View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16232_high_26 (Length: 226)
Name: NF16232_high_26
Description: NF16232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16232_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 35831590 - 35831783
Alignment:
| Q |
18 |
caaacttacccagttcacaaggagaccttgttcttcagagtacggtagttttccagaaatgatttcaagcaataatattccaaagttataaacatcggtt |
117 |
Q |
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| T |
35831590 |
caaacttacccagttcacaaggagaccttgttcttcagagtacggtagttttccagaaatgatttcaagcaataatattccaaagttataaacatcggtt |
35831689 |
T |
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| Q |
118 |
tcaggaccttggtggggtggcaactcagatttctttgattcatcgccaactgtgctggctggtgataatccgttactgccaaaactgatctctg |
211 |
Q |
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| T |
35831690 |
tcaggaccttggtggggtggcaactcagatttctttgattcatcgccaactgtgctggctggtgataatccgttactgccaaaactgatctctg |
35831783 |
T |
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