View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16233_low_11 (Length: 274)

Name: NF16233_low_11
Description: NF16233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16233_low_11
NF16233_low_11
[»] chr3 (46 HSPs)
chr3 (1-231)||(13657734-13657965)
chr3 (1-55)||(17579761-17579815)
chr3 (1-52)||(48517931-48517982)
chr3 (1-55)||(10820237-10820291)
chr3 (1-71)||(13712339-13712409)
chr3 (1-55)||(26997503-26997557)
chr3 (1-54)||(7515677-7515730)
chr3 (1-54)||(25147139-25147192)
chr3 (1-54)||(47220520-47220573)
chr3 (4-56)||(11218399-11218451)
chr3 (1-60)||(43122897-43122956)
chr3 (4-71)||(47220227-47220294)
chr3 (4-66)||(3750603-3750665)
chr3 (1-55)||(17580100-17580154)
chr3 (1-55)||(33623390-33623444)
chr3 (1-54)||(8112544-8112597)
chr3 (1-54)||(52212028-52212081)
chr3 (1-53)||(8112844-8112896)
chr3 (4-55)||(26997446-26997497)
chr3 (4-55)||(29777260-29777311)
chr3 (1-55)||(33623098-33623153)
chr3 (1-52)||(50293867-50293918)
chr3 (1-55)||(1771997-1772051)
chr3 (1-55)||(7515415-7515469)
chr3 (1-55)||(10820468-10820522)
chr3 (1-55)||(11218305-11218359)
chr3 (1-71)||(11871395-11871465)
chr3 (1-59)||(17580040-17580098)
chr3 (1-55)||(43122607-43122661)
chr3 (1-54)||(11218079-11218132)
chr3 (1-81)||(26997186-26997267)
chr3 (1-54)||(48382272-48382325)
chr3 (1-54)||(48518289-48518342)
chr3 (1-53)||(37148194-37148246)
chr3 (1-56)||(54924117-54924170)
chr3 (1-44)||(11871671-11871714)
chr3 (4-55)||(13712048-13712099)
chr3 (1-52)||(29231083-29231134)
chr3 (1-71)||(13658203-13658273)
chr3 (1-55)||(24098273-24098327)
chr3 (1-58)||(10820294-10820351)
chr3 (1-58)||(13712279-13712336)
chr3 (1-54)||(29231141-29231192)
chr3 (1-54)||(52211968-52212021)
chr3 (1-58)||(54924057-54924114)
chr3 (15-55)||(10820513-10820553)
[»] chr4 (46 HSPs)
chr4 (119-231)||(49178463-49178575)
chr4 (1-71)||(21956023-21956093)
chr4 (1-63)||(7632830-7632892)
chr4 (1-55)||(14336932-14336986)
chr4 (1-55)||(32751124-32751178)
chr4 (1-80)||(34979470-34979550)
chr4 (1-55)||(13846612-13846666)
chr4 (1-71)||(21956401-21956471)
chr4 (1-55)||(35779017-35779071)
chr4 (1-66)||(18598196-18598261)
chr4 (2-55)||(25154832-25154885)
chr4 (5-58)||(40289734-40289787)
chr4 (1-54)||(55358569-55358622)
chr4 (3-55)||(26553988-26554040)
chr4 (1-55)||(15631678-15631732)
chr4 (1-55)||(18598569-18598623)
chr4 (1-55)||(40998462-40998516)
chr4 (1-55)||(41898365-41898419)
chr4 (1-55)||(41898425-41898479)
chr4 (1-55)||(46430014-46430068)
chr4 (1-63)||(53856776-53856838)
chr4 (1-55)||(25363592-25363648)
chr4 (1-57)||(50523134-50523190)
chr4 (15-54)||(13864160-13864199)
chr4 (1-55)||(5322517-5322571)
chr4 (1-55)||(20421137-20421191)
chr4 (1-71)||(29031265-29031335)
chr4 (1-71)||(29043384-29043454)
chr4 (1-55)||(32751323-32751377)
chr4 (1-55)||(40998124-40998178)
chr4 (1-55)||(41898135-41898189)
chr4 (1-55)||(53856485-53856539)
chr4 (1-54)||(3253492-3253545)
chr4 (14-71)||(40289351-40289408)
chr4 (1-54)||(41898195-41898248)
chr4 (1-60)||(14966461-14966520)
chr4 (1-60)||(41511315-41511374)
chr4 (1-71)||(13870368-13870437)
chr4 (1-55)||(14336701-14336755)
chr4 (1-55)||(14336872-14336926)
chr4 (1-55)||(15631339-15631393)
chr4 (1-55)||(26553926-26553980)
chr4 (1-55)||(32751383-32751437)
chr4 (5-55)||(50523076-50523126)
chr4 (1-55)||(52851189-52851238)
chr4 (6-55)||(9860961-9861010)
[»] chr8 (67 HSPs)
chr8 (1-55)||(6121523-6121577)
chr8 (1-80)||(29276610-29276690)
chr8 (1-71)||(28463805-28463875)
chr8 (1-55)||(31827187-31827241)
chr8 (1-54)||(9117519-9117572)
chr8 (1-54)||(22780077-22780130)
chr8 (2-55)||(44728125-44728178)
chr8 (1-60)||(27702633-27702692)
chr8 (1-55)||(4157593-4157647)
chr8 (1-55)||(9779172-9779226)
chr8 (1-71)||(23404115-23404185)
chr8 (1-55)||(24469503-24469557)
chr8 (1-55)||(29218360-29218414)
chr8 (1-55)||(35435617-35435671)
chr8 (1-85)||(2251086-2251171)
chr8 (6-58)||(22444986-22445038)
chr8 (1-60)||(2250719-2250778)
chr8 (1-71)||(1043638-1043708)
chr8 (1-55)||(15315406-15315460)
chr8 (1-55)||(15495775-15495829)
chr8 (1-55)||(24043747-24043801)
chr8 (1-55)||(31826849-31826903)
chr8 (1-71)||(44318515-44318585)
chr8 (1-54)||(11482712-11482765)
chr8 (2-55)||(15891587-15891640)
chr8 (1-58)||(29276693-29276750)
chr8 (7-59)||(11482658-11482710)
chr8 (1-65)||(29457124-29457188)
chr8 (4-52)||(31618739-31618787)
chr8 (4-55)||(6953-7004)
chr8 (1-55)||(9117578-9117632)
chr8 (1-71)||(15315100-15315169)
chr8 (1-55)||(15315175-15315229)
chr8 (1-71)||(15495469-15495538)
chr8 (1-55)||(15495544-15495598)
chr8 (1-71)||(22444604-22444674)
chr8 (1-55)||(38507078-38507132)
chr8 (1-54)||(42691913-42691966)
chr8 (1-60)||(2257065-2257124)
chr8 (1-60)||(2257432-2257491)
chr8 (28-71)||(11482396-11482439)
chr8 (1-71)||(15300581-15300652)
chr8 (1-71)||(15480950-15481021)
chr8 (187-230)||(16929255-16929298)
chr8 (16-55)||(26062374-26062413)
chr8 (4-55)||(31618373-31618424)
chr8 (1-55)||(42620814-42620869)
chr8 (1-55)||(7184-7238)
chr8 (1-71)||(1043944-1044014)
chr8 (1-55)||(1691903-1691957)
chr8 (1-55)||(6121885-6121939)
chr8 (1-55)||(9117749-9117803)
chr8 (1-55)||(9117809-9117863)
chr8 (1-55)||(15891647-15891701)
chr8 (1-55)||(15891818-15891872)
chr8 (1-63)||(15891878-15891940)
chr8 (1-55)||(23275396-23275450)
chr8 (1-55)||(23275456-23275510)
chr8 (1-55)||(23403825-23403879)
chr8 (1-71)||(29276916-29276986)
chr8 (1-55)||(35435387-35435441)
chr8 (1-55)||(38507308-38507362)
chr8 (1-58)||(4157820-4157877)
chr8 (1-38)||(9778958-9778995)
chr8 (1-58)||(22444921-22444978)
chr8 (1-58)||(29457191-29457248)
chr8 (14-54)||(38169746-38169786)
[»] chr5 (37 HSPs)
chr5 (1-55)||(42092260-42092314)
chr5 (1-71)||(18008495-18008565)
chr5 (1-55)||(39804951-39805005)
chr5 (1-58)||(2796727-2796784)
chr5 (1-55)||(8943243-8943297)
chr5 (1-55)||(21250635-21250689)
chr5 (1-71)||(27319049-27319119)
chr5 (1-58)||(2802888-2802945)
chr5 (1-54)||(29440325-29440378)
chr5 (1-53)||(6641813-6641865)
chr5 (1-79)||(42091986-42092065)
chr5 (1-55)||(5361529-5361583)
chr5 (1-55)||(6642102-6642156)
chr5 (1-71)||(21250257-21250327)
chr5 (1-55)||(26006384-26006437)
chr5 (1-55)||(28574708-28574762)
chr5 (1-58)||(1737679-1737736)
chr5 (4-65)||(8942871-8942932)
chr5 (1-54)||(10223468-10223521)
chr5 (1-54)||(20429621-20429674)
chr5 (1-58)||(42375432-42375489)
chr5 (4-55)||(2796993-2797044)
chr5 (12-55)||(5360534-5360576)
chr5 (4-55)||(27495897-27495948)
chr5 (1-55)||(42375797-42375851)
chr5 (1-58)||(29440120-29440177)
chr5 (4-55)||(2803154-2803205)
chr5 (4-55)||(28571055-28571106)
chr5 (1-55)||(6642042-6642096)
chr5 (1-55)||(17849752-17849806)
chr5 (1-55)||(35171765-35171819)
chr5 (1-55)||(39805011-39805065)
chr5 (5-54)||(1069067-1069116)
chr5 (2-55)||(18008193-18008246)
chr5 (14-71)||(27496170-27496227)
chr5 (1-42)||(40807768-40807809)
chr5 (11-55)||(30103122-30103166)
[»] chr2 (42 HSPs)
chr2 (1-71)||(34334530-34334600)
chr2 (1-54)||(33616046-33616099)
chr2 (1-55)||(5482888-5482942)
chr2 (1-71)||(45638060-45638130)
chr2 (1-80)||(30823675-30823755)
chr2 (4-55)||(4603786-4603837)
chr2 (1-60)||(30512962-30513021)
chr2 (4-55)||(45638370-45638421)
chr2 (1-55)||(1844538-1844592)
chr2 (1-54)||(11973937-11973990)
chr2 (1-71)||(5483179-5483249)
chr2 (1-55)||(7438477-7438531)
chr2 (1-71)||(7881969-7882039)
chr2 (1-55)||(15286112-15286166)
chr2 (1-55)||(15787029-15787083)
chr2 (1-71)||(28238808-28238877)
chr2 (1-55)||(29683593-29683647)
chr2 (1-55)||(44436435-44436489)
chr2 (1-65)||(28182432-28182496)
chr2 (1-65)||(28238438-28238502)
chr2 (1-71)||(1039179-1039249)
chr2 (1-55)||(5247991-5248045)
chr2 (180-230)||(26737794-26737844)
chr2 (1-71)||(30513197-30513267)
chr2 (1-55)||(30823347-30823401)
chr2 (1-55)||(30851078-30851132)
chr2 (1-71)||(35125342-35125412)
chr2 (1-55)||(40343734-40343788)
chr2 (1-55)||(43865369-43865423)
chr2 (1-58)||(1038885-1038942)
chr2 (1-53)||(35125617-35125669)
chr2 (1-71)||(30851306-30851377)
chr2 (4-55)||(33615755-33615806)
chr2 (1-55)||(4603463-4603517)
chr2 (1-55)||(5247931-5247985)
chr2 (1-55)||(29683931-29683984)
chr2 (1-55)||(33953451-33953505)
chr2 (1-54)||(5482949-5483002)
chr2 (1-54)||(36387279-36387332)
chr2 (1-55)||(43671490-43671548)
chr2 (186-230)||(11883939-11883983)
chr2 (1-41)||(33953511-33953551)
[»] chr7 (52 HSPs)
chr7 (1-55)||(42430665-42430719)
chr7 (1-82)||(44448986-44449068)
chr7 (1-54)||(47332353-47332406)
chr7 (1-52)||(35127458-35127509)
chr7 (4-55)||(48840287-48840338)
chr7 (1-55)||(3173239-3173293)
chr7 (1-55)||(18942312-18942366)
chr7 (1-71)||(22564012-22564082)
chr7 (1-55)||(37042993-37043047)
chr7 (4-55)||(39304987-39305038)
chr7 (1-79)||(42758933-42759012)
chr7 (1-55)||(18942603-18942657)
chr7 (1-55)||(44941014-44941068)
chr7 (1-71)||(45324936-45325006)
chr7 (1-51)||(45909979-45910029)
chr7 (1-55)||(47193544-47193598)
chr7 (1-54)||(9907840-9907893)
chr7 (1-65)||(45443422-45443486)
chr7 (3-54)||(29036203-29036254)
chr7 (4-55)||(30648220-30648271)
chr7 (1-55)||(6723502-6723556)
chr7 (1-55)||(8919768-8919822)
chr7 (1-55)||(10470524-10470578)
chr7 (1-71)||(18808149-18808219)
chr7 (1-55)||(18942543-18942597)
chr7 (1-55)||(22563721-22563775)
chr7 (1-55)||(30648482-30648536)
chr7 (1-55)||(41718362-41718416)
chr7 (1-55)||(46855304-46855358)
chr7 (1-54)||(10096964-10097017)
chr7 (1-54)||(22642148-22642201)
chr7 (1-58)||(45443188-45443245)
chr7 (7-55)||(37393335-37393383)
chr7 (1-60)||(29036136-29036195)
chr7 (1-51)||(36986938-36986989)
chr7 (1-55)||(3173299-3173353)
chr7 (1-55)||(29036432-29036486)
chr7 (1-71)||(35127744-35127814)
chr7 (1-55)||(37043294-37043348)
chr7 (1-55)||(37043353-37043407)
chr7 (1-55)||(42759018-42759072)
chr7 (1-71)||(42759249-42759319)
chr7 (1-55)||(44941245-44941299)
chr7 (1-59)||(45203640-45203698)
chr7 (1-55)||(45324876-45324930)
chr7 (5-54)||(37393699-37393748)
chr7 (1-54)||(44941075-44941128)
chr7 (1-42)||(48840097-48840138)
chr7 (8-56)||(10097080-10097128)
chr7 (186-230)||(18925059-18925103)
chr7 (19-55)||(36987088-36987124)
chr7 (6-57)||(41718026-41718078)
[»] chr6 (18 HSPs)
chr6 (1-71)||(5985776-5985846)
chr6 (1-55)||(4799593-4799647)
chr6 (5-55)||(9049797-9049847)
chr6 (1-55)||(14942267-14942321)
chr6 (1-55)||(24012544-24012598)
chr6 (4-55)||(29134926-29134977)
chr6 (1-55)||(4799333-4799387)
chr6 (1-55)||(5986063-5986117)
chr6 (1-71)||(7675564-7675634)
chr6 (1-55)||(33041033-33041087)
chr6 (4-55)||(4997661-4997712)
chr6 (15-54)||(7858610-7858649)
chr6 (1-55)||(5985852-5985906)
chr6 (1-55)||(7858640-7858694)
chr6 (1-51)||(9049704-9049754)
chr6 (1-55)||(29134986-29135040)
chr6 (6-52)||(33033177-33033223)
chr6 (186-230)||(3403714-3403758)
[»] chr1 (37 HSPs)
chr1 (1-55)||(4965093-4965147)
chr1 (1-55)||(20492046-20492100)
chr1 (1-71)||(39834299-39834369)
chr1 (2-63)||(49113209-49113270)
chr1 (1-55)||(1102909-1102963)
chr1 (1-55)||(1695724-1695778)
chr1 (1-71)||(39833991-39834061)
chr1 (1-54)||(32712182-32712235)
chr1 (1-54)||(41810974-41811026)
chr1 (2-58)||(1102614-1102670)
chr1 (4-71)||(4764825-4764893)
chr1 (1-65)||(41810734-41810798)
chr1 (1-71)||(5739375-5739445)
chr1 (1-55)||(20491719-20491773)
chr1 (1-55)||(45721146-45721200)
chr1 (6-55)||(4765138-4765187)
chr1 (1-66)||(4974830-4974895)
chr1 (1-54)||(5739524-5739577)
chr1 (1-53)||(29386393-29386445)
chr1 (4-55)||(18088319-18088370)
chr1 (4-55)||(29987514-29987565)
chr1 (1-55)||(5277309-5277363)
chr1 (1-55)||(18088086-18088140)
chr1 (1-55)||(29987220-29987274)
chr1 (1-55)||(38823770-38823824)
chr1 (1-55)||(42371753-42371807)
chr1 (1-54)||(15615439-15615492)
chr1 (1-54)||(20491986-20492039)
chr1 (4-71)||(3339188-3339254)
chr1 (5-55)||(41524627-41524675)
chr1 (1-55)||(1695784-1695838)
chr1 (1-55)||(4974901-4974955)
chr1 (1-55)||(48074384-48074438)
chr1 (1-58)||(1102674-1102731)
chr1 (1-42)||(39834239-39834280)
chr1 (10-55)||(48074452-48074497)
chr1 (1-54)||(49588079-49588132)
[»] scaffold0121 (3 HSPs)
scaffold0121 (1-55)||(23670-23724)
scaffold0121 (1-54)||(23961-24014)
scaffold0121 (1-55)||(23901-23955)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-55)||(11732-11786)
[»] scaffold0051 (2 HSPs)
scaffold0051 (1-71)||(60474-60544)
scaffold0051 (5-81)||(60760-60837)
[»] scaffold0182 (2 HSPs)
scaffold0182 (1-69)||(22199-22267)
scaffold0182 (1-55)||(23435-23489)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-55)||(202296-202350)
scaffold0016 (1-55)||(202527-202581)
[»] scaffold0179 (2 HSPs)
scaffold0179 (1-49)||(32455-32502)
scaffold0179 (1-55)||(32254-32308)
[»] scaffold0220 (2 HSPs)
scaffold0220 (1-55)||(21831-21885)
scaffold0220 (1-55)||(22082-22136)
[»] scaffold0001 (1 HSPs)
scaffold0001 (186-230)||(438927-438971)


Alignment Details
Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 13657965 - 13657734
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt-ggcctaatttgttttaggaactttggtt 99  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || | ||||| |||| |||||||||| |||||||||||||||||    
T  13657965 atctgaaaccttagaaacttaaatgatctatctgaaacaaacatgaaacttaaagtacccggggaggtatttggcctaattttttttaggaactttggtt 13657866  T
Q  100 gttgggttgagggtgtatatgtaaacaacattttaatgatccatatctttatcagctagcattccctgcgttaatggtatattttatttggcttatttgc 199  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13657865 gttgggttgagggtgtgtttgtaaacaacattttaatgatccatatctttatcagctagcattccctgcgttaatggtatattttatttggcttaattgc 13657766  T
Q  200 acttttctcccatatcttttgctaactgtgcc 231  Q
    ||||||||| ||||||||||||||| ||||||    
T  13657765 acttttctctcatatcttttgctaattgtgcc 13657734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17579815 - 17579761
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  17579815 atctgaaaccttagaaacttaaagaacctatctgaaacaaacatgaaacttaaag 17579761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48517982 - 48517931
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaactta 52  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  48517982 atctaaaaccttagaaacttaaaggatctatctaaaacaaacatgaaactta 48517931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10820291 - 10820237
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  10820291 atctgaaaccttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaag 10820237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13712339 - 13712409
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| | |||||| |||||||| |||||||||||| || || |||||||||    
T  13712339 atctgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccatggagatatt 13712409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26997503 - 26997557
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  26997503 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatggaacttaaag 26997557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7515677 - 7515730
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  7515677 atctgaaaccttagaaacttaaagaatctatttaaaacaaacgtgaaatttaaa 7515730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25147192 - 25147139
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  25147192 atctgaaaccttagaaacttaaatgatctatctgaaacaaacatgaaacttaaa 25147139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47220520 - 47220573
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  47220520 atctaaaaccttagaaacttaaaggatctatcttaaacaaacatgaaacttaaa 47220573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 11218399 - 11218451
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaaga 56  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  11218399 tgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaaga 11218451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43122897 - 43122956
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    |||||||||||||||||||||||  |||||||| ||| ||||||||||||||||| ||||    
T  43122897 atctgaaaccttagaaacttaaacgatctatctgaaaaaaacatgaaacttaaaggactc 43122956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 47220294 - 47220227
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||| |||||||||||||||| |||||| |||||||| ||||||||||||||| ||| ||| ||||    
T  47220294 tgaaactttagaaacttaaagaacctatcttaaacaaacgtgaaacttaaagaacccagagaggtatt 47220227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 3750665 - 3750603
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggag 66  Q
    ||||||||||||||||||||| | |||||| |||||||| |||||||||||| || |||||||    
T  3750665 tgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggag 3750603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17580100 - 17580154
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| |||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  17580100 atctaaaaccttagaaacttaaaaaatctatctaaaacaaacataaaatttaaag 17580154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33623390 - 33623444
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||||||||| || ||||||||||||    
T  33623390 atctgaaaccttagaaacttaaaggacctatctaaaacagacgtgaaacttaaag 33623444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8112597 - 8112544
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||| |||||||| |||||||||  |||||||||||||||||||||||||||||    
T  8112597 atctaaaaccttaaaaacttaaatgatctatctaaaacaaacatgaaacttaaa 8112544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 52212028 - 52212081
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||||  | ||||||||||||||||||    
T  52212028 atctgaaaccttagaaacttaaaggatctatcccagacaaacatgaaacttaaa 52212081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8112844 - 8112896
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaa 53  Q
    ||||||||||||||||| |||||| | ||||||||||||||| ||||||||||    
T  8112844 atctgaaaccttagaaatttaaaggacctatctaaaacaaacgtgaaacttaa 8112896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 26997446 - 26997497
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| | ||||| ||||||||||| ||||||||||    
T  26997446 tgaaaccttagaaacttaaaggacctatccaaaacaaacatcaaacttaaag 26997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 29777311 - 29777260
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||| |||||    
T  29777311 tgaaaccttagaaacttaaaggatctatctgaaacaaacataaaacgtaaag 29777260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33623153 - 33623098
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatct-aaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| || ||||| |||| |||||||||||||||||    
T  33623153 atctgaaaccttagaaacttaaaggatttatctgaaaaaaaacatgaaacttaaag 33623098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50293867 - 50293918
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaactta 52  Q
    ||||||||||||| |||||||||| |||||||| |||||||||| |||||||    
T  50293867 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacataaaactta 50293918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1771997 - 1772051
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||| | |||||||| ||||||||||||    
T  1771997 atctgaaaccttagaaacttaaaggacctatatgaaacaaacgtgaaacttaaag 1772051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7515469 - 7515415
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| |||||||||||||| | |||||| |||||||| ||||||||||||    
T  7515469 atctgaaactttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaag 7515415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10820468 - 10820522
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | ||||| ||||||||| | ||||||||||    
T  10820468 atctgaaaccttagaaacttaaaggacctatccaaaacaaacttcaaacttaaag 10820522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11218305 - 11218359
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |  ||||| |||||||| ||||||||||||    
T  11218305 atctgaaaccttagaaacttaaaggacttatctgaaacaaacttgaaacttaaag 11218359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 11871465 - 11871395
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||| ||||||||||| | |||||| ||||| || |||||||||||| || ||||||| ||||    
T  11871465 atctgaaaccttggaaacttaaaggacctatctgaaacagacgtgaaacttaaaggacccagggaggtatt 11871395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17580040 - 17580098
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaact 59  Q
    ||||||||||||||||||||||||||||||||  ||| ||||  |||||||||| ||||    
T  17580040 atctgaaaccttagaaacttaaagaatctatccgaaataaactcgaaacttaaaaaact 17580098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43122661 - 43122607
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| ||||||||||  ||||||| |||||||| ||||||||||||    
T  43122661 atctgaaaccttaaaaacttaaagggtctatctgaaacaaacgtgaaacttaaag 43122607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11218132 - 11218079
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||| ||||||||||||||||||| | |||||| |||||||||| |||||||||    
T  11218132 atctaaaaccttagaaacttaaaggacctatctgaaacaaacataaaacttaaa 11218079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 26997267 - 26997186
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaattt 81  Q
    |||| ||||| ||||||||||||| | |||| | ||||||||||||||||||||| ||  |||||| || ||||||||||||    
T  26997267 atcttaaaccctagaaacttaaaggacctatttgaaacaaacatgaaacttaaaggacctagggaggtatttggcctaattt 26997186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48382272 - 48382325
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||| ||||||||||||||||||  |||||||| ||||||| ||||||||||||    
T  48382272 atctaaaaccttagaaacttaaatgatctatctgaaacaaatatgaaacttaaa 48382325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48518289 - 48518342
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||||||| ||||||||||||  ||||| |||||||| |||||||||||    
T  48518289 atctgaaaccttaaaaacttaaagaacttatctgaaacaaacgtgaaacttaaa 48518342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 37148246 - 37148194
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaa 53  Q
    |||||||||||||||||||||||| | ||||||   |||||||||||||||||    
T  37148246 atctgaaaccttagaaacttaaaggacctatctgttacaaacatgaaacttaa 37148194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 54924117 - 54924170
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaaga 56  Q
    |||||||||||||||||||||||  |  |||||||||||||||| |||||||||||    
T  54924117 atctgaaaccttagaaacttaaa--aggtatctaaaacaaacataaaacttaaaga 54924170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11871671 - 11871714
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacat 44  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||    
T  11871671 atctgaaaccttataaacttaaaggatctatctgaaacaaacat 11871714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 13712099 - 13712048
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||| |||||||||||||| || ||||| |||||||||| ||||||||||    
T  13712099 tgaaactttagaaacttaaaggatttatctgaaacaaacataaaacttaaag 13712048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 29231083 - 29231134
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaactta 52  Q
    ||||||||| |||||||||||||||| |||||| |||||||| | |||||||    
T  29231083 atctgaaactttagaaacttaaagaacctatctgaaacaaacttcaaactta 29231134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13658203 - 13658273
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| |  ||| | |||||||||| ||| |||||| || ||||||| ||||    
T  13658203 atctgaaaccttagaaacttaaaggacttatatgaaacaaacattaaatttaaaggacccagggaggtatt 13658273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24098273 - 24098327
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| |||| |||||||||||||| | |||||| |||||||| ||||||||||||    
T  24098273 atctaaaactttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaag 24098327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10820351 - 10820294
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||||||||||||||||||||||  | |||||  ||||||||  ||||||||||||||    
T  10820351 atctgaaaccttagaaacttaaaagacctatccgaaacaaactcgaaacttaaagaac 10820294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13712279 - 13712336
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    ||||||||||||| |||||||||| | |||||  ||||||||  ||||||||||||||    
T  13712279 atctgaaaccttaaaaacttaaaggacctatccgaaacaaactcgaaacttaaagaac 13712336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29231141 - 29231192
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||| ||||||||||||| |||||||||  |||||||||||||||||||    
T  29231141 atctgaaacattagaaacttaaa-aatctatct-gaacaaacatgaaacttaaa 29231192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 52211968 - 52212021
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| | |||||  ||||||||  ||||||||||    
T  52211968 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaa 52212021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54924057 - 54924114
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    ||||||||||||| ||| |||||||||||||   ||||||||  ||||||||||||||    
T  54924057 atctgaaaccttataaatttaaagaatctattcgaaacaaactcgaaacttaaagaac 54924114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 10820513 - 10820553
Alignment:
Q  15 aaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||| | |||||| |||||||||||||||||||||    
T  10820513 aaacttaaaggacctatctgaaacaaacatgaaacttaaag 10820553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 49178463 - 49178575
Alignment:
Q  119 tgtaaacaacattttaatgatccatatctttatcagctagcattccctgcgttaatggtatattttatttggcttatttgcacttttctcccatatcttt 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49178463 tgtaaacaacattttaatgatccatatctttatcagctagcattccctgcgttaatggtatattttatttggcttaattgcacttttctcccatatcttt 49178562  T
Q  219 tgctaactgtgcc 231  Q
    |||||| ||||||    
T  49178563 tgctaattgtgcc 49178575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21956093 - 21956023
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |  ||||||||||||    
T  21956093 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaaggatccagggagatatt 21956023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7632892 - 7632830
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagg 63  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||    
T  7632892 atctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaagaacccagg 7632830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14336932 - 14336986
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  14336932 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 14336986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32751178 - 32751124
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  32751178 atctgaaaccttagaaacttaaagaatctatcttaaacaaacatgaaatttaaag 32751124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34979550 - 34979470
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaatt 80  Q
    |||||||||||||||||||||||| | |||||| |||||||| |||||||||||| || ||||||| || |||||||||||    
T  34979550 atctgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcctaatt 34979470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13846666 - 13846612
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  13846666 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaccttaaag 13846612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21956401 - 21956471
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||| |||||||||| | |||||  ||||||||||||||||||||| |||||||||| ||||    
T  21956401 atctgaaaccttaaaaacttaaaggacctatccgaaacaaacatgaaacttaaaggactcagggaggtatt 21956471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35779017 - 35779071
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  35779017 atctgaaaccttaaaaacttaaaggatctatcgaaaacaaacatgaaacttaaag 35779071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18598261 - 18598196
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggag 66  Q
    |||||||||||||||||||||||| | |||||| |||||||| ||||||| |||| ||||||||||    
T  18598261 atctgaaaccttagaaacttaaaggacctatctgaaacaaacttgaaactcaaaggactcagggag 18598196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 25154832 - 25154885
Alignment:
Q  2 tctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  25154832 tctgaaaccttagaaacttaaaagatctatctgaaacaaacatgaaacttaaag 25154885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 40289734 - 40289787
Alignment:
Q  5 gaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  40289734 gaaatcttagaaacttaaaggatctatctgaaacaaacatgaaacttaaagaac 40289787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 55358569 - 55358622
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||    
T  55358569 atctgaaaccttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaa 55358622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 26553988 - 26554040
Alignment:
Q  3 ctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  26553988 ctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaag 26554040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15631678 - 15631732
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| |||||| | |||||||||||||||||||||    
T  15631678 atctgaaaccttaaaaacttaaaggatctatgtgaaacaaacatgaaacttaaag 15631732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18598569 - 18598623
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| || | ||||||||||||||| ||||||||||||    
T  18598569 atctgaaaccttagaaacttagaggacctatctaaaacaaacttgaaacttaaag 18598623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40998462 - 40998516
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||    
T  40998462 atctgaaaccttataaacttaaagaacatatctaaaacaaacgtgaaacttaaag 40998516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41898365 - 41898419
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  |||||||| |||||||| ||||||||||||    
T  41898365 atctgaaaccttagaaacttaaatgatctatctgaaacaaacttgaaacttaaag 41898419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41898425 - 41898479
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||| ||||||    
T  41898425 atctgaaaccttagaaactgaaagaatctatatgaaacaaacatgaaatttaaag 41898479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46430014 - 46430068
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||| ||||||    
T  46430014 atctgaaaccttataaacttaaaggatctatctaaaacaaatatgaaatttaaag 46430068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 53856776 - 53856838
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagg 63  Q
    ||||||||| |||||||||||||| |||||||| |||||||| |||||||||||  |||||||    
T  53856776 atctgaaactttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaatgactcagg 53856838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25363592 - 25363648
Alignment:
Q  1 atctgaaaccttagaaacttaaagaa--tctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |  ||||||| |||||||||||||||||||||    
T  25363592 atctgaaaccttagaaacttaaaggagatctatctgaaacaaacatgaaacttaaag 25363648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 50523190 - 50523134
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaa 57  Q
    |||||||||||||||||||||||| |||||||  ||||||||  |||||||||||||    
T  50523190 atctgaaaccttagaaacttaaaggatctatccgaaacaaactcgaaacttaaagaa 50523134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 13864160 - 13864199
Alignment:
Q  15 aaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  13864160 aaacttaaagaatctatctaaaacaaacgtgaaacttaaa 13864199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5322571 - 5322517
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||| ||||||||||| |||||| |||||| | |||||||||||||||||||||    
T  5322571 atctgcaaccttagaaatttaaaggatctattttaaacaaacatgaaacttaaag 5322517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20421191 - 20421137
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||| ||||||||  |||||||||||    
T  20421191 atctgaaaccttagaaacttaaaggacctatctgaaacaaactcgaaacttaaag 20421137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29031335 - 29031265
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||| ||||||||||||||  |  |||||||||||||| |||||||||||| || || |||||||||    
T  29031335 atctgaaatcttagaaacttaaaagacttatctaaaacaaacgtgaaacttaaaggacccatggagatatt 29031265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29043454 - 29043384
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||| ||||||||||||||  |  |||||||||||||| |||||||||||| || || |||||||||    
T  29043454 atctgaaatcttagaaacttaaaagacttatctaaaacaaacgtgaaacttaaaggacccatggagatatt 29043384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32751323 - 32751377
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||| |||||||| | ||||||||||    
T  32751323 atctgaaaccttagaaacttaaaggacctatctgaaacaaactttaaacttaaag 32751377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40998178 - 40998124
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| |||| ||||||||  ||||||||||||||||||||||| ||||||    
T  40998178 atctgaaactttagtaacttaaaagatctatctaaaacaaacatgaaatttaaag 40998124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41898189 - 41898135
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | | |||| |||||||| ||||||||||||    
T  41898189 atctgaaaccttagaaacttaaaggacccatctgaaacaaacgtgaaacttaaag 41898135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53856539 - 53856485
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  || ||||  |||||||||||||||||||||    
T  53856539 atctgaaaccttagaaacttaaaagatttatccgaaacaaacatgaaacttaaag 53856485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3253492 - 3253545
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||| ||||||| |||||| ||||| || ||||||||||||||||||||    
T  3253492 atctgaaacattagaaatttaaaggatctaactgaaacaaacatgaaacttaaa 3253545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 40289408 - 40289351
Alignment:
Q  14 gaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||| | |||||| ||||||||||||||||||||| || ||||||| ||||    
T  40289408 gaaacttaaagtacctatctgaaacaaacatgaaacttaaaggacccagggaggtatt 40289351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41898248 - 41898195
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||||  ||||||||  ||||||||||    
T  41898248 atctgaaaccttagaaacttaaaggatctatccgaaacaaactcgaaacttaaa 41898195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14966461 - 14966520
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||| ||| |||||| ||||    
T  14966461 atctaaaaccttagaaccttaaacgatctatctaaaacaaacataaaatttaaaggactc 14966520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 41511315 - 41511374
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    ||||||||| |||||||||||||  |||||||| ||| |||||| |||||||||| ||||    
T  41511315 atctgaaactttagaaacttaaatgatctatctgaaataaacataaaacttaaaggactc 41511374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13870437 - 13870368
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||| |||||||| ||| |||||| | ||||||||||||||||| ||| |||||  |||||||||||||||    
T  13870437 atcttaaaccttaaaaatttaaaggaactatctaaaacaaacat-aaaattaaaagactcagggagatatt 13870368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14336755 - 14336701
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||  |||||||||||    
T  14336755 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaag 14336701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14336872 - 14336926
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  |||||||| | ||||||||||    
T  14336872 atctgaaaccttagaaacttaaaggacctatccgaaacaaacttcaaacttaaag 14336926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15631393 - 15631339
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||| |||||| | |||||| ||| ||||| |||||||||||    
T  15631393 atctgaaaccttagaaatttaaaggacctatctgaaataaacaggaaacttaaag 15631339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26553926 - 26553980
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||  |||||||||||    
T  26553926 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaag 26553980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32751383 - 32751437
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||  | |||||| |||||||||| ||||||||||    
T  32751383 atctaaaaccttagaaacttaaaagacctatctgaaacaaacataaaacttaaag 32751437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 50523126 - 50523076
Alignment:
Q  5 gaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||| ||||||||||||  | ||||||||||||||| ||||||||||||    
T  50523126 gaaaccatagaaacttaaatgacctatctaaaacaaacgtgaaacttaaag 50523076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52851189 - 52851238
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| |||||||||||||||||||||     |||||||||||||||||||    
T  52851189 atctgaaactttagaaacttaaagaatctat-----acaaacatgaaacttaaag 52851238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 9860961 - 9861010
Alignment:
Q  6 aaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||  |||||||| ||||||||| |||| ||||||    
T  9860961 aaaccttagaaacttaaaagatctatctgaaacaaacaagaaatttaaag 9861010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6121577 - 6121523
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6121577 atctgaaaccttagaaacttaaaggatctatctaaaacaaacatgaaacttaaag 6121523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29276690 - 29276610
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaatt 80  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||||||||||||  ||||||| || |||||||||||    
T  29276690 atctgaaaccttagaaacttaaaggacctatctgaaacaaacatgaaacttaaagaatccagggaggtatttggcctaatt 29276610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28463875 - 28463805
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||||||||| |||| ||||| ||||    
T  28463875 atctgaaaccttagaaacttaaaggatttatctgaaacaaacatgaaacttaaaggactcggggaggtatt 28463805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31827187 - 31827241
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  31827187 atctgaaaccttagaaacttaaaaaatctatctgaaacaaacatgaaacttaaag 31827241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9117572 - 9117519
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  9117572 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaa 9117519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22780130 - 22780077
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  22780130 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaa 22780077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 44728178 - 44728125
Alignment:
Q  2 tctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  44728178 tctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 44728125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27702633 - 27702692
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  27702633 atctgaaaccttagaaacttaaaggagctatctgaaacaaacatgaaacttaaaggactc 27702692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4157647 - 4157593
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  4157647 atctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaag 4157593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9779172 - 9779226
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  9779172 atctgaaaccttaaaaacttaaaggacctatctaaaacaaacatgaaacttaaag 9779226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23404115 - 23404185
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||| ||||||||| |||||||| | ||||||||||||||||||| || | ||||||||||    
T  23404115 atctgaaaccttagtaacttaaaggatctatctgagacaaacatgaaacttaaaggacccggggagatatt 23404185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24469503 - 24469557
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  24469503 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaatttaaag 24469557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29218414 - 29218360
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  29218414 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaag 29218360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35435617 - 35435671
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  35435617 atctaaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 35435671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 2251086 - 2251171
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaatttgttt 85  Q
    ||||||||| |||||||||||||| | |||||| |||||||| | |||||||||| |||||||||| || |||||||| |||||||    
T  2251086 atctgaaactttagaaacttaaaggacctatctgaaacaaacgtaaaacttaaaggactcagggaggtatttggcctattttgttt 2251171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 22444986 - 22445038
Alignment:
Q  6 aaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  22444986 aaaccttagaaacttaaaggatttatctgaaacaaacatgaaacttaaagaac 22445038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2250778 - 2250719
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    ||||||||||||| |||||||||| | || | ||||||||||||||||||||||||||||    
T  2250778 atctgaaaccttaaaaacttaaaggacctgtataaaacaaacatgaaacttaaagaactc 2250719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1043708 - 1043638
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||| |||||||||| |||||| |||||| | ||||||||||||||||||||| || | ||||||||||    
T  1043708 atctgagaccttagaaatttaaaggatctatttgaaacaaacatgaaacttaaaggacccggggagatatt 1043638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15315406 - 15315460
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||    
T  15315406 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgatacttaaag 15315460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15495775 - 15495829
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||    
T  15495775 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgatacttaaag 15495829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 24043801 - 24043747
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| |||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  24043801 atctaaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaag 24043747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31826903 - 31826849
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||||||| |||| ||||||||||||    
T  31826903 atctgaaaccttagaaacttaaaggacctatctaaaataaacgtgaaacttaaag 31826849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44318515 - 44318585
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||| |||||||||||||| |||||| | || ||||||||||||||||||||| | ||||| ||||    
T  44318515 atctgaaacattagaaacttaaaggatctatttgaagcaaacatgaaacttaaagaacgcggggaggtatt 44318585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11482712 - 11482765
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||| |||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  11482712 atctaaaaccttaaaaacttaaataatctatctaaaacaaacatgaaatttaaa 11482765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 15891640 - 15891587
Alignment:
Q  2 tctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||    
T  15891640 tctgaaaccttagaaactttaaggatctatctgaaacaaatatgaaacttaaag 15891587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29276750 - 29276693
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||||||||||||||||||||||| | ||||| |||||||||  ||||||||||||||    
T  29276750 atctgaaaccttagaaacttaaaggacctatccaaaacaaactcgaaacttaaagaac 29276693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 11482658 - 11482710
Alignment:
Q  7 aaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaact 59  Q
    ||||||| |||||||||||| |||||| |||||||| ||||||||||||||||    
T  11482658 aaccttaaaaacttaaagaacctatctgaaacaaacttgaaacttaaagaact 11482710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29457188 - 29457124
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcaggga 65  Q
    |||||||| ||||||||||||||  | |||||| ||||||||||||||||||||| |||| ||||    
T  29457188 atctgaaatcttagaaacttaaaagacctatctgaaacaaacatgaaacttaaaggactcgggga 29457124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 31618739 - 31618787
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaactta 52  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  31618739 tgaaaccttagaaacttaaaggatctatctgaaacaaacttgaaactta 31618787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 7004 - 6953
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||  || ||||| |||||||||||||||||||||    
T  7004 tgaaaccttagaaacttaaaagatatatctgaaacaaacatgaaacttaaag 6953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9117632 - 9117578
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | ||||| |||||||||  |||||||||||    
T  9117632 atctgaaaccttagaaacttaaaggacctatccaaaacaaactcgaaacttaaag 9117578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15315169 - 15315100
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||||||  |||||| | |||||| |||||||| |||||||||||| || ||||||||||||    
T  15315169 atctgaaaccttagaat-ttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggagatatt 15315100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15315229 - 15315175
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||| |||||||||||    
T  15315229 atctgaaaccttagaaacttaaaggacctatccgaaacaaacacgaaacttaaag 15315175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15495538 - 15495469
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||||||  |||||| | |||||| |||||||| |||||||||||| || ||||||||||||    
T  15495538 atctgaaaccttagaat-ttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggagatatt 15495469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15495598 - 15495544
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||| |||||||||||    
T  15495598 atctgaaaccttagaaacttaaaggacctatccgaaacaaacacgaaacttaaag 15495544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22444674 - 22444604
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||| |||||||||||||| | |||||  |||||||| |||||||||||| || ||||||| ||||    
T  22444674 atctgaaactttagaaacttaaaggacctatccgaaacaaacgtgaaacttaaaggacccagggaggtatt 22444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38507132 - 38507078
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||| ||||||||||||||| |||||||| | |||||||||||||||||||    
T  38507132 atctaaaatcttagaaacttaaaggatctatctgagacaaacatgaaacttaaag 38507078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42691966 - 42691913
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||| ||||||||||||||||||| |||||| ||||||| || |||||||||||    
T  42691966 atctaaaaccttagaaacttaaaggatctatttaaaacagacgtgaaacttaaa 42691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 2257124 - 2257065
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    ||||||||| |||||||||||||| | |||||| |||||||| | |||||||||| ||||    
T  2257124 atctgaaactttagaaacttaaaggacctatctgaaacaaacgtaaaacttaaaggactc 2257065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2257432 - 2257491
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    ||||||||||||| || ||||||| | || | ||||||||||||||||||||||| ||||    
T  2257432 atctgaaaccttaaaagcttaaaggacctgtataaaacaaacatgaaacttaaaggactc 2257491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 11482439 - 11482396
Alignment:
Q  28 ctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||||| |||||||||||| |||||||||| ||||    
T  11482439 ctatctaaaacaaacgtgaaacttaaaggactcagggaggtatt 11482396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15300652 - 15300581
Alignment:
Q  1 atctgaaaccttagaaacttaaa-gaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||| |||| ||||||||||||| | | |||||| |||||||||||||||||||||||| ||| ||| ||||    
T  15300652 atctaaaactttagaaacttaaaaggacctatctgaaacaaacatgaaacttaaagaacccagcgaggtatt 15300581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15481021 - 15480950
Alignment:
Q  1 atctgaaaccttagaaacttaaa-gaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||| |||| ||||||||||||| | | |||||| |||||||||||||||||||||||| ||| ||| ||||    
T  15481021 atctaaaactttagaaacttaaaaggacctatctgaaacaaacatgaaacttaaagaacccagcgaggtatt 15480950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 16929298 - 16929255
Alignment:
Q  187 ttggcttatttgcacttttctcccatatcttttgctaactgtgc 230  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||    
T  16929298 ttggcttaattgcacttttctcccctatcttttgctaattgtgc 16929255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 26062413 - 26062374
Alignment:
Q  16 aacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  26062413 aacttaaagaatctatctaaaacaaacttaaaacttaaag 26062374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 31618424 - 31618373
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||| |||||| | |||||| |||||||| ||||||||||||    
T  31618424 tgaaaccttagaaatttaaaggacctatctgaaacaaacgtgaaacttaaag 31618373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42620814 - 42620869
Alignment:
Q  1 atctgaaaccttagaaacttaaa-gaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| ||| ||||||||| | |||||||| |||||||||||||||||||||    
T  42620814 atctgaaactttaaaaacttaaaaggatctatctgaaacaaacatgaaacttaaag 42620869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7184 - 7238
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |  |||| |||||||||  |||||||||||    
T  7184 atctgaaaccttagaaacttaaaggacatatccaaaacaaactcgaaacttaaag 7238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1043944 - 1044014
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||  |  |||| ||||||||| | |||||||||| || |||| |||||||    
T  1043944 atctgaaaccttagaaacttaaatgacttatcgaaaacaaacgttaaacttaaaggacccaggaagatatt 1044014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1691957 - 1691903
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| || |||| |||| ||||  |||||||||||    
T  1691957 atctgaaaccttagaaacttaaaggatttatccaaaataaactcgaaacttaaag 1691903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6121885 - 6121939
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||| |  ||||| |||||||| ||||||||||||    
T  6121885 atctaaaaccttagaaacttaaaggacatatctgaaacaaacgtgaaacttaaag 6121939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9117749 - 9117803
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||  |||||||||||    
T  9117749 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaag 9117803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9117809 - 9117863
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||| ||||||||||||||| | |||||| |||||||  ||||||||||||    
T  9117809 atctgaaagcttagaaacttaaaggacctatctgaaacaaatgtgaaacttaaag 9117863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15891701 - 15891647
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||| | |||||| |||||||| | ||||||||||    
T  15891701 atctaaaaccttagaaacttaaaggacctatctgaaacaaacttcaaacttaaag 15891647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15891818 - 15891872
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||| | |||||| |||||||| | ||||||||||    
T  15891818 atctaaaaccttagaaacttaaaggacctatctgaaacaaacttcaaacttaaag 15891872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 15891878 - 15891940
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagg 63  Q
    |||||||||||||||||||||||| |  ||||| |||||||  | ||||||||||||| ||||    
T  15891878 atctgaaaccttagaaacttaaaggacgtatctgaaacaaatgttaaacttaaagaacccagg 15891940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23275396 - 23275450
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||  |||||||||||    
T  23275396 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaag 23275450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23275456 - 23275510
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||| | |||||||| | ||||||||||    
T  23275456 atctgaaaccttagaaacttaaaggacctatatgaaacaaacgttaaacttaaag 23275510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23403879 - 23403825
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||  |||||||||||    
T  23403879 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaag 23403825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29276916 - 29276986
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| |  ||||| ||| |||| | |||||||||| || ||||||| ||||    
T  29276916 atctgaaaccttagaaacttaaaggacatatctgaaataaacgtaaaacttaaaggacccagggaggtatt 29276986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35435441 - 35435387
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  |||||||| |||||||   |||||||||||    
T  35435441 atctgaaaccttagaaacttaaaagatctatctgaaacaaattcgaaacttaaag 35435387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38507308 - 38507362
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  | |||| |||||||||| | ||||||||||    
T  38507308 atctgaaaccttagaaacttaaacgacctatttaaaacaaacgttaaacttaaag 38507362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4157820 - 4157877
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||||||||||||||||||||||| |  ||||  ||||||||  ||||||||||||||    
T  4157820 atctgaaaccttagaaacttaaaggacatatcccaaacaaactcgaaacttaaagaac 4157877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9778995 - 9778958
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaac 38  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  9778995 atctgaaactttagaaacttaaaggatctatctaaaac 9778958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22444921 - 22444978
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||||||||||||||||||||||| | |||||  ||||||||   |||||||||||||    
T  22444921 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcaaaacttaaagaac 22444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29457248 - 29457191
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||||||||||||||||||||||| |  ||||  ||||||||  ||||||||||||||    
T  29457248 atctgaaaccttagaaacttaaaggacatatccgaaacaaactcgaaacttaaagaac 29457191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 38169786 - 38169746
Alignment:
Q  14 gaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||||||| |||| |||||||||| |||||||||||    
T  38169786 gaaacttaaagaacctatataaaacaaacgtgaaacttaaa 38169746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42092260 - 42092314
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42092260 atctgaaaccttagaaacttaaaggatctatctaaaacaaacatgaaacttaaag 42092314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18008495 - 18008565
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| |||| ||||| ||||    
T  18008495 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaaggactcggggaggtatt 18008565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39805005 - 39804951
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  39805005 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 39804951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2796784 - 2796727
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  2796784 atctaaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaagaac 2796727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8943243 - 8943297
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||    
T  8943243 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaactaaaag 8943297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21250635 - 21250689
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  21250635 atctaaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 21250689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27319049 - 27319119
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||||||| |||||| |||||||| |||||||||| |||||||||| | |||||||| ||||    
T  27319049 atctgaaaccttagaaatttaaaggatctatctgaaacaaacataaaacttaaaggattcagggaggtatt 27319119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2802945 - 2802888
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||| ||||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  2802945 atctaaaaccttagaaacttaaaagatctatctgaaacaaacatgaaacttaaagaac 2802888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29440325 - 29440378
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  29440325 atctgaaaccttaaaaacttaaaggatctatctaaaacaaatatgaaacttaaa 29440378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6641865 - 6641813
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaa 53  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  6641865 atctgaaatcttagaaacttaaaggatctatctgaaacaaacatgaaacttaa 6641813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42092065 - 42091986
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaat 79  Q
    |||||||| ||||||||||||||| | |||||| |||||||| |||||||||||| || ||||||| || ||||||||||    
T  42092065 atctgaaatcttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatttggcctaat 42091986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5361529 - 5361583
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  |||||||| ||||||||||| |||||||||    
T  5361529 atctgaaaccttagaaacttaaatgatctatctgaaacaaacatgcaacttaaag 5361583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6642102 - 6642156
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | ||||||||||||||| || |||||||||    
T  6642102 atctgaaaccttagaaacttaaaggacctatctaaaacaaacgtggaacttaaag 6642156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21250327 - 21250257
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||| ||| | |||||| |||||||| |||||||||||| || ||||||| ||||    
T  21250327 atctgaaaccttagaaactttaaggacctatctgaaacaaacctgaaacttaaaggacacagggaggtatt 21250257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26006384 - 26006437
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  26006384 atctaaaaccttagaaacttaaa-aatctatctgaaacaaacatgaaacttaaag 26006437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28574708 - 28574762
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  |||||||| ||||||| |||||||||||||    
T  28574708 atctgaaaccttagaaacttaaaagatctatctgaaacaaatatgaaacttaaag 28574762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1737679 - 1737736
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    ||||||||||||| ||||| |||  |||||||||| ||||||||||||||||||||||    
T  1737679 atctgaaaccttaaaaactgaaatgatctatctaagacaaacatgaaacttaaagaac 1737736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 8942932 - 8942871
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcaggga 65  Q
    ||||||||||||||||||||| | |||| | ||||||||||||||||||||| || ||||||    
T  8942932 tgaaaccttagaaacttaaaggacctatatgaaacaaacatgaaacttaaaggacccaggga 8942871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10223521 - 10223468
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||| || |||| |||||| |||||||||||||||||||||||||||||    
T  10223521 atctgaaactttcgaaaattaaagcatctatctaaaacaaacatgaaacttaaa 10223468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20429674 - 20429621
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||| |||||||||||||||||| |||||| | ||||||||||||||||||||    
T  20429674 atctgcaaccttagaaacttaaaggatctattttaaacaaacatgaaacttaaa 20429621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42375489 - 42375432
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    ||||||||||||| ||| |||||| || ||||| ||||||||||||||||||||||||    
T  42375489 atctgaaaccttaaaaatttaaaggatatatcttaaacaaacatgaaacttaaagaac 42375432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 2796993 - 2797044
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| | |||||| |||||||| ||||||||||||    
T  2796993 tgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaag 2797044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 5360576 - 5360534
Alignment:
Q  12 tagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  5360576 tagaaacttaaagaatctatctaaaacaaac-tgaaacttaaag 5360534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 27495948 - 27495897
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| | |||||| |||||||| ||||||||||||    
T  27495948 tgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaag 27495897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42375797 - 42375851
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| |||||||| || ||||||||| ||||||||||||||| ||||||||||||    
T  42375797 atctaaaaccttaaaagcttaaagaacctatctaaaacaaacgtgaaacttaaag 42375851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29440177 - 29440120
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    ||||||||| ||  |||||||||| |  ||||||||||||||||||||||||||||||    
T  29440177 atctgaaactttgaaaacttaaaggacatatctaaaacaaacatgaaacttaaagaac 29440120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 2803154 - 2803205
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| |  ||||| |||||||| ||||||||||||    
T  2803154 tgaaaccttagaaacttaaaggacatatctgaaacaaacgtgaaacttaaag 2803205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 28571106 - 28571055
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||| ||||||||||||||| | |||||| |||||||| ||||||||||||    
T  28571106 tgaaagcttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaag 28571055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6642042 - 6642096
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||  |||||||||||    
T  6642042 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaag 6642096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17849752 - 17849806
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| |||||||||||||  |||||||| ||| ||| |||||||||||||    
T  17849752 atctgaaactttagaaacttaaacgatctatctgaaataaatatgaaacttaaag 17849806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35171819 - 35171765
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| ||| |||||| ||||||| |||||||| | |||||||||||    
T  35171819 atctgaaaccttaaaaatttaaaggatctatccaaaacaaatacgaaacttaaag 35171765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39805065 - 39805011
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  |||||||| | ||||||||||    
T  39805065 atctgaaaccttagaaacttaaaggacctatccgaaacaaacttcaaacttaaag 39805011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 1069116 - 1069067
Alignment:
Q  5 gaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||| |||||||| | |||||||| ||| |||||    
T  1069116 gaaaccttagaaacttaaaggatctatctgagacaaacataaaatttaaa 1069067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 18008246 - 18008193
Alignment:
Q  2 tctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||| ||||||| |||||| | |||||| |||||||| ||||||||||||    
T  18008246 tctgaaactttagaaatttaaaggacctatctgaaacaaacgtgaaacttaaag 18008193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 27496170 - 27496227
Alignment:
Q  14 gaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||| | |||||| |||||||| |||||||||||| || ||||||| ||||    
T  27496170 gaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatt 27496227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40807809 - 40807768
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaac 42  Q
    |||||||||||||||||||||||| || ||||| ||||||||    
T  40807809 atctgaaaccttagaaacttaaaggatttatctgaaacaaac 40807768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 30103166 - 30103122
Alignment:
Q  11 ttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||| |||| ||| |||||||||||||| ||||||    
T  30103166 ttagaaacttaaaggatctgtctgaaacaaacatgaaatttaaag 30103122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 3e-20; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34334600 - 34334530
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||    
T  34334600 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaaggactcaaggagatatt 34334530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33616046 - 33616099
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33616046 atctgaaaccttagaaacttaaaggatctatctaaaacaaacatgaaacttaaa 33616099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5482942 - 5482888
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  5482942 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 5482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45638130 - 45638060
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||| |||||||||||||| | |||||| ||||||||||||||||||||| || ||||||||||||    
T  45638130 atctgaaacgttagaaacttaaaggacctatctgaaacaaacatgaaacttaaaggacccagggagatatt 45638060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 30823675 - 30823755
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaatt 80  Q
    ||||||||||||||||| |||||  ||||||||||||||||| | |||||||||| |||||||||| || |||||||||||    
T  30823675 atctgaaaccttagaaaattaaatgatctatctaaaacaaacgtaaaacttaaaggactcagggaggtatttggcctaatt 30823755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 4603786 - 4603837
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  4603786 tgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 4603837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 30513021 - 30512962
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  30513021 atcttaaaccttagaaacttaaagaatctatctgaaacaaacaagaaacttaaaggactc 30512962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 45638370 - 45638421
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  45638370 tgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 45638421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1844538 - 1844592
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  1844538 atctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaag 1844592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11973990 - 11973937
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  11973990 atctgaaaccttagaaacttaaaggatttatctgaaacaaacatgaaacttaaa 11973937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5483179 - 5483249
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||| ||||||||||| | |||||| |||||||| |||||||||||| |||||| ||| ||||    
T  5483179 atctgaaaccttggaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggactcagagaggtatt 5483249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7438477 - 7438531
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  | ||||||||||||||| ||||||||||||    
T  7438477 atctgaaaccttagaaacttaaaagacctatctaaaacaaacgtgaaacttaaag 7438531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7881969 - 7882039
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||  |||||||| ||| ||||| ||||||||||| |||| ||||| ||||    
T  7881969 atctgaaaccttagaaacttaaatgatctatctgaaaaaaacacgaaacttaaaggactcggggaggtatt 7882039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15286112 - 15286166
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| |||||| | |||||||||||||||||||||    
T  15286112 atctgaaaccttataaacttaaaggatctatatgaaacaaacatgaaacttaaag 15286166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15787029 - 15787083
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||| | |||||||||||||| ||||||    
T  15787029 atctgaaaccttagaaacttaaaggatctatttgaaacaaacatgaaatttaaag 15787083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28238808 - 28238877
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||  ||||||||| |||||    
T  28238808 atctgaaatcttaaaaacttaaaga-tctatctgaaacaaacatgaaacttaaaagactcagggatatatt 28238877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29683647 - 29683593
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||||| ||||||    
T  29683647 atctgaaaccttagaaacttaaagaacctatctgaaacaaacgtgaaatttaaag 29683593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44436489 - 44436435
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||    
T  44436489 atctgaaaccttagaaacttaaaggatctatctgaaaaaaacatgaaatttaaag 44436435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 28182432 - 28182496
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcaggga 65  Q
    |||| ||||||||||||||||||| | |||||| |||||||| |||||||||||| || ||||||    
T  28182432 atctaaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaaggacccaggga 28182496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28238502 - 28238438
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcaggga 65  Q
    |||| ||||||||||||||||||| | |||||| |||||||| |||||||||| | |||||||||    
T  28238502 atctaaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaacggactcaggga 28238438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1039179 - 1039249
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||| ||||||||||||| |||| ||| ||||| |||||||| |||||||||||| || ||||||| ||||    
T  1039179 atctaaaaccttagaaacctaaaaaatttatctgaaacaaacgtgaaacttaaaggacccagggaggtatt 1039249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5248045 - 5247991
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||||||    
T  5248045 atctgaaaccttagaaacttaaaggatctatccgaaacaaacttcaaacttaaag 5247991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 26737844 - 26737794
Alignment:
Q  180 attttatttggcttatttgcacttttctcccatatcttttgctaactgtgc 230  Q
    ||||| ||||||||| ||||||||||| ||| |||||||||||||||||||    
T  26737844 attttttttggcttaattgcacttttcacccctatcttttgctaactgtgc 26737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30513197 - 30513267
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| |   |||| |||||||| |||||||||||| |||||| || |||||    
T  30513197 atctgaaaccttagaaacttaaaggactcatctgaaacaaacgtgaaacttaaaggactcagagaaatatt 30513267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30823401 - 30823347
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||| ||| ||||||||||| || |||||||||||||||    
T  30823401 atctgaaaccttaaaaactttaaggatctatctaaatcagacatgaaacttaaag 30823347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30851132 - 30851078
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| ||| |||||||||| |||||||| ||||||| |||||||||||||    
T  30851132 atctgaaacgttaaaaacttaaaggatctatctgaaacaaatatgaaacttaaag 30851078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35125412 - 35125342
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||| |||||||||||||| | | |||| |||||||||| |||||||||| || ||||||| ||||    
T  35125412 atctgaaactttagaaacttaaaggaccgatctgaaacaaacattaaacttaaaggacccagggaggtatt 35125342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40343734 - 40343788
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||||||||||||   ||||||||||    
T  40343734 atctgaaaccttagaaacttaaagcacctatctaaaacaaactcaaaacttaaag 40343788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43865423 - 43865369
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||  |||||||| |||||||||||||| ||||||    
T  43865423 atctgaaaccttaaaaacttaaaagatctatctgaaacaaacatgaaatttaaag 43865369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1038942 - 1038885
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    ||||||||| ||| |||||||||| |||||||| ||| |||| |||||||||||||||    
T  1038942 atctgaaactttaaaaacttaaaggatctatctgaaataaacgtgaaacttaaagaac 1038885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35125617 - 35125669
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaa 53  Q
    |||||||||||||||||||||||  |||||| | ||| |||||||||||||||    
T  35125617 atctgaaaccttagaaacttaaatgatctatgtgaaataaacatgaaacttaa 35125669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30851306 - 30851377
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctat-ctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||||||| |||||| |  ||| || |||||||| | |||||||||| |||||||||||||||    
T  30851306 atctgaaaccttagaaatttaaaggacatattctgaaacaaacgttaaacttaaaggactcagggagatatt 30851377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 33615806 - 33615755
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  ||||| ||| |||| ||||||||||||    
T  33615806 tgaaaccttagaaacttaaagaacttatctgaaataaacgtgaaacttaaag 33615755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4603517 - 4603463
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||| | |||||  |||||||| ||||||||||||    
T  4603517 atctaaaaccttagaaacttaaaggacctatccgaaacaaacgtgaaacttaaag 4603463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5247985 - 5247931
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||| ||||||||||  || ||||| |||||||||| ||||||||||    
T  5247985 atctgaaaccttcgaaacttaaatgatttatctgaaacaaacataaaacttaaag 5247931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29683931 - 29683984
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||| ||| ||||||||||| |||||||| |||||||||||||||| ||||    
T  29683931 atctgaaatctt-gaaacttaaagtatctatctgaaacaaacatgaaactgaaag 29683984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33953451 - 33953505
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||  |||||||||||    
T  33953451 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaag 33953505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5483002 - 5482949
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||||||| |||||||||| |||||||  ||||||||  ||||||||||    
T  5483002 atctgaaaccttataaacttaaaggatctatccgaaacaaactcgaaacttaaa 5482949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36387332 - 36387279
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||| |||  |||||||||| |||||||| | ||||||||||||||||||    
T  36387332 atctgaaatcttgaaaacttaaaggatctatctgacacaaacatgaaacttaaa 36387279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 43671490 - 43671548
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatc----tatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||| |||    ||||||||| |||||||||||||||||    
T  43671490 atctaaaaccttagaaacttaaaggatctatatatctaaaataaacatgaaacttaaag 43671548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 11883983 - 11883939
Alignment:
Q  186 tttggcttatttgcacttttctcccatatcttttgctaactgtgc 230  Q
    ||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  11883983 tttggcttaattgcacttttcccccctatcttttgctaattgtgc 11883939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33953511 - 33953551
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaa 41  Q
    ||||||||| |||||||||||||| |||||||| |||||||    
T  33953511 atctgaaactttagaaacttaaaggatctatctgaaacaaa 33953551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42430665 - 42430719
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  42430665 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 42430719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44449068 - 44448986
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaatttg 82  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||||| |||||| || | |||||||| |||||||||||||    
T  44449068 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaatttaaaggacccggggagatatttggcctaatttg 44448986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 47332406 - 47332353
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  47332406 atctgaaaccttagaaacttaaatgatctatctaaaacaaacatgaaacttaaa 47332353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35127509 - 35127458
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaactta 52  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  35127509 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaactta 35127458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 48840287 - 48840338
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  48840287 tgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 48840338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3173293 - 3173239
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  3173293 atctgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaag 3173239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18942366 - 18942312
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  18942366 atctgaaacctcagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 18942312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22564012 - 22564082
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| | |||||| |||||||| | |||||||||| |||||||||| ||||    
T  22564012 atctgaaaccttagaaacttaaaggacctatctgaaacaaacgttaaacttaaaggactcagggaggtatt 22564082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37043047 - 37042993
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  37043047 atctgaaaccttagaaacttaaagcatctatcctaaacaaacatgaaacttaaag 37042993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 39305038 - 39304987
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  39305038 tgaaaccttaaaaacttaaagaatctatctgaaacaaacgtgaaacttaaag 39304987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42759012 - 42758933
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaat 79  Q
    ||||||||||||| |||||||||  |||||||| ||||| ||||||||||||||| || ||||||| || ||||||||||    
T  42759012 atctgaaaccttataaacttaaaagatctatctgaaacatacatgaaacttaaaggacccagggaggtatttggcctaat 42758933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18942603 - 18942657
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| || ||||| |||||||||||||||||||||    
T  18942603 atctgaaaccttataaacttaaaggatttatctgaaacaaacatgaaacttaaag 18942657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44941068 - 44941014
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  44941068 atcttaaaccttagaaacttaaatgatctatttaaaacaaacatgaaacttaaag 44941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45324936 - 45325006
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||| ||||||||| |||| |||||||||||| |||||| |||||||||  |||||||||| ||||    
T  45324936 atctgaaactttagaaactcaaaggatctatctaaaagaaacataaaacttaaaagactcagggaggtatt 45325006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45909979 - 45910029
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaactt 51  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  45909979 atctgaaaccttagaaacttaaaggatctatctgaaacaaatatgaaactt 45910029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47193544 - 47193598
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  47193544 atctaaaaccttagaaacttaaaagatctatctaaaacatacatgaaacttaaag 47193598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9907840 - 9907893
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||    
T  9907840 atctgaaactttagaaacttaaaggatctatctgaaataaacatgaaacttaaa 9907893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45443422 - 45443486
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcaggga 65  Q
    ||||||||||| | |||||||||| | ||||||||||||||| |||||||||||| || ||||||    
T  45443422 atctgaaacctcaaaaacttaaaggacctatctaaaacaaacgtgaaacttaaaggacccaggga 45443486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 29036254 - 29036203
Alignment:
Q  3 ctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||| |||||||| | |||||||||    
T  29036254 ctgaaaccttagaaacttaaagaacctatcttaaacaaacttcaaacttaaa 29036203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 30648271 - 30648220
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| |||||||| | | |||||||||||||||||    
T  30648271 tgaaaccttagaaacttaaaggatctatctgacataaacatgaaacttaaag 30648220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6723502 - 6723556
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| ||||||||||||||||| | |||||||| |||||||||| ||||||||||    
T  6723502 atctaaaaccttagaaacttaacggatctatctgaaacaaacataaaacttaaag 6723556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8919768 - 8919822
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  |||||||| ||| ||| |||||||||||||    
T  8919768 atctgaaaccttagaaacttaaaagatctatctgaaataaatatgaaacttaaag 8919822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10470578 - 10470524
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  |||||||| |||||||||| || |||||||    
T  10470578 atctgaaaccttagaaacttaaatgatctatctgaaacaaacataaatcttaaag 10470524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18808149 - 18808219
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||| ||||||||||||| ||||| | ||||||||||||||| ||||||||||| |||  |||||| ||||    
T  18808149 atctaaaaccttagaaacataaaggacctatctaaaacaaacgtgaaacttaaaaaacctagggaggtatt 18808219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18942543 - 18942597
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||| ||||||||||||||| |||||||  |||||||| ||||||||||||    
T  18942543 atctgaaatcttagaaacttaaaggatctatccgaaacaaacttgaaacttaaag 18942597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22563775 - 22563721
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||| ||||||  || ||||||||| |||||||||||||||||    
T  22563775 atctgaaaccttagaaccttaaatgatatatctaaaataaacatgaaacttaaag 22563721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30648482 - 30648536
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||| ||||||||||| |||||||| | ||| |||||||||||||||    
T  30648482 atctgaaaccttggaaacttaaaggatctatctgacacacacatgaaacttaaag 30648536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41718362 - 41718416
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| |||||||| ||| |||||||| ||||||||||||||| ||||||||||||    
T  41718362 atctaaaaccttataaatttaaagaacctatctaaaacaaacgtgaaacttaaag 41718416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46855304 - 46855358
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||| | |||||||||| |||||||| |||||||||| ||||||||||    
T  46855304 atctgaaacctcataaacttaaaggatctatctgaaacaaacataaaacttaaag 46855358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10097017 - 10096964
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||||||||||| |||||| |||||| | |||||||||| |||||||||    
T  10097017 atctgaaaccttagaaatttaaaggatctatttgaaacaaacataaaacttaaa 10096964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22642148 - 22642201
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| | || ||| |||||||| |||||||||||    
T  22642148 atctgaaaccttagaaacttaaaggacctgtctgaaacaaacgtgaaacttaaa 22642201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 45443245 - 45443188
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    ||||||||||||| |||||||||  || ||||| ||||| ||||||||||||||||||    
T  45443245 atctgaaaccttaaaaacttaaatgatttatctgaaacagacatgaaacttaaagaac 45443188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 37393383 - 37393335
Alignment:
Q  7 aaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||| ||||||| || |||||||| |||||||||||||||||||||    
T  37393383 aaccttaaaaacttagaggatctatctgaaacaaacatgaaacttaaag 37393335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29036195 - 29036136
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactc 60  Q
    |||| ||||||| ||||||||||| || ||||| ||||||| ||||||||||||| ||||    
T  29036195 atctaaaacctttgaaacttaaaggatatatctgaaacaaatatgaaacttaaaggactc 29036136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36986989 - 36986938
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatct-aaaacaaacatgaaactt 51  Q
    ||||||||||||| |||||||||||| |||||| ||||||||| ||||||||    
T  36986989 atctgaaaccttaaaaacttaaagaacctatctaaaaacaaacgtgaaactt 36986938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3173353 - 3173299
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  ||||||||  |||||||||||    
T  3173353 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaag 3173299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29036432 - 29036486
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  |||||||  ||||||||||||    
T  29036432 atctgaaaccttagaaacttaaaggacctatcagaaacaaatgtgaaacttaaag 29036486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35127744 - 35127814
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||| |||||||||| |||||| |  |||||||||||||| |||||||||||  || ||||||| ||||    
T  35127744 atctgataccttagaaatttaaaggacatatctaaaacaaacgtgaaacttaaaagacacagggaggtatt 35127814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37043294 - 37043348
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||||| |||||  ||||||||   ||||||||||    
T  37043294 atctgaaaccttagaaacttaaagaacctatccgaaacaaactcaaaacttaaag 37043348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37043353 - 37043407
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| ||||||| |||||  |||||||| ||||||| |||||||||||||    
T  37043353 atctgaaactttagaaatttaaaagatctatctgaaacaaatatgaaacttaaag 37043407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42759072 - 42759018
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  | |||||| ||||||||  |||||||||||    
T  42759072 atctgaaaccttagaaacttaaatgacctatctgaaacaaactcgaaacttaaag 42759018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42759249 - 42759319
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||  | |||| | ||| |||| |||||||||||| || ||||||| ||||    
T  42759249 atctgaaaccttagaaacttaaaagacctatatgaaataaacgtgaaacttaaaggacccagggaggtatt 42759319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44941245 - 44941299
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||| ||||||||||||||| | ||||| |||||||||  |||||||||||    
T  44941245 atctgaaatcttagaaacttaaaggacctatccaaaacaaactcgaaacttaaag 44941299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 45203698 - 45203640
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaact 59  Q
    |||||||||||||||||||||||| |||||||  ||| ||||   ||||||||||||||    
T  45203698 atctgaaaccttagaaacttaaaggatctatccgaaataaactcaaaacttaaagaact 45203640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45324876 - 45324930
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| | |||||| ||||||||  |||||||||||    
T  45324876 atctgaaaccttaaaaacttaaaggacctatctgaaacaaactcgaaacttaaag 45324930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 37393699 - 37393748
Alignment:
Q  5 gaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||| |||||||||| | ||||||||||||||| ||||| |||||    
T  37393699 gaaaccttaaaaacttaaaggacctatctaaaacaaacgtgaaatttaaa 37393748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44941128 - 44941075
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||||  ||| |||| | |||||||||    
T  44941128 atctgaaaccttagaaacttaaaggatctatccgaaataaacttcaaacttaaa 44941075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 48840138 - 48840097
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaac 42  Q
    |||||||||||||||||||||||| |||||||  ||||||||    
T  48840138 atctgaaaccttagaaacttaaaggatctatccgaaacaaac 48840097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 10097128 - 10097080
Alignment:
Q  8 accttagaaacttaaagaatctatctaaaacaaacatgaaacttaaaga 56  Q
    ||||||||||||||||| | |||||| ||| |||| |||||||||||||    
T  10097128 accttagaaacttaaaggacctatctgaaataaacttgaaacttaaaga 10097080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 18925059 - 18925103
Alignment:
Q  186 tttggcttatttgcacttttctcccatatcttttgctaactgtgc 230  Q
    ||||||||| |||||||||||| || ||||||||||||| |||||    
T  18925059 tttggcttaattgcacttttcttccctatcttttgctaattgtgc 18925103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 36987088 - 36987124
Alignment:
Q  19 ttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||| |||||||| |||||||||||||||||||||    
T  36987088 ttaaaggatctatctgaaacaaacatgaaacttaaag 36987124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 41718078 - 41718026
Alignment:
Q  6 aaaccttagaaacttaaaga-atctatctaaaacaaacatgaaacttaaagaa 57  Q
    ||||||| |||||||||| | |||||||| |||||||||||| ||||||||||    
T  41718078 aaacctttgaaacttaaaaagatctatctgaaacaaacatgatacttaaagaa 41718026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 7e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5985846 - 5985776
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| || ||||||| ||||    
T  5985846 atctgaaaccttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaaggacccagggaggtatt 5985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4799593 - 4799647
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  4799593 atctgaaaccttagaaacttaaatgatctatctgaaacaaacatgaaacttaaag 4799647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 9049797 - 9049847
Alignment:
Q  5 gaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  9049797 gaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 9049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14942321 - 14942267
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||    
T  14942321 atctgaaaccttagaaatttaaaggatctatctaaaacaaacgtgaaacttaaag 14942267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24012544 - 24012598
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  24012544 atctgaaaccttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaag 24012598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 29134977 - 29134926
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  29134977 tgaaaccttaaaaacttaaaggatctatctgaaacaaacatgaaacttaaag 29134926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4799387 - 4799333
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| |||||||||||||| |||||||| |||||||| ||||||||||||    
T  4799387 atctgaaactttagaaacttaaaggatctatctgaaacaaacgtgaaacttaaag 4799333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5986063 - 5986117
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||| |||||||||||||||||||||| ||||| ||| ||| |||||||||||||    
T  5986063 atctaaaaccttagaaacttaaagaatttatctgaaataaatatgaaacttaaag 5986117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7675634 - 7675564
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||| |||||||||||   ||||  |||||||| |||||||||||| ||||| |||||||||    
T  7675634 atctgaaaccttaaaaacttaaagatcatatcggaaacaaacgtgaaacttaaaggactcatggagatatt 7675564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33041033 - 33041087
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| | |||||| |||||||| ||||||||||||    
T  33041033 atctgaaaccttacaaacttaaaggacctatctgaaacaaacgtgaaacttaaag 33041087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 4997712 - 4997661
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||| |||||||||| || ||| |||||||||| ||||||||||||    
T  4997712 tgaaaccttaaaaacttaaaggatttatttaaaacaaacgtgaaacttaaag 4997661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 7858649 - 7858610
Alignment:
Q  15 aaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  7858649 aaacttaaaggatctatctgaaacaaacatgaaacttaaa 7858610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5985906 - 5985852
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  |||||||| | ||||||||||    
T  5985906 atctgaaaccttagaaacttaaaggacctatccgaaacaaacttaaaacttaaag 5985852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7858694 - 7858640
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  |||||||| | ||||||||||    
T  7858694 atctgaaaccttagaaacttaaaggaactatccgaaacaaacttcaaacttaaag 7858640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9049754 - 9049704
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaactt 51  Q
    ||||||||||||| |||||||||| | |||||||||| |||| ||||||||    
T  9049754 atctgaaaccttaaaaacttaaaggacctatctaaaataaacttgaaactt 9049704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29135040 - 29134986
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| |||||||||||||| |||||||  ||||||||  |||||||||||    
T  29135040 atctgaaactttagaaacttaaaggatctatccgaaacaaactcgaaacttaaag 29134986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 33033223 - 33033177
Alignment:
Q  6 aaaccttagaaacttaaagaatctatctaaaacaaacatgaaactta 52  Q
    ||||||||||||||||||  | ||||||||||||||| |||||||||    
T  33033223 aaaccttagaaacttaaatgacctatctaaaacaaacgtgaaactta 33033177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 3403714 - 3403758
Alignment:
Q  186 tttggcttatttgcacttttctcccatatcttttgctaactgtgc 230  Q
    ||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  3403714 tttggcttaattgcacttttcccccctatcttttgctaattgtgc 3403758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4965093 - 4965147
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  4965093 atctgaaaccttagaaacttaaatgatctatctaaaacaaacatgaaacttaaag 4965147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20492046 - 20492100
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  20492046 atctgaaaccttagaaacttaaaggatctatctgaaacaaacatgaaacttaaag 20492100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39834299 - 39834369
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||||||||||| |||||||||  ||||||||||||||||| ||||||||||||||| |||||| |||||    
T  39834299 atctgaaaccttataaacttaaaagatctatctaaaacaaacgtgaaacttaaagaacccagggaaatatt 39834369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 49113209 - 49113270
Alignment:
Q  2 tctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagg 63  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||    
T  49113209 tctgaaaccttagaaacttaaaggatctatctgaaataaacatgaaacttaaaggactcagg 49113270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1102909 - 1102963
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  1102909 atctgaaaccttagaaacttaaagggtctatctaaaacaaatatgaaacttaaag 1102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1695778 - 1695724
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  1695778 atctgaaaccttagaaacttaaaggatctatctgaaacaaacataaaacttaaag 1695724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39834061 - 39833991
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| | |||||| |||||||| |||||||||||||||  |||||| ||||    
T  39834061 atctgaaaccttagaaacttaaaggacctatctgaaacaaacgtgaaacttaaagaacctagggaggtatt 39833991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 32712235 - 32712182
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||||||||||||    
T  32712235 atctgaaatcttagaaacttaaaggatctatctgaaacaaacatgaaacttaaa 32712182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41810974 - 41811026
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  41810974 atctgaaaccttagaaacttaaag-atctatctgaaacaaacatgaaacttaaa 41811026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1102670 - 1102614
Alignment:
Q  2 tctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||| |||||||||    
T  1102670 tctgaaaccttagaaatttaaaggacctatctaaaacaaacatgaaatttaaagaac 1102614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 4764893 - 4764825
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatct-aaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    ||||| ||||||||||||||| |||||||| |||| ||||||||||||||||| |||| ||||||||||    
T  4764893 tgaaatcttagaaacttaaaggatctatctgaaaaaaaacatgaaacttaaaggactcggggagatatt 4764825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41810798 - 41810734
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcaggga 65  Q
    ||||||||||||||||||||||| || |||||| |||||||| |||||||||||  |||||||||    
T  41810798 atctgaaaccttagaaacttaaataacctatctgaaacaaacgtgaaacttaaatgactcaggga 41810734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5739445 - 5739375
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| |  ||||| |||||||| |||||||||||| |  ||||||||||||    
T  5739445 atctgaaaccttagaaacttaaaggacatatctgaaacaaacgtgaaacttaaaggatccagggagatatt 5739375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20491773 - 20491719
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||    
T  20491773 atctgaaaccttaaaaacttaaaagatctatccaaaacaaacatgaaacttaaag 20491719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45721200 - 45721146
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||  ||||| || |||||||||||||||||||||    
T  45721200 atctgaaaccttagaaacttaaaagatctacctgaaacaaacatgaaacttaaag 45721146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 4765138 - 4765187
Alignment:
Q  6 aaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  4765138 aaaccttagaaacttaaagaacctatctgaaacaaacgtgaaacttaaag 4765187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4974895 - 4974830
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggag 66  Q
    |||| ||||||||||||||||||| |||||||| |||||||||| ||| |||||| |||| |||||    
T  4974895 atctaaaaccttagaaacttaaaggatctatctgaaacaaacataaaatttaaaggactcggggag 4974830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5739524 - 5739577
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||  |||||||| |||||||| |||||||||||    
T  5739524 atctgaaaccttagaaacttaaaagatctatctgaaacaaacgtgaaacttaaa 5739577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29386393 - 29386445
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaa 53  Q
    ||||||||| |||||||||||||  |||||||| |||||||||||||||||||    
T  29386393 atctgaaactttagaaacttaaatgatctatctgaaacaaacatgaaacttaa 29386445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 18088319 - 18088370
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||| ||||||||||||||  || |||||||||||||||||||||||||||    
T  18088319 tgaaatcttagaaacttaaatgatttatctaaaacaaacatgaaacttaaag 18088370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 29987514 - 29987565
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  29987514 tgaaaccttagaaacttaaaggatttatctgaaacaaacataaaacttaaag 29987565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5277363 - 5277309
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||| |||||||||||  |||||||| ||||||||| |||||||||||    
T  5277363 atctgaaacctcagaaacttaaaagatctatctgaaacaaacaggaaacttaaag 5277309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18088140 - 18088086
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||| ||||||||   ||||||||||    
T  18088140 atctgaaaccttagaaacttaaaggatctatctgaaacaaactcaaaacttaaag 18088086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29987274 - 29987220
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||| | |||||| |||||||| ||||||||||||    
T  29987274 atctgaaaccttaaaaacttaaaggacctatctgaaacaaacgtgaaacttaaag 29987220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38823770 - 38823824
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| || ||||||||||| |||||||| |||||||||| ||||||||||    
T  38823770 atctgaaactttggaaacttaaaggatctatctgaaacaaacataaaacttaaag 38823824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42371753 - 42371807
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||| |||| |||||| |||||||| |||||||||||||| ||||||    
T  42371753 atctgaaaccttggaaatttaaaggatctatctgaaacaaacatgaaatttaaag 42371807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15615439 - 15615492
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| | |||||| ||||||||  ||||||||||    
T  15615439 atctgaaaccttagaaacttaaaggacctatctgaaacaaactcgaaacttaaa 15615492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20491986 - 20492039
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| | |||||| ||||||||  ||||||||||    
T  20491986 atctgaaaccttagaaacttaaaggacctatctgaaacaaactcgaaacttaaa 20492039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 3339188 - 3339254
Alignment:
Q  4 tgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||| ||||||||||||||| ||||||| |||||||  |||||||||||| ||| |||||| ||||    
T  3339188 tgaaacattagaaacttaaaga-tctatctgaaacaaaagtgaaacttaaaggacttagggaggtatt 3339254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 41524675 - 41524627
Alignment:
Q  5 gaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| ||||||    
T  41524675 gaaaccttaaaaacttaaa--atctatctaaaacaaacatgaaaattaaag 41524627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1695838 - 1695784
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||| | |||||||| | ||||||||||    
T  1695838 atctgaaaccttagaaacttaaaggacctatttgaaacaaacttcaaacttaaag 1695784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4974955 - 4974901
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||  |||||||| | ||||||||||    
T  4974955 atctgaaaccttagaaacttaaaggacctatccgaaacaaacttcaaacttaaag 4974901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48074384 - 48074438
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  |||||||||||    
T  48074384 atctgaaaccttagaaacttaaaggacatatctgaaacaaactcgaaacttaaag 48074438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1102731 - 1102674
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaac 58  Q
    |||||||| |||||||||||||||   |||||| ||||||||  ||||||||||||||    
T  1102731 atctgaaatcttagaaacttaaagggcctatctgaaacaaactcgaaacttaaagaac 1102674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39834239 - 39834280
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaac 42  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  39834239 atctgaaaccttagaaacttaaatgacctatctaaaacaaac 39834280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 48074452 - 48074497
Alignment:
Q  10 cttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||||| | |||||| |||||||||| ||||||||||    
T  48074452 cttagaaacttaaaggacctatctgaaacaaacataaaacttaaag 48074497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49588132 - 49588079
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    |||||||||||||||||||||||| | |||||  ||||||||  ||||||||||    
T  49588132 atctgaaaccttagaaacttaaaggacctatccgaaacaaactcgaaacttaaa 49588079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23724 - 23670
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||    
T  23724 atctgaaaccttaaaaacttaaatgatctatctaaaacaaacatgaaacttaaag 23670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23961 - 24014
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaa 54  Q
    ||||||||||||||||| |||||| |||||||| |||||||| |||||||||||    
T  23961 atctgaaaccttagaaatttaaaggatctatctgaaacaaacgtgaaacttaaa 24014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23901 - 23955
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||||||| |||||||||||| |||||  |||||||| ||||||| ||||    
T  23901 atctgaaaccttaaaaacttaaagaacctatccgaaacaaacttgaaactgaaag 23955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11786 - 11732
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  11786 atctgaaaccttcgaaacttaaaggatctatctgaaacaaacatgaaacttaaag 11732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 60544 - 60474
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagatatt 71  Q
    |||||||||||||||||||||||| | |||||| |||||||| |||||||||||| || ||||||| ||||    
T  60544 atctgaaaccttagaaacttaaagtacctatctgaaacaaacgtgaaacttaaaggacccagggaggtatt 60474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 60760 - 60837
Alignment:
Q  5 gaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata-ttggcctaattt 81  Q
    |||||||||||||||||||  |||||||| ||||||| || |||||||||| ||||| |||| || ||||||||||||    
T  60760 gaaaccttagaaacttaaatgatctatctgaaacaaatataaaacttaaaggactcaaggaggtatttggcctaattt 60837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22267 - 22199
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaagaactcagggagata 69  Q
    |||||||  ||||||||||||||| |||||||| ||||||| ||||||||||||| || ||||||||||    
T  22267 atctgaagacttagaaacttaaaggatctatctgaaacaaatatgaaacttaaaggacccagggagata 22199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23435 - 23489
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||| ||||||||||||||| |||||| | ||||||||  |||||||||||    
T  23435 atctgaaatcttagaaacttaaaggatctatttgaaacaaactcgaaacttaaag 23489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 202350 - 202296
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||| ||||||||||||||| |||||| | |||||||||||||||||||||    
T  202350 atctgaaatcttagaaacttaaaggatctatttgaaacaaacatgaaacttaaag 202296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 202527 - 202581
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| |||||||  ||||||||  |||||||||||    
T  202527 atctgaaaccttagaaacttaaaggatctatccgaaacaaactcgaaacttaaag 202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32455 - 32502
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaac 49  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  32455 atctgaaaccttagaaacttaaag-atctatctgaaacaaacatgaaac 32502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32308 - 32254
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||||||||||||||||| | |||||| ||| ||||  |||||||||||    
T  32308 atctgaaaccttagaaacttaaaggacctatctgaaagaaactcgaaacttaaag 32254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21885 - 21831
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    |||||||||| ||||||||||||| | |||||  |||||||| ||||||||||||    
T  21885 atctgaaaccgtagaaacttaaaggacctatccgaaacaaacgtgaaacttaaag 21831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22082 - 22136
Alignment:
Q  1 atctgaaaccttagaaacttaaagaatctatctaaaacaaacatgaaacttaaag 55  Q
    ||||||||| ||||||||||||||  || |||||| | |||||||||||||||||    
T  22082 atctgaaactttagaaacttaaagggtcaatctaagataaacatgaaacttaaag 22136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 438927 - 438971
Alignment:
Q  186 tttggcttatttgcacttttctcccatatcttttgctaactgtgc 230  Q
    ||||||||| ||||||||||| ||| ||||||||||||| |||||    
T  438927 tttggcttaattgcacttttcccccctatcttttgctaattgtgc 438971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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