View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16231_low_21 (Length: 252)
Name: NF16231_low_21
Description: NF16231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16231_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 19310196 - 19309961
Alignment:
| Q |
1 |
aaattttcatattttagttccacataaaaagtaaatccctttttgtccactagaattttatagcataatcgttgttgaagatccatgtccacaagcactc |
100 |
Q |
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| T |
19310196 |
aaattttcatattttagttccacataaaaagtaaatccctttctgtccactagaattttatagcataattgttgttgaagatccatgtccacaagcactc |
19310097 |
T |
|
| Q |
101 |
tcacatactggccaaatgtcctatcaaattttgacctagtagtagcatcatatgtacatgttggagtaccaaaattgctagcaattgaaaaaatgatctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19310096 |
tcacatactggccaaatgtcctatcaaattttgacctagtagtagcatcatatgtacatgttggagtaccaaaattgctagcaattgaaaaaatgatctt |
19309997 |
T |
|
| Q |
201 |
tggcctccaatattcttgagagatgccatatatttt |
236 |
Q |
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|||||||||||||||||||||||||||||| ||||| |
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| T |
19309996 |
tggcctccaatattcttgagagatgccatagatttt |
19309961 |
T |
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