View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16231_low_30 (Length: 208)
Name: NF16231_low_30
Description: NF16231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16231_low_30 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 2834889 - 2835063
Alignment:
| Q |
16 |
aaaataccttttaactcgtataaatatgttacttttgtagcatactttataatgcaagcatgtctaaaacagatacaacacaaaccaattgttccactac |
115 |
Q |
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| T |
2834889 |
aaaatactttttaactcgtataaatatgttacttttgtagcatactttataatgcaagcatgtctaaaacagatagaacacaaaccaattgttccactac |
2834988 |
T |
|
| Q |
116 |
attatttgagctacttacggaaatgaagaaccattccagcatagaacaaacaaatattcaaccaaaatcaccatc |
190 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2834989 |
attatttgagctacttacggaaatgaagaaccattccagcatagaacaaacaaatattcaaccaaaatcaccatc |
2835063 |
T |
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