View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16232_high_20 (Length: 265)
Name: NF16232_high_20
Description: NF16232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16232_high_20 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 4403394 - 4403631
Alignment:
| Q |
18 |
tcttctgatcactgatgtgtgttacccatcatattatagtttgctacgttagatttttggctaattgaaatagtcatgcgtgaaatccaatccaagaagg |
117 |
Q |
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| T |
4403394 |
tcttctgatcactgatgtgtgttacccatcatattatagtttgctacgttagatttttggctaattgaaatagtcatgcgtgaaatccaatccaagaagg |
4403493 |
T |
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| Q |
118 |
aaaaaattagattagaaaagaaagcgtgattaatcaatcaatgtagctcacacaaaagtgcaattagatcggggatgatttgatttgttcatcaatttct |
217 |
Q |
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| T |
4403494 |
aaaaaattagattagaaaagaaagcgtgattaatcaatcaatgtagctcacacaaaagtgcaattagatcggggatgatttgatttgttcatcaatttct |
4403593 |
T |
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| Q |
218 |
attacaagaattcatgcagctgttaattatagcctttg |
255 |
Q |
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| T |
4403594 |
attacaagatttcatgcagctgttaattatagcctttg |
4403631 |
T |
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