View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16235_high_49 (Length: 210)
Name: NF16235_high_49
Description: NF16235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16235_high_49 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 26485134 - 26485310
Alignment:
| Q |
18 |
aatattgttccgaatcattaatatgattagttttctaaaattgatcttaatttatgtgtattgcagcatatcctaccatcctcaacttgggaaggtgatt |
117 |
Q |
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| T |
26485134 |
aatattgttccgaatcattaatatgattagttttctaaaattgatcttaatttatgtgtattgcagcatatcctaccatcctcaacttgggaaggtgatt |
26485233 |
T |
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| Q |
118 |
ttcaaaatcttcatagtgtagattttgatcaaggacgatcaacatcatttccttctcaaccatttacaggtagatac |
194 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26485234 |
ttcaaaatcttcatagtgtagattttgatcaaggacgatcaacatcatttccttctcaaccatttacaggtagatac |
26485310 |
T |
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