View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16232_low_6 (Length: 526)
Name: NF16232_low_6
Description: NF16232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16232_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 491; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 16 - 518
Target Start/End: Original strand, 40271531 - 40272033
Alignment:
| Q |
16 |
ttatagaccgtttgattgaaattgaacctgaagaaatggagtggcagttgttgaaggcgaatatgtatatctacaacgacgaccatgaatctgctaagaa |
115 |
Q |
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| T |
40271531 |
ttatagaccgtttgattgaaattgaacctgaagaaatggagtggcggttgttgaaggcgaatatgtatatctacaacgacgaccatgaatctgctaagaa |
40271630 |
T |
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| Q |
116 |
attgtttgaagagattttgaagaaagatccacttcgagttgaagcttttcatggacttgtaatggcgagttctgaatcgaatgaacaatcggatgaacct |
215 |
Q |
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| T |
40271631 |
attgtttgaagagattttgaagaaagatccacttcgagttgaagcttttcatggacttgtaatggcgagttctgaatcgaatgaacaatcggatgaacct |
40271730 |
T |
|
| Q |
216 |
ttgaaaggattgttgaagagagttgaaaaagcaatggagttgtgcaagaaacagaagaaggtttcggatgttagggattttaggttattggttgctcaga |
315 |
Q |
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| T |
40271731 |
ttgaaaggattgttgaagagagttgaaaaagcaatggagttgtgcaagaaacagaagaaggtttcggatgttagggattttaggttattggttgctcaga |
40271830 |
T |
|
| Q |
316 |
ttaaggtgatggaagggaatttttcagaggcgcttaaagcttatcaggatttggtgaaagaagaacctagagattttaggccttatctgtgtcagggtat |
415 |
Q |
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| T |
40271831 |
ttaaggtgatggaagggaatttttcagaggcgcttaaagcttatcaggatttggtgaaagaagaacctagagattttaggccttatctgtgtcagggtat |
40271930 |
T |
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| Q |
416 |
tatatatacattgcttagaaagaaagatgaagcggagaagcaattcgatcagttccggaagcttgtcccgaagaatcatccttataaagagtattttgat |
515 |
Q |
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| T |
40271931 |
tatatatacattgcttagaaagaaagatgaagccgagaagcaattcgatcagttccgaaagcttgtcccgaagaatcatccttataaagagtattttgat |
40272030 |
T |
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| Q |
516 |
gat |
518 |
Q |
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| T |
40272031 |
gat |
40272033 |
T |
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