 15405138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 6401557 - 6401443
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| ||| ||| ||||||||| | |||   ||||||||||||| ||||  ||||||| || | ||||||| |||||||| |    
T  6401557 cgacaccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtccgtgtctg 6401458  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  6401457 tatccgtgcttcata 6401443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 30135372 - 30135306
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||| ||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgt 30135306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 41633794 - 41633728
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||| |||||||||| ||||||||||| | |||||||||||||||| |||||||| ||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgt 41633728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 22013458 - 22013373
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||| || |||||||| |||||| ||||||||||| |||||||| |||| |||||||| || ||||||||| ||||| |||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgt 22013373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 36642763 - 36642875
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||||| || |||| || || ||||| | |||||||||||||||  |||||||| |||| |||||||| || ||||||||| | | |||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt-cttgtccgt 36642861  T
Q  113 atccgtgcttcata 126  Q
    |||| |||||||||    
T  36642862 atccatgcttcata 36642875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 15884048 - 15883985
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcgg 73  Q
    ||||||||||||||||||||||| ||||||||||||||| |||| |||||||| | ||||||||    
T  15884048 ccgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgtcgg 15883985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 25888293 - 25888409
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttc--aaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    |||||| || |||| ||||||| ||||||||| |||||||||   ||||||||||| |||| |||||||  || |||| || |||||| || ||||||||    
T  25888293 cgacacggagacttataattacactgaattatatgattttttttaaaattattagtagtgttggtgtgtctgtatccgtgtcgtgtcctgtgtccgtgtc 25888392  T
Q  110 cgtatccgtgcttcata 126  Q
     | ||||||||||||||    
T  25888393 tggatccgtgcttcata 25888409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 43001856 - 43001807
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||    
T  43001856 caccaacacttgtaattacactgaattatgtaattttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 5894833 - 5894897
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    ||||||||||||||||| |||   | |||||| ||||||||||||||||||||||||||| ||||    
T  5894833 cgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtccgtgt 5894897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 7218271 - 7218319
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattag 7218319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 14422962 - 14422889
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    |||||| ||| |||| ||||||| ||||||||||||||||||  |||||||||| ||| ||||||||| |||||||    
T  14422962 ccgacatcgaaacttataattacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtcc 14422889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 16203794 - 16203870
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||| | ||||||| || ||||||| |||||| ||||||||||||  |||||||  ||||||||||||    
T  16203794 ccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccg 16203870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 28588673 - 28588725
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    ||||||||||||| | ||||||| ||||||||||||||||| |||||||||||    
T  28588673 ccgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 40131680 - 40131624
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgt 68  Q
    ||||||||| | || ||||||  ||||||||||||||||||||||||||||||||||    
T  40131680 cgacaccgatatttataattaaactgaattatgtgattttttcaaattattagttgt 40131624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 3966562 - 3966488
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    |||||||||||| | ||||||| ||||||| ||||||||| ||||||||||||  |||||||  ||| |||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 19552569 - 19552631
Alignment:
Q  38 aattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggt 100  Q
    ||||||||||||||||||||||||||  |||||||| |||| |||||||| || |||| ||||    
T  19552569 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggt 19552631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 19820395 - 19820494
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||| |||||   || |||||||  ||||| ||||||||||||  ||||||| |||| |||||||| || ||||||||| ||||| |||    
T  19820395 ccgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 19820492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 34276836 - 34276802
Alignment:
Q  92 gtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||||||||||||||||||||||||||||||||    
T  34276836 gtgtccggtatccgtgtccgtatccgtgcttcata 34276802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 43564941 - 43564891
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattat 61  Q
    ||||||||||||||| ||||||| || ||||||||||||||| ||||||||    
T  43564941 ccgacaccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 18316952 - 18316989
Alignment:
Q  39 attatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18316952 attatgtgattttttaaaattattagttgtgtcggtgt 18316989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 30502387 - 30502440
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||||| | ||||||| |||||||| |||||||| ||||||||||||    
T  30502387 ccgacaccgacacatataattacactgaattaagtgattttctcaaattattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 30542730 - 30542783
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||||| | ||||||| |||||||| |||||||| ||||||||||||    
T  30542730 ccgacaccgacacatataattacactgaattaagtgattttctcaaattattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 6471889 - 6471941
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| |||| | ||||||| ||||||||||||||||| ||||||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 12160007 - 12159951
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    ||||||| ||||||||||  | ||||||||| |||||| ||||||||||||||||||    
T  12160007 accgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgtcg 12159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 17088337 - 17088277
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgatttttt-caaattattagttgtgtcggtgtgt 78  Q
    |||||||||||| || || |||||||||||||||| ||||||||||| |||||| ||||||    
T  17088337 gacacttgtaatcacactaaattatgtgatttttttcaaattattagatgtgtcagtgtgt 17088277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 31264491 - 31264431
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||| | ||||| ||||||||||| ||||| ||||||||||| |||||||| |||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaattattacttgtgtcgatgtgt 31264431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 41558707 - 41558779
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgt 108  Q
    |||||||||| ||||| ||||||||||| |||||||  ||||| |||||||| || || |||||| |||||||    
T  41558707 tgaattatgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgtatccggtgtccgtgt 41558779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 17123080 - 17122994
Alignment:
Q  39 attatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||||||||| ||||||||||||  |||| || |||| |||||||  ||| |||||| | ||||||||| |||| ||||||||||    
T  17123080 attatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgtgtcc-tatctgtgcttcata 17122994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 78
Target Start/End: Original strand, 22299492 - 22299546
Alignment:
Q  23 cttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||  |||||| |||||||||||| |||||||||| |||||||||||||    
T  22299492 cttgtaattatactgaatcatgtgatttttt-aaattattagctgtgtcggtgtgt 22299546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 23015995 - 23016105
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtg--tgttagtgtccgagttgtgtccggtatccgtgtccgtatc 115  Q
    |||||| | ||||||| ||||||||||||||||| |||||| ||||    |||| | |  |||  ||||||| || ||||||||  ||||||||||||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaatgattaacgatgtcagagagtgtcggtgtccgtgtcgtgtccggagtccgtgtccgtatc 23016094  T
Q  116 cgtgcttcata 126  Q
    |||||||||||    
T  23016095 cgtgcttcata 23016105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 22611761 - 22611803
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||||||||||||||||||  ||||||| ||||    
T  22611761 tgaattatgtgattttttcaaattattaggagtgtcggcgtgt 22611803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 24273045 - 24273103
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||| ||||||||||||||||| |||||||| ||  |||||| |||| ||||||||    
T  24273045 taattacactgaattatgtgattttctcaaattaataactgtgtcagtgtcttagtgtc 24273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 24389169 - 24389111
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||| ||||||||||||||||| |||||||| ||  |||||| |||| ||||||||    
T  24389169 taattacactgaattatgtgattttctcaaattaataactgtgtcagtgtcttagtgtc 24389111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 27932295 - 27932233
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||||| | | |||||||||| ||||||||||| ||||| ||||||||||||  |||||||    
T  27932295 ccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgtcgg 27932233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 38464371 - 38464425
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||| ||||| |  ||||| |||||||||| |||||||||||||||||||||    
T  38464371 gacacttataatttcaatgaataatgtgattttctcaaattattagttgtgtcgg 38464425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 2436981 - 2436908
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||||||| | |||| ||   |||||||||||||||| |||||||||||  ||||||| |||| ||||||    
T  2436981 cgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 3751958 - 3752049
Alignment:
Q  40 ttatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatcc------gtgtccgtatccgtgcttcata 126  Q
    |||||||||||| |||||||||||| |||||||   ||||||||| || || |||||||||||||      |||||||| |||||||||||||    
T  3751958 ttatgtgattttctcaaattattag-tgtgtcgacttgttagtgttcgtgtcgtgtccggtatccatgtttgtgtccgtttccgtgcttcata 3752049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 5467984 - 5468029
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||| | ||||||| ||||||||||||||||| |||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 12199989 - 12199948
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  12199989 cgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 2548447 - 2548395
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    ||||||||||||||| | ||||| ||||||||||| ||||| || ||||||||    
T  2548447 ccgacaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 20683370 - 20683330
Alignment:
Q  82 tgtccgagttgtgtccggtatccgtgtccgtatccgtgctt 122  Q
    |||||| || ||||||||| |||||||||||||||||||||    
T  20683370 tgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgctt 20683330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 78
Target Start/End: Complemental strand, 26609382 - 26609346
Alignment:
Q  42 atgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  26609382 atgtgattttatcaaattattagtggtgtcggtgtgt 26609346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 36838602 - 36838550
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||| | ||||||| || |||||||| ||||| ||||||||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattattag 36838550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 40000558 - 40000586
Alignment:
Q  35 ctgaattatgtgattttttcaaattatta 63  Q
    |||||||||||||||||||||||||||||    
T  40000558 ctgaattatgtgattttttcaaattatta 40000586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 41091257 - 41091309
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||| |||||| | ||||||| ||||||||||||||||| |||||| |||||    
T  41091257 cgacatcgacacatataattacactgaattatgtgattttctcaaatcattag 41091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 42463496 - 42463536
Alignment:
Q  67 gtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||||||||| || ||||||||| |||||||||    
T  42463496 gtgtcggtgtgttagtgttcgtgttgtgtccagtatccgtg 42463536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 11061077 - 11061189
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||||||| |||||||| || || |||| | |||||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgt 11061176  T
Q  113 atccgtgcttcat 125  Q
    |||||||||||||    
T  11061177 atccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 25481962 - 25481847
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| | |||||  |||||||||| | ||||||||     
T  25481962 ccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtct 25481863  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  25481862 gtatccgtgcttcata 25481847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 24339701 - 24339596
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| | |||||  || ||||||||| ||||| ||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccg 24339602  T
Q  112 tatccg 117  Q
    ||||||    
T  24339601 tatccg 24339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 27945100 - 27945000
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||| || ||||||||| ||||| ||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccg 27945001  T
Q  112 t 112  Q
    |    
T  27945000 t 27945000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 5409836 - 5409950
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| || | |||| |||||||  || || |||||| || ||||| |    
T  5409836 cgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctg 5409935  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  5409936 tatccgtgcttcata 5409950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 3991383 - 3991318
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtg 77  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcggtgtg 3991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 9408334 - 9408407
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 9778559 - 9778453
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||| || ||||||        |||||||| || ||||||||| ||||||||||    
T  9778559 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtc--------agtgtccgtgtcgtgtccggtgtccgtgtccg 9778468  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  9778467 tatccgtgcttcata 9778453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 13770750 - 13770636
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||| |||||||||||||||| ||||||||||| ||||||| |||||||||| |||||||| || | |||||||| || ||||||| | |||| ||||     
T  13770750 cgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtccgagtcca 13770651  T
Q  112 tatccgtgcttcata 126  Q
    |||||||| ||||||    
T  13770650 tatccgtgtttcata 13770636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 35862023 - 35861898
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg------tgtgttagtgtccgagttgtgtccggtatccg 105  Q
    |||||| |||||||  ||||||  ||||||||||||||||||||||||||||||||||||||       ||||||||||| | || ||||||||| ||||    
T  35862023 cgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttagtgtctgtgtcgtgtccggtgtccg 35861924  T
Q  106 tgtccgtatccgtgcttcatatgtga 131  Q
     |||||||||||||||||||| ||||    
T  35861923 cgtccgtatccgtgcttcataagtga 35861898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 8234206 - 8234139
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  8234206 ccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgtgt 8234139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 18215186 - 18215261
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||| || ||||| |||||||||||||    
T  18215186 cgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccg 18215261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 24105739 - 24105638
Alignment:
Q  10 cccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    |||||| ||||||||||||||||| |||||| |||  |||||||||||||||||| |||||||| |||| |||||||| || |||||| |||||||| ||    
T  24105739 cccgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtatccgtatc 24105641  T
Q  110 cgt 112  Q
    |||    
T  24105640 cgt 24105638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 32094020 - 32094093
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| ||  |||||||||    
T  32094020 cgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgt 32094093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 43027469 - 43027554
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtcc 97  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||||| || ||||  |||| |||||||| || ||||||    
T  43027469 cgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtcc 43027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 7438764 - 7438704
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcgg 7438704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 11272586 - 11272649
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattat--gtgattttttcaaattattagttgtgtcgg 73  Q
    |||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcgg 11272649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 21880212 - 21880099
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||   ||||    ||||||||| || ||  |||||||| ||||||||     
T  21880212 ccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtccacatgttagtgttcgtgt--tgtccggtgtccgtgtct 21880115  T
Q  111 gtatccgtgcttcata 126  Q
    |||| |||||||||||    
T  21880114 gtatgcgtgcttcata 21880099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 26033465 - 26033513
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 10042996 - 10042921
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||| ||||||| |||||||||| |||||||||| ||| ||||||||||||| ||||||| |||| ||||||||    
T  10042996 cgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccg 10042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 21826333 - 21826218
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||| | | ||||  |||| |||||||||||||| ||||||||||| ||||||| |||||||||||   || ||||| ||| ||| |||||    
T  21826333 ccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtctggtgtccatgtcc 21826234  T
Q  111 gtatccgtgcttcata 126  Q
    || | |||||||||||    
T  21826233 gtcttcgtgcttcata 21826218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 26733364 - 26733253
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||| | ||||||  ||||||||||||||||| ||||||||||||  ||||||  |||| |||||||| || ||||| ||| || || |||    
T  26733364 ccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcggtatcc 26733265  T
Q  111 gtatccgtgctt 122  Q
    || |||||||||    
T  26733264 gtttccgtgctt 26733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 1433513 - 1433399
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| |  ||| |||||||||| |||||||||||   ||||||| |||| | |||||| || |||| |||| |||||| |||    
T  1433513 cgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccg 1433414  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  1433413 tatccgtgcttcata 1433399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 11665441 - 11665499
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    |||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtc 11665499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 18039058 - 18038945
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaa---attattagttgtgtcggtgtgttagtgtccgagttgtgtccggtat-ccgt 106  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||   |||||||||||||||||  ||| ||||||      |||||| || | ||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattattagttgtgtcggaatgtcagtgtc------gtgtcccgtgtcccgt 18038965  T
Q  107 gtccgtatccgtgcttcata 126  Q
    ||||||||||||||||||||    
T  18038964 gtccgtatccgtgcttcata 18038945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 19206108 - 19206014
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    ||||||||||| | ||||||   |||||||||||||||| ||||||||||||  ||||||| ||||| ||||||| || ||||| ||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtg 19206014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 25822714 - 25822648
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||||||||||| ||||||| ||   |||||||||||||||||||||||||| ||||    
T  25822714 cgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgt 25822648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 1885632 - 1885519
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||| |||||  |||||||||| ||||||||||| | |||   |||||| |||||  || || | || ||||||||| |||||||| |    
T  1885632 cgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgtccgtatcagtgtcgtgtccggtgtccgtgtctg 1885533  T
Q  112 tatccgtgcttcat 125  Q
    ||||||||||||||    
T  1885532 tatccgtgcttcat 1885519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 20549851 - 20549778
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    ||||||||||||| | ||||||| |||||||| |||||||| ||||||||||||  |||||||||||| |||||    
T  20549851 ccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 21140982 - 21141095
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||| ||||||| | |||| || ||||||||| ||||||| | ||||||||||| ||||||  ||||  | ||||| || |||| |||| ||||||||||    
T  21140982 cgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccg 21141081  T
Q  112 tatccgtgcttcat 125  Q
    ||||||||||||||    
T  21141082 tatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 29763187 - 29763288
Alignment:
Q  25 tgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttca 124  Q
    ||||| ||| || |||||||||||||||||||||||| |||||||| ||||||| ||||||   || |||| |||| || |||| ||||||||| |||||    
T  29763187 tgtaactacacttaattatgtgattttttcaaattataagttgtgttggtgtgtcagtgtctatgtcgtgttcggtgtctgtgttcgtatccgtacttca 29763286  T
Q  125 ta 126  Q
    ||    
T  29763287 ta 29763288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 7058485 - 7058429
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgt 68  Q
    ||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  7058485 cgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttgt 7058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 11722121 - 11722193
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    ||||||||||||||||| ||||||| ||||  ||||||| |||| |||||||| || ||||||||||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 11722193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 11831481 - 11831425
Alignment:
Q  22 acttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||| || |||||| |||||||||||||||||||||||||||| |||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtgt 11831425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 17851488 - 17851376
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgta 113  Q
    |||| ||||| | ||||||| ||||||||||||||||| | ||||||||||  || ||| |||||  || |||  || ||||||||| |||||||| |||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgta 17851389  T
Q  114 tccgtgcttcata 126  Q
    |||||||||||||    
T  17851388 tccgtgcttcata 17851376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 28155630 - 28155562
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgtt 79  Q
    ||||||||||||||||||||||| | ||||||||| ||||| ||||||||||||  ||||||| |||||    
T  28155630 ccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgtt 28155562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 7197296 - 7197363
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||||||||||||  |||||||  ||||||||| |||||||||| |||||||| ||||    
T  7197296 ccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgt 7197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 13557750 - 13557847
Alignment:
Q  21 cacttgtaattacgctgaattatgtga---ttttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatc 115  Q
    ||||||||||||| |||||||||||||   |||||| |||||||||||| |||||| |||| |||||| | ||  |||||||| |||||||| |||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtccggtgtccgtgtctgtatc 13557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 15680869 - 15680794
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    ||||||||||||||| ||||||| || ||||||||||||||||  ||||||||| | |||||| |||| |||||||    
T  15680869 ccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtcc 15680794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 19992060 - 19992001
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| ||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 22868086 - 22868015
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||||| ||||||||||||||||| ||| ||||||||| ||||||| |||| |||||| | ||||||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtccg 22868015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 29787384 - 29787455
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||||| ||||||||||||||||| ||||||||||||  ||||||| |||||| |||||| ||||| ||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgttgtatccg 29787455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 33994270 - 33994199
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    ||||||||||||||||||| | |||||||||||||  ||||||||||| |||||| ||||| |||| |||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgt 33994199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 40287356 - 40287422
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||| |||||||||||||||||| |||||| || |||||||||||||||||| |||||||||| ||||    
T  40287356 ccgataccgacacttgtaattacactgaat-atatgattttttcaaattattcgttgtgtcggcgtgt 40287422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 13300468 - 13300410
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    |||||||| ||| |||||||| ||||||||| |||||||||||||||||||||| ||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgtc 13300410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 21560562 - 21560484
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttt-----ttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||||||||||||||||| |||||||||||||||||     ||||||||||||| ||| |||| |||| ||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtgtcagtgtc 21560484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 21864868 - 21864779
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatttttt--caaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    |||||| |||||||||||||||| || |||||| |||||||||  ||||||||||| |||||| ||||||  ||||||| || |||||||    
T  21864868 ccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccg 21864779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 18213032 - 18213153
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaatta-ttagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    ||||||||||||| | ||||||| || |||||||||||||| | |||  | ||||||||||||| || | |||||||| || ||||| ||| | |||||     
T  18213032 ccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttcgtgtt 18213131  T
Q  110 cgtatccgtgcttcatatgtga 131  Q
    |||||| |||||||||| ||||    
T  18213132 cgtatctgtgcttcataggtga 18213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 19213863 - 19213810
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||||||||| |||| ||| ||||||||||||||| ||||||||||    
T  19213863 ccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattag 19213810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 9482994 - 9482918
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||| | ||||||| ||||||| ||||||||| ||||||||| ||   ||||||||||| ||||||||    
T  9482994 ccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccg 9482918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 2334309 - 2334256
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatt--ttttcaaattatta 63  Q
    |||||||||||||||||||||| || ||||||||||||  ||||||||||||||    
T  2334309 cgacaccgacacttgtaattacactaaattatgtgattttttttcaaattatta 2334256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 22602710 - 22602824
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| ||||||||||||||||| |||||| |||    ||||||| |||| |||| | | || ||||  |||  |||||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcccgtgtccg 22602809  T
Q  112 tatccgtgcttcata 126  Q
    ||||||| |||||||    
T  22602810 tatccgtccttcata 22602824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 26329382 - 26329496
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||| ||||||| | ||||||| ||||||| |||| |||| |||||||||||    |||||| |||| |||||| | || |||||| || |||||||| |    
T  26329382 cgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgtgtctg 26329481  T
Q  112 tatccgtgcttcata 126  Q
    ||| |||||||||||    
T  26329482 tattcgtgcttcata 26329496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 30731080 - 30730982
Alignment:
Q  28 aattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||| ||||||||||||||||| |||||||||| |  ||||||| |||  | |||  | || ||||| ||| |||||||||||||| ||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttcata 30730982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 32308163 - 32308105
Alignment:
Q  28 aattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    |||||| ||||||||||||||||| ||||||||||||  ||||||| |||| |||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 6630912 - 6630985
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||| |||||| | ||||||| |||||||| |||| ||| ||||||||||||| ||||||| |||| ||||||    
T  6630912 cgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 43250046 - 43249957
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||| ||||||| ||| ||||||| ||||| |||||||||||   ||||||| |||| |||||||| ||  |||||||| ||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgtg 43249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 5835305 - 5835245
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||||||| | ||||||| ||||||||||| ||||| ||||| ||||||| |||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcgg 5835245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 15902879 - 15902795
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    |||||||||| | ||||||| || |||||||||||||| ||||||||||| | |||||||  ||| |||||| | || |||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaa 57  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 1401083 - 1401032
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||| |||| ||||||| ||||||||||||| ||| ||||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaattattag 1401032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 11890919 - 11890970
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    ||||||| |||||  ||||||| ||||||||| |||||||||||||||||||    
T  11890919 cgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 18013074 - 18013133
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    |||||| ||||| | ||||||| ||||||||||| ||||||| ||||||||||| |||||    
T  18013074 cgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtc 18013133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 1656720 - 1656629
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||||||| |||   ||||||||||||        ||||||| || ||||||| ||||||||||| ||||||| |||||||    
T  1656720 taattacactgaattatgtgattttttaaaaaatttagttgtgtcg--------gtgtccgtgtcgtgtccgatatccgtgtccatatccgtacttcata 1656629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 4024060 - 4024022
Alignment:
Q  38 aattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||| ||||||| ||||||||||||||||||||||    
T  4024060 aattatgtcatttttttaaattattagttgtgtcggtgt 4024022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 23191942 - 23191880
Alignment:
Q  25 tgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||| ||||| ||||||||||| ||||||||||||  ||||||| || | ||||||||    
T  23191942 tgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccg 23191880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 41020553 - 41020495
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    |||||||| | | ||||||| || |||||||||||||||  ||||||||||||||||||    
T  41020553 acaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcg 41020495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 2424658 - 2424621
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattag 2424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 3721153 - 3721100
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||||| | ||||||  || |||||||||||||| ||||||||||||    
T  3721153 ccgacaccgacacatataattatactaaattatgtgattttctcaaattattag 3721100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 49107879 - 49107795
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtcc 97  Q
    |||||||||||| | |||| || || ||||||||| |||| ||||||||||||  |||||||||||| || ||||| || ||||||    
T  49107879 cgacaccgacacatataatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 598266 - 598170
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    |||||||||||||  ||||||  | ||||| |||||||| | ||||||||||  |||||| ||||| |||||||| ||  |||| ||| ||||||||    
T  598266 gacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgtgtc 598170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 7328691 - 7328743
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||| | ||||||| || |||||||| ||||| ||||||||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattag 7328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 18035866 - 18035902
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattt 50  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  18035866 acactgacacatgtaattacgctgaattatgtgattt 18035902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 23746945 - 23746905
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||||||||||| ||||||||| ||||||||| ||||    
T  23746945 tgaattatgtgattttctcaaattataagttgtgtcagtgt 23746905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 30813863 - 30813819
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  30813863 acacctgtaattacactgaattatgtaattttctcaaattattag 30813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 10335284 - 10335400
Alignment:
Q  10 cccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    ||||||||||||||||||| |||| || || ||||||| ||||||||||||||||||||||||| |||| |||||||| || ||||||||| |||||||     
T  10335284 cccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtt 10335383  T
Q  110 cgtatccgtgcttcata 126  Q
    |||||||||||||||||    
T  10335384 cgtatccgtgcttcata 10335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 16000015 - 16000130
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||||||||||||| |||| ||||||||||| ||||||| ||||||||||||||||||| |||| |||||| | || |||| |||| |||||||||    
T  16000015 ccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtcc 16000114  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  16000115 gtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 15796294 - 15796408
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||||||| |||||||||| ||||||||| |||||||||||||||||||  |||||||| |||| | |||||| || ||||||||| |||||||||     
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtcca 15796393  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  15796394 tatccgtgcttcata 15796408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 750618 - 750733
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt-tagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||||||||||||||| |   |||||||||||| |||||||||||||||||||||||  ||||  |||||||| || ||||||||| |||||||||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgtgtcc 750717  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  750718 gtatccgtgcttcata 750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 21479178 - 21479069
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||||||||| |||||||| |||| ||||||      ||||||||| |||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc------gtgtccggtgtccgtgtcc 21479085  T
Q  111 gtatccgtgcttcata 126  Q
    |||||| |||||||||    
T  21479084 gtatccatgcttcata 21479069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 28918060 - 28917965
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||| ||| |||| || ||||||||| ||||||    
T  28918060 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgtg 28917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 55401135 - 55401040
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| || | |||||||| || || |||||| |||||    
T  55401135 ccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgt 55401040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 10955012 - 10954939
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  10955012 ccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 35994744 - 35994851
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||  ||| | |||||  || ||||||||| ||| ||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccg 35994842  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  35994843 tgcttcata 35994851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 8587020 - 8587115
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||| ||| |||||||| |||| |||||||| ||  |||||||| |||||    
T  8587020 ccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgt 8587115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 3164033 - 3164139
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtg 119  Q
    ||||||||  |||| |||||||||||||||||||||||||||||| |||||||  |||  | |||||| || ||||||||| |||||||| |||||||||    
T  3164033 acacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtg 3164132  T
Q  120 cttcata 126  Q
    |||||||    
T  3164133 cttcata 3164139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 34910376 - 34910310
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 34910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 20503522 - 20503451
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| |||| ||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 41961650 - 41961745
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||||||||||||| | |||| ||||||| |||||||||||||||||||| ||| |||| |||||| | || ||||||||| ||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtccgtg 41961745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 4990967 - 4991081
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||| ||||||||||||||||| ||||||||||| ||||| ||||| ||||||  ||||||| |||| ||| |||| || |||| |||| ||||||||||    
T  4990967 cgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgtccg 4991066  T
Q  112 tatccgtgcttcata 126  Q
    ||| |||| ||||||    
T  4991067 tatacgtgtttcata 4991081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 14209172 - 14209106
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 28812574 - 28812508
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgt 28812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 4987294 - 4987363
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||    
T  4987294 caccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 8383317 - 8383216
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||| ||||||| ||||||||| ||||||| ||||||||||||  ||||||| |||| | |||||| || |||||| || |||||||||    
T  8383317 ccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtcc 8383218  T
Q  111 gt 112  Q
    ||    
T  8383217 gt 8383216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 10268487 - 10268600
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||||||  |||||||| |||| |||||||  || ||   || | ||||||| |||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgtgttcgt 10268586  T
Q  113 atccgtgcttcata 126  Q
    ||||||||||||||    
T  10268587 atccgtgcttcata 10268600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 51206352 - 51206417
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||| ||||    
T  51206352 ccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtcagtgt 51206417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 1509598 - 1509534
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||| ||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 1509534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 14747621 - 14747512
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttttt-caaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||| ||| ||||||||||| || |||||||||||||||| ||||||||||| |||||||| |||| ||||||      ||||||||| ||||| |||    
T  14747621 cgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc------gtgtccggtgtccgtatcc 14747528  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  14747527 gtatccgtgcttcata 14747512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 24205047 - 24205155
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||||| ||||||| ||| ||||||| ||||| |||||||||||   ||||||| |||| |||||||| || ||||||||| |||||||| || ||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 24205146  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  24205147 tgcttcata 24205155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 26508166 - 26508110
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 26508110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 7171561 - 7171447
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||| |||||||||||||| | ||||||| |||||||| |||||||  || ||||||||  ||| ||| |||| || ||||||||| || ||||||    
T  7171561 ccgacaccaacacttgtaattacaccgaattatatgattttt-caaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgtgtcc 7171463  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  7171462 gtatccgtgcttcata 7171447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 26492204 - 26492291
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||||||| | |||||| |||| |||||||| || |||||||    
T  26492204 ccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 7928510 - 7928445
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  7928510 ccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgt 7928445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 14829748 - 14829676
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||| |||| ||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgat-ttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 49651786 - 49651847
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcgg 49651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 14216951 - 14216867
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtc 96  Q
    |||||| ||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||  |||| |||||||| || |||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 14223080 - 14222996
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtc 96  Q
    |||||| ||||||||||||||| ||||||||| |||| |||| ||||||||||||||||||  |||| |||||||| || |||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 25775569 - 25775493
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||| || |||| |||||||    
T  25775569 ccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 34307786 - 34307894
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||||| ||||||| ||||| ||||||||||| ||||||||||||  ||||| | ||||| ||||| | ||  |||||||| | |||||||||||||     
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatcca 34307885  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  34307886 tgcttcata 34307894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 21256990 - 21257045
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 25093562 - 25093447
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||| | ||||||| ||||||| ||||||||| |||||| ||||   ||||||| ||||||||||| | || ||||||||| || ||||      
T  25093562 ccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgtgttt 25093463  T
Q  111 gtatccgtgcttcata 126  Q
    |||||||| |||||||    
T  25093462 gtatccgtacttcata 25093447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 11666003 - 11665889
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| || |||| ||||||||| ||||||||||||   |||||||||||||||||  | || ||||||||| || || |||     
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtctgtatcca 11665904  T
Q  112 tatccgtgcttcata 126  Q
    ||| |||||||||||    
T  11665903 tattcgtgcttcata 11665889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 34185123 - 34185189
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||  ||||||| ||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 27505305 - 27505244
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||||||||||||||||||| || |||||||||||||||  |||||||||| ||||||||    
T  27505305 cgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcgg 27505244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 17005621 - 17005693
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    |||||||||||| ||||||| ||||||||| ||||||| ||||||||||||| |||| |||| || |||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattagtggtgttggtgagtcagtgtcc 17005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 25948887 - 25948939
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 10318033 - 10318154
Alignment:
Q  10 cccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgtta------gtgtccgagttgtgtccggtatc 103  Q
    |||||||||||||||| || |||| || ||  |||||| |||||||||||||||| |||||||| |||| |      ||||||| || ||||||||| ||    
T  10318033 cccgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtgtcgtgtccggtgtc 10318131  T
Q  104 cgtgtccgtatccgtgcttcata 126  Q
    ||||| |||||||||||||||||    
T  10318132 cgtgttcgtatccgtgcttcata 10318154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 39756295 - 39756187
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||   | |||||||||||||||| ||||||||| || |||||| |||| ||||||      ||||||| | ||||| |||     
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc------gtgtccgatgtccgtatcca 39756202  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  39756201 tatccgtgcttcata 39756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 14832158 - 14832092
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||| |||||||||||||||  ||| ||||||||||||||||||||||||| ||| |||| ||||    
T  14832158 cgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgt 14832092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 8593197 - 8593136
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatttttt-caaattattagttgtgtc 71  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||| ||||||    
T  8593197 ccgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtc 8593136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 14979224 - 14979179
Alignment:
Q  28 aattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcgg 14979179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 40052367 - 40052318
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 2620079 - 2620139
Alignment:
Q  38 aattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    |||||||||||||| |||||| |||||| ||||||| |||| ||||||||||| |||||||    
T  2620079 aattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 18427009 - 18426933
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||  | ||||||| | ||||||||||||||||| ||||||||||| ||||||| ||||  |||||||    
T  18427009 ccgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccg 18426933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 29508497 - 29508437
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||| | ||||||| ||||||||| ||||||||||||||||||||| || |||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattattagtggtatcggtgtgt 29508437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 38731279 - 38731163
Alignment:
Q  10 cccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    |||||||||||||| | ||| ||| ||||||||||||||||||| ||||||||||  || |||   |||  |||| |  || ||||||| | ||||||||    
T  38731279 cccgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgtacatgtcgtgtccgttgtccgtgtc 38731180  T
Q  110 cgtatccgtgcttcata 126  Q
    || ||||||||||||||    
T  38731179 cgcatccgtgcttcata 38731163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 8789549 - 8789616
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||| | ||||||| | ||||||||||||||| ||||||||| ||  ||||||||||||    
T  8789549 ccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgt 8789616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 55213020 - 55212961
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||||||||||||||| | || |||||||||||||||| |||||||||  ||||||||    
T  55213020 acaccgacacttgtaattgcactaaattatgtgattttttaaaattattaactgtgtcgg 55212961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 3610691 - 3610578
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    |||| ||||||| |||||||| |||| |||||| ||||||| |||||||||  ||||| || |||| |||||| | || ||||||||| | ||||   ||    
T  3610691 gacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccggtgttcgtggatgt 3610592  T
Q  113 atccgtgcttcata 126  Q
    || |||||||||||    
T  3610591 attcgtgcttcata 3610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 9800099 - 9800014
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtcc 97  Q
    ||||||||||||||  |||||| | ||||||||| ||||| ||||||||||||  ||||||| |||| ||||| || || ||||||    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 11610573 - 11610528
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattag 11610528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 14028005 - 14027960
Alignment:
Q  81 gtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||    
T  14028005 gtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 14027960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 17568749 - 17568786
Alignment:
Q  91 tgtgtccggtatccgtgtccgtatccgtgcttcatatg 128  Q
    |||||||||| |||||||||||||||||||||||||||    
T  17568749 tgtgtccggtgtccgtgtccgtatccgtgcttcatatg 17568786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 8412968 - 8413020
Alignment:
Q  35 ctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||| |||| |||||||||||||||||||||| ||| | ||||||    
T  8412968 ctgaattatgtgtttttctcaaattattagttgtgtcggtctgtcaatgtccg 8413020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 15314876 - 15314944
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgtta 80  Q
    ||||||| |||| | ||||||| || ||||||||||||||||||||||| || ||||||| || |||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtcagtttgtta 15314944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 12704051 - 12704000
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||| |||||||||||| |||| ||||||||||||| ||||||| ||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgt 12704000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 22774071 - 22774130
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    ||||||||||||| ||||||| ||||| ||||||| ||| || |||||||||| ||||||    
T  22774071 gacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcg 22774130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 35222998 - 35222931
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||| | |||||||  |||||||||||||||| | ||| | ||||||||||||| ||||    
T  35222998 ccgacaccgacacatataattacattgaattatgtgattttctaaaaatgttagttgtgtcggcgtgt 35222931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 3865732 - 3865690
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttca 55  Q
    ||||||||||||||||||||  ||||||||||||| |||||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagtttttca 3865690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 32400707 - 32400780
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||| |||||||||||||||    |||||||| || ||||||||||||||| |||||||  |||| ||||||||    
T  32400707 ccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccg 32400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 33359821 - 33359747
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||||| |||||||||| |||| || || |||||||  ||||||||||||||| |||||| | |||| ||||||    
T  33359821 ccgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtc 33359747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 40993334 - 40993376
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    ||||||||||||| | ||||||| |||||||||||||||||||    
T  40993334 ccgacaccgacacatataattacactgaattatgtgatttttt 40993376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 3865586 - 3865631
Alignment:
Q  42 atgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||| ||||||||||||||||| |||||||| |||| ||||||||    
T  3865586 atgtggttttttcaaattattagctgtgtcggcgtgtcagtgtccg 3865631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 11252022 - 11251985
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  11252022 taattacactgaattatgtgattttctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 11313815 - 11313864
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    ||||||| || |||||||||||||| ||||||||||||  ||||||||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagcagtgtcggtgt 11313864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 11493376 - 11493421
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    ||||||| ||||||||||||||||| ||| ||||||||| ||||||    
T  11493376 taattacactgaattatgtgattttctcacattattagtggtgtcg 11493421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 25064953 - 25064880
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggt 100  Q
    ||||||| || ||||||||||||||||||||| |||||  ||||||| |||| | |||| | || |||||||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggt 25064880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 32429381 - 32429474
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    |||||||| | || ||||| | ||||||||||||||||| | ||||||||||   |||||| |||| | ||| || |||||||||||| |||||    
T  32429381 gacaccgatatttataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgt 32429474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 49505153 - 49505206
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| ||||| | ||||||| || |||||||||||||| ||||||||||||    
T  49505153 ccgacactgacacatataattacactaaattatgtgattttctcaaattattag 49505206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 1550199 - 1550147
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||| ||||| | ||||||| ||||||  ||||||||||||||||||||||    
T  1550199 cgacactgacacctataattacactgaatagtgtgattttttcaaattattag 1550147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 4201440 - 4201404
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattatta 63  Q
    ||||||| || ||||||||||||||||||||||||||    
T  4201440 taattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 7614415 - 7614479
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||||||  | ||||||  ||||||||||||||||| | |||||||||  |||||||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcggtgt 7614479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 8039835 - 8039887
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||| | ||||||| ||||||||| | ||||| ||||||||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattag 8039887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 16192765 - 16192857
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtg 119  Q
    ||||||| ||||||||||| ||||| |||||||||||   ||||||||||||  |  || ||||  |||||| | ||| ||||||||||||||    
T  16192765 taattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtcggcatctgagtcatgtccgatgtccttgtccgtatccgtg 16192857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 85
Target Start/End: Complemental strand, 21305279 - 21305231
Alignment:
Q  38 aattatgtgatttttt-caaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||||||||||| |||||||||||  ||||||| |||||||||||    
T  21305279 aattatgtgatttttttcaaattattagaggtgtcggcgtgttagtgtc 21305231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 24633800 - 24633764
Alignment:
Q  37 gaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  24633800 gaattatgtgattttctcaaattattagtggtgtcgg 24633764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 8858 - 8743
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| || ||| || |||||||||||||||||||| |||||||| |||| |||||||| || ||||||||| |||||||||    
T  8858 ccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtcc 8759  T
Q  111 gtatccgtgcttcata 126  Q
    |||||| |||||||||    
T  8758 gtatccatgcttcata 8743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 46741 - 46627
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||  |||||||| |||| | |||||| || ||||||| | ||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccg 46642  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  46641 tatccgtgcttcata 46627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 22652035 - 22651921
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||| |||| |||||||| || ||||||||| || |||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccg 22651936  T
Q  112 tatccgtgcttcata 126  Q
    ||||||| |||||||    
T  22651935 tatccgtacttcata 22651921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 29510306 - 29510418
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgta 113  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||| |||| |||||||| || ||||||||| ||| |||| |||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagta 29510405  T
Q  114 tccgtgcttcata 126  Q
    |||||||||||||    
T  29510406 tccgtgcttcata 29510418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 2572056 - 2572170
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||  ||||  || |||| || |||||| || ||||||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccg 2572155  T
Q  112 tatccgtgcttcata 126  Q
    ||||| |||||||||    
T  2572156 tatccatgcttcata 2572170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 22197743 - 22197856
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||| ||||||||||||||| || |||||||||| |||||||||||||||| ||||| || ||||||||||| | || ||||||||| ||||||||       
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgtctag 22197842  T
Q  113 atccgtgcttcata 126  Q
    ||||||||||||||    
T  22197843 atccgtgcttcata 22197856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 36450753 - 36450829
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||| ||||||||    
T  36450753 ccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 36450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 926787 - 926902
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||| ||||||| |||||  ||| |||||| ||||||||||||  |||| || |||| |||||||| || ||||||||| ||||||| |    
T  926787 ccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttc 926886  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  926887 gtatccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 15816129 - 15816204
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 15816204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 13436964 - 13437064
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||||||| |||| |||||||  ||  |||||||| ||| ||||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccg 13437063  T
Q  112 t 112  Q
    |    
T  13437064 t 13437064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 18170481 - 18170577
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||| ||||||||||  |||||||||| ||||||||||||| ||| ||||||||| |||| |||||||| || ||| ||||||||||||    
T  18170481 ccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgtg 18170577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 18634049 - 18634145
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||| ||||||||||  |||||||||| ||||||||||||| ||| ||||||||| |||| |||||||| || ||| ||||||||||||    
T  18634049 ccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggtatccgtg 18634145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 25566900 - 25566836
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgt 25566836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 4948712 - 4948657
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagtt 66  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4948712 ccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 20873129 - 20873042
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||  | |||||| |||| |||||||| || |||||||    
T  20873129 ccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 8343031 - 8342967
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||| | |||||||||    
T  8343031 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgt 8342967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 24613580 - 24613509
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtg 83  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  24613580 ccgacaccgacacttgtaattacacttaattatgtgat-ttttcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 4298887 - 4298993
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||||  |||||||| |||||||| ||     ||||||  || ||||||||| |    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatc-----tgtgtc--gtgtccgtgtccat 4298979  T
Q  113 atccgtgcttcata 126  Q
    ||||||||||||||    
T  4298980 atccgtgcttcata 4298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 8343375 - 8343309
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||| ||||||||||||||| || ||||||||||||||||||||||||||| | |||||||||||    
T  8343375 cgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgt 8343309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 4673426 - 4673538
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||| || |||||||||||| ||||||| | |||||||||||||||||||  |||||||| |||| |||||| | || ||||||| | ||||| |||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgt 4673525  T
Q  113 atccgtgcttcata 126  Q
    || |||||||||||    
T  4673526 at-cgtgcttcata 4673538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 22596054 - 22595981
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    |||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| |||||||| |||| |||||    
T  22596054 ccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 24413558 - 24413674
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaa-ttattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    ||||||| ||||||| ||||||| |||||||||||  |||| ||||| ||||||   ||||| || ||| |||||||| || ||||| ||| ||||||||    
T  24413558 ccgacactgacacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtccgtgtc 24413657  T
Q  110 cgtatccgtgcttcata 126  Q
    |||||||||||||||||    
T  24413658 cgtatccgtgcttcata 24413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 24858070 - 24857954
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttttt---caaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgt 108  Q
    ||||| ||||||||||| |||| |||||||||||||||||||   ||||||||||  |||||||| ||||   |||||| || ||||||||| | |||||    
T  24858070 cgacaacgacacttgta-ttacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgt 24857972  T
Q  109 ccgtatccgtgcttcata 126  Q
    |||||||||| |||||||    
T  24857971 ccgtatccgttcttcata 24857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 29447111 - 29447170
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    |||||||||||||||| ||||  |||||||||||||||| ||||||||||||||||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcg 29447170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 30271291 - 30271366
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||| | ||||||||||||| ||| |||||||||||||||||||| ||||| |||||||| |||| ||||||||    
T  30271291 cgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 31514930 - 31514867
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgt 76  Q
    ||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||    
T  31514930 acaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgtcagtgt 31514867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 28384995 - 28385101
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||| | ||||||| |||||||||| ||||| |||| |||||||   |||||||| ||| |||||||| || |||| | |||||||||| |||    
T  28384995 gacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgttcagtatccgtgttcgt 28385094  T
Q  113 atccgtg 119  Q
    |||||||    
T  28385095 atccgtg 28385101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 30077386 - 30077439
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||||||||    
T  30077386 ccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattag 30077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 5813652 - 5813576
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||| |||| || || ||||||| |||||||||||||||| |||||||| ||||  |||||||    
T  5813652 ccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccg 5813576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 25192350 - 25192422
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||| ||||||  ||||||||||| | |||||||||||||||| |||||||| |||| ||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccg 25192422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 31557054 - 31556955
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||||||||  |||||||| |||| |||| ||  ||  |||||||| ||||| |||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgtatccgt 31556956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattatt 62  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 44067569 - 44067461
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||||| ||||||| ||| ||||||| ||||| |||||||||||   ||||||| |||| |||||| | || ||||| ||| |||||||| || ||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccg 44067470  T
Q  118 tgcttcata 126  Q
    |||||||||    
T  44067469 tgcttcata 44067461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 4786337 - 4786445
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||| | ||||||| ||||||||||||||||| | ||||||||| | ||||||| |||| ||||||      |||| |||| || |||||     
T  4786337 ccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc------gtgttcggtgtcagtgtct 4786430  T
Q  111 gtatccgtgcttcat 125  Q
    |||||||||||||||    
T  4786431 gtatccgtgcttcat 4786445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 18407772 - 18407717
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcgg 18407717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 24362217 - 24362316
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||| | ||||||||||||  ||||||| ||||  ||||| | || || |||||| ||||| |||||||| ||||||||||    
T  24362217 taattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcata 24362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 41831946 - 41832001
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgg 41832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 17468508 - 17468568
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    ||||||| |||||||||||||| | | |||||||||||||| ||||||||| |||||||||    
T  17468508 cgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtcg 17468568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 21465471 - 21465407
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgt 76  Q
    ||||||| ||||||||||||||   ||||||| |||||||||||||||||||| |||||| ||||    
T  21465471 cgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtccgtgt 21465407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 44694851 - 44694791
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    ||||| || ||||||||||||||||| |||||||||||||||| |||||||| | ||||||    
T  44694851 ccgacgccaacacttgtaattacgcttaattatgtgattttttaaaattatttgctgtgtc 44694791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 11927086 - 11927137
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||||||||| | ||||||| ||||||||||||||||| |||||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 13844595 - 13844662
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||| | ||||||| || |||||||||||||| ||||||||||||  ||||||| ||||    
T  13844595 ccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgt 13844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 20679396 - 20679447
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 24669492 - 24669441
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||||||||||||||||||| ||||||||||| ||||  |||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 36934714 - 36934615
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||||  ||||||||||||||||||| |||||||||  ||||||  ||||||||||||| || ||||  ||| |  || ||||||||| |||||||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgtttgtatccgtatccatgcttcata 36934615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 41838131 - 41838198
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||| || | ||||||||||||||||||| |||||||||| |||||||  |||| ||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccg 41838198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 3025611 - 3025558
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||| ||||| | ||||||| ||||||||||||||||| ||||||||||||    
T  3025611 ccgacactgacacctataattacactgaattatgtgattttctcaaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 3677820 - 3677751
Alignment:
Q  37 gaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    ||||||||||||||||| ||||||||| |||||||| ||||| ||| |||| || ||||| | |||||||    
T  3677820 gaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtctgatatccgt 3677751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 7442902 - 7442829
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||| |||||||||||||| ||||||||||| ||||| | ||||||||||  |||| ||  ||||||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgtccg 7442829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 7658520 - 7658415
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgta 113  Q
    |||||||||  | ||||||| ||||||||||| ||||| ||||||||||||| ||||||| || |   |||| | ||||| |||| | ||||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgtatcgatgtctgtgttgtatccgatgtccgtgtccgta 7658421  T
Q  114 tccgtg 119  Q
    | ||||    
T  7658420 ttcgtg 7658415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 11944724 - 11944655
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttag 81  Q
    |||||||||||| | ||||||| |||| |||||||||||| |||||||||||   ||||||| |||||||    
T  11944724 cgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttag 11944655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 34897145 - 34897092
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||| |||||| | ||||||| ||||||||||||||||| ||||||||||||    
T  34897145 ccgacatcgacacatataattacactgaattatgtgattttctcaaattattag 34897092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 14134757 - 14134705
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagt 65  Q
    ||||||||||  | ||||||| ||||||||||||||||| |||||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattattagt 14134705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 24196628 - 24196672
Alignment:
Q  43 tgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccg 24196672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 31236580 - 31236643
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||| | |||||||  |||||||||||||||| ||||||||||||  ||||||| ||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 37283825 - 37283924
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||||| ||| ||||||||  ||| | |  ||| |||||||| ||  |||| ||| ||| ||| |||||||||||||||||    
T  37283825 taattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgtatccgtgcttcata 37283924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 4611578 - 4611528
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtg 77  Q
    ||||||| ||||||||||| ||||| ||||||||||||  |||||||||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcggtgtg 4611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 43737882 - 43737927
Alignment:
Q  81 gtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| || ||||||||| |||||||| ||||||||||||||||    
T  43737882 gtgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcata 43737927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 9414876 - 9414948
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||| |||||| ||||| | ||||||||||||||| |||  |||||||| || ||||||| ||| ||||||    
T  9414876 gacaccaacacttataattgcactgaattatgtgattatttttaattattaattatgtcggtatgtcagtgtc 9414948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 22493536 - 22493492
Alignment:
Q  29 attacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||| ||||||||||||||||||| ||||||| ||| |||||||    
T  22493536 attacactgaattatgtgattttttaaaattatcagtggtgtcgg 22493492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 27101548 - 27101508
Alignment:
Q  38 aattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||||||||||||||||  ||||||| ||||    
T  27101548 aattatgtgattttttcaaattattagcggtgtcggcgtgt 27101508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 28745557 - 28745505
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||| ||||| ||||| ||||  |||||||||||| ||||||||||||||||    
T  28745557 cgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattag 28745505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 33405383 - 33405435
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    ||||||||||||| | ||||||| || ||||||||| |||| |||||||||||    
T  33405383 ccgacaccgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 35519833 - 35519865
Alignment:
Q  38 aattatgtgattttttcaaattattagttgtgt 70  Q
    ||||||||||||||||||||||||||| |||||    
T  35519833 aattatgtgattttttcaaattattagctgtgt 35519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 30335476 - 30335362
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||||||| |||||||||| || |||||||| ||||||||||||||||||||||||||| ||| ||||||||| || ||||| |  |||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctgagatccgtgtccg 30335377  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  30335376 tatccgtgcttcata 30335362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 21374706 - 21374808
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgt 118  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||||||||     ||||||||| |||||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtcc-----gtgtccggtgtccgtgtccgtatccgt 21374800  T
Q  119 gcttcata 126  Q
    ||||||||    
T  21374801 gcttcata 21374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 15657923 - 15657816
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||||||| || |||||||||  ||||||| |    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtgaccgtgtcgg 15657824  T
Q  112 tatccgtg 119  Q
    | ||||||    
T  15657823 tgtccgtg 15657816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 23058442 - 23058556
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttt-ttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||| || |||| | |||||| || ||||| |||||||||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtcaggtatccgtgtcc 23058541  T
Q  111 gtatccgtgcttcat 125  Q
    || ||||||||||||    
T  23058542 gtgtccgtgcttcat 23058556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 2438718 - 2438830
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||   | || |||||||| ||| |||||||| | |||||||    
T  2438718 ccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtc--agcgtcagtgtccgtgttttgtccggtgt-cgtgtcc 2438814  T
Q  111 gtatccgtgcttcata 126  Q
    ||||||||||||||||    
T  2438815 gtatccgtgcttcata 2438830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 19536396 - 19536492
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||| | |||||| || ||||||||| |||||    
T  19536396 ccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 19536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 34784982 - 34785096
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| || |||||||||||||| | |||  ||||||||||||||||||| |||||||| || ||||| ||  ||||||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccg 34785081  T
Q  112 tatccgtgcttcata 126  Q
    |||| ||||||||||    
T  34785082 tatctgtgcttcata 34785096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 15972933 - 15972857
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||| |||| ||||||||    
T  15972933 ccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccg 15972857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 20539674 - 20539774
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||||||| |||||||  |||| |||||||| || |||||| || ||||| ||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccg 20539773  T
Q  112 t 112  Q
    |    
T  20539774 t 20539774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 37559037 - 37558961
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||| |||||||| |||| ||||||||    
T  37559037 ccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccg 37558961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 18422022 - 18421947
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||||| |||| ||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccg 18421947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 87
Target Start/End: Original strand, 30717530 - 30717605
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||| ||||||||    
T  30717530 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccg 30717605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 26769569 - 26769462
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||||||||||||| |   || ||||||| |||||||||||||||||||||||| ||||  |||||      ||||||||| |||||||||||    
T  26769569 gacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtc------gtgtccggtgtccgtgtccgt 26769476  T
Q  113 atccgtgcttcata 126  Q
    ||||||||||||||    
T  26769475 atccgtgcttcata 26769462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 18841014 - 18841087
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||| | |||| |||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtcc 18841087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 974806 - 974746
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 30404849 - 30404925
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||   ||||||| |||| ||||||||    
T  30404849 ccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccg 30404925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 34337182 - 34337289
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    ||||||||||||||||||||     |||||||||||||||||||||||| |  |||||||| |||| | |||||| || || | ||||||||||||||||    
T  34337182 gacaccgacacttgtaatta-----aattatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgtatacggtatccgtgtccgt 34337276  T
Q  113 atccgtgcttcat 125  Q
    ||||||| |||||    
T  34337277 atccgtgattcat 34337289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 126
Target Start/End: Complemental strand, 31284080 - 31283993
Alignment:
Q  39 attatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||||||||| ||||||||||||  ||||||| |||| ||||| || ||| |||||||| |||||||||||||| ||||||||||    
T  31284080 attatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcata 31283993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 36756344 - 36756447
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||||||||  |||| |||||| | || || |||| | | ||||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgttcgtgtccg 36756443  T
Q  112 tatc 115  Q
    ||||    
T  36756444 tatc 36756447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 12668423 - 12668489
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| |||||| ||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgt 12668489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 21616806 - 21616708
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcat 125  Q
    ||||||| ||||||||||||||||| ||||||||||||  ||||||| ||||  ||||||| || |||||  || || |||||||||||||||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgcttcat 21616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 38117158 - 38117232
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||| |||||||||||||| | ||| |||||||||||||||||||||||| |||||||| |||| ||||||    
T  38117158 ccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 28412394 - 28412295
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||| ||||||||||||||||| |||||||||||   |||| |  ||||||||||||| || ||||| ||| ||||||||| ||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgcttcata 28412295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 11223864 - 11223922
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtc 71  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||| ||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 12940941 - 12941019
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtc 96  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||   |||| |||||||| || |||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 18276579 - 18276465
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgt 112  Q
    |||||||||||   ||||||| |||||||| |||||||| ||||||||||||  |||||||  | | |||||| |  | ||||||||| |||||||| ||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgt 18276480  T
Q  113 atccgtgcttcatat 127  Q
    |||||||||||||||    
T  18276479 atccgtgcttcatat 18276465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 20473382 - 20473320
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    |||||| |||||||||||||||| ||||||||| ||| ||||| |||||||||||||||||||    
T  20473382 ccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcgg 20473320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 21091781 - 21091696
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||| ||||||||||||||| ||||| ||||| ||||| | ||||||||||  |||||||||||| ||||||||  |||||||||    
T  21091781 gacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgtcttgtgtccg 21091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 21624327 - 21624226
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatg-tgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtc 109  Q
    ||||||||||||||||||||||| |||||||||| |  |||||| |||||||||| |||||||| |||| |||||| | || |||| |||| ||||| ||    
T  21624327 ccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatc 21624228  T
Q  110 cg 111  Q
    ||    
T  21624227 cg 21624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 23718082 - 23718010
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||| | ||||||| ||||||||||||| ||| ||||||||||||  |||||||||||| ||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccg 23718010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 24105754 - 24105682
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||| | ||||||| ||||||||||||| ||| ||||||||||||  |||||||||||| ||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccg 24105682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 6940310 - 6940239
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||| || |||||||| | ||||| |||||||||| |||||||| |||| ||||||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccg 6940239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 14996224 - 14996299
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||||||||| || |||||| ||| ||||||||||||||||| ||||||||  ||| ||||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccg 14996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 20242726 - 20242801
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtcc 86  Q
    ||||||||||||| | ||||||| ||||||||||||||||| | |||  |||||||||||||| |||| |||||||    
T  20242726 ccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtcc 20242801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 24894440 - 24894373
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||| ||||| | ||||||||||||||||||| |||||||||| |||||||| |||| ||||||||    
T  24894440 acacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccg 24894373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 37419802 - 37419727
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||||| |   |||||| |||| ||||||||    
T  37419802 cgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 33153483 - 33153417
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||| ||||||||||||||| ||||||||||||||||||| |||| ||||| ||| |||| ||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgt 33153417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 5040794 - 5040730
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatt--ttttcaaattattagttgtgtcgg 73  Q
    |||||||||||||||||||||||  ||||||||||||||  ||||||||||||||| ||| ||||    
T  5040794 ccgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgtatcgg 5040730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 42832277 - 42832342
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||| ||||||| ||||| ||||| ||||| ||||||||||||  ||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgt 42832342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 18255979 - 18256046
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||| |||||||  | |||||||||||||||| |||||||||  |||||| ||||||    
T  18255979 ccgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtcagtgtgt 18256046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 31808134 - 31808063
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||| ||||| | ||||||| ||||||||||||||||| | ||||||||||  |||||||||||| ||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 5367252 - 5367198
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagt 65  Q
    ||||||||||||| | ||||||| ||||||||||||||||  |||||||||||||    
T  5367252 ccgacaccgacacatataattacactgaattatgtgatttcctcaaattattagt 5367198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 28677953 - 28677907
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||| ||||||||||||||||||||||||||||||  |||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcgg 28677907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 21782833 - 21782890
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    ||||||| ||||||||||||||||| ||||||||||||  ||||||| |||| |||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 34691804 - 34691857
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||||| | ||||||| ||||||||| ||||||| ||||||||||||    
T  34691804 ccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 34714216 - 34714269
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||||| | ||||||| ||||||||| ||||||| ||||||||||||    
T  34714216 ccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 38442366 - 38442309
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtg 69  Q
    |||||||||||||| ||||||   |||||||||||||||||| |||| ||||||||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcattagttgtg 38442309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 39323316 - 39323271
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattag 39323271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 44860379 - 44860273
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| |||||||||| |||||| ||||||||||||  |||||        |||||||| || ||||| ||| | ||| ||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc--------agtgtccgtgtcgtgtctggtgtacgtatccg 44860288  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  44860287 tatccgtgcttcata 44860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 4882696 - 4882748
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||| |||||||||||||||| ||||||||| | |||||||||||| |||||    
T  4882696 cgacatcgacacttgtaattacactgaattatatcattttttcaaataattag 4882748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 18631462 - 18631513
Alignment:
Q  75 gtgttagtgtccgagttgtgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    ||||||||||||| || ||||||||| ||||||| |||||| ||||||||||    
T  18631462 gtgttagtgtccgtgtcgtgtccggtgtccgtgttcgtatctgtgcttcata 18631513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 29176495 - 29176566
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    ||||| |||||| ||||||| |||||||||||||  ||||||||||||||  |||||| | |||| ||||||    
T  29176495 acaccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgtctgcgtgtaagtgtc 29176566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 18420436 - 18420486
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||||||| ||||| |  |||||||||||||||| ||||||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattag 18420486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 44635558 - 44635520
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgatt 49  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  44635558 ccgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 5473388 - 5473331
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgt 68  Q
    ||||||||||||| |   ||||| | ||||||||||||||||||||||||||| ||||    
T  5473388 ccgacaccgacacataatattacaccgaattatgtgattttttcaaattattatttgt 5473331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 18622665 - 18622612
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagt 65  Q
    ||||||| |||| | ||||||| ||||||||||||||||| | |||||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgattttattaaattattagt 18622612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 27447082 - 27447115
Alignment:
Q  93 tgtccggtatccgtgtccgtatccgtgcttcata 126  Q
    |||||||| |||||||||||||||||||||||||    
T  27447082 tgtccggtgtccgtgtccgtatccgtgcttcata 27447115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 27460063 - 27459991
Alignment:
Q  35 ctgaattatgtgatttttt-caaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    ||||||||||| ||||||| ||||||||||| |||||||| |||| ||||||| | |||||||| || ||||||    
T  27460063 ctgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccta-ttgtgtcctgtgtccgtg 27459991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 37411244 - 37411305
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||| |||||| | |||| || ||||||||||||||||| ||||||||||||  |||||||    
T  37411244 cgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcgg 37411305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||||||| |||||||||  |||||||||| ||||| |||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 65
Target Start/End: Complemental strand, 11670789 - 11670761
Alignment:
Q  37 gaattatgtgattttttcaaattattagt 65  Q
    |||||||||||||||||||||||||||||    
T  11670789 gaattatgtgattttttcaaattattagt 11670761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 12224283 - 12224228
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtga--ttttttcaaattattag 64  Q
    |||||||||||||||||||||||  || |||||| ||  |||||||||||||||||    
T  12224283 ccgacaccgacacttgtaattacattggattatgggattttttttcaaattattag 12224228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 34221502 - 34221558
Alignment:
Q  17 ccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||||||||||| |   |||||||||  ||||||||||||||||| ||||||||    
T  34221502 ccgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtcgg 34221558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 461 - 575
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||| || | |||||||| |  |||| |||| |||||||||    
T  461 ccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtcc 560  T
Q  111 gtatccgtgcttcat 125  Q
    |||||||||||||||    
T  561 gtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 130538 - 130427
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtat 114  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||  ||||||||  ||| | |||||| || ||||||||| |||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtat 130439  T
Q  115 ccgtgcttcata 126  Q
    || |||||||||    
T  130438 ccatgcttcata 130427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 20231 - 20137
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| | |||||| || ||||||||| |||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 20137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 178819 - 178907
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatg-tgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggt 100  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| |||||||| || |||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggt 178907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 192256 - 192324
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||| | ||||||||| ||||| |||||||||||   ||||||| |||| ||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccg 192324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 17750 - 17825
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccga 88  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccga 17825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 13460 - 13359
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||  | |||||| ||||| |||    
T  13460 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatcc 13361  T
Q  111 gt 112  Q
    ||    
T  13360 gt 13359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 112
Target Start/End: Original strand, 21867 - 21968
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtcc 110  Q
    ||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||  | |||||| ||||| |||    
T  21867 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatcc 21966  T
Q  111 gt 112  Q
    ||    
T  21967 gt 21968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 51862 - 51795
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 51795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 241653 - 241558
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtg 107  Q
    |||||||||||||  ||||||| || ||||||||||||||| ||||||||||| |||||||| |||| |||||||| || ||||||||| ||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtg 241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 14580 - 14523
Alignment:
Q  21 cacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 4884 - 4953
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtga-ttttttcaaattattagttgtgtcggtgtgttag 81  Q
    |||||| |||||||||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  4884 gacaccaacacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 23829 - 23753
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||| | |||||| ||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgtccg 23753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 225274 - 225382
Alignment:
Q  18 cgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccgtatccg 117  Q
    |||||||| |||||||  || ||||||| ||||| |||||||||||  |||||||| |||| |||||||| || ||||||||| |||||||| || ||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 225373  T
Q  118 tgcttcata 126  Q
    || ||||||    
T  225374 tgtttcata 225382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 23479 - 23372
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||| ||||||| |||||||||||||||||||  | ||||||  |||||||| |||| ||||||     ||||||  || ||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtc-----tgtgtc--gtgtccgtgtccg 23387  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  23386 tatccgtgcttcata 23372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 23570 - 23497
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatt-ttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    |||||| ||||||| ||||||| ||||||||||||||| |||| || ||||||  ||||||||||||| |||||    
T  23570 cgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcagtgt 23497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 8069 - 8003
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||| ||||    
T  8069 ccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgt 8003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 8725 - 8619
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||||| ||||||  ||||| |||||||||||   ||||||||||  ||||||  |||| |||||||  || ||||||||| |||||||| |    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtccgtgtcgg 8626  T
Q  112 tatccgt 118  Q
    | |||||    
T  8625 tgtccgt 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 19626 - 19549
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||| |||| |||| |||||| | || |||||||    
T  19626 acacttgtaattacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 19549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 9957 - 9843
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||||||||| | ||||||| ||| ||| | ||||||| | |||  ||||| |||||||| ||||  ||||||  || ||||||||| ||||||||||    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccg 9858  T
Q  112 tatccgtgcttcata 126  Q
    |||||||||||||||    
T  9857 tatccgtgcttcata 9843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 8635 - 8696
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcgg 73  Q
    ||||||||||| |||||||||  | |||||||||||| ||||||||||||||||||||||||    
T  8635 cgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcgg 8696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 70338 - 70277
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||||||||  |||||||    
T  70338 ccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcg 70277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 135312 - 135385
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||||||||| | ||||||| | ||||||||||||||| ||||||||||||  ||||||||||||| |||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtc 135385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 92859 - 92791
Alignment:
Q  19 gacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||  ||||||| |||| ||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccg 92791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 123686 - 123612
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtga---ttttttcaaattattagttgtgtcggtgtgttagtgt 84  Q
    ||||||||||||||||||||| |||||||||||||   |||||| |||||||||| ||||| || |||| |||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgt 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 83219 - 83172
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaatt 59  Q
    ||||||||||| |||||||||| ||||||||||| ||||||| |||||    
T  83219 cgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 3849 - 3900
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 7319 - 7377
Alignment:
Q  20 acacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||| ||||||| || ||||||||||||||| |||||||||||||||||||| ||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgt 7377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 33375 - 33429
Alignment:
Q  24 ttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgt 33429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 7031 - 7092
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    |||||||| |||||||||||||  || |||||||| |||||||||||||||||| |||||||    
T  7031 ccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcg 7092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 45529 - 45617
Alignment:
Q  11 ccgacaccgacacttgtaattacgctgaattatgt-gattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccg 98  Q
    ||||||||||||||||||||||| |||||||||||   |||||| | || |||| ||||||||  |||| |||||||| ||||||||||    
T  45529 ccgacaccgacacttgtaattacactgaattatgtatttttttttagataattaattgtgtcgacgtgtcagtgtccgtgttgtgtccg 45617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 71784 - 71709
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgatttttt--caaattattagttgtgtcggtgtgttagtgtc 85  Q
    |||||| |||||| |||||||| ||||||| |||||||||||  ||||||||||| |||||||| |||| ||||||    
T  71784 cgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgtc 71709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 63831 - 63780
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    ||||||||||||||||||| | ||||||||||| ||||| ||||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattag 63780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 53236 - 53189
Alignment:
Q  15 caccgacacttgtaattacgctgaattatgtgattttttcaaattatt 62  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 90887 - 90808
Alignment:
Q  27 taattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgt 106  Q
    ||||||| ||||||||| ||||||| ||||||||||| | |||| ||||||| |||||| | || |||||| ||||||||    
T  90887 taattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtccagtatccgt 90808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 263372 - 263475
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    |||||| ||||||| ||||||| |||||||||||| |||| ||||||||||||  |||| |   ||| |||||||| || || ||| || ||||||||||    
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccg 263471  T
Q  112 tatc 115  Q
    ||||    
T  263472 tatc 263475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 87
Target Start/End: Original strand, 10509 - 10546
Alignment:
Q  50 ttttcaaattattagttgtgtcggtgtgttagtgtccg 87  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10509 ttttcaaattattagctgtgtcggtgtgttagtgtccg 10546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 9747 - 9800
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagt 65  Q
    |||||||||||| | ||||||| |||||||| |||||||| |||||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagt 9800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 1076 - 1028
Alignment:
Q  30 ttacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    |||| ||||||||||| ||||||||||||||||||  ||||||||||||    
T  1076 ttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgt 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 25768 - 25819
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattatta 63  Q
    |||||||||||||| ||||||| || |||||||||||||| || ||||||||    
T  25768 cgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 19203 - 19089
Alignment:
Q  12 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgttagtgtccgagttgtgtccggtatccgtgtccg 111  Q
    ||||||||||| || |||| || ||||||||||| ||||||| |||||||||    |||||| ||||||||||||| ||  | || | | |||||||| |    
T  19203 cgacaccgacatttttaatcacactgaattatgtcatttttt-aaattattaaccatgtcggcgtgttagtgtccgtgtcatatctgatgtccgtgtctg 19105  T
Q  112 tatccgtgcttcatat 127  Q
    | ||||||||||||||    
T  19104 tgtccgtgcttcatat 19089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 174555 - 174594
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  174555 acaccgacatttgtaattacgctgaattatgtcatttttt 174594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 180068 - 180107
Alignment:
Q  14 acaccgacacttgtaattacgctgaattatgtgatttttt 53  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  180068 acaccgacatttgtaattacgctgaattatgtcatttttt 180107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 24071 - 24018
Alignment:
Q  25 tgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggtgtgt 78  Q
    ||||||||| || ||||||| |||||||  |||||||||| |||||||||||||    
T  24071 tgtaattacactaaattatgagatttttgaaaattattagctgtgtcggtgtgt 24018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 9006 - 8962
Alignment:
Q  13 gacaccgacacttgtaattacgctgaattatgtgattttttcaaa 57  Q
    ||||||||||||||| |||||| |||||||||| ||||| |||||    
T  9006 gacaccgacacttgtgattacgttgaattatgtcattttctcaaa 8962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 44529 - 44577
Alignment:
Q  16 accgacacttgtaattacgctgaattatgtgattttttcaaattattag 64  Q
    |||||||| | ||||||| ||||||||||||||||| ||||||| ||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttag 44577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 26428 - 26392
Alignment:
Q  36 tgaattatgtgattttttcaaattattagttgtgtcg 72  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgtcg 26392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University