View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16231_low_1 (Length: 828)
Name: NF16231_low_1
Description: NF16231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16231_low_1 |
 | |
|
| [»] scaffold0879 (1 HSPs) |
| | |
|
| [»] scaffold0565 (1 HSPs) |
| | |
|
| [»] scaffold0070 (2 HSPs) |
| | |
|
| [»] scaffold0564 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 336; Significance: 0; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 452 - 811
Target Start/End: Complemental strand, 8083825 - 8083466
Alignment:
| Q |
452 |
tccaaataatatttggacagaatctatattgtaacttacctttacaacagaaaatgaagatgctatatgttgatcgaaggtagaccaagtaaagtgtttt |
551 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
8083825 |
tccaaataatatttggacagaatctatattgtaacttacctttacaacagaaaatgaggatgctatatgttgatcgaaggtagaccaagtaaagtgtatt |
8083726 |
T |
|
| Q |
552 |
aattaggttaaaaaatgaaagtgatgaacaaatagacgtaatgtcaagattcaaagttgagtaaattggctacaaaattatatttaccaaacaatacacg |
651 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8083725 |
aattaggttaaaaaatgaaagtgctgaacaaatagacgtaatgtcaagattcaaagttgagtaaattggctacaaaattatatttaccaaacaatacacg |
8083626 |
T |
|
| Q |
652 |
tctttaatttatagttcaatgtcaggatccaaattagtttgtgaggtgattgaggtggaccataacattatgagtctatgacataggtgttgcaattgcc |
751 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8083625 |
tctttaatttatagttcaatgtcaagatccaaattagtttgtgaggtgattgaggtggaccataacactatgagtctatgacataggtgttgcaattgcc |
8083526 |
T |
|
| Q |
752 |
taaccaatgatgccaccaacatttgcactatcttatatgaaaattgatgttgacacatat |
811 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8083525 |
taaccaatgatgccaccaacatttgcactatcttatatgaaaattgatgttgatacatat |
8083466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 7 - 354
Target Start/End: Complemental strand, 8084270 - 8083921
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
8084270 |
gtgaatagattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggat-----tagtaaaataaggagtgtgg |
8084176 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8084175 |
ttatcatcggattgattcatcagtttcacggatcttgaaatgaaaaaccatgaaccaaaccaaactagatcggtttcgattggttcggattggtttcaaa |
8084076 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatatt-ttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacac----ccctacccacg |
301 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||| || |||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||| |
|
|
| T |
8084075 |
ccaaaccaaacaaggtcggatatttttttcggtttgatttagtttggactttcgatttcgttggttatgtccgaaccacttacacctctctctacccacg |
8083976 |
T |
|
| Q |
302 |
gtggaaccaatgagaaccg--tctctctctggaccagactttcctctcactcatg |
354 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
8083975 |
gtggaaccaatgagaaccgtctctctctctggaccacgctttcctctcactcatg |
8083921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 7 - 296
Target Start/End: Original strand, 16584770 - 16585051
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | |||||||| ||||||||||||||| |||| |||||||||||||||||||| ||| |
|
|
| T |
16584770 |
gtgaatggattaaaaagtattttatgtttaattttgggtctaaccataagtttgtgtgaggtatgata--------atattagtaaaataaggagtttgg |
16584861 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
|||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
16584862 |
ttatcatcagattggttcatcggtttcacggatctcgaaataaaaaaccatgaaccaaaccaaactagatcggtatcgattggttcggatcggtttcaaa |
16584961 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacccctac |
296 |
Q |
| |
|
|| ||||||||||||| ||||||||||||| |||||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
16584962 |
ccgaaccaaacaaggttggatattttttcgttttggttcggtttggactttcggtttcgttggttttgtccgaaccacttacacccctac |
16585051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 1161339 - 1161618
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1161339 |
gtgaatggattaaaaaatattttatgtttaattttgggctgaaccataagtttgtgtgaggtaggat--------aatattagtaaaataaggagtgtgg |
1161430 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
1161431 |
ttatcatcggattggttcatcggtttcacggatatcgaaatgaaaaaccatgaaccaaaccaaactagatcggtttcgattggcttggattggtttcaaa |
1161530 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|| ||||||| ||||||||||| ||||||| |||||||| |||| ||||| ||||| ||| ||| ||| |||||||||||||||||| |
|
|
| T |
1161531 |
ccgaaccaaataaggtcggata-tttttcggtttggttcggtttaaacttttgatttcgttggttcagtctgaaccacttacaccccta |
1161618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 84 - 241
Target Start/End: Complemental strand, 25785962 - 25785805
Alignment:
| Q |
84 |
tattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttc |
183 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||| || |||||| |
|
|
| T |
25785962 |
tattagtaaaataaagaatgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaactatatcggtttc |
25785863 |
T |
|
| Q |
184 |
gattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttg |
241 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
25785862 |
gattggttcggatcggtttcaaaccgaaccaaacaaggtcggatattttttcggtttg |
25785805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 11620196 - 11619979
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
|||||| ||||||||| ||||| ||||||||||||| | ||||||| |||||||| ||||||||||| ||||||||||||||| |||||| |
|
|
| T |
11620196 |
gtgaattgattaaaaagtatttcatgtttaattttgggtttaaccataagtttgtg--aggtaggataa--------tattagtaaaataagtagtgtga |
11620107 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| ||||||||| |
|
|
| T |
11620106 |
gtatcatcggattggttcatcggtttcacagatctcaaaatgaaaaaccatgaaccaaaccaaactagatcggtttcgattagtttggatcggtttcaaa |
11620007 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatatttttt |
234 |
Q |
| |
|
| ||||||||||| ||||||||||||| |
|
|
| T |
11620006 |
ctgaaccaaacaagatcggatatttttt |
11619979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 42009995 - 42010155
Alignment:
| Q |
135 |
cggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatatttttt |
234 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
42009995 |
cggatctcaaaatgaaaaaccatgagtcaaactaaactagatcggtttcaattggtttggatcggtttcaaaccgaaccaaacaatgtcggatatttttt |
42010094 |
T |
|
| Q |
235 |
cgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|| |||||| ||||||||||| ||| ||| ||| |||| |||||||| |||||||||||| |
|
|
| T |
42010095 |
cggtttggtccagtttggactatcggtttcgttggtttaatccgaaccgcttacaccccta |
42010155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 77 - 231
Target Start/End: Complemental strand, 18461327 - 18461173
Alignment:
| Q |
77 |
tggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagat |
176 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||||| |||||| || |
|
|
| T |
18461327 |
tggataatattaataaattaatgagtgtggttatcatcggattggttcatcggtttcacggatctcgaaataaaaaatcatgaaccaaaccaaactaaat |
18461228 |
T |
|
| Q |
177 |
tggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattt |
231 |
Q |
| |
|
||||| ||||||| | ||| | ||| ||||| ||| |||||||||||||||||| |
|
|
| T |
18461227 |
cggttttgattggtccagatcgatttgaaaccgaactaaacaaggtcggatattt |
18461173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 168 - 291
Target Start/End: Complemental strand, 513080 - 512957
Alignment:
| Q |
168 |
aaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgtt |
267 |
Q |
| |
|
||||||||| ||||| | ||||||||| ||||||| |||| ||||||||||| | ||||| ||||||| |||||||| ||||| ||| ||||| | |
|
|
| T |
513080 |
aaactagatcggtttaggttggttcggtttggttttgaaccgaaccaaacaagattggatactttttcggtttggttcgatttgggtttttgatttcatc |
512981 |
T |
|
| Q |
268 |
agttttgtccgaaccacttacacc |
291 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
512980 |
agttttgtccgaaccacttacacc |
512957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 8414674 - 8414764
Alignment:
| Q |
205 |
aaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||| |||||||||||| |||| ||| | ||||||||||||||||||||| ||||| |
|
|
| T |
8414674 |
aaccaaaccaaacaaggtcggatactttttcggttttgttcagtttggattttcagtttcatcggttttgtccgaaccacttacatcccta |
8414764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 25787359 - 25787295
Alignment:
| Q |
11 |
atggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataa |
75 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| | ||||| || ||||||||||||||||||||| |
|
|
| T |
25787359 |
atggattaaaaattatttaatgtttaattttgggtctaacaataagtttgtgtgaggtaggataa |
25787295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 32678514 - 32678602
Alignment:
| Q |
203 |
caaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacc |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||| ||||| | ||||||||| | ||||||| ||||||||||||||| |
|
|
| T |
32678514 |
caaaccaaaccaaacaaggtcggatattttttcggcttagttcggtttgaattttcgatttcatcggttttgttcgaaccacttacacc |
32678602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 244
Target Start/End: Complemental strand, 11911802 - 11911635
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagatt |
177 |
Q |
| |
|
||||||||||| | |||| |||||| | ||| ||||| ||| |||||| ||| ||||| || |||| |||||||| |||| ||| ||||||||| |
|
|
| T |
11911802 |
ggataatattactcaaatggggagtgagtttagtatcggtttggttcatcggttcatcggatttcaaaattaaaaaccaagaactaaatcaaactagatc |
11911703 |
T |
|
| Q |
178 |
ggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggata-ttttttcgatttggtt |
244 |
Q |
| |
|
||||| | ||||||||| | ||||| |||| ||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
11911702 |
ggtttaggttggttcggttcggttttgaaccgaaccaaacaaggtcggatacttttttcgaattggtt |
11911635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 27320541 - 27320647
Alignment:
| Q |
186 |
ttggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccact |
285 |
Q |
| |
|
||||||||| ||| ||| |||| ||||||||||||||||||| ||||| |||||| |||||||| || ||||| ||| | |||| |||| ||||||| |
|
|
| T |
27320541 |
ttggttcggtttgattttgaaccgaaccaaacaaggtcggatacttttttgatttgattcagtttagattttcggtttcatcggtttcgtccaaaccact |
27320640 |
T |
|
| Q |
286 |
tacaccc |
292 |
Q |
| |
|
||||||| |
|
|
| T |
27320641 |
tacaccc |
27320647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 42009922 - 42009999
Alignment:
| Q |
33 |
tttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtggttatcatcggat |
118 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
42009922 |
tttaattttaggcctaaccataagtttgtgtgaggtaggatac--------tattagtaatataaggagtgtggttatcatcggat |
42009999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 452 - 789
Target Start/End: Original strand, 29800081 - 29800421
Alignment:
| Q |
452 |
tccaaataatatttggacagaatctatattgtaacttacctttacaacagaaaatgaagatgctatatgttgatcgaaggtagaccaagtaaagtgtttt |
551 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||| || |
|
|
| T |
29800081 |
tccaaataatatttggacagaatctatattgtaacttaagtttataacagaaaataaagatgctatatattgatcgaaagtagaccaagtaaagtgtatt |
29800180 |
T |
|
| Q |
552 |
aattaggttaaaaaatgaaagtgatgaacaaatagacgtaatgtcaagattcaaagttgagtaaattggctacaaaattatatttaccaaacaatacacg |
651 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
29800181 |
aattaggttaaaaaatggaagtggcgaacaaatagacgtaatgtcaatattcaaagttgagtaaattggctacaaaattagatttaccaaacaacacacg |
29800280 |
T |
|
| Q |
652 |
tctttaat---ttatagttcaatgtcaggatccaaattagtttgtgaggtgattgaggtggaccataacattatgagtctatgacataggtgttgcaatt |
748 |
Q |
| |
|
|||||||| | |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| || | | ||| |
|
|
| T |
29800281 |
tctttaattaataatagttcaatgtcaagatccaaattagtttgtgaggtgattgcggtggaccgtaacactatgagtctatgacatagttgctacgatt |
29800380 |
T |
|
| Q |
749 |
gcctaaccaatgatgccaccaacatttgcactatcttatat |
789 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||| |||| |
|
|
| T |
29800381 |
gcctaaccaatgataccaccaacattggcactatctcatat |
29800421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 11 - 292
Target Start/End: Complemental strand, 19947984 - 19947711
Alignment:
| Q |
11 |
atggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtggttat |
110 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
19947984 |
atggattaaaaagtatcttatgtttaattttgggcctaaccataagtttgtgtgaggtaggataa--------tattagtaaaataaggagtgtggttat |
19947893 |
T |
|
| Q |
111 |
catcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaa |
210 |
Q |
| |
|
|||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||| | ||||||||||| |||| |||||||||| | |
|
|
| T |
19947892 |
catcggattggttcatcggtttcacggatcttgaaatgaaaaaccatgaaccaaatcaaagtagatcagattcgattggtttggatcggtttcaaactga |
19947793 |
T |
|
| Q |
211 |
accaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccc |
292 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||| ||||||||||||| || ||| ||||||||||||||||||||||| |
|
|
| T |
19947792 |
accaaacaatgtcggatattttttcggtttggttcggtttggactttcggattcgttgattttgtccgaaccacttacaccc |
19947711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 7 - 295
Target Start/End: Complemental strand, 31896169 - 31895896
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtt------taattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataagga |
100 |
Q |
| |
|
|||||||||||| ||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31896169 |
gtgaatggattataaaatattttatgttggactttaattttgggcctaaccataagtttgtgtgaggtaggataa--------tattagtaaaataagga |
31896078 |
T |
|
| Q |
101 |
gtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggt |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||| ||||| |||||||||||| ||||||||| ||||| ||||||||| ||| ||| |
|
|
| T |
31896077 |
gtgtggttatcatcgg-------------tttcacggatcacgaaataaaaaatcatgaaccaaaccaaactagatcggtttggattggttcagatcggt |
31895991 |
T |
|
| Q |
201 |
ttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31895990 |
ttcaaaccgaaccaaacaaggtcggatattttttcggtttggttcagtttggactttcgattttgttggttttgtccgaaccacttacaccccta |
31895896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 37 - 238
Target Start/End: Original strand, 16746357 - 16746550
Alignment:
| Q |
37 |
attttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacg |
136 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
16746357 |
attttgggcctaaccataagtttgtgtgaggtaggat--------aatattagtaaaataaggagtgaggttatcatcggattggttcatcgatttcacg |
16746448 |
T |
|
| Q |
137 |
gatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcg |
236 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
16746449 |
gatctcgaaatgaaaaaccatgaatcaaaccaaactagatcggtttcgattggtttggatcggtttcaaaccgaaccaaacaaggttggatattttttcg |
16746548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 130 - 295
Target Start/End: Original strand, 16746561 - 16746726
Alignment:
| Q |
130 |
tttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatat |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| |||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
16746561 |
tttcacggatctcgaaatgaaaaaccatgaatcaaaccaaactagatcggtttcgattggtttggatcggtttcaaaccgaaccaaacaaggttggatat |
16746660 |
T |
|
| Q |
230 |
tttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||||||||||| |||| |||||||| ||| ||| ||||||||||||||||||||| ||||| |
|
|
| T |
16746661 |
tttttcgatttggttcggtttagactttcggtttcgttggttttgtccgaaccacttacatcccta |
16746726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 29126220 - 29126089
Alignment:
| Q |
158 |
gaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggacttt |
257 |
Q |
| |
|
|||||||||||||||||| ||||| | |||||| | | |||||||||| | |||||||| ||||||| ||||||| |||||||| |||| | | | |
|
|
| T |
29126220 |
gaaccaaactaaactagaccggtttaggttggtttagttcggtttcaaactgacccaaacaaaatcggatactttttcggtttggttcggtttaaattct |
29126121 |
T |
|
| Q |
258 |
cgattttgttagttttgtccgaaccacttaca |
289 |
Q |
| |
|
| |||| ||| ||||||||||||||||||||| |
|
|
| T |
29126120 |
ccatttcgttggttttgtccgaaccacttaca |
29126089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 280
Target Start/End: Original strand, 1498243 - 1498365
Alignment:
| Q |
158 |
gaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggacttt |
257 |
Q |
| |
|
|||||||||| ||||| || ||||| | ||||||| | | ||||| |||| ||||||||||||||||||||||| || |||| ||| ||||||| ||| |
|
|
| T |
1498243 |
gaaccaaacttaactacatcggtttaggttggttcagttcggttttgaaccgaaccaaacaaggtcggatattttctcagtttgattcggtttggatttt |
1498342 |
T |
|
| Q |
258 |
cgattttgttagttttgtccgaa |
280 |
Q |
| |
|
|| ||| | |||||||||||| |
|
|
| T |
1498343 |
cggtttcatcggttttgtccgaa |
1498365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 167; Significance: 5e-89; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 7 - 296
Target Start/End: Original strand, 23107807 - 23108098
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtt------taattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataagga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23107807 |
gtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtaggataa--------tattagtaaaataagga |
23107898 |
T |
|
| Q |
101 |
gtgtggttatcatcggattgatt----catcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggat |
196 |
Q |
| |
|
|| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
23107899 |
gtatggttatcatcggattgattggttcatcggtttcacggatctcgaaatgaaaaaccatgaatcaaaccaaactagatcggtttcgattggttcggat |
23107998 |
T |
|
| Q |
197 |
tggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacccctac |
296 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
23107999 |
cggtttcaaaccaaaccaaacaaggtcggatatttttcctgtttggttcggtttggactttcggtttcgttggttttgtccgaaccacttacacccctac |
23108098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 7 - 294
Target Start/End: Original strand, 28319196 - 28319475
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28319196 |
gtgaattgattaaaaaatattttatgtttaattttgggcctaaccataagtttgtgtgaggtaggat--------aatattagtaaaataaggagtgtgg |
28319287 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
|||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| || || | ||| |||||||||||| ||||||||| |
|
|
| T |
28319288 |
ttatcatcagattgattcatcaggttcacgaatctcgaaatgaaaaaccatgaaccaaaccaaattaaatcgattttgattggttcggaacggtttcaaa |
28319387 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacccct |
294 |
Q |
| |
|
|| |||||||||| ||| |||||||||||| |||||||| ||| |||||||||||| ||| |||||| ||||| ||||||| ||||| |
|
|
| T |
28319388 |
ccgaaccaaacaatgtcagatattttttcggtttggttcgatttagactttcgatttcgttggttttgcccgaatcacttacgcccct |
28319475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 24466215 - 24466501
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtt------taattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataagga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
24466215 |
gtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtaggat--------aatattagtaaaataagga |
24466306 |
T |
|
| Q |
101 |
gtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggt |
200 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||| |
|
|
| T |
24466307 |
gtgtggttatcatcggattggttcatcggtttcacggatctcaaaatgaaaaaccatgaaccaaatcaaactagatcggtttcaattggttcggatcggt |
24466406 |
T |
|
| Q |
201 |
ttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| |||||| ||||||||| ||| ||| ||| |||| ||| |||||||||||||||||| |
|
|
| T |
24466407 |
ttcaaaccgaaccaaacaagatcagatattttttcagtttggtctggtttggactatcggtttcgttggtttagtctgaaccacttacaccccta |
24466501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 78 - 292
Target Start/End: Complemental strand, 4413671 - 4413456
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagatt |
177 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4413671 |
ggataatactagtaaaataaggagtgtgattatcatcggattggtttatcggtttcacggatctcgaaatgaaaaaccatgaaccaaagcaaactagatc |
4413572 |
T |
|
| Q |
178 |
ggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatatt-ttttcgatttggttcagtttggactttcgattttgttagttttgtc |
276 |
Q |
| |
|
||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||| |||||| | | |||||||||| ||||| | ||| ||| ||||| || |
|
|
| T |
4413571 |
ggtttcgattggttcggatcggttttaaaccgaaccaaacaagatcggatatttttttcggtctagttcagtttgaacttttggtttcgttggttttatc |
4413472 |
T |
|
| Q |
277 |
cgaaccacttacaccc |
292 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
4413471 |
cgaaccacttacaccc |
4413456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 83 - 292
Target Start/End: Original strand, 8606106 - 8606315
Alignment:
| Q |
83 |
atattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggttt |
182 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| | ||||||| ||| | ||||||| ||||||||||| ||||| ||| || | |||| ||||| |
|
|
| T |
8606106 |
atattagtaaaatggggagtgtggttaccatcggttcgattcattggttccttggatctcaaaatgaaaaactgagaaccgaaccaaccaagatcggttt |
8606205 |
T |
|
| Q |
183 |
cgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaacc |
282 |
Q |
| |
|
|||||||||| ||||||| |||| | |||||||| || ||||| ||||||| ||||||| | ||| |||| || ||| || |||||||||||||| |
|
|
| T |
8606206 |
agattggttcgatttggttttgaaccgagccaaacaaagttggatactttttcggtttggtttaattttgactatcagtttcgtcggttttgtccgaacc |
8606305 |
T |
|
| Q |
283 |
acttacaccc |
292 |
Q |
| |
|
|||||||||| |
|
|
| T |
8606306 |
acttacaccc |
8606315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 158 - 291
Target Start/End: Original strand, 53393204 - 53393337
Alignment:
| Q |
158 |
gaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggacttt |
257 |
Q |
| |
|
||||| ||| ||||||||| ||||| | ||||||||| | |||| ||||| ||||||||||||||||||| ||||| | |||||||| ||||||| ||| |
|
|
| T |
53393204 |
gaaccgaaccaaactagatcggtttaggttggttcggttcagttttaaaccgaaccaaacaaggtcggatacttttttggtttggttcggtttggatttt |
53393303 |
T |
|
| Q |
258 |
cgattttgttagttttgtccgaaccacttacacc |
291 |
Q |
| |
|
|| ||| | ||||||||||||||||||||||| |
|
|
| T |
53393304 |
cggtttcatcggttttgtccgaaccacttacacc |
53393337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 156; Significance: 2e-82; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 7352276 - 7352555
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | ||||| || ||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
7352276 |
gtgaatggattaaaacgtattttatgtttaattttgggtctaactataagtttgtgtgacgtaggataa--------tattagtaaaataaggagtgtgg |
7352367 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
7352368 |
ttatcatcggattgatt-atcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaactagaccggtttcgattggttcggatcggtttcaaa |
7352466 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||||| || |||||||||||||||| || |||| |||||||||||| ||| ||| |||||||| |||||| ||||||||||| |
|
|
| T |
7352467 |
ccaaaccaaataaagtcggatattttttcggttcggtttgatttggactttcggtttcgttggttttgtctgaaccaattacaccccta |
7352555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 8 - 295
Target Start/End: Complemental strand, 39695357 - 39695087
Alignment:
| Q |
8 |
tgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtggt |
107 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||| ||| |
|
|
| T |
39695357 |
tgaatggatgaaaaattattttatgtttaattttgggtctaaccataagtttgtgtgaggtaagataat------------gtaaaataaggagtgaggt |
39695270 |
T |
|
| Q |
108 |
tatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaac |
207 |
Q |
| |
|
||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||||| || |||||||||||||| ||| |||||||||| |
|
|
| T |
39695269 |
tatcatcagattggttcatcggtttcacggacctcgaaatgaaaaaccatgaaccaaaccaaactatatcagtttcgattggttcagatcggtttcaaac |
39695170 |
T |
|
| Q |
208 |
caaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
| |||||||||||||||||||| | |||| |||| | ||||||||||| ||| ||| |||||| |||||||||||||||||||| |
|
|
| T |
39695169 |
cgaaccaaacaaggtcggatatctcttcggtttg-----ggttggactttcggtttcgttggttttgcccgaaccacttacaccccta |
39695087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 46993533 - 46993302
Alignment:
| Q |
8 |
tgaatggattaaaaattattttatgtt------taattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggag |
101 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||| || ||||| | ||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
46993533 |
tgaatggattaaaaagtattttatgttggactttaattttgggcttaaccttaagtttgtgtgaggtacgataa--------tattagtaaaataaggag |
46993442 |
T |
|
| Q |
102 |
tgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtt |
201 |
Q |
| |
|
||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| || |
|
|
| T |
46993441 |
tgtggttatcatcggattggttaatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaactagatcagtttcgattgattcggatcaatt |
46993342 |
T |
|
| Q |
202 |
tcaaaccaaaccaaacaaggtcggatattttttcgatttg |
241 |
Q |
| |
|
||||||| | ||||||||||||| ||||||||| |||||| |
|
|
| T |
46993341 |
tcaaaccgacccaaacaaggtcgaatattttttagatttg |
46993302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 79 - 235
Target Start/End: Complemental strand, 7995161 - 7995005
Alignment:
| Q |
79 |
gataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattg |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||| | |
|
|
| T |
7995161 |
gataatattagtaaaataaggagtgtggttattatcggattggttcatcggtttcacgaatctcaaaatgaaaaaccatgaaccaaaccaaactagatcg |
7995062 |
T |
|
| Q |
179 |
gtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||| |||||||||||| | ||| |||| |||||||||||||| |||||||||| |
|
|
| T |
7995061 |
gtttcaattggttcggatcgattttcaaccgaaccaaacaaggtcaaatattttttc |
7995005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 3996970 - 3997128
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| ||||||||| | | ||||| ||| |||| || ||||||| |||||||| || | ||||| ||||||||||||||| ||||||| || ||| |
|
|
| T |
3996970 |
ggatctcaaaatgaaaaccga-gaaccgaaccaaacaaggttggtttagattggttaggttcggttttgaaccaaaccaaacaaagtcggattcttcttc |
3997068 |
T |
|
| Q |
236 |
gatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
| |||||| | ||||||||||||| ||| || ||||||||||||||||||||||||||| |
|
|
| T |
3997069 |
ggtttggtacggtttggactttcggtttcattggttttgtccgaaccacttacaccccta |
3997128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 107 - 191
Target Start/End: Original strand, 11727326 - 11727410
Alignment:
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggtt |
191 |
Q |
| |
|
|||||||||||||| || ||| |||| ||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||||||| |
|
|
| T |
11727326 |
ttatcatcggattggtttatcggttttacggatctcgaaatgaaaaaccacgaaccaaaccaaactagatcggttttgattggtt |
11727410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 48070773 - 48070614
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| |||| ||||||| ||||| || ||||||||| ||||| | || |||||| | ||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
48070773 |
ggatctcaaaattaaaaaccgagaaccgaatcaaactagatcggtttaggttagttcggttcggttttgaaccaaatcaaacaaggtcggatattttttt |
48070674 |
T |
|
| Q |
236 |
gatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
| ||| |||| |||| || ||||| ||| | |||||||||||||||||||||||||| |
|
|
| T |
48070673 |
ggtttagttcggtttagattttcggtttgatcgattttgtccgaaccacttacaccccta |
48070614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 82 - 266
Target Start/End: Original strand, 46265276 - 46265460
Alignment:
| Q |
82 |
aatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtt |
181 |
Q |
| |
|
|||| ||||||||| ||||||| |||| ||| | ||| |||||| ||||| ||||||| |||||| |||| |||||||| |||| |||| |||| |
|
|
| T |
46265276 |
aataatagtaaaatgaggagtggagttaacattgatttggttcatcggtttcttggatctcaaaatgacaaactgaaaaccaaaccaaacaagatcggtt |
46265375 |
T |
|
| Q |
182 |
tcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgt |
266 |
Q |
| |
|
| ||||| ||||| | ||||| |||| |||| ||||||||||||| |||| | |||||||| ||||||||||||| |||||| |
|
|
| T |
46265376 |
tagattgattcggttcggttttgaaccgaacccgacaaggtcggatacatttttggtttggttcggtttggactttcggttttgt |
46265460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 295
Target Start/End: Original strand, 27226938 - 27227089
Alignment:
| Q |
144 |
aaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggt |
243 |
Q |
| |
|
|||| |||||||| ||||| ||| |||| || | ||||| ||||||||||| | || || | |||||||| ||||| | ||||| |||| |||| | |
|
|
| T |
27226938 |
aaattaaaaaccaagaaccgaaccaaacaaggtcggtttagattggttcggttcggctttgatccaaaccagacaagatgggataccttttaagtttgtt |
27227037 |
T |
|
| Q |
244 |
tcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|| ||||||||||| ||||| | ||||||||||||| ||||||||||||| |
|
|
| T |
27227038 |
tcggtttggacttttgatttcatcggttttgtccgaacaacttacaccccta |
27227089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 11727403 - 11727445
Alignment:
| Q |
194 |
gattggtttcaaaccaaaccaaacaaggtcggatattttttcg |
236 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
11727403 |
gattggtttcaaaccgaaccaaacaaggtcatatattttttcg |
11727445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 2197639 - 2197716
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaacc |
155 |
Q |
| |
|
|||||||||||||||||| |||||| |||| |||||| ||| || ||| ||||| ||||||| |||||||||||| |
|
|
| T |
2197639 |
ggataatattagtaaaatggggagtgaagttagcatcggtttggttgatcggtttcttggatctcaaaatgaaaaacc |
2197716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 146; Significance: 2e-76; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 11 - 296
Target Start/End: Complemental strand, 35949101 - 35948826
Alignment:
| Q |
11 |
atggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtggttat |
110 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||| ||||||||||||||||| ||| ||||| |
|
|
| T |
35949101 |
atggattaaaaagtattttatgtttaattttgggcctaaccataagtttgtg--aggtaggataa--------tattagtaaaataaggaatgttgttat |
35949012 |
T |
|
| Q |
111 |
catcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaa |
210 |
Q |
| |
|
|||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||| | ||| || || ||||||| ||||||||||| | |
|
|
| T |
35949011 |
catcggattggttcatcggtttcatggatctcgaaatgaaaaaccatgaatcaaaccaaactagatcgattttgaatgattcggatcggtttcaaaccga |
35948912 |
T |
|
| Q |
211 |
accaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacccctac |
296 |
Q |
| |
|
||||||||| |||||||||||||| | ||||||||| |||||||||||| ||| ||| |||||||||||| ||||||||||||||| |
|
|
| T |
35948911 |
accaaacaaagtcggatatttttttgttttggttcaatttggactttcgttttcgttggttttgtccgaaacacttacacccctac |
35948826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 44223232 - 44223503
Alignment:
| Q |
7 |
gtgaatggattaaaaat-tattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtg |
105 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
44223232 |
gtgaatggattaaaaaagtattttatgtttaattttgggcctaaccataagtttgtgtgaggtaggataa--------tatttgtaaaataaggagtgtg |
44223323 |
T |
|
| Q |
106 |
gttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaa |
205 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||| ||||| || |
|
|
| T |
44223324 |
gttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaatcatgaaccaaaccaaactagattggtttcgattggttcagatcggttttaa |
44223423 |
T |
|
| Q |
206 |
accaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|| ||||||||||| || ||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
44223424 |
actgaaccaaacaagatcatatattttttcg----------gtttggactttcggtttcgttggttttgtccgaaccacttacaccccta |
44223503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 17722330 - 17722553
Alignment:
| Q |
19 |
aaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtagga-taaatggataatattagtaaaataaggagtgtggttatcatcgga |
117 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||||||||||| | ||| |||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
17722330 |
aaaattattttatgtttaattttgggcctaaccatgagtatgtgtgaggtaggaatttatg-ataatattagtaaagtaatgagtgtggttatcatcgga |
17722428 |
T |
|
| Q |
118 |
ttgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaac |
217 |
Q |
| |
|
||| |||||| ||||||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
17722429 |
ttggttcatcggtttcacagatctcgaaatgaaaaatcatgaaccaaaccaaactagatcggtttcgattagttcggattggtttcaaaccgaaccaaac |
17722528 |
T |
|
| Q |
218 |
aaggtcggatattttttcgatttgg |
242 |
Q |
| |
|
||||| |||||||||| || ||||| |
|
|
| T |
17722529 |
aaggttggatatttttccggtttgg |
17722553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 9 - 296
Target Start/End: Original strand, 7956248 - 7956517
Alignment:
| Q |
9 |
gaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtggtt |
108 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
7956248 |
gaatgtattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggat--------aatattagtaaaataaggagtatggtt |
7956339 |
T |
|
| Q |
109 |
atcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaacc |
208 |
Q |
| |
|
|||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||| || ||||||||||| |
|
|
| T |
7956340 |
atcatcggattggttcatcggtttcacatatctcaaaatgaaaaaccatgaaccaaaccaaactagatcggtttcgattggttcgaatcggtttcaaacc |
7956439 |
T |
|
| Q |
209 |
aaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacccctac |
296 |
Q |
| |
|
|||| || |||||||| ||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
7956440 |
aaacaaagcaaggtcgaatattttttcg----------gtttggactttcggtttcgttggttttgtccgaaccacttacacccctac |
7956517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 78 - 242
Target Start/End: Original strand, 3767625 - 3767789
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagatt |
177 |
Q |
| |
|
||||||||||| |||||| |||||| ||||| |||||| | | |||||| ||| ||||||| |||| ||||||| ||||||||| ||||||||| |
|
|
| T |
3767625 |
ggataatattactaaaatggggagtgaggttagcatcggttcggttcatcggttcattggatctcaaaataaaaaaccgagaaccaaaccaaactagatc |
3767724 |
T |
|
| Q |
178 |
ggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttgg |
242 |
Q |
| |
|
||||| ||||||||||| | ||||| |||| ||| ||||||||||||||| ||||||| ||||| |
|
|
| T |
3767725 |
ggtttagattggttcggttcggttttgaaccgaactaaacaaggtcggatactttttcggtttgg |
3767789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 78 - 228
Target Start/End: Original strand, 25456101 - 25456251
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagatt |
177 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||| |||| | | |||||||| |||| ||||||| |||||||||||| |||||||| |||| ||||| |
|
|
| T |
25456101 |
ggataataatagtaaaatggggagtgaggttagcatcagttcgattcatcggtttattggatctcaaaatgaaaaaccgataaccaaaccaaacaagatt |
25456200 |
T |
|
| Q |
178 |
ggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggata |
228 |
Q |
| |
|
||||| ||||| ||||| | ||||| ||| ||||| ||||||||||||| |
|
|
| T |
25456201 |
ggtttagattgattcggttcggttttgaactgaaccagacaaggtcggata |
25456251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 16570889 - 16571047
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| |||| ||||| | ||||| ||| ||| ||||| ||||| | |||||| || | ||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
16570889 |
ggatctcaaaattaaaaatcgagaacctaaccaaattagatcggtttaggttggtttggttcggttttgaaccaaaccaaacaaggttggatatttttt- |
16570987 |
T |
|
| Q |
236 |
gatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
| |||||||| ||||| | ||| ||||| | ||||||||| ||||| ||||||||||| |
|
|
| T |
16570988 |
ggtttggttcggtttgaatttttgatttcatcggttttgtccaaaccaattacaccccta |
16571047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 34760832 - 34760940
Alignment:
| Q |
135 |
cggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggata-ttttt |
233 |
Q |
| |
|
|||||||| |||| |||||||| ||||||||| ||||||||| ||||| | ||||||||| | | ||| |||| ||||||||||| || |||| ||||| |
|
|
| T |
34760832 |
cggatctcaaaatcaaaaaccaagaaccaaaccaaactagatcggtttaggttggttcggttcgattttgaaccgaaccaaacaagatcagatacttttt |
34760931 |
T |
|
| Q |
234 |
tcgatttgg |
242 |
Q |
| |
|
||| ||||| |
|
|
| T |
34760932 |
tcggtttgg |
34760940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 25344208 - 25344294
Alignment:
| Q |
205 |
aaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacc |
291 |
Q |
| |
|
|||||||||| ||||||||||||| |||| | |||| |||| |||| |||||| ||||| || ||||| |||||||| |||||||| |
|
|
| T |
25344208 |
aaccaaaccagacaaggtcggatacatttttggtttgattcaatttgaactttcaattttattggttttatccgaaccgcttacacc |
25344294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 25808254 - 25808368
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagatt |
177 |
Q |
| |
|
|||||||| || |||||| ||||||| ||||| |||||| | |||||||| |||| ||||||| |||||||||||| ||| ||||| ||| |||| |
|
|
| T |
25808254 |
ggataataatattaaaatgaggagtgaggttagcatcggttcgattcatcgatttcttggatctcaaaatgaaaaaccgagaatcaaaccaaaaaagatc |
25808353 |
T |
|
| Q |
178 |
ggtttcgattggttc |
192 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
25808354 |
ggtttagattggttc |
25808368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 25344101 - 25344177
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaac |
154 |
Q |
| |
|
|||||||| ||||||||| ||||||| ||||| |||||| | |||||||| ||||| | ||||| ||||||||||| |
|
|
| T |
25344101 |
ggataatagtagtaaaatgaggagtgaggttagcatcggttagattcatctgtttcttgaatctcaaaatgaaaaac |
25344177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 295
Target Start/End: Complemental strand, 32321950 - 32321799
Alignment:
| Q |
144 |
aaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggt |
243 |
Q |
| |
|
|||| ||||||| ||||| ||| ||| ||||| ||||| ||| ||||| ||| ||| ||||| ||||||||||||||| ||| ||||||| |||| | |
|
|
| T |
32321950 |
aaattaaaaaccgagaaccgaaccaaattagatcggtttatgttgattcggtttgtttttaaaccgaaccaaacaaggtcgaatactttttcggtttgat |
32321851 |
T |
|
| Q |
244 |
tcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
| |||| | ||||| ||| | |||||| |||||||||||| |||||||| |
|
|
| T |
32321850 |
ttggtttaggttttcggtttcatcagttttatccgaaccacttgcaccccta |
32321799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 9505101 - 9505015
Alignment:
| Q |
210 |
aaccaaacaaggtcggatatttttt-cgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
||||||||||||| ||||||||||| || ||||||| ||||||| ||||| ||| | ||||| ||| ||||||||||||||||| |
|
|
| T |
9505101 |
aaccaaacaaggttggatatttttttcgttttggttaggtttggattttcggtttcatcggttttatccaaaccacttacaccccta |
9505015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 9040570 - 9040513
Alignment:
| Q |
137 |
gatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcgg |
194 |
Q |
| |
|
|||||| |||||||||||| ||||||||| |||| |||| ||||| ||||||||||| |
|
|
| T |
9040570 |
gatctcaaaatgaaaaaccgagaaccaaaccaaacaagatcggtttagattggttcgg |
9040513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0879 (Bit Score: 143; Significance: 1e-74; HSPs: 1)
Name: scaffold0879
Description:
Target: scaffold0879; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 480 - 766
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtt------taattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataagga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
480 |
gtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtaggat--------aatattagtaaaataagga |
571 |
T |
|
| Q |
101 |
gtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggt |
200 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||| |
|
|
| T |
572 |
gtgtggttatcatcggattggttcatcggtttcacggatctcaaaatgaaaaaccatgaaccaaatcaaactagatcggtttcaattggttcggatcggt |
671 |
T |
|
| Q |
201 |
ttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||| ||||||||||| || ||||||||||| |||||| ||||||||| ||| ||| ||| |||| ||| |||||||||||||||||| |
|
|
| T |
672 |
ttcaaaccgaaccaaacaagatcagatattttttcagtttggtctggtttggactatcggtttcgttggtttagtctgaaccacttacaccccta |
766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 142; Significance: 4e-74; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 7 - 293
Target Start/End: Original strand, 13852175 - 13852453
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | ||||| | ||||||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
13852175 |
gtgaatggattaaaaaatattttatgtttaattttggtcataaccttaagtttgtgtgaggtaagataa--------tattaataaaataaggagtgtgg |
13852266 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
|||||| | ||||| |||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||| |||||||| |||| ||||||||| |
|
|
| T |
13852267 |
ttatcaacagattggttcatcggtttcacggatctcaaaatgaaaaactatgaaccaaaccaaactagatcggttttgattggtttggatcggtttcaaa |
13852366 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacccc |
293 |
Q |
| |
|
|| || ||||||| ||| |||||||||| |||||| |||| |||||||||||||||| ||| ||||||||||||| ||||||||||| |
|
|
| T |
13852367 |
ccgaatcaaacaaagtcagatatttttttgatttgattcaatttggactttcgatttcgttggttttgtccgaactacttacacccc |
13852453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 7 - 295
Target Start/End: Complemental strand, 31111693 - 31111413
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
||||||| |||||||| |||||||| |||||||||| |||||||||| | ||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
31111693 |
gtgaatgaattaaaaagtattttatatttaattttgcgcctaaccataattttgtgtgaggtaggataa--------tattagtaaaataagaagtgtgg |
31111602 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
|||||| | ||||| || ||| |||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||| |||||||| ||| |||||||| |
|
|
| T |
31111601 |
ttatcaccagattggtttatcggtttcaaggatctcaaaatgaaaaaccatgaaccaaaccaaactagatcggtttcaattggttcagatcagtttcaaa |
31111502 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||||||| |||||| ||||| ||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
31111501 |
ccgaaccaaacaaggtcggatattttttcggtttggttcaatttggattttcggtttcgttgattttgtctaaaccacttacaccccta |
31111413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 36009447 - 36009222
Alignment:
| Q |
7 |
gtgaatggattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtgg |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
36009447 |
gtgaatggattaaaaattattttatgtttaattttggacctaaccatgaatttgtgtaaggtagaaatgtaggataatattagtaaaataaggagtgtgg |
36009348 |
T |
|
| Q |
107 |
ttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaa |
206 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||| ||| ||||||||| |
|
|
| T |
36009347 |
ttatcatcggattgattcatcggtttcatggatctcgaaatgaaaaaccatgaaccaaaccaaactag----------attgattcagatcggtttcaaa |
36009258 |
T |
|
| Q |
207 |
ccaaaccaaacaaggtcggatattttttcgatttgg |
242 |
Q |
| |
|
|| ||| ||||||| |||||||||||||| |||||| |
|
|
| T |
36009257 |
ccgaactaaacaagatcggatattttttcaatttgg |
36009222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 78 - 242
Target Start/End: Complemental strand, 4638375 - 4638207
Alignment:
| Q |
78 |
ggataatattagtaaaa----taaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaacta |
173 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
4638375 |
ggataatattagtaaaagaattaaggagtgtggttatcatcggattggttcatcggtttcacggatctcaaaatgaaaaaccatgaaccaaaccaaacta |
4638276 |
T |
|
| Q |
174 |
gattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttgg |
242 |
Q |
| |
|
|| || | ||||||||||||| | ||||||||| |||| |||||||||||||||||||||| ||||| |
|
|
| T |
4638275 |
aatcagtattgattggttcggatcgatttcaaaccgaaccgaacaaggtcggatattttttcggtttgg |
4638207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 136 - 295
Target Start/End: Original strand, 29109189 - 29109348
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| |||| ||||||| ||||||||| ||||||||||||||| | ||| ||||| | ||||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
29109189 |
ggatctcaaaattaaaaaccgagaaccaaaccaaactagattggtttaggttgcttcggttcggttttgaactgaaccaaacaaggtcggataatttttc |
29109288 |
T |
|
| Q |
236 |
gatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||| ||||||| |||| ||| | |||||||||||||||||||||||||||| |
|
|
| T |
29109289 |
agtttggttcggtttggattttcagtttcatcagttttgtccgaaccacttacaccccta |
29109348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 178 - 296
Target Start/End: Original strand, 12893982 - 12894100
Alignment:
| Q |
178 |
ggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtcc |
277 |
Q |
| |
|
||||| ||||||||||| || |||| |||| ||||||||||||||||||| |||| | |||||||||||||||||||| ||||| ||| |||||||| |
|
|
| T |
12893982 |
ggtttagattggttcggttttgttttgaaccgaaccaaacaaggtcggatacatttttggtttggttcagtttggacttttgatttcgttggttttgtct |
12894081 |
T |
|
| Q |
278 |
gaaccacttacacccctac |
296 |
Q |
| |
|
|||||||| |||||||||| |
|
|
| T |
12894082 |
gaaccactcacacccctac |
12894100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 297
Target Start/End: Original strand, 3919883 - 3920043
Alignment:
| Q |
137 |
gatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcg |
236 |
Q |
| |
|
|||||| |||| ||||| | ||||||||| ||||||||| ||||| | ||||||||| | ||||| ||||||||||||||| |||| || ||||||| |
|
|
| T |
3919883 |
gatctcaaaattaaaaattaagaaccaaaccaaactagatcggtttagtttggttcggttcggttttgaaccaaaccaaacaaagtcgaatgctttttcg |
3919982 |
T |
|
| Q |
237 |
atttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacccctacc |
297 |
Q |
| |
|
|||| ||||||||| | ||| | ||| || ||||||| | ||||| ||||| ||||||| |
|
|
| T |
3919983 |
gtttgattcagtttgaattttaggtttcattggttttgttccaaccagttacatccctacc |
3920043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 78 - 242
Target Start/End: Complemental strand, 38607183 - 38607020
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagatt |
177 |
Q |
| |
|
|||||| ||||||||||| ||||||||||| |||| || | |||||| |||| | ||||||| ||||||||||||| ||||| ||| |||| || | |
|
|
| T |
38607183 |
ggataacattagtaaaatggcgagtgtggttagcatcaaatcggttcatcggttttatggatctcaaaatgaaaaaccaagaaccgaaccaaacaaggtc |
38607084 |
T |
|
| Q |
178 |
ggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttgg |
242 |
Q |
| |
|
|||| ||||||||||| | ||||| || | || ||||||||||||||||| |||||| ||||| |
|
|
| T |
38607083 |
agtttagattggttcggttcggttttgaatcgaa-caaacaaggtcggatatattttcggtttgg |
38607020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 291
Target Start/End: Complemental strand, 5526375 - 5526221
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| |||| |||||| ||||| ||| ||||||||| ||||| | |||||||| | |||| |||| ||| ||||||||||||||| ||||| |
|
|
| T |
5526375 |
ggatctcaaaattaaaaactgagaaccgaaccaaactagatcggtttaggttggttcgt-tcagttttgaaccgaacaaaacaaggtcggatacgttttc |
5526277 |
T |
|
| Q |
236 |
gatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacacc |
291 |
Q |
| |
|
| ||||||| | |||||| ||||||||| || |||||||||| |||||||||||| |
|
|
| T |
5526276 |
ggtttggtttaatttggattttcgatttctttggttttgtccggaccacttacacc |
5526221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 35954840 - 35954886
Alignment:
| Q |
204 |
aaaccaaaccaaacaaggtcggatattttttcgatttggttcagttt |
250 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||| ||| |||| |
|
|
| T |
35954840 |
aaaccaaacaaaacaaggtcggatactttttcgatttgattcggttt |
35954886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 30906943 - 30907028
Alignment:
| Q |
210 |
aaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
||||||||||||||| | | ||||| | ||||||||||| |||| ||||| ||| | |||||||| ||||||||||||||||| |
|
|
| T |
30906943 |
aaccaaacaaggtcgaaaacttttttggtttggttcagtctggattttcggtttcatcgattttgtccaaaccacttacaccccta |
30907028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 126; Significance: 2e-64; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 34 - 295
Target Start/End: Complemental strand, 46655768 - 46655514
Alignment:
| Q |
34 |
ttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttc |
133 |
Q |
| |
|
||||||||| |||||||||| | ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||| ||||| |
|
|
| T |
46655768 |
ttaattttgggcctaaccataaatttgtgtgaggtaggataa--------tattagtaaaataagaagtgtggttatcattggattggttcatcggtttc |
46655677 |
T |
|
| Q |
134 |
acggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatatt-tt |
232 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||||||||||| || |
|
|
| T |
46655676 |
acggatctcgaaatgaaaaagcatgaaccaaaccaaactagattggttttgattggttcggatcggtttcaaaccgaaccaagtaaggtcggatattttt |
46655577 |
T |
|
| Q |
233 |
ttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|| | ||||||| ||| ||| ||||||||| ||| | ||| |||||||||||| |||||||| |
|
|
| T |
46655576 |
tttggtttggtttggttcggattttcgatttcgttggatttatccgaaccacttgcaccccta |
46655514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 144 - 292
Target Start/End: Complemental strand, 44471168 - 44471020
Alignment:
| Q |
144 |
aaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggt |
243 |
Q |
| |
|
|||| |||||||| ||||| ||| ||||||||| ||||| |||||||| || | ||||| |||| ||| ||||||||||||||| |||||| |||||| |
|
|
| T |
44471168 |
aaattaaaaaccaagaaccgaaccaaactagatcggtttagattggtttggttcggttttgaaccgaactaaacaaggtcggatacattttcggtttggt |
44471069 |
T |
|
| Q |
244 |
tcagtttggactttcgattttgttagttttgtccgaaccacttacaccc |
292 |
Q |
| |
|
|| ||||||| ||||||||| | |||||||||||||||||||||||| |
|
|
| T |
44471068 |
tcggtttggattttcgatttcatcggttttgtccgaaccacttacaccc |
44471020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 78 - 258
Target Start/End: Original strand, 11503295 - 11503475
Alignment:
| Q |
78 |
ggataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagatt |
177 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||| ||| || | | || ||| ||||| ||||||| |||||||||| | ||||||||| ||| |||| |
|
|
| T |
11503295 |
ggataataatagtaaaatggggagtgaggttagcatgggttcggtttatcggtttcttggatctcaaaatgaaaaatcgagaaccaaaccaaataagatc |
11503394 |
T |
|
| Q |
178 |
ggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttc |
258 |
Q |
| |
|
||||||||||||||||| | ||||| |||| |||| ||||||||||||| |||| | |||||||| |||||||||||| |
|
|
| T |
11503395 |
ggtttcgattggttcggttcggttttgaaccttaccagacaaggtcggatacatttttggtttggttcggtttggactttc |
11503475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 295
Target Start/End: Complemental strand, 26757752 - 26757593
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| |||| |||| ||| ||||| ||| || ||| || | ||| | ||||||||| | |||| |||| ||||||||||| |||| ||| |||||| |
|
|
| T |
26757752 |
ggatctcaaaattaaaatccaagaaccgaaccaatctatatcgatttaggttggttcggttcagttttaaactaaaccaaacaacgtcgaatactttttc |
26757653 |
T |
|
| Q |
236 |
gatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
||||| ||| |||||| ||||||||| || ||||||||| ||||||||||||||||| |
|
|
| T |
26757652 |
gattttgtttgatttggattttcgatttcattggttttgtccaaaccacttacaccccta |
26757593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 46892715 - 46892648
Alignment:
| Q |
184 |
gattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttg |
251 |
Q |
| |
|
|||||||| || | ||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
46892715 |
gattggtttggttcggttttaaaccgaaccaaacaaggtcggatattttttcggtttggttcggtttg |
46892648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 27524128 - 27524046
Alignment:
| Q |
184 |
gattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgt |
266 |
Q |
| |
|
|||||||| || ||||||| | || ||||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
27524128 |
gattggtttggtttggttttgatccgaaccaaacaaggtcgaataccttttcggtttggtttagtttggactttcgattttgt |
27524046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 295
Target Start/End: Original strand, 30554588 - 30554725
Alignment:
| Q |
158 |
gaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggacttt |
257 |
Q |
| |
|
||||| ||| ||||||||| ||||| ||||||||||| | | ||| |||| ||| ||||||||||||||| ||||||| ||| | || |||||| ||| |
|
|
| T |
30554588 |
gaaccgaaccaaactagatcggtttagattggttcggttcgattttgaaccgaactaaacaaggtcggatactttttcggtttagctcgatttggatttt |
30554687 |
T |
|
| Q |
258 |
cgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|| ||| | |||||| ||||||| ||||||||||| |
|
|
| T |
30554688 |
cggtttcatcgattttgttcgaaccatttacaccccta |
30554725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0565 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0565
Description:
Target: scaffold0565; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 80 - 241
Target Start/End: Original strand, 1815 - 1976
Alignment:
| Q |
80 |
ataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattgg |
179 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||||| ||| ||||| | |
|
|
| T |
1815 |
ataatattagtaaaataaggagtgttgttatcatcggattggttcatcggtttcacgaatctcgaaattaaaaaccatgaaccaaaccaaagtagatcag |
1914 |
T |
|
| Q |
180 |
tttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttg |
241 |
Q |
| |
|
||| ||||||||| ||| | ||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
1915 |
ttttgattggttccgatcgatttcaaaccgaaccaaacaaggtcggatattttttcaatttg |
1976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 33819 - 33729
Alignment:
| Q |
205 |
aaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||||| |||||||| |||| |||||| ||||||||| ||||||||||| ||| || ||||| ||||||||||||||||||||| |
|
|
| T |
33819 |
aaccaaaccagacaaggtcagatacattttcggtttggttcaatttggactttcagtttcattggttttatccgaaccacttacaccccta |
33729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 13961 - 13847
Alignment:
| Q |
80 |
ataatattagtaaaataaggagtgtggttatcatcggattgattcatcagtttcacggatctcgaaatgaaaaaccatgaaccaaactaaactagattgg |
179 |
Q |
| |
|
|||||| ||||||||| |||||| ||||| |||||| | |||||||| |||| ||||||| |||||||||||| |||||||| ||| |||| | |
|
|
| T |
13961 |
ataataatagtaaaatggggagtgaggttagcatcggttcgattcatcggtttattggatctcaaaatgaaaaaccgataaccaaaccaaataagatcag |
13862 |
T |
|
| Q |
180 |
tttcgattggttcgg |
194 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
13861 |
tttagattggttcgg |
13847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0564 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0564
Description:
Target: scaffold0564; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 6387 - 6311
Alignment:
| Q |
219 |
aggtcggatattttttcgatttggttcagtttggactttcgattttgttagttttgtccgaaccacttacaccccta |
295 |
Q |
| |
|
|||||||||| ||||||| ||| |||||||||||| |||| ||||| | |||||||||||| |||||| ||||||| |
|
|
| T |
6387 |
aggtcggatactttttcggtttagttcagtttggattttcaattttatcggttttgtccgaatcacttataccccta |
6311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000008; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 11846399 - 11846296
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| |||| ||||||| ||||| ||| ||||||||| ||||| ||||||| | | ||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
11846399 |
ggatctcaaaattaaaaaccgagaaccgaaccaaactagatcggtttaagttggttcagttcggttttgaaccaaaccaaacaaggtcggatacattttc |
11846300 |
T |
|
| Q |
236 |
gatt |
239 |
Q |
| |
|
|||| |
|
|
| T |
11846299 |
gatt |
11846296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 23301570 - 23301455
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| |||| |||||| ||||| ||| ||||||||| |||| | ||||||||| | ||||| |||| ||||||||||||||| || |||||| |
|
|
| T |
23301570 |
ggatctcaaaattaaaaactgagaaccgaaccaaactagatcagtttaggttggttcggttcggttttgaaccgaaccaaacaaggtcgaattatttttc |
23301471 |
T |
|
| Q |
236 |
gatttggttcagtttg |
251 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
23301470 |
ggtttggttcagtttg |
23301455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 292
Target Start/End: Original strand, 7176529 - 7176662
Alignment:
| Q |
159 |
aaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttcgatttggttcagtttggactttc |
258 |
Q |
| |
|
|||| ||| ||||||||| ||||| | ||||||||| | | ||| |||||||||||||||||| ||||| ||||||| ||||||| ||| | |||| |
|
|
| T |
7176529 |
aaccgaaccaaactagatcggtttaggttggttcggttcgattttgaaccaaaccaaacaaggttggatactttttcgggttggttcggttagagttttc |
7176628 |
T |
|
| Q |
259 |
gattttgttagttttgtccgaaccacttacaccc |
292 |
Q |
| |
|
| ||| | |||||||||||| ||||||||||| |
|
|
| T |
7176629 |
ggtttcatcggttttgtccgaaacacttacaccc |
7176662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 251
Target Start/End: Complemental strand, 23300584 - 23300469
Alignment:
| Q |
136 |
ggatctcgaaatgaaaaaccatgaaccaaactaaactagattggtttcgattggttcggattggtttcaaaccaaaccaaacaaggtcggatattttttc |
235 |
Q |
| |
|
||||||| |||| ||||||| ||||| ||||||||||||| |||| | ||||||||| | |||| |||| ||||||||||||||| | |||||| |
|
|
| T |
23300584 |
ggatctcaaaattaaaaaccgagaaccgaactaaactagatcagtttaggttggttcggttcagttttgaaccgaaccaaacaaggtcgatttctttttc |
23300485 |
T |
|
| Q |
236 |
gatttggttcagtttg |
251 |
Q |
| |
|
| |||||||| ||||| |
|
|
| T |
23300484 |
ggtttggttcggtttg |
23300469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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