View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16231_high_22 (Length: 224)
Name: NF16231_high_22
Description: NF16231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16231_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 158
Target Start/End: Original strand, 42697320 - 42697462
Alignment:
| Q |
16 |
caataactccaccaacactggttaagctatttatatctaaaacgttttttctcatcaacaccaccgttccttttatcttatgacccctattcaatatacc |
115 |
Q |
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| T |
42697320 |
caataactccaccaacactggttaagctatttatatctaaaacattttttctcatcaacaccaccgttccttttatcttatgacccctattcaatatccc |
42697419 |
T |
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| Q |
116 |
cgtcacccctgaaaacatctttgcaaataacttaatttattta |
158 |
Q |
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| T |
42697420 |
cgtcacccctgaaaacatctttgcaaataacttaatttattta |
42697462 |
T |
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