View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16232_low_24 (Length: 286)
Name: NF16232_low_24
Description: NF16232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16232_low_24 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 16 - 286
Target Start/End: Original strand, 32269871 - 32270142
Alignment:
| Q |
16 |
aatatgaaattcaaccacagtaccataaatcttctttctaaaaatttctacaaaccaatatatcgtattccttttgttagggttaaataatgttttccct |
115 |
Q |
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| T |
32269871 |
aatatgaaattcaaccacagtaccataaatcttctttctaaaaatttatacaaaccaatatatcatattcctttttttagggttaaataatgttttccct |
32269970 |
T |
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| Q |
116 |
gctatttagacgggttttgatctattttgtaaaata-nnnnnnnnnagattccaccaaaatatattcaaatggcaagggtgaaatctaaagaatattcga |
214 |
Q |
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| T |
32269971 |
gctatttagacgggttttgatctattttgtaaaatatattttttttagattccaccaaaatatattcaaatcgcaagggtgaaatctaaagaatattcga |
32270070 |
T |
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| Q |
215 |
atggtaaggggaaattaaaaaatatatactttacaaagggtaaaacaaaatagcatggggtaaatattatat |
286 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
32270071 |
atggtaaggggaaattaaaatatatatactttacaaagggtaaaacaaaatagtatggggtaaatattatat |
32270142 |
T |
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