View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16235_high_16 (Length: 389)

Name: NF16235_high_16
Description: NF16235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16235_high_16
NF16235_high_16
[»] chr7 (3 HSPs)
chr7 (84-376)||(46467611-46467904)
chr7 (84-300)||(15890361-15890576)
chr7 (94-320)||(8827056-8827282)
[»] scaffold0004 (2 HSPs)
scaffold0004 (77-320)||(353764-354012)
scaffold0004 (77-320)||(113044-113291)
[»] chr4 (3 HSPs)
chr4 (77-320)||(37439661-37439909)
chr4 (114-299)||(54001424-54001610)
chr4 (167-218)||(39072738-39072789)
[»] chr3 (4 HSPs)
chr3 (77-320)||(3274096-3274344)
chr3 (77-320)||(3277506-3277754)
chr3 (77-320)||(39925466-39925712)
chr3 (79-320)||(5026999-5027243)
[»] chr1 (4 HSPs)
chr1 (77-320)||(16851257-16851505)
chr1 (100-284)||(17364824-17365008)
chr1 (77-320)||(21198291-21198540)
chr1 (77-320)||(52986892-52987141)
[»] chr5 (3 HSPs)
chr5 (77-320)||(14404623-14404869)
chr5 (77-320)||(40665983-40666230)
chr5 (111-298)||(25685758-25685948)
[»] chr8 (3 HSPs)
chr8 (77-320)||(39038390-39038638)
chr8 (161-213)||(186513-186565)
chr8 (243-320)||(186377-186458)
[»] scaffold0303 (1 HSPs)
scaffold0303 (77-320)||(21060-21306)
[»] scaffold0097 (1 HSPs)
scaffold0097 (99-320)||(30832-31058)
[»] chr2 (3 HSPs)
chr2 (99-320)||(20727003-20727229)
chr2 (77-290)||(24780043-24780260)
chr2 (91-300)||(11023360-11023572)
[»] chr6 (4 HSPs)
chr6 (79-320)||(18677416-18677663)
chr6 (99-320)||(12352401-12352623)
chr6 (107-319)||(14859074-14859282)
chr6 (166-320)||(24170367-24170526)
[»] scaffold0882 (1 HSPs)
scaffold0882 (77-320)||(221-468)
[»] scaffold0766 (1 HSPs)
scaffold0766 (77-320)||(2935-3182)
[»] scaffold0031 (1 HSPs)
scaffold0031 (77-320)||(89161-89406)
[»] scaffold0047 (1 HSPs)
scaffold0047 (99-320)||(9070-9295)
[»] scaffold1744 (1 HSPs)
scaffold1744 (161-320)||(268-432)


Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 84 - 376
Target Start/End: Original strand, 46467611 - 46467904
Alignment:
Q  84 tactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgat 183  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46467611 tactacatagttgagttgtagtacttatgcttcaatttgttatatctacacatttgatgtattattttattgttgtaatttcttttgtattgggtgcgat 46467710  T
Q  184 cccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagc 283  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||     
T  46467711 ctcaaggttttaagagaggtgatatctcttagttttagagactatcctacaaagcattgttttgtttggagagtgctcattatttataaaggttactagt 46467810  T
Q  284 ttatcctgtttaaaag--cggttagtgaaaatctcaaggatagttcccccttatgttaccattaaatttgaagtatgtgctcttaacattatatt 376  Q
    ||||||||||||||||   ||||||||||||||| |||||||| | |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  46467811 ttatcctgtttaaaagtttggttagtgaaaatcttaaggatagct-ccccttgtgttaccattaaattttaagtatgtgctcttaacattatatt 46467904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 84 - 300
Target Start/End: Original strand, 15890361 - 15890576
Alignment:
Q  84 tactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtattgggtgcga 182  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  15890361 tactacatagttgagttgtag--cttgtgcttcaatttgttatatctacccatttggtgtattattttattgttgtaattcttatttgtattgggtgcga 15890458  T
Q  183 tcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactag 282  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| |  |||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  15890459 tcccaaggtttcaagagaggtgatatctcttggttttagagactcttttacaaaggactgttttgtttggagagtgctcgttatttgtaaaggttactag 15890558  T
Q  283 cttatcctgtttaaaagc 300  Q
    ||||||||  ||||||||    
T  15890559 cttatcctaattaaaagc 15890576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 94 - 320
Target Start/End: Original strand, 8827056 - 8827282
Alignment:
Q  94 ttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgatcccaaggttt 193  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| | |||| ||||||| ||||| |||    
T  8827056 ttgagttgtagta-ttattcttcaatttgttatatctacacatttggtgtattattttattattgttttttcttt-gcattgtgtgcgattccaagattt 8827153  T
Q  194 aaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttatcctgtt 293  Q
     ||||||||||||||||||| | |||| || || | |||||||||||  ||||||||||||| |||||||  ||||||||| |||||||||| |||| ||    
T  8827154 caagagaggtgatatctcttgggtttataggctcttctacaaaagatatttttgtttggagaatgctcgtattttgtaaagtttactagcttctcctatt 8827253  T
Q  294 taaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||||  || |||||||||||||||||    
T  8827254 taaaagcttggctagtgaaaatctcaagg 8827282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 354012 - 353764
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtatt 174  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | |||||||||    
T  354012 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattctattttgtatt 353913  T
Q  175 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 273  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  353912 gggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 353813  T
Q  274 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  353812 ggttactagcttatcctgtttaaaagctaggttagtgaaaatctcaagg 353764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 113291 - 113044
Alignment:
Q  77 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 175  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |||||| | | ||||||||||    
T  113291 tattttatactacatagttgagttgtagtaattgtgcgtcaatttgttatatctacacatttggtgtattactttattattgtaactctattttgtattg 113192  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 274  Q
    |||| |||||||| |||| ||||||||||||||||||| | || ||||||| | ||||||| |||||||||||||| |||||||||| |||||| |||||    
T  113191 ggtgtgatcccaaagtttcaagagaggtgatatctcttgggttaagagactcttctacaaaggattgttttgtttgaagagtgctcgcttatttataaag 113092  T
Q  275 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  113091 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 113044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 5e-75; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 37439661 - 37439909
Alignment:
Q  77 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtatt 174  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||| ||||||   || |||||||||    
T  37439661 tattttatactacatagttgagttgtagtagttgtgcttgaatttgttatatctacacatttggtgtattgctttattattgtaactcttattttgtatt 37439760  T
Q  175 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaa 273  Q
    | ||||||||||||  ||| ||||||||||||||||||| | |||||||||| | ||||||| |||| ||||||||| |||||||||| |||||||||||    
T  37439761 gtgtgcgatcccaaattttcaagagaggtgatatctcttgggtttagagactcttctacaaaggattattttgtttgaagagtgctcgcttatttgtaaa 37439860  T
Q  274 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  37439861 ggttactagcttatcctgtttaaaagctaggttagtgaaaatctcaagg 37439909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 114 - 299
Target Start/End: Complemental strand, 54001610 - 54001424
Alignment:
Q  114 ttcaatttgttatatctacacatttggtgtattatttta--ttgttgtaatttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctc 211  Q
    |||||||||||||||||||| |||||||||| |  ||||  ||||| || ||| ||| ||||||||||||||| |||||||  | |||| ||||||||||    
T  54001610 ttcaatttgttatatctacatatttggtgtaatcatttaaattgttata-tttatttggtattgggtgcgatctcaaggttccatgagatgtgatatctc 54001512  T
Q  212 ttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttatcctgtttaaaag 299  Q
    || |||||||| | | | ||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  54001511 ttggttttagaaagtcttctacaaatgattgttttgtttggagaatgctcgttatttggaaaggttattagcttatcctatttaaaag 54001424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 39072789 - 39072738
Alignment:
Q  167 tttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttt 218  Q
    |||||||||| ||||||||||| |||| || |||||||||||||||| ||||    
T  39072789 tttgtattggatgcgatcccaaagtttcaaaagaggtgatatctcttggttt 39072738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 3274096 - 3274344
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 174  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  3274096 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 3274195  T
Q  175 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 273  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  3274196 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 3274295  T
Q  274 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  3274296 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 3274344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 3277506 - 3277754
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 174  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  3277506 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 3277605  T
Q  175 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 273  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  3277606 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 3277705  T
Q  274 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  3277706 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 3277754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 39925466 - 39925712
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 175  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  39925466 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 39925564  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 274  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  39925565 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaag 39925664  T
Q  275 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  39925665 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 39925712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 79 - 320
Target Start/End: Complemental strand, 5027243 - 5026999
Alignment:
Q  79 ttttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattggg 177  Q
    |||||||||| |||||| |  ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |  |||| |||||||    
T  5027243 ttttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattattttattattataacta-ttttatattggg 5027145  T
Q  178 tgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaaggt 276  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| || | ||||||| ||||||||||||||||||||||| | ||| |||||||| |    
T  5027144 tgcgatcccaaggtttcaagagaggtgatatctcttaggtttagaggctcttctacaaaggattgttttgtttggagagtgcttgctatcttgtaaagat 5027045  T
Q  277 tactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  5027044 tactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 5026999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 16851257 - 16851505
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 174  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  16851257 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 16851356  T
Q  175 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 273  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  16851357 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 16851456  T
Q  274 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  16851457 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 16851505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 100 - 284
Target Start/End: Original strand, 17364824 - 17365008
Alignment:
Q  100 tgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgatcccaaggtttaaagag 199  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || | | ||||||||||||||||     
T  17364824 tgtagttcttgtgcttcaatatgttatatctacacatttgctgtatcattttattgttgtaatttcttttgtatttggggtggtcccaaggtttaaagaa 17364923  T
Q  200 aggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagct 284  Q
    |||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17364924 aggtgatatctcttaggtttagagactcttctacaaatgattgttttgtttggagagtgctcgttatttgtaaaggttactagct 17365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 21198291 - 21198540
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtat 173  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |  | ||||||||    
T  21198291 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacatatttggtgtattactttattattgtaactcttattttgtat 21198390  T
Q  174 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaa 272  Q
     |||||||||||||| |||| |||||||||||||||||||   |||||||||| | ||||||| |||||||||||||| ||||||||||  |||||||||    
T  21198391 agggtgcgatcccaaagtttcaagagaggtgatatctcttgagtttagagactcttctacaaaggattgttttgtttgaagagtgctcgcatatttgtaa 21198490  T
Q  273 aggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  21198491 aggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 21198540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 52987141 - 52986892
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtat 173  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||| ||   || ||||||||    
T  52987141 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgcaactcttattttgtat 52987042  T
Q  174 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgtta-tttgtaa 272  Q
    |||| || ||||||| |||| |||||||||||| |||||| | ||||||| || | ||||||| | |  |||||||||||||||||||| || |||||||    
T  52987041 tgggcgcaatcccaaagtttcaagagaggtgatctctcttgggtttagaggctcttctacaaagggtaattttgtttggagagtgctcgctattttgtaa 52986942  T
Q  273 aggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    ||||||||||||||||| ||||||||||   |||||||||||||||||||    
T  52986941 aggttactagcttatcccgtttaaaagctaagttagtgaaaatctcaagg 52986892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 8e-74; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 14404869 - 14404623
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 175  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  14404869 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 14404771  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 274  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  14404770 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaag 14404671  T
Q  275 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  14404670 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 14404623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 40666230 - 40665983
Alignment:
Q  77 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtattg 175  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||| || || |||||| |||||| | | ||||||||||    
T  40666230 tattttatactacatagttgagttgtagtaattgtgcgtcaatttattatatctacacatttggtatactactttattattgtaactctattttgtattg 40666131  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 274  Q
    |||| ||||||||||||| |||||||||||||||||||   ||||||| || | ||||||| |||||||||||||| |||||| ||| ||||||||||||    
T  40666130 ggtgtgatcccaaggtttcaagagaggtgatatctcttgagtttagaggctcttctacaaatgattgttttgtttgaagagtgttcgcttatttgtaaag 40666031  T
Q  275 gttactagcttatcctgtttaaaag--cggttagtgaaaatctcaagg 320  Q
    |||| |||||||||| |||||||||   ||||||||||||||||||||    
T  40666030 gttattagcttatcccgtttaaaagttaggttagtgaaaatctcaagg 40665983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 111 - 298
Target Start/End: Original strand, 25685758 - 25685948
Alignment:
Q  111 tgcttcaatttgttatatctacacatttggtgtattatttta-ttgttgtaatttctt--ttgtattgggtgcgatcccaaggtttaaagagaggtgata 207  Q
    |||||||||||||| |||||||| |||||||||| | ||||| || ||||| ||||||  ||| ||| |||| ||||||||| ||| |||||||||||||    
T  25685758 tgcttcaatttgttttatctacatatttggtgtaatcttttaattattgta-tttcttatttgcatttggtgtgatcccaagatttcaagagaggtgata 25685856  T
Q  208 tctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaaggttactagcttatcctgtttaaaa 298  Q
    |||||| | ||||||| || | ||| ||| |||  ||| |||||||| ||||||| ||| |||||||||||||||| |||||||||||||||    
T  25685857 tctcttggatttagaggcttttctataaaggataatttcgtttggagtgtgctcgctatcttgtaaaggttactagattatcctgtttaaaa 25685948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 5e-72; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 39038390 - 39038638
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 174  Q
    |||||||||||| |||||| |  ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  39038390 tattttatactacatagtttatcttgtagttcttatgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 39038489  T
Q  175 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 273  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  39038490 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 39038589  T
Q  274 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  39038590 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 39038638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 186565 - 186513
Alignment:
Q  161 atttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctctt 213  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  186565 atttcttttgtattgggtgcgatcccaaagtttcaagagaggtgatatttctt 186513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 320
Target Start/End: Complemental strand, 186458 - 186377
Alignment:
Q  243 ttttgtttggagagtgctcgttattt-gtaaaggtt-actagcttatcctgtttaaaagcg--gttagtgaaaatctcaagg 320  Q
    |||||||||||||||||| | ||||| ||||||||| ||||| |||||| || |||||||   |||||||||||||||||||    
T  186458 ttttgtttggagagtgcttgctattttgtaaaggtttactagtttatcccgtataaaagctaagttagtgaaaatctcaagg 186377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 21060 - 21306
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 175  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  21060 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 21158  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 274  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||| | ||| ||||||||    
T  21159 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctagctatcttgtaaag 21258  T
Q  275 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  21259 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 21306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 99 - 320
Target Start/End: Complemental strand, 31058 - 30832
Alignment:
Q  99 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaa 196  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||| |||||| |  | ||||||||||||||||||||||| |||| ||    
T  31058 ttgtagtacttgtgtttcaatttgttatatctatatatttggtgtattactttattattgtaactcttattttgtattgggtgcgatcccaaagtttcaa 30959  T
Q  197 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 295  Q
    ||||||||||||||||| | |||||||||| |  |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  30958 gagaggtgatatctcttgggtttagagactcttttacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgttta 30859  T
Q  296 aaagc--ggttagtgaaaatctcaagg 320  Q
    |||||  ||||||||||||||||||||    
T  30858 aaagctaggttagtgaaaatctcaagg 30832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 99 - 320
Target Start/End: Complemental strand, 20727229 - 20727003
Alignment:
Q  99 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaa 196  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||| |||||| |  | ||||||||||||||||||||||| |||| ||    
T  20727229 ttgtagtacttgtgtttcaatttgttatatctatatatttggtgtattactttattattgtaactcttattttgtattgggtgcgatcccaaagtttcaa 20727130  T
Q  197 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 295  Q
    ||||||||||||||||| | |||||||||| |  |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  20727129 gagaggtgatatctcttgggtttagagactcttttacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgttta 20727030  T
Q  296 aaagc--ggttagtgaaaatctcaagg 320  Q
    |||||  ||||||||||||||||||||    
T  20727029 aaagctaggttagtgaaaatctcaagg 20727003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 77 - 290
Target Start/End: Original strand, 24780043 - 24780260
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtat 173  Q
    |||||||||||| |||||| |  |||||||  |||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |  | ||||||||    
T  24780043 tattttatactacatagtttatcttgtagtttttgtgctttaatttgttatatctacacatttggtgtattactttattattgtaactcttattttgtat 24780142  T
Q  174 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaa 272  Q
    ||||||||||||||| || | |||||||||||||||||||   ||||||| || | ||||||| ||||||||||||||||||||| ||| ||| ||||||    
T  24780143 tgggtgcgatcccaaagtatcaagagaggtgatatctcttgagtttagaggctcttctacaaatgattgttttgtttggagagtgttcgctatcttgtaa 24780242  T
Q  273 aggttactagcttatcct 290  Q
    ||||||||||||||||||    
T  24780243 aggttactagcttatcct 24780260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 300
Target Start/End: Original strand, 11023360 - 11023572
Alignment:
Q  91 tagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtattgggtgcg--atccca 187  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||| |  || |||||| |  | ||||||||||||| |  ||||||    
T  11023360 tagttgagttgtagtacttatgcttcaatttgttatatctatatatttgatgtattatatccttattgtaaatcttatttgtattgggtgtgtgatccca 11023459  T
Q  188 aggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttat 287  Q
    |||||| |||||| || |||| |||| |||||||||||| |  ||||||  ||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  11023460 aggtttcaagagaagttatatatcttggttttagagactcttttacaaagaattgttttgtttgaagagtgctcattatttgtaaatgttactagcttat 11023559  T
Q  288 cctgtttaaaagc 300  Q
    |||  ||||||||    
T  11023560 cctccttaaaagc 11023572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 7e-65; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 79 - 320
Target Start/End: Original strand, 18677416 - 18677663
Alignment:
Q  79 ttttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattg 175  Q
    |||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |  | ||||||||||    
T  18677416 ttttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaactcttattttgtattg 18677515  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 274  Q
    |||| |||||||| |||| ||||||||||||||||||| | |||||||||| | ||||||| | |||||||||||| |||||||||| |||||||||||     
T  18677516 ggtgtgatcccaaagtttcaagagaggtgatatctcttgggtttagagactcttctacaaaggtttgttttgtttgaagagtgctcgtttatttgtaaat 18677615  T
Q  275 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
     |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  18677616 attactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 18677663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 99 - 320
Target Start/End: Original strand, 12352401 - 12352623
Alignment:
Q  99 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtattgggtgcgatcccaaggtttaaa 196  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| |||| |   || |||||||||||||| |||||||| |||| ||    
T  12352401 ttgtagttcttgtgcttcaacttgttatatctacacatttggtgtattactttattattgttactcttattttgtattgggtgtgatcccaaagtttcaa 12352500  T
Q  197 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 295  Q
    ||||||||||||||||| | ||||||||||   || |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||| |||||    
T  12352501 gagaggtgatatctcttgggtttagagact---cttcaaaggattgttttgtttgaagagtgctcgcttatttgt-aatgttactagcttatcccgttta 12352596  T
Q  296 aaagc--ggttagtgaaaatctcaagg 320  Q
    |||||  ||||||||||||||||||||    
T  12352597 aaagctaggttagtgaaaatctcaagg 12352623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 107 - 319
Target Start/End: Original strand, 14859074 - 14859282
Alignment:
Q  107 cttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaagagaggtg 204  Q
    ||||||||||||||||||||||||||| ||||||||| ||  |||||| |||||| |  | |||||||||||||| |||||| | |||| ||||||||||    
T  14859074 cttgtgcttcaatttgttatatctacatatttggtgtctttctttattattgtaactcttattttgtattgggtgtgatccctaagtttcaagagaggtg 14859173  T
Q  205 atatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgtttaaaag--cg 301  Q
    ||||||||| | ||||||||||   || |     ||||||||||||| |||||||||| ||||||| ||||||||    ||||||| |||||||||   |    
T  14859174 atatctcttgggtttagagactcatcttc-----attgttttgtttgaagagtgctcgtttatttgcaaaggtta----cttatcccgtttaaaagttag 14859264  T
Q  302 gttagtgaaaatctcaag 319  Q
    ||||||||||||||||||    
T  14859265 gttagtgaaaatctcaag 14859282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 320
Target Start/End: Original strand, 24170367 - 24170526
Alignment:
Q  166 ttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgtta 265  Q
    ||||||||| |||||||||| ||||||| || ||||||||||| |||| | |||| ||  | | ||| ||| |||  |||||||||| ||||||| | ||    
T  24170367 ttttgtattaggtgcgatcctaaggtttcaaaagaggtgatatatcttgggtttaaaggttcttctataaaggataattttgtttggggagtgctagcta 24170466  T
Q  266 t-ttgtaaaggttac--tagcttatcctgtttaaaag--cggttagtgaaaatctcaagg 320  Q
    | |||||||||||||  ||| ||||| ||||||||||   ||||||||||||||||||||    
T  24170467 tcttgtaaaggttactatagtttatcttgtttaaaagtttggttagtgaaaatctcaagg 24170526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0882 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 468 - 221
Alignment:
Q  77 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 175  Q
    |||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||| |||||| | | | ||||||||    
T  468 tattttatactacatagttgagttgtagtaattgtacgtcaatttgttatatctacacatttggtgtattactttattattgtaactctatcttgtattg 369  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 274  Q
    |||| |||| |||||||| |||||| |||||||||||| | ||||||  || | ||||||| |||||||||||||| |||||||| | ||||||||||||    
T  368 ggtgtgatctcaaggtttcaagagatgtgatatctcttgggtttagaagctcttctacaaaggattgttttgtttgaagagtgcttgtttatttgtaaag 269  T
Q  275 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||||||||    
T  268 gttactggcttatcccgtttaaaagctaggttaatgaaaatctcaagg 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 77 - 320
Target Start/End: Original strand, 2935 - 3182
Alignment:
Q  77 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 175  Q
    |||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||| |||||| | | | ||||||||    
T  2935 tattttatactacatagttgagttgtagtaattgtacgtcaatttgttatatctacacatttggtgtattactttattattgtaactctatcttgtattg 3034  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 274  Q
    |||| |||| |||||||| |||||| |||||||||||| | ||||||  || | ||||||| |||||||||||||| |||||||| | ||||||||||||    
T  3035 ggtgtgatctcaaggtttcaagagatgtgatatctcttgggtttagaagctcttctacaaaggattgttttgtttgaagagtgcttgtttatttgtaaag 3134  T
Q  275 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||||||||    
T  3135 gttactggcttatcccgtttaaaagctaggttaatgaaaatctcaagg 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 77 - 320
Target Start/End: Complemental strand, 89406 - 89161
Alignment:
Q  77 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 175  Q
    |||||||||||| |||||| |  ||||||| |||||| ||||||| || ||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  89406 tattttatactacatagtttatcttgtagttcttgtgtttcaatt-gtaatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 89309  T
Q  176 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 274  Q
    ||||| |||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||| ||||||||||||||||||||| ||| ||||||||    
T  89308 ggtgcaatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggatcgttttgtttggagagtgctcgctatcttgtaaag 89209  T
Q  275 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 320  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  89208 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 89161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 99 - 320
Target Start/End: Original strand, 9070 - 9295
Alignment:
Q  99 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtattgggtgcgatcccaaggtttaaag 197  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| | | |||||||||||||| | ||||||||||| |||    
T  9070 ttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaactctattttgtattgggtgtgttcccaaggttttaag 9169  T
Q  198 agaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgtttaa 296  Q
    ||||| ||||||| || | ||||||| || | ||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||||    
T  9170 agaggcgatatcttttgggtttagaggctcttctacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgattaa 9269  T
Q  297 aagc--ggttagtgaaaatctcaagg 320  Q
    ||||  ||||| ||||||||||||||    
T  9270 aagctaggttaatgaaaatctcaagg 9295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1744 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1744
Description:

Target: scaffold1744; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 161 - 320
Target Start/End: Complemental strand, 432 - 268
Alignment:
Q  161 atttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgct 260  Q
    ||||||||||| ||||||| |||||||| |||| |||||||||||||||||||   ||||||| || | ||||||| | |  ||||||||||||||||||    
T  432 atttcttttgtgttgggtgtgatcccaaagtttcaagagaggtgatatctcttgagtttagaggctcttctacaaagggtaattttgtttggagagtgct 333  T
Q  261 cgtta--tttgtaaaggttactagcttatcctgtttaaaa-gcg--gttagtgaaaatctcaagg 320  Q
    || ||  |||||||||||||||||||||||| |||||||| ||   |||||||||||||||||||    
T  332 cgctaattttgtaaaggttactagcttatcccgtttaaaaagctaagttagtgaaaatctcaagg 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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