View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16235_high_26 (Length: 301)
Name: NF16235_high_26
Description: NF16235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16235_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 47072272 - 47072522
Alignment:
| Q |
1 |
tcttatattttctacaaatcctatatttgctacatttgtttttggagagggttttgctacatgctttattacggttgtttatatgaaataaatataactt |
100 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47072272 |
tcttatattttctacaaatcctatatttcctacatttgtttttggagagggttttgctacatgctttattacggttgtttatatgaaataaatataactt |
47072371 |
T |
|
| Q |
101 |
atgaatctaaaaatataacttataaaacgacacatttcaatgcataaaatactagataagataagaccgtacattatcatgacatttattaacttgtttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
47072372 |
atgaatctaaaaatataacttataaaacgacacatttcaatgcataaaatactagataagataagaccgtacattatcatgacacttattaacttgtttt |
47072471 |
T |
|
| Q |
201 |
acaagaaaaccaatgacattctgccaaatccttgttcatattaggaagcta |
251 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
47072472 |
acaagaaaaccaatgaaattctgccaaatccttgttcatattaggaagcta |
47072522 |
T |
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