View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16231_high_5 (Length: 596)

Name: NF16231_high_5
Description: NF16231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16231_high_5
NF16231_high_5
[»] chr7 (49 HSPs)
chr7 (1-286)||(8346375-8346660)
chr7 (311-582)||(8346701-8346968)
chr7 (1-293)||(8329888-8330179)
chr7 (1-289)||(8343646-8343930)
chr7 (339-525)||(8330202-8330391)
chr7 (339-522)||(8343957-8344147)
chr7 (1-291)||(24725316-24725609)
chr7 (1-288)||(4247356-4247641)
chr7 (29-288)||(44944717-44944978)
chr7 (4-289)||(14055250-14055539)
chr7 (4-289)||(14365278-14365567)
chr7 (1-287)||(5058530-5058813)
chr7 (1-289)||(27221417-27221699)
chr7 (1-288)||(5715290-5715570)
chr7 (1-260)||(17811375-17811633)
chr7 (99-288)||(24990012-24990200)
chr7 (104-289)||(26281256-26281439)
chr7 (139-290)||(9685224-9685375)
chr7 (4-289)||(7730206-7730472)
chr7 (1-218)||(20570729-20570944)
chr7 (144-288)||(22687649-22687793)
chr7 (12-279)||(11324988-11325252)
chr7 (150-289)||(39182259-39182397)
chr7 (150-288)||(11326386-11326524)
chr7 (164-281)||(8571250-8571367)
chr7 (4-288)||(21846294-21846554)
chr7 (97-289)||(26617415-26617606)
chr7 (130-267)||(27509914-27510051)
chr7 (1-288)||(6916786-6917063)
chr7 (1-87)||(8329823-8329909)
chr7 (4-87)||(8346313-8346396)
chr7 (150-248)||(1977692-1977790)
chr7 (196-290)||(21157811-21157905)
chr7 (1-151)||(26565392-26565540)
chr7 (4-85)||(39182357-39182438)
chr7 (1-88)||(24989618-24989704)
chr7 (540-582)||(8330415-8330457)
chr7 (202-292)||(8630001-8630091)
chr7 (193-288)||(30294175-30294267)
chr7 (194-289)||(26565663-26565758)
chr7 (1-88)||(30294444-30294531)
chr7 (215-284)||(4574475-4574544)
chr7 (545-582)||(8344183-8344220)
chr7 (1-88)||(8572336-8572422)
chr7 (5-121)||(27509260-27509374)
chr7 (150-190)||(8329867-8329907)
chr7 (1-48)||(8304324-8304371)
chr7 (150-190)||(8346354-8346394)
chr7 (45-85)||(9685235-9685275)
[»] chr4 (34 HSPs)
chr4 (4-289)||(5361812-5362093)
chr4 (5-266)||(9911259-9911518)
chr4 (1-286)||(5375666-5375950)
chr4 (99-289)||(13023566-13023758)
chr4 (1-290)||(10142897-10143185)
chr4 (1-288)||(9770112-9770397)
chr4 (1-289)||(36120823-36121108)
chr4 (100-289)||(8889227-8889415)
chr4 (4-287)||(17466080-17466361)
chr4 (139-290)||(13551602-13551753)
chr4 (1-290)||(23064805-23065094)
chr4 (96-289)||(37240261-37240448)
chr4 (155-288)||(8011212-8011345)
chr4 (194-287)||(7044728-7044821)
chr4 (195-292)||(24719513-24719610)
chr4 (184-289)||(18459733-18459838)
chr4 (1-137)||(24719725-24719860)
chr4 (194-288)||(4156763-4156857)
chr4 (1-151)||(8010980-8011129)
chr4 (184-284)||(7815561-7815661)
chr4 (1-84)||(6346799-6346882)
chr4 (183-290)||(6347088-6347195)
chr4 (208-290)||(7452418-7452499)
chr4 (1-88)||(7044961-7045048)
chr4 (1-144)||(9149566-9149709)
chr4 (1-74)||(37240450-37240524)
chr4 (215-288)||(9149791-9149864)
chr4 (1-51)||(55476223-55476273)
chr4 (153-190)||(4157053-4157090)
chr4 (184-224)||(7803070-7803110)
chr4 (45-85)||(13551613-13551653)
chr4 (216-292)||(18327339-18327415)
chr4 (216-292)||(18437982-18438058)
chr4 (223-267)||(46664421-46664465)
[»] chr8 (34 HSPs)
chr8 (1-292)||(11879596-11879885)
chr8 (1-292)||(11897012-11897301)
chr8 (1-291)||(15294667-15294954)
chr8 (1-291)||(15475036-15475323)
chr8 (1-289)||(5922048-5922333)
chr8 (100-289)||(31424162-31424350)
chr8 (4-292)||(29384159-29384449)
chr8 (1-288)||(17646993-17647282)
chr8 (1-288)||(45403029-45403314)
chr8 (1-286)||(19704301-19704583)
chr8 (6-239)||(23142224-23142454)
chr8 (102-293)||(22910146-22910336)
chr8 (4-249)||(6810861-6811101)
chr8 (100-284)||(3094185-3094378)
chr8 (100-289)||(27836406-27836594)
chr8 (1-292)||(7489127-7489417)
chr8 (5-267)||(32424356-32424615)
chr8 (185-289)||(24056594-24056698)
chr8 (98-284)||(6292282-6292467)
chr8 (213-289)||(477101-477177)
chr8 (105-199)||(9212202-9212295)
chr8 (193-289)||(15761473-15761569)
chr8 (6-121)||(15761207-15761322)
chr8 (15-88)||(8582241-8582314)
chr8 (243-287)||(9036757-9036801)
chr8 (241-289)||(23136348-23136396)
chr8 (1-71)||(17566313-17566383)
chr8 (150-267)||(15231745-15231862)
chr8 (1-86)||(24056414-24056499)
chr8 (45-85)||(22910193-22910233)
chr8 (45-85)||(31424261-31424301)
chr8 (6-72)||(22910052-22910118)
chr8 (1-87)||(24414131-24414217)
chr8 (45-85)||(9212246-9212286)
[»] chr5 (22 HSPs)
chr5 (1-288)||(43234868-43235153)
chr5 (1-287)||(18843716-18844000)
chr5 (1-289)||(19578941-19579228)
chr5 (4-289)||(21059003-21059285)
chr5 (1-287)||(23172272-23172560)
chr5 (29-292)||(18051405-18051663)
chr5 (1-280)||(27340031-27340307)
chr5 (4-288)||(38158111-38158383)
chr5 (122-289)||(22645681-22645849)
chr5 (4-267)||(41688513-41688772)
chr5 (96-239)||(19979648-19979790)
chr5 (1-239)||(20320992-20321228)
chr5 (163-288)||(20923718-20923843)
chr5 (215-284)||(24106645-24106714)
chr5 (214-286)||(19042444-19042516)
chr5 (222-286)||(20320926-20320990)
chr5 (1-144)||(26021464-26021604)
chr5 (1-48)||(41427657-41427704)
chr5 (147-189)||(19042406-19042448)
chr5 (1-51)||(19377838-19377888)
chr5 (150-188)||(43005747-43005785)
chr5 (45-85)||(19979697-19979737)
[»] chr1 (37 HSPs)
chr1 (1-288)||(23528656-23528941)
chr1 (1-292)||(16125299-16125591)
chr1 (1-289)||(13100190-13100475)
chr1 (1-290)||(9954877-9955166)
chr1 (1-289)||(25146612-25146898)
chr1 (59-291)||(9327116-9327347)
chr1 (1-289)||(9351907-9352193)
chr1 (3-289)||(18304657-18304941)
chr1 (1-292)||(21846118-21846401)
chr1 (34-288)||(13276143-13276395)
chr1 (1-286)||(19009792-19010073)
chr1 (98-287)||(42180005-42180193)
chr1 (4-286)||(12513283-12513553)
chr1 (96-288)||(9128778-9128969)
chr1 (4-189)||(47785958-47786140)
chr1 (150-290)||(41032661-41032801)
chr1 (1-287)||(17869594-17869873)
chr1 (6-199)||(32881416-32881600)
chr1 (155-291)||(17055995-17056131)
chr1 (213-288)||(30619075-30619150)
chr1 (184-290)||(18337547-18337652)
chr1 (193-288)||(14074404-14074499)
chr1 (1-88)||(16434709-16434794)
chr1 (107-211)||(18228278-18228380)
chr1 (201-288)||(12800623-12800710)
chr1 (1-88)||(17055763-17055850)
chr1 (222-289)||(34478833-34478900)
chr1 (5-85)||(41032621-41032701)
chr1 (243-290)||(47785790-47785837)
chr1 (1-71)||(14074327-14074397)
chr1 (196-277)||(8772715-8772796)
chr1 (196-289)||(24117006-24117099)
chr1 (202-285)||(27917495-27917578)
chr1 (5-72)||(30619156-30619223)
chr1 (196-230)||(27502239-27502273)
chr1 (45-85)||(9128831-9128871)
chr1 (45-85)||(9327206-9327246)
[»] scaffold0186 (1 HSPs)
scaffold0186 (1-292)||(8439-8726)
[»] chr6 (40 HSPs)
chr6 (1-288)||(15527954-15528239)
chr6 (4-289)||(23897810-23898092)
chr6 (4-289)||(30912253-30912542)
chr6 (1-291)||(17543574-17543872)
chr6 (1-288)||(26053140-26053425)
chr6 (1-288)||(26073193-26073478)
chr6 (1-289)||(7223518-7223800)
chr6 (62-288)||(17250057-17250280)
chr6 (1-289)||(19748332-19748618)
chr6 (1-292)||(17103198-17103480)
chr6 (99-242)||(21354786-21354928)
chr6 (23-289)||(10508883-10509153)
chr6 (122-266)||(22498848-22498992)
chr6 (163-290)||(6943464-6943591)
chr6 (150-289)||(27233268-27233407)
chr6 (120-289)||(11327532-11327701)
chr6 (120-288)||(7918342-7918510)
chr6 (129-285)||(2912218-2912373)
chr6 (196-289)||(18491074-18491167)
chr6 (209-289)||(5422798-5422878)
chr6 (1-154)||(7918194-7918343)
chr6 (193-267)||(4841953-4842025)
chr6 (211-286)||(3573984-3574059)
chr6 (1-88)||(4841673-4841760)
chr6 (1-87)||(2912105-2912191)
chr6 (1-88)||(11327406-11327493)
chr6 (1-88)||(22498284-22498371)
chr6 (211-289)||(10958239-10958317)
chr6 (184-289)||(12245108-12245213)
chr6 (196-261)||(18490998-18491063)
chr6 (196-285)||(27890137-27890225)
chr6 (1-88)||(3573744-3573831)
chr6 (196-261)||(18490922-18490987)
chr6 (44-85)||(27233267-27233308)
chr6 (196-285)||(33583766-33583855)
chr6 (196-263)||(8285760-8285827)
chr6 (110-166)||(27614594-27614651)
chr6 (220-265)||(7359871-7359916)
chr6 (224-281)||(8545030-8545087)
chr6 (45-85)||(17250155-17250195)
[»] chr2 (31 HSPs)
chr2 (1-292)||(31237820-31238110)
chr2 (5-287)||(35565802-35566082)
chr2 (4-289)||(15588702-15588979)
chr2 (1-292)||(1404779-1405068)
chr2 (120-290)||(30432417-30432587)
chr2 (1-290)||(36429846-36430133)
chr2 (97-286)||(31578007-31578194)
chr2 (1-289)||(20063713-20064008)
chr2 (159-289)||(23863321-23863451)
chr2 (4-205)||(1690575-1690774)
chr2 (155-286)||(25539222-25539353)
chr2 (162-288)||(19491855-19491982)
chr2 (193-289)||(1690796-1690892)
chr2 (193-289)||(5395682-5395778)
chr2 (183-291)||(15266079-15266187)
chr2 (194-288)||(16766710-16766804)
chr2 (1-151)||(16766922-16767070)
chr2 (196-260)||(34841584-34841648)
chr2 (1-121)||(13502517-13502637)
chr2 (193-252)||(31023259-31023318)
chr2 (1-121)||(19262160-19262279)
chr2 (1-151)||(25538989-25539138)
chr2 (1-151)||(27406927-27407076)
chr2 (193-292)||(17995051-17995150)
chr2 (209-292)||(19245149-19245232)
chr2 (1-88)||(30433013-30433100)
chr2 (203-289)||(24473335-24473420)
chr2 (150-190)||(13502561-13502601)
chr2 (201-289)||(27750194-27750282)
chr2 (150-189)||(16766987-16767026)
chr2 (210-267)||(15516610-15516667)
[»] chr3 (44 HSPs)
chr3 (1-290)||(28745768-28746061)
chr3 (122-289)||(29067283-29067450)
chr3 (6-290)||(39427900-39428183)
chr3 (8-289)||(8155980-8156261)
chr3 (1-290)||(24620041-24620334)
chr3 (4-288)||(22137278-22137559)
chr3 (5-215)||(42696920-42697129)
chr3 (1-283)||(17064326-17064592)
chr3 (139-287)||(3449272-3449419)
chr3 (139-288)||(20756039-20756188)
chr3 (96-279)||(21963438-21963620)
chr3 (96-279)||(21985874-21986056)
chr3 (162-288)||(30727694-30727820)
chr3 (101-267)||(22494731-22494889)
chr3 (184-289)||(27676355-27676460)
chr3 (97-199)||(15515195-15515296)
chr3 (142-291)||(25870350-25870508)
chr3 (139-289)||(22356032-22356183)
chr3 (194-288)||(24649724-24649818)
chr3 (196-289)||(15806543-15806635)
chr3 (1-88)||(27676634-27676721)
chr3 (192-291)||(17796374-17796473)
chr3 (192-291)||(19104814-19104913)
chr3 (184-266)||(10872971-10873053)
chr3 (4-131)||(25870169-25870294)
chr3 (1-88)||(6136413-6136500)
chr3 (1-88)||(13286142-13286229)
chr3 (209-287)||(28135723-28135801)
chr3 (2-88)||(28135960-28136046)
chr3 (192-291)||(17796265-17796364)
chr3 (192-291)||(17796483-17796582)
chr3 (192-291)||(19104705-19104804)
chr3 (192-291)||(19104923-19105022)
chr3 (1-121)||(20756188-20756307)
chr3 (4-88)||(3449157-3449241)
chr3 (6-88)||(29067475-29067557)
chr3 (196-288)||(13005927-13006019)
chr3 (150-190)||(27676637-27676677)
chr3 (240-284)||(42696870-42696914)
chr3 (1-88)||(10872559-10872646)
chr3 (150-190)||(6136457-6136497)
chr3 (150-190)||(13286145-13286185)
chr3 (1-45)||(22971050-22971094)
chr3 (150-190)||(25870210-25870250)
[»] scaffold0417 (1 HSPs)
scaffold0417 (1-289)||(7299-7585)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-289)||(93549-93834)
[»] scaffold0510 (2 HSPs)
scaffold0510 (150-289)||(91-231)
scaffold0510 (4-85)||(51-131)
[»] scaffold0603 (2 HSPs)
scaffold0603 (1-151)||(8803-8952)
scaffold0603 (209-292)||(9070-9153)
[»] scaffold0048 (4 HSPs)
scaffold0048 (196-289)||(48825-48918)
scaffold0048 (1-86)||(48506-48591)
scaffold0048 (1-86)||(61158-61243)
scaffold0048 (194-248)||(61418-61472)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-88)||(56269-56356)
scaffold0016 (123-167)||(58746-58790)
[»] scaffold0036 (1 HSPs)
scaffold0036 (184-289)||(37191-37296)
[»] scaffold0115 (1 HSPs)
scaffold0115 (203-288)||(35103-35188)
[»] scaffold0534 (1 HSPs)
scaffold0534 (1-71)||(885-955)
[»] scaffold1892 (1 HSPs)
scaffold1892 (185-250)||(886-951)


Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 8346375 - 8346660
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||| ||||||||||||| || |||| |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||       |||||    
T  8346375 aatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggattttaccaaaaaaataata 8346474  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  8346475 atactaaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggatttttcctattttg 8346574  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaaca 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  8346575 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 311 - 582
Target Start/End: Original strand, 8346701 - 8346968
Alignment:
Q  311 ccaaagtaaaggattttgacaacaatggtttaattaacaagtttaaagcaaacattatcataaactttaacactgtaagataataataataatcaaacta 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  8346701 ccaaagtaaaggattttgacaacaatggtttaattaacaagtttaatgcaaccattatcataaactttaacactataagataataataataatcaaacta 8346800  T
Q  411 aaggtttgaaaacattatattgtaataaaatcaaagtaacaagttcaatgcaaaaattatcattaacatgactactattagttagagataatcaaacatt 510  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8346801 aaggtttgaaaa-attatattgtaataaaatcaaagtaacaatttcaatgcaaaaattatcattaacatgactactattagttagagataatcaaacatt 8346899  T
Q  511 atgaaaatcttccctnnnnnnnnnnnnnncattatgaaaatctgagttgttttgttttctaggtcattatag 582  Q
    |||||||||||||||              |||||||||||||||||||||||||||||||||||||||||||    
T  8346900 atgaaaatcttccct---aaaaaaaaaaacattatgaaaatctgagttgttttgttttctaggtcattatag 8346968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 8329888 - 8330179
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||| ||||||||||||| || |||| |||||||||||||||||||||| | |||| |||||||||||||||||||||||||        ||||    
T  8329888 aatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggattttaccaaaaaa--aata 8329985  T
Q  101 a-tactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    | || ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  8329986 aataataagtatatgttataaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaatttttcctatttt 8330085  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgattt 293  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  8330086 gggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaatgattt 8330179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 8343646 - 8343930
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||| ||||||||| || |||| |||||||||||||||| ||||| | |||||||||||||| |||||||||||||         |||||    
T  8343646 aatcaaaatcgaagtattttactcaactacttttgtagaattgatataaaaaatcgtaaaatcgcaatcaaagtcaatggatttta----aaaaataata 8343741  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||||    
T  8343742 atactaaatataacttataaaatggtatataatcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggatttttcatattttg 8343841  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||    
T  8343842 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaatg 8343930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 339 - 525
Target Start/End: Original strand, 8330202 - 8330391
Alignment:
Q  339 tttaattaacaagtttaaagcaaacattatcataaactttaacactgtaagataa---taataataatcaaactaaaggtttgaaaacattatattgtaa 435  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  8330202 tttaattaacaagtttaatgcaaacattatcataaactttaacactgtaagataataataataataatcaaactaaaggtttgaaaacattatattgtaa 8330301  T
Q  436 taaaatcaaagtaacaagttcaatgcaaaaattatcattaacatgactactattagttagagataatcaaacattatgaaaatcttccct 525  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8330302 taaaatcaaagtaacaagttcaatgcaaaaattatctttaacatgactactattagttagagataatcaaacattatgaaaatcttccct 8330391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 339 - 522
Target Start/End: Original strand, 8343957 - 8344147
Alignment:
Q  339 tttaattaacaagtttaaagcaaacattatcataaactttaacactgtaagataataataataatcaaactaaaggtttgaaaacattatattgtaataa 438  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8343957 tttaattaacaagttaaatgcaaacattatcataaactttaacactgtaagataataataataatcaaactaaaggtttgaaaacattatattgtaataa 8344056  T
Q  439 aatcaaagtaacaagttcaatgcaaaaattatca-ttaacatgactacta------ttagttagagataatcaaacattatgaaaatcttc 522  Q
    | |||||||||||||||||||||||||||||||| |||||||||||||||      ||| |||||||||||||||||||||||||||||||    
T  8344057 agtcaaagtaacaagttcaatgcaaaaattatcatttaacatgactactatattagttaattagagataatcaaacattatgaaaatcttc 8344147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 24725316 - 24725609
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnnta--- 97  Q
    |||||||||| ||||||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||        |       
T  24725316 aatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaataa 24725415  T
Q  98 -ataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctat 196  Q
     |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| ||| |||||  |||||||||  ||||    
T  24725416 aataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtcaaatcgtaatcaaaattgatggattttgcctat 24725514  T
Q  197 tttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||| ||| |||||||||||||||||||    
T  24725515 tttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttgacaacaatgat 24725609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 4247641 - 4247356
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||| || ||||||||||||| |  | || |||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||        ||||    
T  4247641 aatcaaattcaaaggattttactcaaggatttttgtagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggattttacctaaaaaa-aata 4247543  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||| ||| || |||||||||||| |||||||||||||||||||||| |||||||||||| |||||| ||| |||||  ||||||||    
T  4247542 atactaaatatatgttacaaa-tgatatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttg 4247444  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||||||||||||| ||| |||||| |||||||||||  ||||||||||||||||||||||||  |  ||||||||||||||||    
T  4247443 ggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaat 4247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 29 - 288
Target Start/End: Original strand, 44944717 - 44944978
Alignment:
Q  29 acttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatactaaatatatgttataaaatggtat 128  Q
    |||| |||||||| ||||||||||||  | ||||||||||||||||| || || ||||||       |||||||||||||||||||||||||| ||||||    
T  44944717 acttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagactttaccaaaaaa-taataatactaaatatatgttataaa-tggtat 44944814  T
Q  129 atagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttga 228  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||| |||||| |||||||||  ||||||| |||||||||||||||||||| |||||||    
T  44944815 atagtcataaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttga 44944914  T
Q  229 ag----gtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  44944915 aggtgagtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 4 - 289
Target Start/End: Complemental strand, 14055539 - 14055250
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaa----- 98  Q
    ||||||||||||||||||||| || |||| |||||||  ||||||||||||    ||||||||||||||||||||||||||||||        ||         
T  14055539 caaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaacaaaaaaaaaaga 14055440  T
Q  99 taatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||||  ||||||    
T  14055439 taatattaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattt 14055341  T
Q  199 tgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    | | |||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| || ||  ||||||| |||||||||    
T  14055340 tagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 4 - 289
Target Start/End: Complemental strand, 14365567 - 14365278
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaa----- 98  Q
    ||||||||||||||||||||| || |||| |||||||  ||||||||||||    ||||||||||||||||||||||||||||||        ||         
T  14365567 caaaatcgaaggattttactcaactacttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaacaaaaaaaaaaga 14365468  T
Q  99 taatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||| |||||||||  ||||||    
T  14365467 taatattaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattt 14365369  T
Q  199 tgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    | | |||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| || ||  ||||||| |||||||||    
T  14365368 tagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 5058813 - 5058530
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||||||||||| || |  | || ||| |||| ||||||| ||||  | ||||||||||||||||| ||||| ||||||       |||||    
T  5058813 aatcaaaatcgaaggattttaatcaaggaattttgt-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaa-taata 5058716  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||   |||||||  |||||||     
T  5058715 atactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctatttta 5058617  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
     |||||||||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  5058616 agattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 27221699 - 27221417
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||||   |||| |||||||| ||| || |||||  | |||||||||| |||||| |  |||| ||||        || |    
T  27221699 aatcaaaatcgaaggattttactcggagacttttgtagaatcgatgtaggaaattgtaaaatcgcaattaaaatcgactgattgtaccaaa-----aaaa 27221605  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    | |||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||  | |||||     
T  27221604 aaactatatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaatttta 27221506  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
     |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||  ||||||| |||||||||    
T  27221505 agattctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 5715570 - 5715290
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||| ||||||||||| |  |||| |||||||| |||||| ||||| || ||||||||||||||||| ||| ||||||||        || |    
T  5715570 aatcaaaatcgagggattttactcaaggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatgaattttaccaaa-----aaaa 5715476  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    | | | ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| ||| |||||   |||||||    
T  5715475 aaaatgaatatatgttataaa-tggtatataatcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttg 5715377  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    | ||||||||||| |||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  5715376 gaattctactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 17811633 - 17811375
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||| |||||||||| |  |||| |||||||| ||||||  ||||  | ||||||||||||||||| ||||||||||||       || ||    
T  17811633 aatcaaaatcgaaagattttactcaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaatatta 17811534  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||| ||||||||| ||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||| || |||||| ||||||||     
T  17811533 atattaaatatattttataaa-tggtatataattataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctatttta 17811435  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaatttta 260  Q
      ||||||||||||||||||||||||||||||||| |||||| |||||||  ||||||||    
T  17811434 aaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcaagaatttta 17811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 99 - 288
Target Start/End: Original strand, 24990012 - 24990200
Alignment:
Q  99 taatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
    ||||||||||||||||||||||| | ||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||| |||||||||  ||||||    
T  24990012 taatactaaatatatgttataaa-tagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattt 24990110  T
Q  199 tgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    | ||||||||||||||||||||||||||| |||| ||||||||| ||||||||| |||||| ||||||| ||| | ||||||||||||||    
T  24990111 taggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaat 24990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 104 - 289
Target Start/End: Original strand, 26281256 - 26281439
Alignment:
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||  |||||| |||||||||   |||||||| |    
T  26281256 ctaaatataagttataaa-tggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaac-aaaatcgatggattttgcttattttggaa 26281353  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||||||    
T  26281354 ttctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaatg 26281439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 9685224 - 9685375
Alignment:
Q  139 atgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaa 238  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||||||||| ||    
T  9685224 atgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaa 9685323  T
Q  239 agtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    |||||||||||||| ||||||||||| || |||  |||||||||||||||||    
T  9685324 agtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatga 9685375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 289
Target Start/End: Original strand, 7730206 - 7730472
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    |||||||||| | |||||||| || |||| |||| ||||||||||||||||  | ||||||||||||||||  ||||||||||||        || ||||    
T  7730206 caaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaatcaaaattgatggattttaccaacaaaaaaaaaata 7730305  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    ||||||||||||||||||                  ||| ||||||||||||||||||||||||| |||| |||||| |||||||||| ||||||||| |    
T  7730306 ctaaatatatgttataaa------------------tgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaa 7730387  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  7730388 ttctactgtggatttgagttgttaaaggtgaagaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 20570729 - 20570944
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||| ||| |||||||||| |  |||| |||||||| |||||||||||| || ||||| ||||||||||| ||||| ||||||        ||||    
T  20570729 aatcaaaattgaaagattttactcaaggacttttgtagaatcgatataagaaattataaaatcacaatcaaaatcgatggactttaccaaaaaag-aata 20570827  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||| ||||||||| ||||||||     
T  20570828 atactaaatatatgttataaa-tggtatatagtcataaatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttt 20570926  T
Q  201 ggattctactatggattt 218  Q
     ||||||||||| |||||    
T  20570927 agattctactatagattt 20570944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 144 - 288
Target Start/End: Original strand, 22687649 - 22687793
Alignment:
Q  144 ttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcg 243  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||  ||||||||||||||| | |||||||||||| ||||||| ||||||||||||    
T  22687649 ttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcg 22687748  T
Q  244 caaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||    
T  22687749 caaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 12 - 279
Target Start/End: Complemental strand, 11325252 - 11324988
Alignment:
Q  12 aaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatactaaatat 111  Q
    |||| |||||||| || ||||||||| |||||||||| |||||  | ||||  ||||||||||| ||||||||||||        || || |||||  ||    
T  11325252 aagggttttactcaactacttctgtaaaattgatata-gaaattgtaaaattacaatcaaaatcgatggattttaccaaaaaa--aaaaaaactaa--at 11325158  T
Q  112 atgttata---aaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattcta 208  Q
    ||||||||   || ||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||  ||| |||||  ||||||| | ||||||    
T  11325157 atgttataaataattggtatatagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaat-tatgaattttgcctattttagaattcta 11325059  T
Q  209 ctatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggatttt 279  Q
     |||||||||||||||||||||||||||||| || ||||||| |||||||||||||||| ||| |||||||    
T  11325058 ttatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 150 - 289
Target Start/End: Complemental strand, 39182397 - 39182259
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 249  Q
    |||||||||| ||||||||||||  |||||| |||||||||  |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  39182397 tataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaat 39182299  T
Q  250 cctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||  ||||||||||||| |||||||||||| ||||||||    
T  39182298 cctagattttaggatttaagtcaggattttgtcaacaatg 39182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 150 - 288
Target Start/End: Complemental strand, 11326524 - 11326386
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 249  Q
    |||| ||||| ||||||||||||| |||||| || ||||||  |||||||  ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  11326524 tataggaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaat 11326425  T
Q  250 cctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||| |||||||||||||| ||  ||||||||||||||||    
T  11326424 cctaaattttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 8571367 - 8571250
Alignment:
Q  164 aaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagga 263  Q
    |||||||||| |||||| |||| |||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  264 tttaggtcaggattttga 281  Q
    |||| ||| |||||||||    
T  8571267 tttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 21846294 - 21846554
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    |||||||||||||||||| || || |||| | |||||| ||||||||||||| | ||||| ||||||||||  ||||||||||||        |||||||    
T  21846294 caaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaattgatggattttacccaaata--aataata 21846391  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
     ||||||||||||||||| || |||||||||||| ||||||||                    ||||||| |||||| || ||||||  || |||| | |    
T  21846392 ttaaatatatgttataaa-tgatatatagtcataaatgactta--------------------tcgcaatcaaaatcgattgattttacctgttttagaa 21846470  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  21846471 ttctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 97 - 289
Target Start/End: Original strand, 26617415 - 26617606
Alignment:
Q  97 aataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctat 196  Q
    ||||||||||||||||||||||||| ||    ||||||||| |||||||||| || ||||  ||||||||||||||| |||||| || ||||||  ||||    
T  26617415 aataatactaaatatatgttataaa-tg----atagtcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattttgcctat 26617509  T
Q  197 --tttgggattctactat--ggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
      ||| | ||||||||||  | ||||  ||||||||||||||| ||||||||||||||||||||||||||||| | ||||| ||||| | |||||||    
T  26617510 attttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaacaatg 26617606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 130 - 267
Target Start/End: Original strand, 27509914 - 27510051
Alignment:
Q  130 tagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaa 229  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||  ||| |||||  |||||||   |||||||||| ||||||| |||||| |    
T  27509914 tagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttgga 27510013  T
Q  230 ggtgaagaaagtcgcaaaatcctgaattttaggattta 267  Q
     ||||||||| ||||||||||||  ||||||| |||||    
T  27510014 tgtgaagaaaatcgcaaaatcctttattttagaattta 27510051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 6917063 - 6916786
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||| |||||||||||||| || ||||   || ||| |||||||||||| || |||| |||||||||||| ||| ||||||||        ||||    
T  6917063 aatcaaaattgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcgatgaattttaccaacaaaaaaata 6916965  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
     || ||||||||||||||||  ||| ||| ||||||| |||||||| |||||||||||||||||||||||||| |||| | |||||||||  |  ||||     
T  6916964 -tattaaatatatgttataac-tggaata-agtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaaccgatggattttaac--tttta 6916870  T
Q  201 ggattctactatggatttgagtcgttgaaggtg-aagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    | ||||||||||| |||||||||     ||||| || ||| |||||||||||| ||||| | ||||||  || ||||||||||||||||    
T  6916869 gaattctactatgaatttgagtc-----aggtgaaaaaaaatcgcaaaatcctaaatttcaagatttaaatcgggattttgacaacaat 6916786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 8329823 - 8329909
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttac 87  Q
    ||||||||| |||||||||||||| || |||| |||||||||||||||||||||| | ||||||||||||||||||| |||||||||    
T  8329823 aatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaatcaaaatcaaaggattttac 8329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 8346313 - 8346396
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttac 87  Q
    ||||||||||||||||||||| || |||| | |||||||||||||||||||| | | ||||||||||||||||| |||||||||    
T  8346313 caaaatcgaaggattttactcaactacttttatagaattgatataagaaatcgtaatatcgcaatcaaaatcaaaggattttac 8346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 150 - 248
Target Start/End: Complemental strand, 1977790 - 1977692
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaa 248  Q
    ||||||||||| |||||||||||| |||||| | | |||||   |||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||    
T  1977790 tataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtggaaaaaatcgcaaaa 1977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 21157811 - 21157905
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    |||| ||||| | ||||||||||||||||||| | ||||  |||||||||||| ||||||||||| |||||| ||||| |||| |||||||||||    
T  21157811 ttttaggattttgctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaatttcgacaacaatga 21157905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 26565392 - 26565540
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| || |||| ||||||||  |||||| ||||| | |||| |||||||||||  ||||||||||||        ||||    
T  26565392 aatcaaaatcgaaggattttactcaactacttttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattttaccaaaacaaaaata 26565491  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagttta 151  Q
    ||  | ||||||||||||||| | ||||||||||||| |||||| ||||||    
T  26565492 at-gttaatatatgttataaact-gtatatagtcataaatgactcagttta 26565540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 39182438 - 39182357
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||||||||||||| || |||| |||||||| ||||||||||||  | ||||||||| ||||||| |||||||||    
T  39182438 caaaatcgaaggattttactcaactacttttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24989618 - 24989704
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||||||||||||||||  |  |||| |||||||| |||||| ||||| || ||||||||||||||||| ||||||||||||    
T  24989618 aatcaaaatcgaaggattttacta-aggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatggattttacc 24989704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 540 - 582
Target Start/End: Original strand, 8330415 - 8330457
Alignment:
Q  540 cattatgaaaatctgagttgttttgttttctaggtcattatag 582  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8330415 cattatgaaaatctgagttgttttgttttctaggtcattatag 8330457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 8630001 - 8630091
Alignment:
Q  202 gattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||||||||||||||||||||||||||| | |  ||||| ||||||||||  ||||| ||| ||| |||  |||||||||||||||||||    
T  8630001 gattctactatggatttgagtcgttgaagttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaacaatgatt 8630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 288
Target Start/End: Complemental strand, 30294267 - 30294175
Alignment:
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||| |||| | ||||||||||||||||   |||||||| ||| || |||||||||| ||||||||||||| ||  ||||||||||||||||    
T  30294267 ctattttgagattttgctatggatttgagtcg---aaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaacaat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 289
Target Start/End: Original strand, 26565663 - 26565758
Alignment:
Q  194 tattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||| |||||| ||||| |||||| ||||| || ||||| |||||  |||||| |||||||||| |||||| | ||| |||||||||||||||    
T  26565663 tattttgagattctgctatgaatttgaatcgttaaaagtgaataaagttacaaaattctgaattttatgatttaaggcagaattttgacaacaatg 26565758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30294531 - 30294444
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||||||||||||||||  || |||| | |||||| |||| |||||||| | ||||| |||||||| || ||||||||||||    
T  30294531 aatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaatcacaatcaaactcgatggattttacc 30294444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 4574544 - 4574475
Alignment:
Q  215 atttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaa 284  Q
    |||||| |||||||||||||  ||||||||||||| ||| ||||||||||||| |||| |||||| ||||    
T  4574544 atttgaatcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtcatgattttcacaa 4574475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 545 - 582
Target Start/End: Original strand, 8344183 - 8344220
Alignment:
Q  545 tgaaaatctgagttgttttgttttctaggtcattatag 582  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8344183 tgaaaatctgagttgttttgttttctaggtcattatag 8344220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 8572422 - 8572336
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||||||| ||| ||| || |  || | ||||||||||||||| ||||| || |||| |||||||||||||||||||||||||    
T  8572422 aatcaaaatcgaaagatgttaatcaaggacatttgtagaattgatata-gaaattataaaattgcaatcaaaatcaatggattttacc 8572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 27509260 - 27509374
Alignment:
Q  5 aaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatac 104  Q
    ||||| |||||||||||||| || |||| | |||||| ||||||||||||  | |||||||||| ||| || || |||||||||        ||||||||    
T  27509260 aaaattgaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaataaaattcgattgattttaccaaaaaa--aataatac 27509357  T
Q  105 taaatatatgttataaa 121  Q
    |||||||||||||||||    
T  27509358 taaatatatgttataaa 27509374  T

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Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 8329867 - 8329907
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggatttt 190  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  8329867 tataagaaatcgtaaaatcgcaatcaaaatcaaaggatttt 8329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8304371 - 8304324
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatata 48  Q
    |||||||||||||||||||||||| |  |||| |||||||||||||||    
T  8304371 aatcaaaatcgaaggattttactcaaggacttttgtagaattgatata 8304324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 8346354 - 8346394
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggatttt 190  Q
    ||||||||||||||| |||||||| |||||||| |||||||    
T  8346354 tataagaaatcgtaatatcgcaatcaaaatcaaaggatttt 8346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 9685235 - 9685275
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||||| |||||||||| |||||| |||||||||    
T  9685235 tataagaaatcataaaatcgcaattaaaatcgatggatttt 9685275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 8e-81; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 4 - 289
Target Start/End: Original strand, 5361812 - 5362093
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    |||||||||||| |||||||| || |||| |||||||| |||||| |||||| | |||||||||||||| || |||||||| |||        || ||||    
T  5361812 caaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcgtaaaatcgcaatcaaagtcgatggatttgaccaaaag---aaaaata 5361908  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||| |||| ||||  ||||||||| |    
T  5361909 ctaaatatatgtta-aaaatggtatataatcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttggaa 5362007  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  5362008 ttctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatg 5362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 5 - 266
Target Start/End: Original strand, 9911259 - 9911518
Alignment:
Q  5 aaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatac 104  Q
    |||| |||||||||||||||||  |||| |||||||| ||||||||||||  | ||||||||||||||||| ||||| ||||||       |||||||||    
T  9911259 aaaaacgaaggattttactcgagaacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaa-taataatac 9911357  T
Q  105 taaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggat 204  Q
    | ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||  | ||||| ||||    
T  9911358 ttaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggat 9911456  T
Q  205 tctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattt 266  Q
    ||||||||||||||  | ||||||||||||||||||| |||||||| |||||||||||||||    
T  9911457 tctactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttgaattttaggattt 9911518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 5375950 - 5375666
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||||||||||||  ||||| |||||  | ||||| ||||||||||| ||||||||||||        | ||    
T  5375950 aatcaaaatcgaaggattttactcaaggacttctgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatggattttacccaaaaaaaatta 5375851  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||||||| ||| || ||| ||||| ||||||||     
T  5375850 atactaaatatatgttataaa-tgatatatggtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctatttta 5375752  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaaca 286  Q
      |||||| |||| |||| ||||||||||||||||||||||||||||||| | |||||||| ||||||||  ||||||||||||||    
T  5375751 aaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 99 - 289
Target Start/End: Complemental strand, 13023758 - 13023566
Alignment:
Q  99 taatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| || |||||| |||||||    
T  13023758 taatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctattt 13023660  T
Q  199 t--gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaa-ttttaggatttaggtcaggattttgacaacaatg 289  Q
    |  |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| ||  |||||||||||||||||    
T  13023659 tttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 10143185 - 10142897
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||||||||||| || || | || |||||||| ||||||||| ||  | ||||||||||||||||  |||||||||| |        ||||    
T  10143185 aatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggattttatcaaaaaaaaaata 10143086  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||| ||||||  ||||||||||||||| |||||||  ||||||||||||||||||||| |||| |||||| ||||||||| |||||||||    
T  10143085 atactaaatatatattataat-tggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttg 10142987  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    | ||| ||||||||| ||||||| ||||||||| |||||||||||||||  | |||||||| ||||| ||| ||||||| ||||||||||    
T  10142986 gaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaatga 10142897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 9770397 - 9770112
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |   ||| |||||||| ||||||  ||||  | ||||||||||||||||| ||| ||||||||        | ||    
T  9770397 aatcaaaatcgaaggattttactcaaggtcttttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaaa-atta 9770299  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    |||||||||||||||||| || |||||||||||||||  | |||||||||||||||||||||||||||||||| |||||  || |||||| ||||||||     
T  9770298 atactaaatatatgttatgaa-tggtatatagtcataagtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctatttta 9770200  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||  ||||||| ||||| |||  |||||| ||||||||    
T  9770199 ggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 36121108 - 36120823
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||| |||||||||| |  |||| ||||| || |||||| |||||  | ||||||||||||||||| ||||||||||||       |||||    
T  36121108 aatcaaaatcgaaagattttactcaaggacttttgtagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaa--taata 36121011  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||| ||| |||||   ||||||     
T  36121010 atactaaatatattttataaa-tggtatatagtcataaatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttatttta 36120912  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    | ||| || ||||||||| |||||||||||||||||||| |||||||||||| |||||||  |||||  || | |||||||||||||||    
T  36120911 gaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 100 - 289
Target Start/End: Complemental strand, 8889415 - 8889227
Alignment:
Q  100 aatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    |||||||||||||| ||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||| ||| |||||  |||||||    
T  8889415 aatactaaatatatattataaa-tggtatatagtcataaacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 8889317  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||| |||| |||||||||||||| |||||||||| || |||||||||| ||||||||||||| ||| ||||||||||| |||||    
T  8889316 gggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaatg 8889227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 4 - 287
Target Start/End: Complemental strand, 17466361 - 17466080
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    |||||| ||| |||| ||||| || |||| ||| |||| ||||||||||||  | |||| |||||||||||| |||||||||||         |||||||    
T  17466361 caaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcgatggattttacaacaaaaa-aataata 17466263  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
     ||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||  ||||| |||||||||   |||||| |||    
T  17466262 ttaaatatatgttataaa-tggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggattttgcttattttagga 17466164  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    ||||| |||||||||||||| || ||| |||||||| |||||||||||| ||||||| |||||| ||  | |||||||||||||    
T  17466163 ttctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 139 - 290
Target Start/End: Original strand, 13551602 - 13551753
Alignment:
Q  139 atgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaa 238  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||||||||| ||    
T  13551602 atgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaa 13551701  T
Q  239 agtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    |||||||||||||| ||||||||||| || |||  |||||||||||||||||    
T  13551702 agtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatga 13551753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 23064805 - 23065094
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||| ||||||||||| || |  |||| |||||||| |||||| |||||  | |||| |||||||||||| |  |||||||||       |||||    
T  23064805 aatcaaaattgaaggattttattcaaggacttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgaatgattttaccaaaaaa-taata 23064903  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgactta--gtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
    ||||||||||||||||||||| || ||||  |||||| ||||||||  ||||||||||||||||||||| |||||||||||| ||||||||   ||||||    
T  23064904 atactaaatatatgttataaa-tgatatagggtcataaatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatggatttgacctattt 23065002  T
Q  199 tgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    | | ||||||| ||||||||||||||||||| |||||||||||  |||||| ||| ||||||| ||||| ||| || |||| ||||||||||    
T  23065003 tagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactggattttagaatttaagtcggggttttaacaacaatga 23065094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 96 - 289
Target Start/End: Complemental strand, 37240448 - 37240261
Alignment:
Q  96 taataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttcta 195  Q
    ||||||||||||||||||| |||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||| |||||| ||| ||| |  |||    
T  37240448 taataatactaaatatatgatataaa-tggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattatgccta 37240350  T
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||| ||    || |||||||||||||| ||  ||||||| |||||||||    
T  37240349 ttttggg-ttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaatg 37240261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 155 - 288
Target Start/End: Original strand, 8011212 - 8011345
Alignment:
Q  155 gaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 254  Q
    ||||||| ||||||||||| |||||| ||| |||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8011212 gaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 8011311  T
Q  255 attttaggatttaggtcaggattttgacaacaat 288  Q
    ||||||||||||  ||  ||||||||||||||||    
T  8011312 attttaggatttgagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 7044821 - 7044728
Alignment:
Q  194 tattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||| ||| |||||||||||||||    
T  7044821 tattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgacaacaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 195 - 292
Target Start/End: Complemental strand, 24719610 - 24719513
Alignment:
Q  195 attttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||| | ||| |||  |||||||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatgatt 24719513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 18459733 - 18459838
Alignment:
Q  184 ggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgaca 283  Q
    |||||||  ||||||| ||||||| ||||||||||||||||||||| ||||| | |||||||||||| || ||||||||||||  ||| ||||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  284 acaatg 289  Q
    ||||||    
T  18459833 acaatg 18459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 24719860 - 24719725
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||| ||||||||||||||||||||  |||| |||||||| ||||||||||||| | ||||||||||||||||| |||  |||||||        ||||    
T  24719860 aatcacaatcgaaggattttactcgattacttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagttttaccaaagcaaaaata 24719761  T
Q  101 atactaaatatatgttataaaatggtatatagtcata 137  Q
    ||  |||||||||||||| |||| |||||||||||||    
T  24719760 atgttaaatatatgttat-aaattgtatatagtcata 24719725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 4156857 - 4156763
Alignment:
Q  194 tattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||| |||||||||||  ||||||||||||| |||||||| ||||||  |||||||| ||||||| |||||| ||| ||||||||||||||||    
T  4156857 tattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaacaat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 8010980 - 8011129
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| || | || | |||||| ||||||||||||  | ||||||||||||||||| ||| ||||||||        ||||    
T  8010980 aatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatgtattttaccaaaacaaaaata 8011079  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagttta 151  Q
    || ||||||||||||||| |||| ||||||| | ||| |||| ||||||||    
T  8011080 atgctaaatatatgttat-aaattgtatataattataaatgaattagttta 8011129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 184 - 284
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  184 ggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgaca 283  Q
    |||||||  |||||||||||||||||||||| ||||||||| | ||| |||| |||||| |||||| ||| ||||||||||||| ||| ||||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  284 a 284  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6346799 - 6346882
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattt 84  Q
    |||||||||||||||||||||||| || |||| ||||||||  |||||||||||  | ||||||||||||||||| ||||||||    
T  6346799 aatcaaaatcgaaggattttactcaactacttttgtagaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 183 - 290
Target Start/End: Original strand, 6347088 - 6347195
Alignment:
Q  183 tggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgac 282  Q
    ||||||||  |||||||| || ||  |||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||| ||  | ||||||||    
T  6347088 tggattttacctattttgagactcggctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgac 6347187  T
Q  283 aacaatga 290  Q
    || |||||    
T  6347188 aataatga 6347195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 7452499 - 7452418
Alignment:
Q  208 actatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    |||||||||| ||||||||||||||||| ||||| ||||||| ||| ||||||| ||||| ||| ||||||| ||||||||||    
T  7452499 actatggatt-gagtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcacaacaatga 7452418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7045048 - 7044961
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||||||| |||||||||| || |||| || | ||| ||||||||||||| | ||||  ||||||||||| ||||||||||||    
T  7045048 aatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttacc 7044961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 9149566 - 9149709
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcat-caaatcgcaatcaaaatcaatggattttaccnnnnnnntaat 99  Q
    ||||||||| |||||||||||||| || ||||  ||||||| ||||||||||||| |  ||| ||||||||||||  || |||||||||        |||    
T  9149566 aatcaaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaattgatagattttaccaaaagaaaaat 9149665  T
Q  100 aatactaaatatatgttataaaatggtatatagtcatagatgact 144  Q
    ||| ||||||||||||||| |||| ||||||||| ||| ||||||    
T  9149666 aatgctaaatatatgttat-aaattgtatatagttataaatgact 9149709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37240524 - 37240450
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatat-aagaaatcatcaaatcgcaatcaaaat 74  Q
    |||||||||||||||||||||||| || |||| |||||||| ||||| |||||||| | ||||| ||||||||||    
T  37240524 aatcaaaatcgaaggattttactcaactacttttgtagaatcgatataaagaaatcgtaaaatcacaatcaaaat 37240450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 215 - 288
Target Start/End: Original strand, 9149791 - 9149864
Alignment:
Q  215 atttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||| || ||||||||  | |||||||||||||||| |||||||||||||| ||| |||||||||| |||||    
T  9149791 atttgattctttgaaggtagataaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 55476273 - 55476223
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataaga 51  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||||||    
T  55476273 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataaga 55476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 4157090 - 4157053
Alignment:
Q  153 aagaaatcgtaaaatcgcaattaaaatcaatggatttt 190  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 7803110 - 7803070
Alignment:
Q  184 ggattttttctattttgggattctactatggatttgagtcg 224  Q
    ||||||| |||||||||||||||| |||||| |||||||||    
T  7803110 ggattttgtctattttgggattctgctatgggtttgagtcg 7803070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 13551613 - 13551653
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||||| |||||||||| |||||| |||||||||    
T  13551613 tataagaaatcataaaatcgcaattaaaatcgatggatttt 13551653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 18327415 - 18327339
Alignment:
Q  216 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||||||||||||| | |  |||||||||||||||| ||||||  || |||  ||  |||||||||||||||||||    
T  18327415 tttgagtcgttgaagctaagtaaagtcgcaaaatcctaaattttgagacttaattcgtgattttgacaacaatgatt 18327339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 292
Target Start/End: Original strand, 18437982 - 18438058
Alignment:
Q  216 tttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||||||||||||| | |  |||||||||||||||| ||||||  || |||  ||  |||||||||||||||||||    
T  18437982 tttgagtcgttgaagctaagtaaagtcgcaaaatcctaaattttgagacttaattcgtgattttgacaacaatgatt 18438058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 46664421 - 46664465
Alignment:
Q  223 cgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattta 267  Q
    |||||||| |||| ||||||||||||| |||||||||| ||||||    
T  46664421 cgttgaagatgaacaaagtcgcaaaattctgaattttaagattta 46664465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 5e-79; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 11879885 - 11879596
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||||||||||||   |  |||| | |||||| ||||||  ||||  | |||||||| |||||||| ||||||||||||       |||||    
T  11879885 aatcaaaatcgaaggattttacctaagaacttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaaaa-taata 11879787  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||| |||||| |||||||     
T  11879786 atactaaatatatgttataaa-tggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctatttta 11879688  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  11879687 ggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatgatt 11879596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 11897301 - 11897012
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||||||||||||   |  |||| | |||||| ||||||  ||||  | |||||||| |||||||| ||||||||||||       |||||    
T  11897301 aatcaaaatcgaaggattttacctaagaacttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaaaa-taata 11897203  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||| |||||| ||| |||||| |||||||     
T  11897202 atactaaatatatgttataaa-tggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctatttta 11897104  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  11897103 ggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatgatt 11897012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 15294954 - 15294667
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| ||||||||  |||||||||||| | ||||||||| ||||||| ||||||||||||        ||||    
T  15294954 aatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggattttacctaaaaa--aata 15294857  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||| ||| | || |||||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||||||  ||||||||    
T  15294856 atactaaatatatgttacaaa-tagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttg 15294758  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    | |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  15294757 gtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaacattgat 15294667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 15475323 - 15475036
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| ||||||||  |||||||||||| | ||||||||| ||||||| ||||||||||||        ||||    
T  15475323 aatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggattttacctaaaaa--aata 15475226  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||| ||| | || |||||||||| ||||||||||||||||||||| ||||||||||||| |||||| |||||||||  ||||||||    
T  15475225 atactaaatatatgttacaaa-tagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttg 15475127  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    | |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |||||| ||||    
T  15475126 gtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaacattgat 15475036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 5922333 - 5922048
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||| || || ||||||||||||       |  ||    
T  5922333 aatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatctaa-tcgatggattttacccaaaaaatt-ta 5922236  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    |||||||||||||||||| || ||||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||| ||||||||| |||||||||    
T  5922235 atactaaatatatgttatgaa-tggtatatagtcataaatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttg 5922137  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||||||||| | ||||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||||||    
T  5922136 ggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatg 5922048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 100 - 289
Target Start/End: Complemental strand, 31424350 - 31424162
Alignment:
Q  100 aatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    |||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||    
T  31424350 aatactaaatatatgttataat-tggtatatagtcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcctatttt 31424252  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||    
T  31424251 gggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaataatg 31424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 4 - 292
Target Start/End: Original strand, 29384159 - 29384449
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaa----t 99  Q
    ||||||||||||||||||||| || |||| ||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||        ||    |    
T  29384159 caaaatcgaaggattttactcaactacttttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaaatact 29384258  T
Q  100 aatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    |||||||||||||||||||||| ||||||||||||||| |||| ||  |||||||||||||||||||||||||| ||| || ||| |||||  |||||||    
T  29384259 aatactaaatatatgttataaa-tggtatatagtcataaatgaattgttttataagaaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttt 29384356  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||   | ||||||||||||||| ||||    
T  29384357 tggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaagattttaggatttaaacctggattttgacaacaacgatt 29384449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 17647282 - 17646993
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnn-taat 99  Q
    |||||||||||||||||||||||| || | || |||||||| ||||||||||||  | ||||||||||||||||| |||||||||| |        ||||    
T  17647282 aatcaaaatcgaaggattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaaaaaataat 17647183  T
Q  100 aatactaaatatatgttataaaatggtatatagtcataga--tgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatt 197  Q
    || | ||||||||| ||| ||| ||||||||| | | | |  |||||  |||||||||||||||| ||||  |||| |||||| ||| |||||| |||||    
T  17647182 aacattaaatatattttacaaa-tggtatataataaaaaaaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaatttttcctatt 17647084  T
Q  198 ttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||||||    
T  17647083 ttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 45403314 - 45403029
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||  |  |||| |||||||| |||||| |||||  | ||| ||||||||||||| || |||||||||       |||||    
T  45403314 aatcaaaatcgaaggattttacttaaagacttttgtagaatcgatataggaaattgtaaaa-cgcaatcaaaatcgatagattttaccaaaaaaataata 45403216  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||| ||||||||||||||||| ||||||||  ||||| ||||||| ||| ||||| ||||||||||||||||| |||||| |||||||||   |||||||    
T  45403215 atattaaatatatgttataaa-tggtatattatcataaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttg 45403117  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
     |||||| |||||||||| ||||||||||||| ||||||||||||||||| || ||||||| ||||| |||  |||||||||||||||    
T  45403116 agattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaat 45403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 19704301 - 19704583
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||| ||||| ||||||| |  |||  |||||||| |||||  |||||| | ||||| ||||||||||| ||||||||||||        || |    
T  19704301 aatcaaaatcaaaggaatttactcaaggactgttgtagaatcgatatttgaaatcttaaaatcacaatcaaaatcgatggattttacctaaaa---aaaa 19704397  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    | ||||||||||||||| ||| ||||||||||||||| || |||| ||||||||||||||||||||| ||||| |||||| |||||||||  ||||| ||    
T  19704398 aaactaaatatatgttacaaa-tggtatatagtcataaataacttggtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatg 19704496  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcc-tgaattttaggatttaggtcaggattttgacaaca 286  Q
    | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||| ||  ||||||||||||||    
T  19704497 gaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 23142454 - 23142224
Alignment:
Q  6 aaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatact 105  Q
    |||||||| ||||||| || |  |||| |||||||| ||||||||||||  | ||||||||||||||||| ||||| ||||||       ||||||||||    
T  23142454 aaatcgaatgattttagtcaaaaacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaa--taataatact 23142357  T
Q  106 aaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggatt 205  Q
    |||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||| ||| |||||  ||||||| |||||    
T  23142356 aaatatatgttataaa-tggtatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggatt 23142258  T
Q  206 ctactatggatttgagtcgttgaaggtgaagaaa 239  Q
    ||||||||||||| ||||||||||| ||||||||    
T  23142257 ctactatggatttcagtcgttgaagttgaagaaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 102 - 293
Target Start/End: Original strand, 22910146 - 22910336
Alignment:
Q  102 tactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgg 201  Q
    |||||| ||||||||||||| ||||||||||||||| || ||||| ||||||||||||| |||||||||||| ||||||||||||||||  |||||||      
T  22910146 tactaagtatatgttataaa-tggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaa 22910244  T
Q  202 gattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgattt 293  Q
    ||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||||||| ||| |||| || ||| |||||||||    
T  22910245 gattctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagtcgggatgtttacatcaatgattt 22910336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 6811101 - 6810861
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||||||| |||||| || || |||| |||||||| ||||||||||||    ||||||||||||||||| ||||||||||||        |||||||    
T  6811101 caaaatcgaagaattttaatcaactacttttgtagaatagatataagaaattga-aaatcgcaatcaaaatcgatggattttaccaaaaaa--aataata 6811005  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    |||||||||||||||||| || |||||||| ||| ||||||||||||||| ||||||||||||||| ||| |||||| ||| |||||  |||||||   |    
T  6811004 ctaaatatatgttataaa-tgatatatagttataaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgatg-attttgcctattttaaaa 6810907  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6810906 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 100 - 284
Target Start/End: Original strand, 3094185 - 3094378
Alignment:
Q  100 aatactaaatatatgttataaaatggtatatagtcatagatgacttagtttata----------agaaatcgtaaaatcgcaattaaaatcaatggattt 189  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||||          | |||||||||||||||||| |||||| ||||||||    
T  3094185 aatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatcgatggattt 3094283  T
Q  190 tttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaa 284  Q
    |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||   ||||||||||    
T  3094284 tgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 100 - 289
Target Start/End: Original strand, 27836406 - 27836594
Alignment:
Q  100 aatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| | ||| |||||  ||| |||||   ||||||    
T  27836406 aatactaaatacatgttataaa-tggtatatagtcataaatgacttagtttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttatttt 27836504  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
     | |||||||||||||||| ||| |||||||||||| |||  ||||||||||||||||||||||| || ||  | |||||||||||||||    
T  27836505 agaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttaggatctaagtttgaattttgacaacaatg 27836594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 7489127 - 7489417
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||| |||||||||||| |  |||| |||||||| ||||||  ||||  | ||||||||||||||||| ||| |||||||        || ||    
T  7489127 aatcaaaatcggaggattttactcaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttac-tcaaaaatatta 7489225  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| || |||||||||||| |||||||| ||||||||||||| |||||| ||||| |||||| ||  ||||| ||||||||     
T  7489226 atactaaatatatgttataaa-tgatatatagtcataaatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttgtctatttta 7489324  T
Q  201 ----ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
        | ||||||||| |||||| ||||||||||||||||||||   ||||||| ||| |||||| ||||||  |  |||||||||||| |||||||    
T  7489325 tttagaattctactacggattttagtcgttgaaggtgaagaaa---gcaaaattctgtattttacgatttaattggggattttgacaataatgatt 7489417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 5 - 267
Target Start/End: Complemental strand, 32424615 - 32424356
Alignment:
Q  5 aaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatac 104  Q
    |||||||||||||||||||| |  | || |||||||| || ||| |||||  | |||||||||| |||||| || ||||||| |        | ||||||    
T  32424615 aaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaattgtaaaatcgcaataaaaatcgatagattttatccagaaaa-attaatac 32424517  T
Q  105 taaatatat--gttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggg 202  Q
    |||||||||  |||||||| ||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||||| ||  ||||| |||||||| ||    
T  32424516 taaatatatatgttataaa-tggtatatagtcataaatgacttagtatataataaatcgtaaaatcgcaatcaaaatctataaattttgtctattttagg 32424418  T
Q  203 attctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattta 267  Q
    ||||||||||| |||||| ||||| |   |||| ||||||  |||||||| |||||||| |||||    
T  32424417 attctactatgaatttgaatcgttaa---tgaaaaaagtcataaaatcctaaattttagaattta 32424356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 185 - 289
Target Start/End: Original strand, 24056594 - 24056698
Alignment:
Q  185 gattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaa 284  Q
    |||||| ||||||||||||||   |||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||| |||| |||||||| ||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataa 24056693  T
Q  285 caatg 289  Q
    |||||    
T  24056694 caatg 24056698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 98 - 284
Target Start/End: Original strand, 6292282 - 6292467
Alignment:
Q  98 ataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatt 197  Q
    |||||| ||||||||| ||||||| ||||||||||| ||| ||||||||| |||||| |||| |||| | |||||| ||||||  || ||||||  ||||    
T  6292282 ataatattaaatatattttataaa-tggtatatagtgataaatgacttagattataataaattgtaagaccgcaatcaaaatcgttgaatttttcttatt 6292380  T
Q  198 ttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaa 284  Q
    || | ||| |||||||| ||||||||||| ||| |||| |||||| ||||||| | ||||||| |||||| ||| | ||||| ||||    
T  6292381 ttagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 213 - 289
Target Start/End: Original strand, 477101 - 477177
Alignment:
Q  213 ggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||| |||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 9212202 - 9212295
Alignment:
Q  105 taaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    |||||||| |||||||| |||||||| |||||| |||| ||||||||||||||||| |||||||||||| |||||| |||||||||| |||||||    
T  9212202 taaatataggttataaa-tggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttt 9212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 15761473 - 15761569
Alignment:
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||| | ||||| |||||||||||||||||| || ||| || |||||||||| | ||||||||||| |||  ||||||||||||||||    
T  15761473 ctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaacaatg 15761569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 15761207 - 15761322
Alignment:
Q  6 aaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatact 105  Q
    ||||||||||||||||||| |  |||| |||||||| |||||||||| |  | ||||||||||||||||| ||||||||||||        |||||| ||    
T  15761207 aaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggattttaccaaaacaaaaataatgct 15761306  T
Q  106 aaatatatgttataaa 121  Q
    ||||||||||||||||    
T  15761307 aaatatatgttataaa 15761322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 8582314 - 8582241
Alignment:
Q  15 gattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||| || |||| |||||||||||||||||||||| | ||||  ||||||||||| ||| ||||||||    
T  8582314 gattttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcgatgaattttacc 8582241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 9036757 - 9036801
Alignment:
Q  243 gcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||    
T  9036757 gcaaaatcctgaattttaggatttaagtcaggtttttgacaacaa 9036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 289
Target Start/End: Complemental strand, 23136396 - 23136348
Alignment:
Q  241 tcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  23136396 tcgcaaaatcctgaattttaggatttaagtcgggattttgacaataatg 23136348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17566383 - 17566313
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaa 71  Q
    |||||||||||||| ||||||||| || |||| |||||||  ||||||||||||  | |||||||||||||    
T  17566383 aatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgcaatcaa 17566313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 150 - 267
Target Start/End: Complemental strand, 15231862 - 15231745
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 249  Q
    ||||| |||| ||||||||||||| |||     ||||||||  |||||||  |||| || |||| |||| |||||||||||||||||||  |||||||||    
T  15231862 tataaaaaattgtaaaatcgcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaacatcgcaaaat 15231763  T
Q  250 cctgaattttaggattta 267  Q
    | | || |||||||||||    
T  15231762 cttaaagtttaggattta 15231745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 24056414 - 24056499
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggatttta 86  Q
    |||||||||||||||||||||||| || | || ||||||||  |||||| ||||  | |||||||||||| |||| || |||||||    
T  24056414 aatcaaaatcgaaggattttactcaactagttttgtagaatcaatataacaaatgttaaaatcgcaatcataatcgatagatttta 24056499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 22910193 - 22910233
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  22910193 tataagaaatcttaaaatcgcaatcaaaatcaatggatttt 22910233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 31424301 - 31424261
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  31424301 tataagaaatcgtaaaatcgcaatcaaaatcaatggatttt 31424261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 22910052 - 22910118
Alignment:
Q  6 aaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaa 72  Q
    |||| ||||||||||| || || | || |||||||| ||||||||||||| | ||||||||||||||    
T  22910052 aaattgaaggattttattcaactatttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaa 22910118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24414131 - 24414217
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttac 87  Q
    |||||||||||||||||||||||| |  | || |||||||| |||||| |||||  | |||||  ||||||| |||||| |||||||    
T  24414131 aatcaaaatcgaaggattttactcaagaatttttgtagaatcgatataggaaattgtaaaatcctaatcaaattcaatgaattttac 24414217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 9212246 - 9212286
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||| | ||||||||||||||||| |||||||||    
T  9212246 tataagaaatcttaaaatcgcaatcaaaatcgatggatttt 9212286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 5e-79; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 43235153 - 43234868
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| |||||||| ||||||| ||||  | ||||||||||||||||| || |||||||||       |||||    
T  43235153 aatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataaaaaattgtaaaatcgcaatcaaaatcgattgattttaccaaaaga-taata 43235055  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||| ||| ||||||||||||| |||| ||||| |||| ||||||||||| |||||||||||||||||| |||| |||||| |||||||||| |||||||     
T  43235054 atagtaagtatatgttataaa-tggtttatagacataaatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggatttttcctatttta 43234956  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  43234955 ggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 18844000 - 18843716
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||| || ||||||||| |  |||| ||||||||  ||||| |||||  | ||||||||||||||||| ||||||||||||        | ||    
T  18844000 aatcaaaatcggagtattttactcaaggacttttgtagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaa-atta 18843902  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||| ||||| |||||| ||| ||||| |||||||||    
T  18843901 atactaaatatatgttataaa-tggtatataatcataaatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctattttg 18843803  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| | ||||| |||||||    
T  18843802 ggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 19579228 - 19578941
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||||||||| |||| |  |||| |||||||| | ||||  ||||  | ||||||||||||||||| ||||||||||||        ||||    
T  19579228 aatcaaaatcgaaggatttcactcaaggacttttgtagaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaata 19579129  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    |||| ||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||||||| ||||||| |||||| |||||||||   |||||||    
T  19579128 ataccaaatatatgttatgaa-tggtaaatagtcataaatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttg 19579030  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||| ||  | |||||||||||||||    
T  19579029 ggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaatg 19578941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 4 - 289
Target Start/End: Original strand, 21059003 - 21059285
Alignment:
Q  4 caaaatcgaaggatttt-actcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataat 102  Q
    |||||||||| |||||| |||  || |||| ||||||||| ||||||||||| || ||||||||||||||||| |||||||||||         || |||    
T  21059003 caaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcgatggattttacaacaaaa--aaaaat 21059100  T
Q  103 actaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggg 202  Q
    ||||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||| |||||  |||||| |||    
T  21059101 actaaatatatgttataaa-tggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttaggg 21059199  T
Q  203 attctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||  || |||||||||||||||||    
T  21059200 attctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaatg 21059285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 23172272 - 23172560
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||| ||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||||||||| ||| ||||||||        | ||    
T  23172272 aatcaaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaaa-atta 23172370  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggat----tttttctat 196  Q
    ||| ||||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||||||||||| || |||||| || |||    ||| |||||    
T  23172371 atattaaatatatgttacaaa-tggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctat 23172469  T
Q  197 tttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||    
T  23172470 tttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 29 - 292
Target Start/End: Original strand, 18051405 - 18051663
Alignment:
Q  29 acttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatactaaatatatgttataaaatggtat 128  Q
    |||| |||||||| |||||| |||||  | ||||||||| ||||||| |||||||| |||       |||||||||||||||||||||||||| |   ||    
T  18051405 acttttgtagaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggatttaaccaaaaaa-taataatactaaatatatgttataaatt---at 18051500  T
Q  129 atagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttga 228  Q
    || |||||| ||||||||||||||||||||||||| ||||||||| |||||| |||||||||  ||||||| | |||||||||| |||||||||||||||    
T  18051501 at-gtcataaatgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttga 18051599  T
Q  229 aggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    || |||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||||||||    
T  18051600 agttgaagaaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaatgatt 18051663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 27340031 - 27340307
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnn--taa 98  Q
    ||||||||||||||||||||||||    |||| |||||||||||||||||||||  | ||||||||||||||||| || ||||||||          |||    
T  27340031 aatcaaaatcgaaggattttactcacggacttttgtagaattgatataagaaatattaaaatcgcaatcaaaatcgatagattttacaaaaaaataataa 27340130  T
Q  99 taatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
    |||||||||||||||||||  ||||||||||||||     |||||||||||||||||||||  ||||||| |||| |||||| ||| |||||  ||||||    
T  27340131 taatactaaatatatgtta-caaatggtatatagt----aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcctattt 27340225  T
Q  199 tgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttg 280  Q
    |  ||||||||||| ||||||||||||||||| ||||||||||||||||||| | ||||||| |||||| ||| ||||||||    
T  27340226 taagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 4 - 288
Target Start/End: Original strand, 38158111 - 38158383
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||||||||||||||||| || | || ||||||||  || ||||||||  | ||||| ||||||||||  ||||||||||||        |||||||    
T  38158111 caaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttaccaaaaaa--aataata 38158208  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    ||||||||||||||||          |||||||| |||| ||||||||||||||||||||||||  |||  |||||||||||||||| ||||||||||||    
T  38158209 ctaaatatatgttata----------tagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtctattttggga 38158298  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||||||| ||||||||||| |||||| || |||||||||||||||||||  ||||||||||||| ||| | ||||||||||||||    
T  38158299 ttctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 122 - 289
Target Start/End: Original strand, 22645681 - 22645849
Alignment:
Q  122 atggtatatagtcatagatgac-ttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttga 220  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||| |||||  ||||| |||   |||||||||||| |||||||||||| |    
T  22645681 atggtatatagtcataaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaa 22645780  T
Q  221 gtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
     |||||||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||    
T  22645781 atcgttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaatg 22645849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 4 - 267
Target Start/End: Original strand, 41688513 - 41688772
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||||||||||||||||  |  |||| |||||||| ||||||  ||||  | ||||||||||||||||| ||| ||||||||        |||||||    
T  41688513 caaaatcgaaggattttacttaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttaccaaaaaa--aataata 41688610  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    ||||||||||||||| || ||||||||||| ||| |||| |||||||||||||||||||||||||||||| |||||| ||| |||||   |||||| | |    
T  41688611 ctaaatatatgttatgaa-tggtatatagttataaatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaa 41688709  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattta 267  Q
    || ||||||  |||| |||||||||||||||||||| | ||||||||| |||||||||||||||    
T  41688710 ttttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatcc-gaattttaggattta 41688772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 96 - 239
Target Start/End: Complemental strand, 19979790 - 19979648
Alignment:
Q  96 taataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttcta 195  Q
    |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||   |     
T  19979790 taataataataaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgtg 19979692  T
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaa 239  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||    
T  19979691 ttttgggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 20321228 - 20320992
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||| |||||||||||||  |  |||| ||||||||  ||||| |||||  | ||||||||||||||||| ||||||||||||        | ||    
T  20321228 aatcaaaattgaaggattttactgaaggacttttgtagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccagaaaaaatta 20321129  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||| ||||||||||||||||| || ||||| |||||| ||||||||||||||||||| ||||||||||||||| ||| |  ||| ||||| |||||||||    
T  20321128 atattaaatatatgttataaa-tgatatatggtcataaatgacttagtttataagaa-tcgtaaaatcgcaatcaaagttgatgaattttatctattttg 20321031  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaa 239  Q
    | ||| |||||||||||| |||| |||||||||||||||    
T  20321030 gaattttactatggattttagtcattgaaggtgaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 20923843 - 20923718
Alignment:
Q  163 aaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 262  Q
    ||||||||||| |||||| ||||| |||  ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||    
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  263 atttaggtcaggattttgacaacaat 288  Q
    ||||| ||| ||||||||||||||||    
T  20923743 atttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 215 - 284
Target Start/End: Complemental strand, 24106714 - 24106645
Alignment:
Q  215 atttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaa 284  Q
    |||||||||||||  |||||||||||| |||||||||||||||||| ||||||  |||||||||||||||    
T  24106714 atttgagtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaaatcaggattttgacaa 24106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  214 gatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaaca 286  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||| ||||| ||  ||||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 20320990 - 20320926
Alignment:
Q  222 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaaca 286  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||  ||||||||||||||    
T  20320990 tcgttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 26021604 - 26021464
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||| |||||||||||| || |||| ||||  || ||||||||||||| | ||||| |||| |||  | ||| ||||||||       |||||    
T  26021604 aatcaaaatcgtaggattttactcaactacttgtgtaacatcgatataagaaatcgtaaaatcacaattaaa--cgatgcattttaccaaaacaataata 26021507  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgact 144  Q
    || ||||||||||||||| |||| ||||||||||||| ||||||    
T  26021506 atgctaaatatatgttat-aaattgtatatagtcataaatgact 26021464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41427704 - 41427657
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatata 48  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  41427704 aatcaaaatcgaaggattttactcgaggacttttgtagaatcgatata 41427657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 19042406 - 19042448
Alignment:
Q  147 gtttataagaaatcgtaaaatcgcaattaaaatcaatggattt 189  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  19042406 gtttataagaaatcgtaaaatcgcaatcaaaatcgatagattt 19042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19377888 - 19377838
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataaga 51  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||||||    
T  19377888 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataaga 19377838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 188
Target Start/End: Original strand, 43005747 - 43005785
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggatt 188  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  43005747 tataggaaatcgtaaaatcgcaattaaaatcgatggatt 43005785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 19979737 - 19979697
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||| | ||||||||||||||||| |||||||||    
T  19979737 tataagaaatcgtaaaatcgcaatcaaaatccatggatttt 19979697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 5e-79; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 1 - 288
Target Start/End: Complemental strand, 23528941 - 23528656
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||       |||||    
T  23528941 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaataa-taata 23528843  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||| |||||||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| | |||||| || ||||||  |||||||     
T  23528842 ataataaatatacgttataaa-tggtatatagtcataaatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattttgcctatttta 23528744  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||    
T  23528743 ggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 16125299 - 16125591
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  || | |||||||| ||||||||||||  | ||||||||||||||||| |||||  |||||       |||||    
T  16125299 aatcaaaatcgaaggattttactcaaggacatttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggacgttacccaaaaa-taata 16125397  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||  |||||||     
T  16125398 atactaaatatatgttataaa-tggtatatattcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctatttta 16125496  T
Q  201 ggattctactatggatttgagtcgttgaaggtg---aagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
     |||| ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  16125497 agattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcctgaattttaggatttaagtcaggattttgaaaataatgatt 16125591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 13100475 - 13100190
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||| ||||||||||||| |  || | |||||||| ||||||||||||| | ||||||||||||||||| ||||||||||||       |||      
T  13100475 aatcaaaatcaaaggattttactcaaggacatttgtagaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggattttacccaaaaaataa-- 13100378  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||| |||||| |||| ||||  |||||||     
T  13100377 atactaaatatatgttacaaa-tggtatatagtcataaatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggtttttgcctatttta 13100279  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||  ||||||| ||||| ||  |||||||||||| ||||    
T  13100278 ggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaataatg 13100190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 9954877 - 9955166
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttac-cnnnnnnntaat 99  Q
    ||||||||||||||||||||||   |  |||| |  |||||  ||||| |||||  | ||||||||||||| ||| ||||||||||| |       ||||    
T  9954877 aatcaaaatcgaaggattttaccaaaggacttttcaagaatccatataggaaattgtaaaatcgcaatcaagatcgatggattttacacaaaaaaataat 9954976  T
Q  100 aatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||||   ||||||    
T  9954977 aatactgaatatatgttataaa-tggtatatagtcataaatgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttatttt 9955075  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||    
T  9955076 gggattctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatga 9955166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 25146612 - 25146898
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaa-tcgcaatcaaaatcaatggattttaccnnnnnnntaat 99  Q
    |||||||||||||||||||||||| |   |||  ||||||| ||||||  ||||  | ||| |||||||||||||| ||||||||||||        | |    
T  25146612 aatcaaaatcgaaggattttactcaaggtctttcgtagaatcgatatagaaaattctaaaaatcgcaatcaaaatcgatggattttacccaaaaaa-att 25146710  T
Q  100 aatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
     |||||||||||| |||||||| || |||||||||||| || |||||||||||||||||||||||| |||||||||||||  ||| | ||| ||||||||    
T  25146711 gatactaaatatacgttataaattg-tatatagtcataaataacttagtttataagaaatcgtaaa-tcgcaattaaaattgatgtactttgtctatttt 25146808  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  25146809 gggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 59 - 291
Target Start/End: Original strand, 9327116 - 9327347
Alignment:
Q  59 aaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatactaaatatatgttataaaatggtatatagtcataga--tgacttagtttataaga 156  Q
    ||||||||||||||||| ||| ||||||||        ||||||||||||||||| ||||||| ||||||||||||| | |  |||||||||||||||||    
T  9327116 aaatcgcaatcaaaatcgatgaattttacccaaaaa--aataatactaaatatatattataaa-tggtatatagtcaaaaaaatgacttagtttataaga 9327212  T
Q  157 aatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaat 256  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||| |||    
T  9327213 aatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaat 9327312  T
Q  257 tttaggatttaggtcaggattttgacaacaatgat 291  Q
    ||||||||||| ||||||||||| |||||||||||    
T  9327313 tttaggatttaagtcaggattttaacaacaatgat 9327347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 9351907 - 9352193
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||| |||||||||  | |  |||| ||||||||  ||||| |||||  | ||||| ||||||||||| ||| ||||||||        | ||    
T  9351907 aatcaaaatcgtaggattttatccaaggacttttgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatgaattttacccaaaaaa-atta 9352005  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| |||||||||||| |||||| | ||||||| |||||||||    
T  9352006 atactaaatatatgttataaa-tggtatatagtcaaaaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctattttg 9352104  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||| ||| |||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||    
T  9352105 ggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaatg 9352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 3 - 289
Target Start/End: Original strand, 18304657 - 18304941
Alignment:
Q  3 tcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataat 102  Q
    |||||||||||||||||||||  |  |||| |||||||| |||||| |||||  | ||||||||||||||||| |||||||||| |        | ||||    
T  18304657 tcaaaatcgaaggattttactaaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaaaaa-attaat 18304755  T
Q  103 actaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggg 202  Q
    |||||||||| ||||| || ||||||||||||||| ||||||||| ||||||||||||||||| ||||||| |||||  ||||||||| ||||||||| |    
T  18304756 actaaatatacgttatgaa-tggtatatagtcataaatgacttagcttataagaaatcgtaaa-tcgcaatcaaaattgatggattttgtctattttgag 18304853  T
Q  203 attctactatggatttgagtcgtt-gaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| ||  |||||||||||||||||    
T  18304854 attctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 21846118 - 21846401
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| |||||||| ||||||||||||  | ||||||||||||||||  ||| ||||||||        | ||    
T  21846118 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatagatgaattttacccaaaaaa-atta 21846216  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| |  |||||||| ||| |||||   |||||| | ||||   ||||||||||| |||||| |||||||||||||||||||    
T  21846217 atactaaatatatgttataaatta-tatatagttataaatgac---gtttatgaaaaat---aaaatcgcaatcaaaatcgatggattttttctattttg 21846309  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  || ||||||||||||||||||||    
T  21846310 agattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcgggattttgacaacaatgatt 21846401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 34 - 288
Target Start/End: Original strand, 13276143 - 13276395
Alignment:
Q  34 tgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatactaaatatatgttataaaatggtatatagt 133  Q
    |||||||| ||||||||||||  | |||| |||||||||||| ||||| | ||||       |||||||||||||||||||||||||| || ||||||||    
T  13276143 tgtagaatcgatataagaaattgtaaaattgcaatcaaaatcgatggactataccaaaaaa-taataatactaaatatatgttataaa-tgatatatagt 13276240  T
Q  134 catagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtg 233  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||| || ||||||  ||||||| ||||||||||||||||||  |||||||||| ||    
T  13276241 cataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttaggattctactatggatttaggtcgttgaagatg 13276340  T
Q  234 aagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||||||||||||||  |||||||||||||  || ||||||||||||||||    
T  13276341 aagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 19009792 - 19010073
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||| ||||||||||||| |  |||| |||| ||| |||||| |||||  | |||||||||||||||||| |||||||||||        || |    
T  19009792 aatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatataggaaattgtaaaatcgcaatcaaaatcattggattttaccccaaaaaaaa-a 19009890  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||| |||||||  |||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||||| |||||||||   ||||||     
T  19009891 atattaaatat--gttataaa-tggtatatagttataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttatttta 19009987  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaaca 286  Q
    | ||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  19009988 gaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 98 - 287
Target Start/End: Original strand, 42180005 - 42180193
Alignment:
Q  98 ataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatt 197  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||| ||| |||||  |||||    
T  42180005 ataatactatatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctatt 42180103  T
Q  198 ttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    |||  |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||    
T  42180104 ttgaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 286
Target Start/End: Complemental strand, 12513553 - 12513283
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||| ||||||||||||| || |||||||||||       ||||||||  | ||||||||||||||||| || |||||||||         ||||||    
T  12513553 caaaatcaaaggattttactcaactacttctgtaga-------taagaaattgtaaaatcgcaatcaaaatcgatagattttaccaaaaaat--ataata 12513463  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
     |||||||  |||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||| |||||| |||||||||   ||||||  ||    
T  12513462 ttaaatat--gttatata-tggtatatagtcgtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatga 12513366  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaaca 286  Q
    || |||||||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||| ||| ||||||||||||||    
T  12513365 ttttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 96 - 288
Target Start/End: Original strand, 9128778 - 9128969
Alignment:
Q  96 taataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttcta 195  Q
    ||||||||||||| |||||||||||| ||||||||||||| | || ||||||||||||||||||||| |||||||||| |||||| ||| ||||| ||||    
T  9128778 taataatactaaagatatgttataaa-tggtatatagtcaaaaataacttagtttataagaaatcgtcaaatcgcaatcaaaatcgatgaattttgtcta 9128876  T
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||||  |||||||||||  |||||||||||| || |||||||||||||||| ||||| | |||||||||||| |||  |||||| ||||||||    
T  9128877 ttttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 47786140 - 47785958
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||||||||  |||||| ||| |||||| ||||||||||||        |||||||    
T  47786140 caaaatcgaaggattttactcaactacttttgtagaattgatataagaaatcacaaaatcgaaataaaaatcgatggattttaccacaaaa--aataata 47786043  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattt 189  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| | ||||||||    
T  47786042 ctaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaattgcaatcaaaaccgatggattt 47785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 150 - 290
Target Start/End: Original strand, 41032661 - 41032801
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 249  Q
    |||||||||| |||||||||||||||||||| |||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||    
T  41032661 tataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaat 41032760  T
Q  250 cctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    |||||||| || |||||| |||  |||||||||||||||||    
T  41032761 cctgaattctacgatttaagtcgagattttgacaacaatga 41032801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 17869594 - 17869873
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||| ||||||||||||| |  |||| | ||||||  || ||| ||||  | ||||||||||||||||| ||| ||||||||       |||||    
T  17869594 aatcaaaatcaaaggattttactcaaggacttttatagaatcaatgtaaaaaattgtaaaatcgcaatcaaaatcgatgaattttaccaaaaaa-taata 17869692  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    |||||||||||||||| |||| | |||||| || ||| | ||||||||||| ||||||||||||||| ||||| |||||| | | |||||  |||||||     
T  17869693 atactaaatatatgttgtaaa-tagtatatggttataaaagacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaattttgcctatttta 17869791  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    |||||||||| |||||||  ||||| |||||||||||||||||||||||||     |||| |||||| |||||||||||||||||||    
T  17869792 ggattctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcc-----tttaagatttaagtcaggattttgacaacaa 17869873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 32881600 - 32881416
Alignment:
Q  6 aaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatact 105  Q
    ||||||||||||||||||| || || | |||||||| ||||||||||||  | |||||||||||||||||||||| ||||||         || ||||||    
T  32881600 aaatcgaaggattttactcaactacgtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcaatggcttttaca--------aaaaatact 32881509  T
Q  106 aaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    |||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||| |||||| ||| |||||  |||||||    
T  32881508 aaatatatgttataaa-tggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 32881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 17055995 - 17056131
Alignment:
Q  155 gaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 254  Q
    ||||||||||||||||||| |||||| |||||||||   ||||||   |||||||||||||| |||||||||||||||| ||||| | |||||||||||     
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgg 17056094  T
Q  255 attttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||||||||||||  ||||||||||||| ||||||||    
T  17056095 attttaggatttaaatcaggattttgactacaatgat 17056131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 213 - 288
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  213 ggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 184 - 290
Target Start/End: Original strand, 18337547 - 18337652
Alignment:
Q  184 ggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgaca 283  Q
    |||||||  |||||||||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | || ||| |||||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttagg-tataagtcgggattttgaca 18337645  T
Q  284 acaatga 290  Q
    |||||||    
T  18337646 acaatga 18337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 193 - 288
Target Start/End: Original strand, 14074404 - 14074499
Alignment:
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||  ||||||||| ||||||||||||||||||  |||||||||||||||||||||  ||||||||||||| | | ||||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16434794 - 16434709
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||  ||||||||||||||||| ||||||| ||||    
T  16434794 aatcaaaatcgaaggattttactcgacaacttttgtagaattgatataagataaca--aaatcgcaatcaaaatcgatggattctacc 16434709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 107 - 211
Target Start/End: Complemental strand, 18228380 - 18228278
Alignment:
Q  107 aatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattc 206  Q
    ||||||||||||||| ||||||||||||||| || ||||| ||||||||||||| ||||||| |||| |||||  |||||||||  ||||||||||||||    
T  18228380 aatatatgttataaa-tggtatatagtcataaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattc 18228283  T
Q  207 tacta 211  Q
    |||||    
T  18228282 tacta 18228278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 12800623 - 12800710
Alignment:
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||||| |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||||||| ||  ||||||| ||||||||    
T  12800623 ggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 17055763 - 17055850
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||||||||||||||||| || |||| |||||||| |||| |||||||  | |||| |||||||||||  ||||||||||||    
T  17055763 aatcaaaatcgaaggattttactcaactacttttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggattttacc 17055850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 289
Target Start/End: Original strand, 34478833 - 34478900
Alignment:
Q  222 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||||||||||| ||||||||  ||||||| |||||| ||| ||||||| |||||||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaatg 34478900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 41032621 - 41032701
Alignment:
Q  5 aaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    |||||||||| ||||||||| || | || |||||||| ||||||||||||  | |||||||||| |||||| |||||||||    
T  41032621 aaaatcgaagaattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaattaaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 47785837 - 47785790
Alignment:
Q  243 gcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  47785837 gcaaaatcctgaattttaggatttatgttgggattttgacaacaatga 47785790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14074327 - 14074397
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaa 71  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||| |||||  | |||||||||||||    
T  14074327 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaa 14074397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 8772796 - 8772715
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggatt 277  Q
    |||||||| ||| |||||||||||||| ||||||| |  | ||||||||||||| ||| ||||| ||||||| ||| |||||    
T  8772796 ttttgggactctgctatggatttgagttgttgaagctacacaaagtcgcaaaattctggattttgggatttaagtcgggatt 8772715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 24117099 - 24117006
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||| |||  |||||| |||||||||||||| ||||| | |||||| | |||||||| |||||  |  | |||||||||||||||    
T  24117099 ttttgggattctaatataaatttgaatcgttgaaggtgaataaagttgtaaaatcttaaattttagaatttaaattggaattttgacaacaatg 24117006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 202 - 285
Target Start/End: Original strand, 27917495 - 27917578
Alignment:
Q  202 gattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaac 285  Q
    |||||| ||||| ||||| || ||||||||| || ||| ||||||||||||  |||| || ||||| ||| |||||||||||||    
T  27917495 gattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgacaac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 30619223 - 30619156
Alignment:
Q  5 aaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaa 72  Q
    |||||||||||||||||||| || |||| |||||||| ||||| | ||||  | ||||||||||||||    
T  30619223 aaaatcgaaggattttactcaactacttttgtagaatcgatatgaaaaattgtaaaatcgcaatcaaa 30619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 27502239 - 27502273
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaag 230  Q
    |||||||||||| ||||||||||||||||||||||    
T  27502239 ttttgggattctgctatggatttgagtcgttgaag 27502273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 9128831 - 9128871
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||| ||||||||||||||||||| ||| |||||    
T  9128831 tataagaaatcgtcaaatcgcaatcaaaatcgatgaatttt 9128871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 9327206 - 9327246
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||| | ||||||||||||||||| |||||||||    
T  9327206 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9327246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 147; Significance: 3e-77; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 8726 - 8439
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||| |||||||||||||| |  | ||  ||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||        ||||    
T  8726 aatcaaaattgaaggattttactcaagtattttcgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaa---aata 8630  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||    
T  8629 atactaaatatatggtataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttg 8531  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||  ||||||||||||||||||||    
T  8530 ggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaacaatgatt 8439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 8e-75; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 15527954 - 15528239
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||| ||||| ||||||||  ||       |  ||    
T  15527954 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaatcgatggatttcccccaaaaaatt-ta 15528052  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||     
T  15528053 atactaaatatatgttataaa-tggtatatagttataaatgacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctatttta 15528151  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
     |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  15528152 agattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 4 - 289
Target Start/End: Complemental strand, 23898092 - 23897810
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||||||||||||||||| || |||| |||||||| ||||||||||||  | ||||| ||||||||||| ||||||||||||        || ||||    
T  23898092 caaaatcgaaggattttactcaactactt-tgtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggattttaccaaaaaaaaaa-aata 23897995  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||   ||||||| | |    
T  23897994 ctaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaa 23897896  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||| ||  ||||||||    
T  23897895 ttttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagtcgggatcttatcaacaatg 23897810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 4 - 289
Target Start/End: Original strand, 30912253 - 30912542
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttac-----cnnnnnnntaa 98  Q
    |||||| ||||||||||| || || |||| |||| ||| |||||||||||||||  ||||||||||| |||| |||||||||||     |        ||    
T  30912253 caaaattgaaggattttattcaactacttttgtaaaatcgatataagaaatcatagaatcgcaatcataatcgatggattttacttttaccacaaaaaaa 30912352  T
Q  99 taatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
    ||||||||||||||||| ||||| || |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||  ||||||    
T  30912353 taatactaaatatatgtgataaa-tgatatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattttgcctattt 30912451  T
Q  199 tgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||||||||    
T  30912452 tgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 17543574 - 17543872
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnn----- 95  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||  |||||  | ||||||||||||||||| ||||||||||||                
T  17543574 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaataaaaaa 17543673  T
Q  96 ----taataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttt 191  Q
        |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||||||||||| |||||| || ||||||     
T  17543674 aaaataataatactaaatatatgttataaa-tggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattttg 17543772  T
Q  192 tctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
      ||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||  ||||||||||||||||||    
T  17543773 cttattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaatgat 17543872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 26053140 - 26053425
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||| |||||||||| |  |||| |||||||| |||||  |||||  | ||||||||||||||||| ||||||||||||       |||||    
T  26053140 aatcaaaatcgaatgattttactcaatgacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaa-taata 26053238  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||| ||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||  |||| |||||  |||||||||   |||||||    
T  26053239 atactaactatatgttataaa-tggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttg 26053337  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||||||  |||||| |||||| ||| ||||||||||||||||    
T  26053338 ggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 26073193 - 26073478
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||| |||||||||| |  |||| |||||||| |||||  |||||  | ||||||||||||||||| ||||||||||||       |||||    
T  26073193 aatcaaaatcgaatgattttactcaatgacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaa-taata 26073291  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||| ||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||  |||| |||||  |||||||||   |||||||    
T  26073292 atactaactatatgttataaa-tggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttg 26073390  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||||||  |||||| |||||| ||| ||||||||||||||||    
T  26073391 ggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 7223800 - 7223518
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||| |||||  | |||||||||||| |||||||||||||||||        ||||    
T  7223800 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcagaatcaatggattttaccaaacaa--aata 7223703  T
Q  101 atactaaat----atatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctat 196  Q
    |||||||||    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||   |||    
T  7223702 atactaaattaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttat 7223604  T
Q  197 tttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||| |||||||||||||||| ||       |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  7223603 tttggaattctactatggatttaag-------aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 62 - 288
Target Start/End: Complemental strand, 17250280 - 17250057
Alignment:
Q  62 tcgcaatcaaaatcaatggattttaccnnnnnnntaataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcg 161  Q
    |||||||||||||||||||||||||||        |||| || ||||||||| ||||||| |  |||||||||||| |||||||||||||||||||||||    
T  17250280 tcgcaatcaaaatcaatggattttaccaaaaaac-aatagtaataaatatatattataaatt--tatatagtcataaatgacttagtttataagaaatcg 17250184  T
Q  162 taaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttag 261  Q
    |||||||||||| |||||||||| |||||  |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  17250183 taaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctggattttag 17250084  T
Q  262 gatttaggtcaggattttgacaacaat 288  Q
    |||||| ||| ||||||| ||||||||    
T  17250083 gatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 19748618 - 19748332
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||       |||||    
T  19748618 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccagaaaa-taata 19748520  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||| ||||||| || ||||||||| || |||||||||||||||||||||||||||||| |||| |||||| ||| |||||  |||||||     
T  19748519 atactaaatatattttataaa-tgatatatagtcttaaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcctatttta 19748421  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
     |||||||||| ||||||||||| || |||||||||||| || |||||||||| ||| || |||||| ||| ||||||||| |||||||    
T  19748420 agattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctggattgtaagatttaagtcgggattttgaaaacaatg 19748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 17103480 - 17103198
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||| | ||||||||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||        | ||    
T  17103480 aatcaataccgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacctaaaaaa-atta 17103382  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||| ||||||||||| ||||| || ||||||||| || || |||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||    
T  17103381 ataataaatatatgtcataaa-tgatatatagtcgtaaataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttg 17103283  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||||||||||| ||||||||||||||| ||       ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  17103282 ggattctactatgcatttgagtcgttgaaagt-------gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaatgatt 17103198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 21354928 - 21354786
Alignment:
Q  99 taatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||||| |||| | ||||||||| |||||||    
T  21354928 taatactaaatatatgttataaa-tggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattttgtctattt 21354830  T
Q  199 tgggattctactatggatttgagtcgttgaaggtgaagaaagtc 242  Q
    ||||||||||| |||||||| ||||||||||||| |||||||||    
T  21354829 tgggattctaccatggatttaagtcgttgaaggtaaagaaagtc 21354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 23 - 289
Target Start/End: Original strand, 10508883 - 10509153
Alignment:
Q  23 tcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatactaaatatatgttataaaa 122  Q
    ||||| |||| |||||||| ||||||||||||  | ||||||||||||||||  |||||||||| |       |||||||| |||||||||||||||||     
T  10508883 tcgactacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggattttatcaaaataataataataataaatatatgttataaat 10508982  T
Q  123 t-----ggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatt 217  Q
          |||||||||| ||| |||||||||||||||| || ||||||||||| ||| |||||| ||| |||||  ||||||||||||||||||||  |||    
T  10508983 gacttaggtatatagt-ataaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatt 10509081  T
Q  218 tgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||| ||||| |||||||||||| |||| | ||||||||||||||||| ||| |||||||||||| ||||    
T  10509082 tgagtcattgaatgtgaagaaagtcacaaatttctgaattttaggatttaagtctggattttgacaataatg 10509153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 122 - 266
Target Start/End: Original strand, 22498848 - 22498992
Alignment:
Q  122 atggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgag 221  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||| |||||||||||||||    
T  22498848 atggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgag 22498947  T
Q  222 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattt 266  Q
    ||||| ||||||||||||||||||||||  || | ||||||||||    
T  22498948 tcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattt 22498992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 163 - 290
Target Start/End: Original strand, 6943464 - 6943591
Alignment:
Q  163 aaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 262  Q
    ||||||||||| |||||| ||| ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  263 atttaggtcaggattttgacaacaatga 290  Q
    ||||| ||| ||||||||||||||||||    
T  6943564 atttaagtcgggattttgacaacaatga 6943591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 27233268 - 27233407
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 249  Q
    ||||||||||| |||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  27233268 tataagaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaat 27233367  T
Q  250 cctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||| ||||||||||||| ||| | | |||||||||||||    
T  27233368 cctggattttaggatttaagtcggtagtttgacaacaatg 27233407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 120 - 289
Target Start/End: Original strand, 11327532 - 11327701
Alignment:
Q  120 aaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttg 219  Q
    |||||||||| ||||||| |||| |||||| |||||||| ||||||||||||||||||||| ||| |||||  ||||||||||||||||||||||||||     
T  11327532 aaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggattta 11327631  T
Q  220 agtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||| |||||| ||||||||  ||||||| | || |||||||| |||| ||| |||||||||||||||||    
T  11327632 agtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 120 - 288
Target Start/End: Original strand, 7918342 - 7918510
Alignment:
Q  120 aaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttg 219  Q
    ||||| |||||||||||| |||||||| ||||||| |||||| |||||| |||| |||||| || ||||||   ||| || ||||| ||||||||||||     
T  7918342 aaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatggattta 7918441  T
Q  220 agtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  7918442 agtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 129 - 285
Target Start/End: Original strand, 2912218 - 2912373
Alignment:
Q  129 atagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttga 228  Q
    ||||||||| ||||||| |||||||| |||||||||||| ||||| |||||| ||| |||||   ||||||  |||||||||||| |||||| |||||||    
T  2912218 atagtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactatg-atttgaatcgttga 2912316  T
Q  229 aggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaac 285  Q
    || || ||||||| |||||||||| ||||||| |||||| ||| |||||||||||||    
T  2912317 agatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 18491074 - 18491167
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||  ||||||| ||| ||||||||||||| ||| ||||||||||| |||||    
T  18491074 ttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacagcaatg 18491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 209 - 289
Target Start/End: Original strand, 5422798 - 5422878
Alignment:
Q  209 ctatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||| |||||||||||||||||||||| ||||| |||||||| |||||||||| ||||| ||| |||||||||||||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatg 5422878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 7918194 - 7918343
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||| ||||||||| |  |||| ||||||||  ||||| |||||  | ||||||||||||||||| ||||||||||||        ||||    
T  7918194 aatcaaaatcgaagaattttactcaaggacttttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaa---aata 7918290  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataa 154  Q
    ||||||||| |||||||| ||||| |||||||||||| |||||||| |||||||    
T  7918291 atactaaatttatgttat-aaatgatatatagtcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 193 - 267
Target Start/End: Original strand, 4841953 - 4842025
Alignment:
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattta 267  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  4841953 ctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatcc--aattttaggattta 4842025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  211 atggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaaca 286  Q
    |||||||||||||||||||||||||||||||||| |||| ||| ||||||| ||||| ||| | ||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4841673 - 4841760
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||| ||||||||||||| || |||| |||||||| |  |||||||||| | ||||||||||||||||| ||| ||||||||    
T  4841673 aatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtattttacc 4841760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2912105 - 2912191
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttac 87  Q
    |||| |||| |||||||||||||| || |||| |||||||||| ||||||||||  | ||||||||||||||||| | |||||||||    
T  2912105 aatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaattgtaaaatcgcaatcaaaatcgacggattttac 2912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 11327406 - 11327493
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||||||| ||||||||| |  |||| |||||||| |||||| |||||  | ||||||||| ||||||| ||||||||||||    
T  11327406 aatcaaaatcgaagaattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttacc 11327493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22498284 - 22498371
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||| ||| |||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||    
T  22498284 aatcaaaattgaacgattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 22498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 211 - 289
Target Start/End: Original strand, 10958239 - 10958317
Alignment:
Q  211 atggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||| || ||||||||||   ||||||||||||||||||||||  |||||| |||  ||||||||||||||||    
T  10958239 atggatttgaatccttgaaggtgagtcaagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaatg 10958317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 12245213 - 12245108
Alignment:
Q  184 ggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgaca 283  Q
    ||||||| ||| |||||||||| | | |||||||| | ||  |||| ||||| ||||||||||||| |||||||||| ||||||  ||| |||||| |||    
T  12245213 ggattttatctgttttgggattttgcaatggatttaaatccatgaaagtgaataaagtcgcaaaatactgaattttaagatttaaatcatgattttaaca 12245114  T
Q  284 acaatg 289  Q
    ||||||    
T  12245113 acaatg 12245108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 18490998 - 18491063
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttag 261  Q
    |||| ||||||| ||||||||||||||| ||||||||||| ||||| ||||||| ||| |||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttag 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 285
Target Start/End: Complemental strand, 27890225 - 27890137
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaac 285  Q
    ||||||||||||  ||||||||||||||||| ||| |  | |||||||||||| |||||||||| ||| ||| |||| ||||||||||||    
T  27890225 ttttgggattctgatatggatttgagtcgttaaagctacacaaagtcgcaaaaacctgaattttgggacttaagtca-gattttgacaac 27890137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3573744 - 3573831
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||||| |||| ||||||| || |||  |||||||| ||||||||||||  | ||||||||||||||||| |||  |||||||    
T  3573744 aatcaaaatcgtaggaatttactcaactactcttgtagaatagatataagaaattgtaaaatcgcaatcaaaatcgatgagttttacc 3573831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 18490922 - 18490987
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttag 261  Q
    |||||||||| | |||||| ||| |||||||||||||||| ||||| ||||||| ||| |||||||    
T  18490922 ttttgggattatgctatgggtttcagtcgttgaaggtgaataaagttgcaaaatgctggattttag 18490987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 27233267 - 27233308
Alignment:
Q  44 atataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  27233267 atataagaaatcataaaatcgcaatcaaaatcgatggatttt 27233308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 196 - 285
Target Start/End: Original strand, 33583766 - 33583855
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaac 285  Q
    ||||||| |||| |||||||||||||||||||||| | |  ||||||  ||||||||| ||||| ||| ||| |||  ||||||||||||    
T  33583766 ttttgggtttctgctatggatttgagtcgttgaagctaattaaagtctaaaaatcctggattttgggacttaagtcgcgattttgacaac 33583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 8285760 - 8285827
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagga 263  Q
    |||||||||| | || ||||||||||||||||||| |  |  |||||||||||||||| |||||||||    
T  8285760 ttttgggattttgctgtggatttgagtcgttgaagctagatcaagtcgcaaaatcctggattttagga 8285827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 27614594 - 27614651
Alignment:
Q  110 atatgttataaaatggtatatagtcatagatgactta--gtttataagaaatcgtaaaa 166  Q
    |||||||||||| ||||||||||||||| |||| |||  ||||||||||||||||||||    
T  27614594 atatgttataaa-tggtatatagtcataaatgaattatagtttataagaaatcgtaaaa 27614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 7359916 - 7359871
Alignment:
Q  220 agtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatt 265  Q
    |||||||||||||||| |||||||| ||||| | ||||||||||||    
T  7359916 agtcgttgaaggtgaataaagtcgctaaatcttaaattttaggatt 7359871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 281
Target Start/End: Original strand, 8545030 - 8545087
Alignment:
Q  224 gttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttga 281  Q
    |||||| ||||  |||||||||||||||| ||||||||||||||  || |||||||||    
T  8545030 gttgaaagtgagtaaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 17250195 - 17250155
Alignment:
Q  45 tataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||| | ||||||||||||||||||||| |||||    
T  17250195 tataagaaatcgtaaaatcgcaatcaaaatcaatgaatttt 17250155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 2e-72; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 31237820 - 31238110
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||| ||||||||||||||||| |  |||| |||| ||| ||||||  ||||  | |||| |||||||||||| ||||||||||||       |||||    
T  31237820 aatcaatatcgaaggattttactcaaggacttttgtaaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttaccaaaaaa-taata 31237918  T
Q  101 atac-taaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
    |||| | ||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  31237919 atacatgaatatatgttataaa-tggtatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttttcctatttt 31238017  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
      |||||||||||| ||||||||||||||||||||||||||| ||||||||||  ||||||||||||| ||| ||||||||||||||||||||    
T  31238018 aagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaatgatt 31238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 5 - 287
Target Start/End: Original strand, 35565802 - 35566082
Alignment:
Q  5 aaaatcgaaggatttta---ctcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataa 101  Q
    |||||||||||||||||   ||| || |||| |||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||        || ||    
T  35565802 aaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaatcataaaatcacaatcaaaatcgatggattttaccaaaa----aaaaa 35565897  T
Q  102 tactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgg 201  Q
    |||||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||| |||||||||  |||||||||    
T  35565898 tactaaatatatgttataaattg-tatatagtcataaatgactttgtttataagaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttgg 35565996  T
Q  202 gattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    |||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||  |||||| ||  |||||||||||||||    
T  35565997 gattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 4 - 289
Target Start/End: Original strand, 15588702 - 15588979
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||||||||||||||||| |  ||||| |||| || |||||||||||| || ||||||||||||||||| ||||||||||||        |||||||    
T  15588702 caaaatcgaaggattttactcaattacttc-gtaggatcgatataagaaattataaaatcgcaatcaaaatcgatggattttaccaaaaa---aataata 15588797  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    ||||||||||| ||   ||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| |||| | || |||||| ||||||||| ||    
T  15588798 ctaaatatatgata---aatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgaga 15588894  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| || ||| ||| ||||||||||| |||||    
T  15588895 ttctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaatg 15588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 1405068 - 1404779
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||| |||||  | |||| |||||||||||| |||||||| |         |||||    
T  1405068 aatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgatggatttaaa-aaaataataata 1404970  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
     | |||| ||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||||||| |||| |||||| |||||||||   || |||     
T  1404969 ttcctaagtatatgttataaa-tggtgtatagtcataaatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggattttgcatagttta 1404871  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||||||| |||||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  1404870 ggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaatgatt 1404779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 120 - 290
Target Start/End: Complemental strand, 30432587 - 30432417
Alignment:
Q  120 aaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttg 219  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||| ||||||||||||||||||    
T  30432587 aaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatggatttg 30432488  T
Q  220 agtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    |||||||||||| ||||||||||| ||||||||  ||||||| |||||  |||||||||||||||||||||    
T  30432487 agtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaatga 30432417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 36430133 - 36429846
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||||||| |||||| |  | || |||||||| |||| || |||   | |||| |||||||||||| ||||||||||||        || |    
T  36430133 aatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcgatggattttacctaaaaaaaaa-a 36430035  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||| ||| || |||||||||||| || |||||||||||||||||||||| ||||||||| |||||| |||||||||  ||||||||    
T  36430034 atactaaatatatgttagaaa-tgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttg 36429936  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
     |||||| ||||| | ||||||||||||||||||||||||||||||||||||  ||| ||||||||| ||  ||||||||||||||||||    
T  36429935 agattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaatga 36429846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 97 - 286
Target Start/End: Complemental strand, 31578194 - 31578007
Alignment:
Q  97 aataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctat 196  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||| ||||| |||||  |||||||||   |||    
T  31578194 aataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataataaatcgtaaaattgcaatcaaaattgatggattttgcttat 31578096  T
Q  197 tttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaaca 286  Q
    ||| ||||||||||| |||||| | |||||||||||||||||| |||||||||| | |||||||  ||||| ||| ||||||||||||||    
T  31578095 tttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 20064008 - 20063713
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc-------nnnnn 93  Q
    |||||||||||||| ||||||||| |  |||| |||||||| |||||| |||||  | ||||||||| ||||||| ||||||||||||                
T  20064008 aatcaaaatcgaagaattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttaccaaaaaaaataaa 20063909  T
Q  94 nntaataat-actaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggatttttt 192  Q
       |||||| | |||||| |||| || |||||||||| ||||||| |||| |||||| |||||||| ||||||||||||||||||||| ||| |||||      
T  20063908 ataaataataaataaatacatgtgat-aaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgc 20063810  T
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||  ||||||| | || |||||||| |||| ||| |||||||||||||||||    
T  20063809 ctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 159 - 289
Target Start/End: Original strand, 23863321 - 23863451
Alignment:
Q  159 tcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattt 258  Q
    ||||||||||||||  |||||| |||||||||  |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||  ||||    
T  23863321 tcgtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattt 23863420  T
Q  259 taggatttaggtcaggattttgacaacaatg 289  Q
    ||| ||||| ||| |||||||||||||||||    
T  23863421 tagaatttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 1690575 - 1690774
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||| ||||||| ||||||  || |||| |||  ||| |||||||||| || | ||||||||||||||||| ||  ||||||||       ||||||||    
T  1690575 caaaagcgaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaatcgataaattttaccaaaaaa-taataata 1690673  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
     ||||||||| ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| |||   |||||||||||    
T  1690674 ttaaatatattttataaa-tggtatatagtcataaaagacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgggtttcgcctattttggga 1690772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 155 - 286
Target Start/End: Original strand, 25539222 - 25539353
Alignment:
Q  155 gaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 254  Q
    |||||||| |||||||| | |||||| |||||||||   |||||| ||||||| |||||||||| |||||||||||||||||||| | ||||| || |||    
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttga 25539321  T
Q  255 attttaggatttaggtcaggattttgacaaca 286  Q
    |||||||||||||  || ||||||| ||||||    
T  25539322 attttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 19491982 - 19491855
Alignment:
Q  162 taaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattt--t 259  Q
    |||||||||||| |||||| |||||||||  ||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||  ||||  |    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctattttgg-attctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttat 19491884  T
Q  260 aggatttaggtcaggattttgacaacaat 288  Q
    ||||||||  ||  |||||||||||||||    
T  19491883 aggatttaattcgagattttgacaacaat 19491855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 1690796 - 1690892
Alignment:
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||||||| ||||||||| ||||||| |||||| ||| |  ||||||||||||||    
T  1690796 ctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttgacaacaatg 1690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 193 - 289
Target Start/End: Original strand, 5395682 - 5395778
Alignment:
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||| |||||| ||||||||||||||| || ||| |||| ||||||||||||||||  |||||| |||||||||||  |||||||||||||||    
T  5395682 ctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaacaatg 5395778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 183 - 291
Target Start/End: Complemental strand, 15266187 - 15266079
Alignment:
Q  183 tggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgac 282  Q
    ||||||||| ||||||||| ||| ||  |||||||||| || |||||| |||| |||||  ||||||||||||||||||||||||  ||| |||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  283 aacaatgat 291  Q
    |||||||||    
T  15266087 aacaatgat 15266079  T

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Target: chr2; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 16766804 - 16766710
Alignment:
Q  194 tattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||| ||||||| |||||||||||| |||||||||||||| ||| ||| |||||||| ||||||| |||||| ||||  ||||||||||||||    
T  16766804 tattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 16767070 - 16766922
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||| |||||||||||||| || |||| | |||||| ||||||||||||| | ||||||||||||||||||| ||| ||||||        ||||    
T  16767070 aatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatcaaagga-tttaccaaaacaaaaata 16766972  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagttta 151  Q
    || |||||||| |||||| |||| ||||| ||||||| |||||| ||||||    
T  16766971 atgctaaatatttgttat-aaattgtatacagtcataaatgactcagttta 16766922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 34841648 - 34841584
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaatttta 260  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  34841648 ttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaatttta 34841584  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 13502517 - 13502637
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||| ||||||| ||| || || | || ||||||||  |||||||||||| | ||||||||||||||||| ||||||||||||        ||||    
T  13502517 aatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaacaaaaata 13502616  T
Q  101 atactaaatatatgttataaa 121  Q
    ||| |||||||||||||||||    
T  13502617 atattaaatatatgttataaa 13502637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 31023318 - 31023259
Alignment:
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcct 252  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||||||    
T  31023318 ctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 19262160 - 19262279
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||| |||||||||| |  |||| |||||||| ||||||||||||  | ||||||||||||||||| | ||| ||||||       |||||    
T  19262160 aatcaaaatcgaaagattttactcaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgacggactttacc-aaaaaataata 19262258  T
Q  101 atactaaatatatgttataaa 121  Q
    ||||||| |||||||||||||    
T  19262259 atactaactatatgttataaa 19262279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 25538989 - 25539138
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||  ||||||||||||  || |||| |||||||| ||||||| ||||  | |||| |||||||||||| || |||||||||        ||||    
T  25538989 aatcaaaattaaaggattttactgaactacttttgtagaatcgatataaaaaattgtaaaattgcaatcaaaatcgatagattttaccaaaacagaaata 25539088  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagttta 151  Q
    || ||||||||||||||| | || ||||||||||||| |||||| ||||||    
T  25539089 atgctaaatatatgttat-atattgtatatagtcataaatgactcagttta 25539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 27407076 - 27406927
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||| ||| ||||||||| || |||| || | |||  |||||||||||||| ||||||||||||||||  |||||||| |||        ||||    
T  27407076 aatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatcaaaattgatggatttcaccaaaacaaaaata 27406977  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagttta 151  Q
    || |||||||||| ||||||| | ||||||||| ||| |||||| ||||||    
T  27406976 atgctaaatatatattataaact-gtatatagtaataaatgactcagttta 27406927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 292
Target Start/End: Complemental strand, 17995150 - 17995051
Alignment:
Q  193 ctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||||||| ||| | ||| | |||||||||||||| |||||| ||| ||||||||| ||| |||||||| |||| ||| | ||||| ||||||||||||    
T  17995150 ctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaacaatgatt 17995051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 19245232 - 19245149
Alignment:
Q  209 ctatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    |||||||||||| ||| | ||| |||  ||||||| ||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  19245232 ctatggatttgaatcgctaaagatgagtaaagtcgtaaaatcctgaattttaaaatttaagtcgggattttgacaacaatgatt 19245149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 30433100 - 30433013
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||||||| |||||||||| |  |||| | |||||| |||||| |||||  | ||||||||||||||||  ||||||||||||    
T  30433100 aatcaaaatcgaatgattttactcaaggacttttatagaatcgatataggaaattgtaaaatcgcaatcaaaatagatggattttacc 30433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 24473420 - 24473335
Alignment:
Q  203 attctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||| ||| |||||||| | |||||||||||  ||| ||||||||||||||||||| ||| ||| |||| ||||| ||||||||||    
T  24473420 attctgctacggatttgaat-gttgaaggtgagtaaaatcgcaaaatcctgaattttgggacttaagtcacgatttcgacaacaatg 24473335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 13502561 - 13502601
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggatttt 190  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 27750194 - 27750282
Alignment:
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||  ||||||||||||||||| ||| | |  |||||||||||||| || ||||| ||| ||| |||  ||||||||||||||||    
T  27750194 ggattctgttatggatttgagtcgtttaagttaagaaaagtcgcaaaatcttgtattttgggacttaagtcgcgattttgacaacaatg 27750282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 16767026 - 16766987
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggattt 189  Q
    |||||||||||||||||||||||| |||||||| ||||||    
T  16767026 tataagaaatcgtaaaatcgcaatcaaaatcaaaggattt 16766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 15516610 - 15516667
Alignment:
Q  210 tatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattta 267  Q
    |||| |||||| | |||||||||||| ||||||||||||| |||||| ||| ||||||    
T  15516610 tatgaatttgaattgttgaaggtgaataaagtcgcaaaatgctgaatattaagattta 15516667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 1e-70; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 28746061 - 28745768
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||| ||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||        | ||    
T  28746061 aatcaaaatcgaagaattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaa-atta 28745963  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataa------gaaatcgtaaaatcgcaattaaaatcaatggattttttct 194  Q
    ||| ||||||||||||||||| | ||||||||||||| ||||||||||||||||      ||||||||||||||||||| |||||| ||| ||||| |||    
T  28745962 atagtaaatatatgttataaa-tagtatatagtcataaatgacttagtttataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtct 28745864  T
Q  195 attttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  || ||||||||||||||||||    
T  28745863 attttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaatga 28745768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 122 - 289
Target Start/End: Complemental strand, 29067450 - 29067283
Alignment:
Q  122 atggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgag 221  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  29067450 atggtatatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgag 29067351  T
Q  222 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||    
T  29067350 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaatg 29067283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 6 - 290
Target Start/End: Complemental strand, 39428183 - 39427900
Alignment:
Q  6 aaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatact 105  Q
    ||||||||||||||||||| |  | || ||| |||| |||||| |||||  | ||||||||||||||||| ||||||||||||        | |||||||    
T  39428183 aaatcgaaggattttactcaaagatttttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaattaatact 39428084  T
Q  106 aaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggatt 205  Q
    |||||||||||||||  | ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| ||||||||||||||    
T  39428083 aaatatatgttataag-tagtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggatt 39427985  T
Q  206 ctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||| | ||||||  |||||  || ||||||||||||| ||||    
T  39427984 ctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaacgatga 39427900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 8 - 289
Target Start/End: Original strand, 8155980 - 8156261
Alignment:
Q  8 atcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnn-taataatacta 106  Q
    ||||||||||||||||| || |||| ||||| ||||||||||||||   | ||||||||||||| |||  |||||||||||        |||||||||||    
T  8155980 atcgaaggattttactcaactacttttgtagcattgatataagaaactgtaaaatcgcaatcaatatcg-tggattttaccaaaaataataataatacta 8156078  T
Q  107 aatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttcta-ttttgggatt 205  Q
    ||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||    
T  8156079 aatatatgttataaa-tggtatatagttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgggatt 8156177  T
Q  206 ctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
     ||||||||||||||||| ||||||||||| ||| ||| ||||| ||||||||||| ||||| ||  |||||||||||||||||    
T  8156178 atactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaatg 8156261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 24620041 - 24620334
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnn--taa 98  Q
    |||||||||||||||||||||||| |  |||| |||||||| ||||||  ||||  | ||||||||||||||||   |||||||||||         |||    
T  24620041 aatcaaaatcgaaggattttactcaaagacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaattgttggattttaccaaaaaaaaataa 24620140  T
Q  99 taatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattt 198  Q
     |||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||| ||| |||||  ||||||    
T  24620141 aaatactaaatatattttataaa-tggtatataatcataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattttgcctattt 24620239  T
Q  199 tgggattctactatggatttgagtcgttgaaggtgaagaaa---gtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatga 290  Q
    || ||||||||| || |||||||||||||||||||||||||   ||||||||||| | |||||||||||||| ||| | ||||||||||||||||    
T  24620240 tgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaatga 24620334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 22137559 - 22137278
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||| ||| ||||||||| || |||| |||||||| ||||||||||||| | ||| |  |||||||||  |||||||||||        ||||||||    
T  22137559 caaaatcaaagaattttactcaactacttttgtagaatcgatataagaaatcgtaaaaccaaaatcaaaattgatggattttacaaaaaaattaataata 22137460  T
Q  104 ctaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttggga 203  Q
    ||||||||| |||||||| | ||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||| |||||||||   ||||||||||    
T  22137459 ctaaatata-gttataaa-tagtatatagtcataaatgacttagtaaataagaaatcg-aaaatcgcaattaaaatcgatggattttgcatattttggga 22137363  T
Q  204 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    || ||||||||||||||| |||| |||||||||||||||| || ||| |||||||||||||||| ||||||||||| | ||||||    
T  22137362 ttttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttaggatttaagtcaggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 42697129 - 42696920
Alignment:
Q  5 aaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataatac 104  Q
    ||||| ||||||||||| || || |||| |||||||| ||||||||||||||| || |||||||||||||| ||||||||||||        || |||||    
T  42697129 aaaattgaaggattttattcaactacttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttaccaaaaaaaaaaaaatac 42697030  T
Q  105 taaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggat 204  Q
     |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| |||||  |||||||| |||    
T  42697029 caaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgagat 42696931  T
Q  205 tctactatgga 215  Q
    |||||||||||    
T  42696930 tctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 17064592 - 17064326
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| || |||| ||||||||  |||||||||||  | |||| |||||||||||| ||||||||||||        || |    
T  17064592 aatcaaaatcgaaggattttactcaactacttttgtagaatcaatataagaaattgtaaaattgcaatcaaaatcgatggattttaccaaaaaaaaaa-a 17064494  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    |||||||||||||               ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| ||||| ||||||||     
T  17064493 atactaaatatat---------------atagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctatttta 17064409  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgaca 283  Q
    | ||||||||||| ||| ||||||||||||||||| | | |||||||||||||||||||| |||||| ||| |||||||||||    
T  17064408 gaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 139 - 287
Target Start/End: Original strand, 3449272 - 3449419
Alignment:
Q  139 atgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaa 238  Q
    |||||||| |||||||||||||||||||||||||| |||||| |||||||||  ||||||| |||||||||||| ||||| || |||||||||| |||||    
T  3449272 atgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaaggtaaagaa 3449370  T
Q  239 agtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  3449371 agtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 139 - 288
Target Start/End: Complemental strand, 20756188 - 20756039
Alignment:
Q  139 atgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaa 238  Q
    ||||||||||||||||||||||||||||| ||||| |||||| || ||||||  |||||||  |||||||||||||||||||||| ||||||||||||||    
T  20756188 atgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtgaagaa 20756089  T
Q  239 agtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    | ||||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  20756088 aatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 96 - 279
Target Start/End: Complemental strand, 21963620 - 21963438
Alignment:
Q  96 taataatactaaatatatgttataaaatgg-tatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttct 194  Q
    ||||||||||||||||| ||||||||  |  |||||||||||| ||||||||||  ||||||||||| |||||||| || |||||| |||||||||   |    
T  21963620 taataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattttgcat 21963523  T
Q  195 attttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggatttt 279  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| ||| |||||||    
T  21963522 attttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 96 - 279
Target Start/End: Complemental strand, 21986056 - 21985874
Alignment:
Q  96 taataatactaaatatatgttataaaatgg-tatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttct 194  Q
    ||||||||||||||||| ||||||||  |  |||||||||||| ||||||||||  ||||||||||| |||||||| || |||||| |||||||||   |    
T  21986056 taataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattttgcat 21985959  T
Q  195 attttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggatttt 279  Q
    ||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||| ||| |||||||    
T  21985958 attttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 30727694 - 30727820
Alignment:
Q  162 taaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttag 261  Q
    |||||||||||| |||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | | ||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  262 gatttaggtcaggattttgacaacaat 288  Q
    |||||| ||||||||||||| ||||||    
T  30727794 gatttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 101 - 267
Target Start/End: Original strand, 22494731 - 22494889
Alignment:
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    ||||||||||||||||||||| |||||||||||||||  |||||||||||||       |||||||||||||| |||||| ||| ||||| | ||||||     
T  22494731 atactaaatatatgttataaa-tggtatatagtcataactgacttagtttat-------cgtaaaatcgcaatcaaaatcgatgaattttgtttatttta 22494822  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattta 267  Q
    ||||||||||||| |||| |||||||||||||||| ||||||||||||||    |||||||||||||    
T  22494823 ggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagattttaggattta 22494889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 184 - 289
Target Start/End: Complemental strand, 27676460 - 27676355
Alignment:
Q  184 ggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgaca 283  Q
    |||||||  ||||||||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||| |||||| |||||| |||||||||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  284 acaatg 289  Q
    ||||||    
T  27676360 acaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 15515195 - 15515296
Alignment:
Q  97 aataatactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctat 196  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||| | | |||||| ||||    
T  15515195 aataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtgaaatcgaagttaaaatcgacgaatttttcctat 15515293  T
Q  197 ttt 199  Q
    |||    
T  15515294 ttt 15515296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 142 - 291
Target Start/End: Original strand, 25870350 - 25870508
Alignment:
Q  142 acttagtttataagaaatcgtaaaatcgcaattaaaatcaa-----tggattttttctattttgggattctactatggatttgagtcgtt----gaaggt 232  Q
    ||||| |||||||||||||||||||||||||| ||||||||     ||||||||  |||||||| | |||||||| | ||||||||||||    |||| |    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagat 25870449  T
Q  233 gaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||||||||| ||||||| || ||||||||||||| |||  ||||||||||||||||||    
T  25870450 gaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaatgat 25870508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 139 - 289
Target Start/End: Original strand, 22356032 - 22356183
Alignment:
Q  139 atgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttgggattctactatggatttgagtcgttgaaggtg-aaga 237  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||||||||   |||||| ||||||||||||| |||  | | ||||||| || || |    
T  22356032 atgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaa 22356131  T
Q  238 aagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    || ||  ||||||||||||||||||||||| ||| | ||||||| |||||||    
T  22356132 aaatcttaaaatcctgaattttaggatttaagtcggaattttgataacaatg 22356183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 24649724 - 24649818
Alignment:
Q  194 tattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||  |||||| |||||| ||| ||||||||||||||||    
T  24649724 tattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatcctagattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 15806543 - 15806635
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||| ||| ||||||||| ||| |||||||||||||||||    
T  15806543 ttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgacaacaatg 15806635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 27676721 - 27676634
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||||||| |||||||||| || |||| |||| ||| ||||||||||||| | ||||| ||||||||||||||||||||||||    
T  27676721 aatcaaaatcgaaagattttactcaactacttttgtaaaatcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttacc 27676634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 17796473 - 17796374
Alignment:
Q  192 tctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||||||| ||||||| ||||| |||||||| ||||||| |||| ||||||| ||||||||  |||||| |||||| ||| | |||||||||||||||||    
T  17796473 tctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatgat 17796374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 19104913 - 19104814
Alignment:
Q  192 tctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||||||| ||||||| ||||| |||||||| ||||||| |||| ||||||| ||||||||  |||||| |||||| ||| | |||||||||||||||||    
T  19104913 tctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatgat 19104814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 10872971 - 10873053
Alignment:
Q  184 ggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggattt 266  Q
    |||||||  |||||||| |||||| ||||||||||||||||||||||||||| ||  || |||||||||| ||||||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggattt 10873053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 25870169 - 25870294
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaataata 103  Q
    ||||||| ||||||||||||| || |  | |||||||| ||||||||||||  | ||||||||||||||||| ||||||||||||        |||||||    
T  25870169 caaaatcaaaggattttactcaactaagtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaac-aataata 25870267  T
Q  104 ctaaatatatgttataaaatggtatata 131  Q
    ||||||||||||||| ||||||||||||    
T  25870268 ctaaatatatgttat-aaatggtatata 25870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6136413 - 6136500
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||| || |||||||||| || |||| | |||||| ||||||||||||| | ||||| ||||||||||| ||||||||||||    
T  6136413 aatcaaaatcaaaagattttactcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaatcgatggattttacc 6136500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13286229 - 13286142
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||| || |||||||||| || |||| |||||||| ||||||||||||| | ||||| |||| |||||| ||||||||||||    
T  13286229 aatcaaaatcaaaagattttactcaactacttttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggattttacc 13286142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 209 - 287
Target Start/End: Complemental strand, 28135801 - 28135723
Alignment:
Q  209 ctatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaa 287  Q
    |||||||||||||||  |||| ||||| |||||||||||||||||||||||| ||||||  || | |||||||||||||    
T  28135801 ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 28136046 - 28135960
Alignment:
Q  2 atcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||||||||||||||||| || |||| |||| ||||||||||||||||  | |||| | |||||||||||||  ||||||||    
T  28136046 atcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaattgtaaaataggaatcaaaatcaatatattttacc 28135960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 17796364 - 17796265
Alignment:
Q  192 tctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||||||| ||||||| ||||| |||| ||| |||||||||||| |||||| |||||||||  |||||| |||||| ||  | |||||||||| ||||||    
T  17796364 tctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatgat 17796265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 17796582 - 17796483
Alignment:
Q  192 tctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||||||| ||||||| ||||| |||| ||| |||||||||||| ||||||| ||||||||  |||||| ||||||  ||   |||||||||||||||||    
T  17796582 tctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatgat 17796483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 19104804 - 19104705
Alignment:
Q  192 tctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||||||| ||||||| ||||| |||| ||| |||||||||||| |||||| |||||||||  |||||| |||||| ||  | |||||||||| ||||||    
T  19104804 tctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatgat 19104705  T

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Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 291
Target Start/End: Complemental strand, 19105022 - 19104923
Alignment:
Q  192 tctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgat 291  Q
    |||||||| ||||||| ||||| |||| ||| |||||||||||| ||||||| ||||||||  |||||| ||||||  ||   |||||||||||||||||    
T  19105022 tctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatgat 19104923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 20756307 - 20756188
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||| ||| |||||||||| |  | || |||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||        ||||    
T  20756307 aatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaga-aata 20756209  T
Q  101 atactaaatatatgttataaa 121  Q
    |||||||||||||||||||||    
T  20756208 atactaaatatatgttataaa 20756188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 3449157 - 3449241
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||| ||||||| || || |||| |||||||| |||||||||||   | ||||||||||||||||  ||||||||||||    
T  3449157 caaaatcgaatgattttattcaactacttttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 3449241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 29067557 - 29067475
Alignment:
Q  6 aaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||||||||||||| |  | || ||||||||||||||  ||| |  | ||||||||||||||||| ||||||||||||    
T  29067557 aaatcgaaggattttactcaaggatttttgtagaattgatattggaagttgtaaaatcgcaatcaaaatcgatggattttacc 29067475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 13006019 - 13005927
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    |||||||||| | ||||||||||||   ||| |||||||| |||||||||||||  ||||||||   ||||| |||  |||||||||||||||    
T  13006019 ttttgggattttgctatggatttgaaatgttaaaggtgaataaagtcgcaaaattatgaattttgaaatttaagtcgagattttgacaacaat 13005927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 27676677 - 27676637
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggatttt 190  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  27676677 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 27676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 42696914 - 42696870
Alignment:
Q  240 gtcgcaaaatcctgaattttaggatttaggtcaggattttgacaa 284  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||    
T  42696914 gtcgcaaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 10872559 - 10872646
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    ||||||||| |||||||||||||  || |||| || ||||| ||||||||||||| | |||||  ||| |||||  ||||||||||||    
T  10872559 aatcaaaattgaaggattttactaaactacttttgaagaatcgatataagaaatcgtaaaatcagaataaaaattgatggattttacc 10872646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 6136457 - 6136497
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggatttt 190  Q
    ||||||||||||||||||| |||| |||||| |||||||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 13286185 - 13286145
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggatttt 190  Q
    ||||||||||||||||||| |||| |||||| |||||||||    
T  13286185 tataagaaatcgtaaaatcacaatgaaaatcgatggatttt 13286145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22971094 - 22971050
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgat 45  Q
    |||||||||||||||||||||||| |  |||| ||||||||||||    
T  22971094 aatcaaaatcgaaggattttactcaaggacttttgtagaattgat 22971050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 25870210 - 25870250
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggatttt 190  Q
    |||||||||| ||||||||||||| |||||| |||||||||    
T  25870210 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 25870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 7299 - 7585
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| |  |||| ||| |||| |||||| |||||  |  |||||||||||||||| ||| ||||||||        ||||    
T  7299 aatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatcaaaatcgatgaattttaccaaaaaac-aata 7397  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctattttg 200  Q
    |||||||||||||||| |||  ||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||| ||| |||||  |||||||     
T  7398 atactaaatatatgttctaat-tggtatatattcataaattacttcgtttataagaaatcgtaaaatcgcaattaaaatcgatgaattttgcctatttta 7496  T
Q  201 ggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||||| ||||| ||| ||||| | |||||||||    
T  7497 ggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattctaacaacaatg 7585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 93549 - 93834
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    ||||||||||||||||||||| || || |||| |||||||| ||||||| ||||| | ||||||||||||||||| ||||||||||||        ||||    
T  93549 aatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaca-aata 93647  T
Q  101 atactaaatatatgttataaaatggtatat-agtcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcaatggattttttctatttt 199  Q
     ||||||||||||||||| || | |||||| ||||||| | |||||| |||| ||||||||||||||||||||| |||||| ||||||||   |||||||    
T  93648 ttactaaatatatgttatgaa-tcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctatttt 93746  T
Q  200 gggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
     | ||||| |||||||||||||| ||||| |||||||||| |  |||||| ||| ||||||||||||| ||| |||||||||||||||||    
T  93747 agaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggattttgacaacaatg 93834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 150 - 289
Target Start/End: Original strand, 91 - 231
Alignment:
Q  150 tataagaaatcgtaaaatcgcaattaaaatcaatggattttttc-tattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaa 248  Q
    |||||||||| |||||||| |||| |||||| |||||||||  | |||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  91 tataagaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaa 190  T
Q  249 tcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||| ||||||||||||| ||| |||| ||  ||||||||    
T  191 tcctgcattttaggatttaagtcgggatcttatcaacaatg 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 51 - 131
Alignment:
Q  4 caaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggatttt 85  Q
    ||||||||||||||||||||| || |||| |||||||| ||||||||||||  | ||||| ||||||||||| |||||||||    
T  51 caaaatcgaaggattttactcaactactt-tgtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggatttt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 8803 - 8952
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttaccnnnnnnntaata 100  Q
    |||||||||||||||||||||||| || |||| |||||||| |||||||||| |  | ||||||||||||||||| ||||||||||||         |||    
T  8803 aatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcgatggattttaccaaaacaaagata 8902  T
Q  101 atactaaatatatgttataaaatggtatatagtcatagatgacttagttta 151  Q
    || ||||||||||||||| || | ||||||||||||| |||||| ||||||    
T  8903 atgctaaatatatgttat-aagttgtatatagtcataaatgactcagttta 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 209 - 292
Target Start/End: Original strand, 9070 - 9153
Alignment:
Q  209 ctatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatgatt 292  Q
    ||||||||||||||||||||||||||| ||| || |||||||||  ||||||  |||||  |||||||||||||||||||||||    
T  9070 ctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaatgatt 9153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 196 - 289
Target Start/End: Original strand, 48825 - 48918
Alignment:
Q  196 ttttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaatg 289  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||| ||| | ||||| |||||||||    
T  48825 ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaatg 48918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 48506 - 48591
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggatttta 86  Q
    |||||||||||||||||||||||  || |||| |||||||| |||| ||||| || | ||||||| ||||||||| ||||| ||||    
T  48506 aatcaaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatggacttta 48591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 61158 - 61243
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggatttta 86  Q
    |||||||||||||| ||||||||  || |||| |||||||| |||||| |||||| | |||||| || ||||||| ||||| ||||    
T  61158 aatcaaaatcgaagaattttacttaactacttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcgatggacttta 61243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 61418 - 61472
Alignment:
Q  194 tattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaa 248  Q
    ||||||||||||||  |||||||||||  ||||||||| ||| ||||||||||||    
T  61418 tattttgggattctcatatggatttgaaccgttgaaggcgaataaagtcgcaaaa 61472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 56269 - 56356
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaaaatcaatggattttacc 88  Q
    |||||||||||||||||||||||| |  |||| |||||||| |||||| |||||  | ||||||||||||||||| ||||||||||||    
T  56269 aatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 56356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 58746 - 58790
Alignment:
Q  123 tggtatatagtcatagatgacttagtttataagaaatcgtaaaat 167  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||    
T  58746 tggtatatagtcataaatgatttagtttataagaaatcgtaaaat 58790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 184 - 289
Target Start/End: Original strand, 37191 - 37296
Alignment:
Q  184 ggattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgaca 283  Q
    |||||||  |||||||  |||||| |||||||||||||| |||||||||||| ||| | ||||||| ||||||||||  ||||| ||| | |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  284 acaatg 289  Q
    ||||||    
T  37291 acaatg 37296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 203 - 288
Target Start/End: Original strand, 35103 - 35188
Alignment:
Q  203 attctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaggtcaggattttgacaacaat 288  Q
    ||||||| ||| |||||||||||| |||||||| |||||  ||||||  |||||||||| ||||| |||  |||||||||||||||    
T  35103 attctacaatgaatttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaacaat 35188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 955 - 885
Alignment:
Q  1 aatcaaaatcgaaggattttactcgaccacttctgtagaattgatataagaaatcatcaaatcgcaatcaa 71  Q
    |||||||||||||| ||||||||| || |||| |||||||  ||||||||||||  | |||||||||||||    
T  955 aatcaaaatcgaagaattttactcaactacttttgtagaacagatataagaaattgtaaaatcgcaatcaa 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1892 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1892
Description:

Target: scaffold1892; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 185 - 250
Target Start/End: Complemental strand, 951 - 886
Alignment:
Q  185 gattttttctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatc 250  Q
    ||||||| ||||||||||||||| |||| ||||||||| ||||||| | |  ||||||||||||||    
T  951 gatttttcctattttgggattctgctatcgatttgagttgttgaagataagtaaagtcgcaaaatc 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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