View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16235_low_12 (Length: 412)

Name: NF16235_low_12
Description: NF16235
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16235_low_12
NF16235_low_12
[»] scaffold0098 (1 HSPs)
scaffold0098 (255-393)||(44509-44647)
[»] chr6 (31 HSPs)
chr6 (255-393)||(26138390-26138528)
chr6 (255-393)||(26017635-26017774)
chr6 (255-393)||(26157008-26157147)
chr6 (255-393)||(25507320-25507458)
chr6 (256-373)||(23574910-23575027)
chr6 (255-358)||(18234089-18234192)
chr6 (296-397)||(5398996-5399096)
chr6 (256-373)||(23517585-23517702)
chr6 (264-373)||(17739358-17739467)
chr6 (256-389)||(17284281-17284414)
chr6 (297-389)||(5949867-5949959)
chr6 (297-387)||(29253753-29253842)
chr6 (313-389)||(25949102-25949177)
chr6 (255-347)||(29253662-29253754)
chr6 (255-358)||(12660733-12660836)
chr6 (263-358)||(18399903-18399998)
chr6 (313-386)||(25963702-25963774)
chr6 (313-386)||(25968349-25968421)
chr6 (255-347)||(5949958-5950050)
chr6 (313-373)||(32543037-32543097)
chr6 (255-344)||(5398905-5398995)
chr6 (264-358)||(13217570-13217664)
chr6 (256-344)||(25948995-25949084)
chr6 (256-344)||(25963595-25963684)
chr6 (256-344)||(25968242-25968331)
chr6 (255-339)||(12658260-12658344)
chr6 (255-310)||(20222194-20222249)
chr6 (255-310)||(22116178-22116233)
chr6 (256-301)||(3923381-3923426)
chr6 (264-344)||(32542938-32543019)
chr6 (256-320)||(20464003-20464067)
[»] chr7 (50 HSPs)
chr7 (255-397)||(6257739-6257881)
chr7 (297-387)||(21005695-21005785)
chr7 (20-133)||(6258003-6258116)
chr7 (297-393)||(9194220-9194316)
chr7 (297-389)||(1462334-1462426)
chr7 (255-344)||(1462243-1462332)
chr7 (255-344)||(21005787-21005876)
chr7 (297-389)||(9004395-9004486)
chr7 (256-358)||(4461012-4461114)
chr7 (297-393)||(48713238-48713335)
chr7 (255-347)||(19515686-19515778)
chr7 (255-344)||(48713147-48713236)
chr7 (313-389)||(10204468-10204543)
chr7 (313-389)||(14941945-14942020)
chr7 (313-389)||(15369538-15369613)
chr7 (313-394)||(33609492-33609573)
chr7 (313-388)||(15707457-15707531)
chr7 (313-388)||(25181186-25181260)
chr7 (297-386)||(19515599-19515687)
chr7 (313-373)||(4313017-4313077)
chr7 (255-347)||(9004304-9004396)
chr7 (313-388)||(35964459-35964533)
chr7 (314-372)||(649018-649076)
chr7 (313-373)||(4307647-4307707)
chr7 (313-373)||(8880187-8880247)
chr7 (313-389)||(13434661-13434736)
chr7 (255-358)||(11484131-11484234)
chr7 (256-337)||(9192494-9192576)
chr7 (303-381)||(9264627-9264705)
chr7 (256-344)||(4307540-4307629)
chr7 (256-344)||(4312910-4312999)
chr7 (255-344)||(9194318-9194407)
chr7 (256-344)||(13434554-13434643)
chr7 (313-394)||(16897496-16897577)
chr7 (256-344)||(25181278-25181367)
chr7 (256-344)||(33612577-33612666)
chr7 (256-335)||(14942047-14942126)
chr7 (256-335)||(15369640-15369719)
chr7 (313-372)||(33612501-33612559)
chr7 (256-344)||(649095-649184)
chr7 (256-344)||(16463534-16463623)
chr7 (264-344)||(33609393-33609474)
chr7 (256-344)||(48355898-48355987)
chr7 (264-340)||(9264717-9264793)
chr7 (313-373)||(16463456-16463516)
chr7 (256-310)||(8880349-8880403)
chr7 (256-310)||(15707584-15707638)
chr7 (313-366)||(48355827-48355880)
chr7 (256-343)||(35964552-35964640)
chr7 (256-344)||(10204361-10204450)
[»] chr3 (22 HSPs)
chr3 (255-389)||(22038605-22038738)
chr3 (255-358)||(34053879-34053982)
chr3 (324-393)||(13601521-13601590)
chr3 (313-389)||(14495032-14495107)
chr3 (256-364)||(17022964-17023072)
chr3 (269-364)||(20225520-20225615)
chr3 (313-389)||(11398668-11398743)
chr3 (255-347)||(19567325-19567416)
chr3 (255-347)||(25766018-25766110)
chr3 (313-388)||(36075974-36076048)
chr3 (297-387)||(19567237-19567326)
chr3 (255-344)||(13601414-13601503)
chr3 (313-389)||(14661000-14661075)
chr3 (313-389)||(25054814-25054889)
chr3 (256-344)||(14495125-14495214)
chr3 (313-372)||(3245284-3245343)
chr3 (256-344)||(14661093-14661182)
chr3 (256-344)||(3250385-3250474)
chr3 (326-372)||(3250329-3250375)
chr3 (258-344)||(11398564-11398651)
chr3 (256-310)||(3245396-3245450)
chr3 (256-310)||(25054705-25054759)
[»] scaffold0264 (1 HSPs)
scaffold0264 (255-397)||(22629-22775)
[»] scaffold0012 (2 HSPs)
scaffold0012 (297-397)||(49652-49752)
scaffold0012 (255-344)||(49561-49650)
[»] chr5 (14 HSPs)
chr5 (299-389)||(20104161-20104251)
chr5 (264-373)||(2953786-2953895)
chr5 (255-344)||(20104255-20104344)
chr5 (313-389)||(15059232-15059307)
chr5 (313-388)||(23343759-23343833)
chr5 (303-373)||(20738119-20738189)
chr5 (324-389)||(20967558-20967622)
chr5 (297-389)||(21273407-21273498)
chr5 (255-358)||(16676806-16676909)
chr5 (255-344)||(25486009-25486098)
chr5 (256-344)||(20967440-20967529)
chr5 (256-344)||(15059125-15059214)
chr5 (256-344)||(23343851-23343940)
chr5 (255-336)||(24164708-24164789)
[»] chr4 (22 HSPs)
chr4 (256-373)||(38651866-38651983)
chr4 (297-393)||(10730915-10731011)
chr4 (297-393)||(10944684-10944780)
chr4 (313-389)||(24125437-24125512)
chr4 (313-387)||(45233914-45233987)
chr4 (263-347)||(11889309-11889393)
chr4 (313-373)||(11902856-11902916)
chr4 (313-389)||(15409830-15409905)
chr4 (313-389)||(31593671-31593746)
chr4 (313-371)||(45244498-45244556)
chr4 (313-374)||(21275031-21275092)
chr4 (256-344)||(13622011-13622099)
chr4 (326-389)||(13622109-13622171)
chr4 (313-371)||(3772439-3772497)
chr4 (256-344)||(11902934-11903023)
chr4 (313-358)||(11889249-11889294)
chr4 (256-344)||(15409723-15409812)
chr4 (256-344)||(45234005-45234094)
chr4 (256-335)||(24125538-24125618)
chr4 (255-310)||(5513962-5514017)
chr4 (255-332)||(10730825-10730902)
chr4 (255-332)||(10944594-10944671)
[»] chr1 (22 HSPs)
chr1 (296-393)||(8648624-8648721)
chr1 (264-395)||(39286843-39286973)
chr1 (255-393)||(30819301-30819438)
chr1 (297-393)||(20412019-20412115)
chr1 (313-389)||(44538041-44538116)
chr1 (255-344)||(20411928-20412017)
chr1 (256-360)||(16382344-16382448)
chr1 (313-389)||(17716529-17716604)
chr1 (313-388)||(52236088-52236162)
chr1 (256-360)||(25405274-25405378)
chr1 (313-388)||(16431345-16431419)
chr1 (266-344)||(8648545-8648623)
chr1 (313-389)||(48256089-48256164)
chr1 (313-372)||(26134756-26134815)
chr1 (264-393)||(43998192-43998306)
chr1 (256-344)||(48255982-48256071)
chr1 (256-344)||(16431238-16431327)
chr1 (256-344)||(17716422-17716511)
chr1 (256-344)||(44537934-44538023)
chr1 (264-344)||(52236180-52236261)
chr1 (256-310)||(26134868-26134922)
chr1 (256-320)||(20861115-20861179)
[»] scaffold0334 (1 HSPs)
scaffold0334 (264-364)||(6936-7036)
[»] scaffold0092 (2 HSPs)
scaffold0092 (297-385)||(19751-19839)
scaffold0092 (255-335)||(19850-19930)
[»] chr8 (11 HSPs)
chr8 (313-393)||(9978-10058)
chr8 (297-389)||(14351853-14351944)
chr8 (297-389)||(24967045-24967136)
chr8 (313-388)||(18161799-18161873)
chr8 (256-373)||(21319158-21319275)
chr8 (255-358)||(24341774-24341877)
chr8 (255-347)||(24966954-24967046)
chr8 (264-345)||(10060-10141)
chr8 (256-347)||(14351943-14352033)
chr8 (256-344)||(18161692-18161781)
chr8 (255-336)||(24221905-24221986)
[»] scaffold0168 (2 HSPs)
scaffold0168 (297-393)||(9086-9182)
scaffold0168 (264-335)||(9193-9264)
[»] chr2 (27 HSPs)
chr2 (255-347)||(23140287-23140379)
chr2 (255-347)||(23552077-23552169)
chr2 (313-389)||(24507110-24507185)
chr2 (298-374)||(44997996-44998072)
chr2 (313-387)||(25481177-25481250)
chr2 (313-387)||(25488783-25488856)
chr2 (266-358)||(15583502-15583594)
chr2 (297-389)||(23140197-23140288)
chr2 (297-389)||(23551987-23552078)
chr2 (255-344)||(29568801-29568890)
chr2 (298-358)||(29568738-29568798)
chr2 (255-338)||(25858962-25859045)
chr2 (319-373)||(32441634-32441688)
chr2 (319-389)||(16134407-16134476)
chr2 (255-345)||(44997904-44997994)
chr2 (313-373)||(20281829-20281889)
chr2 (256-358)||(25337421-25337523)
chr2 (319-372)||(19927200-19927253)
chr2 (256-344)||(19927087-19927176)
chr2 (263-344)||(20281730-20281811)
chr2 (256-344)||(32441712-32441801)
chr2 (354-390)||(25858871-25858907)
chr2 (256-337)||(24507003-24507085)
chr2 (256-344)||(11390846-11390935)
chr2 (256-344)||(11407507-11407596)
chr2 (256-344)||(16134500-16134589)
chr2 (255-335)||(24371795-24371875)
[»] scaffold0471 (2 HSPs)
scaffold0471 (313-389)||(10025-10100)
scaffold0471 (256-335)||(10126-10206)
[»] scaffold0371 (2 HSPs)
scaffold0371 (313-389)||(9306-9381)
scaffold0371 (256-344)||(9399-9488)
[»] scaffold0251 (2 HSPs)
scaffold0251 (313-389)||(19159-19234)
scaffold0251 (256-344)||(19252-19341)
[»] scaffold0713 (2 HSPs)
scaffold0713 (255-345)||(6950-7040)
scaffold0713 (356-395)||(6922-6961)
[»] scaffold0064 (2 HSPs)
scaffold0064 (313-387)||(48589-48662)
scaffold0064 (256-334)||(48482-48561)
[»] scaffold0058 (2 HSPs)
scaffold0058 (324-389)||(61654-61718)
scaffold0058 (257-344)||(61542-61630)
[»] scaffold0057 (2 HSPs)
scaffold0057 (313-373)||(20958-21018)
scaffold0057 (256-344)||(20851-20940)
[»] scaffold0031 (4 HSPs)
scaffold0031 (313-367)||(23063-23117)
scaffold0031 (313-374)||(100168-100229)
scaffold0031 (256-344)||(22956-23045)
scaffold0031 (256-344)||(100061-100150)
[»] scaffold0916 (2 HSPs)
scaffold0916 (313-389)||(3289-3364)
scaffold0916 (256-344)||(3182-3271)
[»] scaffold0360 (1 HSPs)
scaffold0360 (256-337)||(39-121)
[»] scaffold0096 (2 HSPs)
scaffold0096 (331-389)||(38167-38224)
scaffold0096 (313-367)||(38210-38264)
[»] scaffold0197 (2 HSPs)
scaffold0197 (313-373)||(9109-9169)
scaffold0197 (256-344)||(9187-9276)
[»] scaffold0447 (4 HSPs)
scaffold0447 (313-372)||(6217-6276)
scaffold0447 (313-372)||(10831-10890)
scaffold0447 (256-310)||(6132-6186)
scaffold0447 (256-310)||(10746-10800)
[»] scaffold0383 (2 HSPs)
scaffold0383 (313-372)||(8826-8885)
scaffold0383 (256-310)||(8741-8795)
[»] scaffold0213 (2 HSPs)
scaffold0213 (256-344)||(26667-26756)
scaffold0213 (256-343)||(21370-21456)
[»] scaffold0014 (1 HSPs)
scaffold0014 (255-336)||(167827-167908)


Alignment Details
Target: scaffold0098 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 255 - 393
Target Start/End: Complemental strand, 44647 - 44509
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||| || |||||||||| ||||||||| ||||||||||||||||||    
44647 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaattataaagatctcatgcaaaaatatattgtgcaaagaatttgaa 44548  T
355 gatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    |||||||| ||||||||||||||||||||||||||||||    
44547 gatcttgtgcaaaaatataacaagtggcgcgcccctttt 44509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 255 - 393
Target Start/End: Original strand, 26138390 - 26138528
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||| ||||||||  |||||||||| |||||||||||||||||||||| ||||||||    
26138390 gaaagatggagtcttggagcaaaagaaaggagaatttgagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaataatttgaa 26138489  T
355 gatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    |||||||| |||||||||||||||||||| |||||||||    
26138490 gatcttgtgcaaaaatataacaagtggcgggcccctttt 26138528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 255 - 393
Target Start/End: Original strand, 26017635 - 26017774
Alignment:
255 gaaagatggagtcttggagcaaaagaaata-agaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttga 353  Q
    |||||||||||||||||||||||| |||   |||||| ||||| |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||    
26017635 gaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaagaatttga 26017734  T
354 agatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
26017735 agatcttgtgcaaaaatataacaagtggcgcacccctttt 26017774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 255 - 393
Target Start/End: Original strand, 26157008 - 26157147
Alignment:
255 gaaagatggagtcttggagcaaaagaaata-agaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttga 353  Q
    |||||||||||||||||||||||| |||   |||||| ||||| |||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||    
26157008 gaaagatggagtcttggagcaaaaaaaaaggagaattggagctaattcgtgccaaaaatatgaagatctgatacaaaaatatcttgtgcaaagaatttga 26157107  T
354 agatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
26157108 agatcttgtgcaaaaatataacaagtggcgcacccctttt 26157147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 255 - 393
Target Start/End: Original strand, 25507320 - 25507458
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||||||||||||||| ||||||||  |||||| |||||||||| ||||||||  |||||||| ||||| |||||||| ||||||||||||||||||    
25507320 gaaagatggagtcttggagaaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatatcatagaaaaatatattgtgcaaagaatttgaa 25507419  T
355 gatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    |||||||| ||||||||||||||||||| |||| |||||    
25507420 gatcttgtgcaaaaatataacaagtggcacgcctctttt 25507458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 23575027 - 23574910
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| ||||||||||||| ||||||  |||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
23575027 aaagattgagtcttggagcagaagaaaggagaattggagctgattcatgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaagaatttgaag 23574928  T
356 atcttgtacaaaaatata 373  Q
    ||||||||| ||||||||    
23574927 atcttgtaccaaaatata 23574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 18234192 - 18234089
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||||||||||||||||||| ||||  |||||| |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||    
18234192 gaaagatggagtcttggagcaaaggaaaagagaattggagctgattcatgccaaaaatacgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 18234093  T
355 gatc 358  Q
    ||||    
18234092 gatc 18234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 296 - 397
Target Start/End: Original strand, 5398996 - 5399096
Alignment:
296 tgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgc 395  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
5398996 tgattcatgccaaaaatatgaagatctcatgcaaaaatatcttgtgcaaataatttgaagatcttgtacaaaaatataacaagtgg-gtgccccttttgc 5399094  T
396 cc 397  Q
    ||    
5399095 cc 5399096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 23517702 - 23517585
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| ||||||||||||||||||||  | |||| ||||||||||||| |||||  |||||||||| |||||||||||| |||||||||||||||||||    
23517702 aaagattgagtcttggagcaaaagaaaggataattggagctgattcatgtcaaaaatatgaagatcttatacaaaaatattttgtgcaaagaatttgaag 23517603  T
356 atcttgtacaaaaatata 373  Q
    ||||||||| ||||||||    
23517602 atcttgtaccaaaatata 23517585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 373
Target Start/End: Original strand, 17739358 - 17739467
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 363  Q
    |||||||||||||||||||  |||||| ||| | |||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
17739358 agtcttggagcaaaagaaaggagaattggagttaattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgta 17739457  T
364 caaaaatata 373  Q
    |  |||||||    
17739458 ccgaaatata 17739467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 256 - 389
Target Start/End: Complemental strand, 17284414 - 17284281
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaa-gatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    |||||| ||||||| ||||||||||||| |||||| |||||||||| ||| ||||  || || ||||| |||||||||||||| ||||||||||||||||    
17284414 aaagattgagtcttagagcaaaagaaatgagaattggagctgattcgtgcaaaaaatataaaagatcttatacaaaaatatctggtgcaaagaatttgaa 17284315  T
355 gatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    |||||||||||  ||||| | ||||||||||||||    
17284314 gatcttgtacattaatatca-aagtggcgcgcccc 17284281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 5949959 - 5949867
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaa-atatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
5949959 gattcatgccaaaaatatgaagatctcataccaaatatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 5949867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 297 - 387
Target Start/End: Original strand, 29253753 - 29253842
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 387  Q
    |||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
29253753 gattcatgtcaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatatga-aagtggcgcgcc 29253842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 25949102 - 25949177
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
25949102 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 25949177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 29253662 - 29253754
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||| ||||||||  ||||||||||| ||||||||||| | |||||||||    
29253662 gaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagatctcgtacaaaaatatatggtgcaaaga 29253754  T

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Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 12660836 - 12660733
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  || ||||||| ||| |||||||||||| ||||||||||||||    
12660836 gaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagatcttatataaaaatatcttgggcaaagaatttgaa 12660737  T
355 gatc 358  Q
    ||||    
12660736 gatc 12660733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 358
Target Start/End: Complemental strand, 18399998 - 18399903
Alignment:
263 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 358  Q
    ||||||||||| ||||||||  | |||||||||||||||  |||||||  |||||||||| ||||||||||||||||||||||||| ||| |||||    
18399998 gagtcttggagaaaaagaaaggataattagagctgattccggccaaaaatatgaagatctaatacaaaaatatcttgtgcaaagaaattgtagatc 18399903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 25963702 - 25963774
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 386  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||    
25963702 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatat-acaagaggcgcgc 25963774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 386
Target Start/End: Original strand, 25968349 - 25968421
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 386  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||    
25968349 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatattgtacaaatatat-acaagaggcgcgc 25968421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 5950050 - 5949958
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    |||||||||||||||| |||||||||||  |||||| ||||| |||||||||||||  || |||||||||| |||||| || |||||||||||    
5950050 gaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaaaatattgtgcaaaga 5949958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 32543037 - 32543097
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
32543037 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 32543097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 5398905 - 5398995
Alignment:
255 gaaagatggagtctt-ggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||| |||||||||||||  |||| |   ||| |||||||||||||  ||||||||||||||||||||||||||||||||    
5398905 gaaagatggagtctttggagcaaaagaaaggagaaatgttgcttattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 5398995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 13217664 - 13217570
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 358  Q
    |||||||||||||||||||  ||| ||| ||||||||  ||||||||  |||||||||| |||||||||||||||||| ||| | ||||||||||    
13217664 agtcttggagcaaaagaaaggagatttacagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgtaaaaagtttgaagatc 13217570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 25948995 - 25949084
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
25948995 aaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25949084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 25963595 - 25963684
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
25963595 aaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25963684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 25968242 - 25968331
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
25968242 aaagattgagtcttagagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctagtgcaa 25968331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 12658344 - 12658260
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttg 339  Q
    ||||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  || ||||||| ||| ||||||||||||    
12658344 gaaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatataaagatcttatataaaaatatcttg 12658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 20222194 - 20222249
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    ||||||| ||||||||||||||||||||| ||| || ||||||||| | |||||||    
20222194 gaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaa 20222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 22116178 - 22116233
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    ||||||| ||||||||||||||||||||| ||| || ||||||||| | |||||||    
22116178 gaaagattgagtcttggagcaaaagaaatgagatttggagctgattgaggccaaaa 22116233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 301
Target Start/End: Original strand, 3923381 - 3923426
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattc 301  Q
    |||||| ||||||||||||||||||||| ||| || ||||||||||    
3923381 aaagattgagtcttggagcaaaagaaatgagatttggagctgattc 3923426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 32542938 - 32543019
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
32542938 agtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 32543019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 320
Target Start/End: Original strand, 20464003 - 20464067
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagat 320  Q
    |||||| ||||||||||||||||||||  ||| || ||||||||||  |||||||  ||||||||    
20464003 aaagattgagtcttggagcaaaagaaaggagatttggagctgattcgggccaaaaatatgaagat 20464067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 6e-44; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 255 - 397
Target Start/End: Complemental strand, 6257881 - 6257739
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    |||||||||| ||||| ||||| |||||  ||| || |||||||||||||  ||||  |||||||||| |||||||||||||||||||||||||||||||    
6257881 gaaagatggaatcttgcagcaatagaaaggagacttggagctgattcatgtaaaaaatatgaagatctaatacaaaaatatcttgtgcaaagaatttgaa 6257782  T
355 gatcttgtacaaaaatataacaagtggcgcgccccttttgccc 397  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
6257781 gatcttgtacaaaaatataacaagtggcgcaccccttttgccc 6257739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 21005785 - 21005695
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 387  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
21005785 gattcatgcaaaaattatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatctcgtacaaaaatataacaagtggcgcgcc 21005695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 6258116 - 6258003
Alignment:
20 cggataaacttcaattattacatatgatcgtatctaataagaatgataatgtatggtgcggttgttcttggtgtttgtgatggcggggtaagtattatcg 119  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||  ||||||||||||| |||     
6258116 cggataaactttaattattacatatgatcgtatctgataagaatgataatgtctggtgcggttggtctgggtgtttgtgacagcggggtaagtatgatca 6258017  T
120 gtcaataatgagtc 133  Q
    ||||||||||||||    
6258016 gtcaataatgagtc 6258003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 297 - 393
Target Start/End: Complemental strand, 9194316 - 9194220
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
9194316 gattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgtaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcacccctttt 9194220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 1462334 - 1462426
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    |||||||| |||||  ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
1462334 gattcatgtcaaaaatatgaagatcccatacaaaaaaatcttgtgcaaagaattagaagatcttgtacaaaaatataacaagtggcgcgcccc 1462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 1462243 - 1462332
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
1462243 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaagtatgaagatctcatacaaaaatatcttgtgcaa 1462332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 21005876 - 21005787
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
21005876 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 21005787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 9004395 - 9004486
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||||||  ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
9004395 gattcatgccaaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 9004486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 256 - 358
Target Start/End: Complemental strand, 4461114 - 4461012
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| | ||||||||||||||||||  |||||| |||||||| | ||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
4461114 aaagattgcgtcttggagcaaaagaaaggagaattggagctgatccgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaagaatttgaag 4461015  T
356 atc 358  Q
    |||    
4461014 atc 4461012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 48713238 - 48713335
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaa-tatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||||||||  |||||||||||||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
48713238 gattcatgccaaaaatatgaagatctcatacaaaaaatatattgttcaaagaatttgaagatcttgtgcaaaaatataacaagtgccgcacccctttt 48713335  T

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Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 19515778 - 19515686
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||| ||||||||  ||||||||||||||||||||||||| |||||||||    
19515778 gaaagatggagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatatgaagatctcatacaaaaatatctggtgcaaaga 19515686  T

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Target: chr7; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 48713147 - 48713236
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||  || |||||||||| ||||||||| ||||||||    
48713147 gaaagatggagtcttggagcaaaagaaaagagaattagagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaa 48713236  T

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Target: chr7; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 10204468 - 10204543
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
10204468 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 10204543  T

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Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 14942020 - 14941945
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
14942020 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14941945  T

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Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 15369613 - 15369538
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
15369613 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 15369538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 313 - 394
Target Start/End: Original strand, 33609492 - 33609573
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttg 394  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||  ||||| |||||||||| ||||    
33609492 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatacgacaagaggcgcgccccctttg 33609573  T

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Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 15707531 - 15707457
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 388  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
15707531 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccc 15707457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 25181260 - 25181186
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 388  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||    
25181260 atgaatatctcatacaaaaatatcttgtgaaaagaatttgaagatcttgtacaataatataa-aagtggtgcgccc 25181186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 297 - 386
Target Start/End: Complemental strand, 19515687 - 19515599
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgc 386  Q
    |||||||| |||||  ||||||||||||||| |||||||||| |||||||||||||||||||| |||||| ||||| | |||||||||||    
19515687 gattcatgtcaaaaatatgaagatctcataccaaaatatcttatgcaaagaatttgaagatctcgtacaataatatga-aagtggcgcgc 19515599  T

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Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 4313017 - 4313077
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
4313017 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 4313077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 9004304 - 9004396
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    ||||||| ||||||||| |||||||||| ||||||| ||||| ||||||| |||||  || |||||||||| ||||||||| |||||||||||    
9004304 gaaagattgagtcttggggcaaaagaaagaagaattggagcttattcatggcaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 9004396  T

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Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 35964533 - 35964459
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 388  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| |||| ||||| |||||||||    
35964533 atgaatatctcatacaaaaatatcctgtgcaaagaatttaaagatcttgtacaaatatat-acaagaggcgcgccc 35964459  T

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Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 372
Target Start/End: Complemental strand, 649076 - 649018
Alignment:
314 tgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
649076 tgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaacatat 649018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 4307647 - 4307707
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
4307647 atgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatata 4307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 8880247 - 8880187
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
8880247 atgaatatctcatacaaaaatatcctgtgcaaaaaatttgaagatcttgtacaaacatata 8880187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 13434661 - 13434736
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||   ||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
13434661 atgaatatctcatacaaaaatattccgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 13434736  T

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Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 11484234 - 11484131
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||| ||||||  ||||||||||||  ||| || ||||||||| |||||||||  |||||||||| |||||||| ||||||||||||| | | ||||    
11484234 gaaagattgagtctcagagcaaaagaaaggagatttggagctgatttatgccaaaagtatgaagatcttatacaaaagtatcttgtgcaaaaagtgtgaa 11484135  T
355 gatc 358  Q
    ||||    
11484134 gatc 11484131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 9192494 - 9192576
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatct 337  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||||    
9192494 aaagattgagtcttggagcaaaagaaagaagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatct 9192576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 381
Target Start/End: Complemental strand, 9264705 - 9264627
Alignment:
303 tgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtgg 381  Q
    ||||||||  |||||||||| |  ||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||    
9264705 tgccaaaaatatgaagatctaaagcaaaaatatattgtgcgaagaatttgaatatcttgtgcaaaaatataacaagtgg 9264627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 4307540 - 4307629
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| |||||||||| |||||||||  ||||||||||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
4307540 aaagattgagtcttggaacaaaagaaaggagaattagagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 4307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 4312910 - 4312999
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  | |||| |||||||||| ||||||||  ||| |||||||||||||||| ||||| ||||||    
4312910 aaagattgagtcttggagcaaaagaaaggaaaattggagctgattcgtgccaaaaatatgaaagatctcatacaaaattatctggtgcaa 4312999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 9194407 - 9194318
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||||||||||||||||  ||||||  |||| |||||||||||||  || ||||| |||| ||||||||| || |||||    
9194407 gaaagatggagtcttggagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagatttcatgcaaaaatatattctgcaa 9194318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 13434554 - 13434643
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| |||||||||||||||||||| ||||||| |||| ||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
13434554 aaagattgagtcttggagcaaaagaaagaagaatttgagcggattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 13434643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 394
Target Start/End: Complemental strand, 16897577 - 16897496
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttg 394  Q
    ||||| ||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||  ||||| |||| ||||| ||||    
16897577 atgaatatctcatacaaaaatatattgtgcaaggaatttgaaaatcttgtacaataatacgacaagaggcgtgccccctttg 16897496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 25181367 - 25181278
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| |||| |||||||||||||||| |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
25181367 aaagattgagttttggagcaaaagaaatgagaattggagctgattcgtgccaaaactataaaagatcttatacaaaaatatctggtgcaa 25181278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 33612666 - 33612577
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||| |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
33612666 aaagattgagtcttggagcaaaagaaatgagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 33612577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 14942126 - 14942047
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 335  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| ||||||||||||    
14942126 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaagatcttatacaaaaatat 14942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 15369719 - 15369640
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 335  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| ||||||||||||    
15369719 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaagatcttatacaaaaatat 15369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 33612559 - 33612501
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
33612559 atgaatatctcatacaaaa-tatcatgtgcaaagaatttgaagatcttgtacaaatatat 33612501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 649184 - 649095
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  |||||||  ||||||||||||| ||||||    
649184 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttgtacaaaaatatctggtgcaa 649095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 16463623 - 16463534
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
16463623 aaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 16463534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 344
Target Start/End: Original strand, 33609393 - 33609474
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||||||||||||||||  |||||| |||||||||||||||||||  ||  ||||||| | |||||||||||| ||||||    
33609393 agtcttggagcaaaagaaaggagaatttgagctgattcatgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 33609474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 48355987 - 48355898
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  | |||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
48355987 aaagattgagtcttggagcaaaagaaaggataattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 48355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 340
Target Start/End: Complemental strand, 9264793 - 9264717
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgt 340  Q
    |||||||||||||||||||  |||||| || || |||||||||||||  ||||||||||||| ||||| ||| ||||    
9264793 agtcttggagcaaaagaaaggagaattggaacttattcatgccaaaaatatgaagatctcatgcaaaagtatattgt 9264717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 16463516 - 16463456
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| ||||||| |||||||||| | ||||||||||||||||||||| |||||| |||||    
16463516 atgaatatctcatgcaaaaatatcctatgcaaagaatttgaagatcttctacaaatatata 16463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 8880403 - 8880349
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
8880403 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtgccaaaa 8880349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 15707638 - 15707584
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
15707638 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 15707584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 366
Target Start/End: Complemental strand, 48355880 - 48355827
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaa 366  Q
    ||||| |||||||||||||||||  | ||||||| |||||||||||||||||||    
48355880 atgaatatctcatacaaaaatattctatgcaaaggatttgaagatcttgtacaa 48355827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 35964640 - 35964552
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgca 343  Q
    |||||| ||||||||||||||||||||  |||| | |||||||||  ||||||||  ||  ||||||| |||||||||||||| |||||    
35964640 aaagattgagtcttggagcaaaagaaaggagaactggagctgatttgtgccaaaaatataaaagatcttatacaaaaatatctggtgca 35964552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 10204361 - 10204450
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| ||| ||| || ||||||||  ||  ||||||| |||||||||||| | ||||||    
10204361 aaagattgagtcttggagcaaaagaaaggagaattggagatgaatcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 10204450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 6e-44; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 255 - 389
Target Start/End: Original strand, 22038605 - 22038738
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||||||||||||||||||||||||  |||||| |||||  ||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |    
22038605 gaaagatggagtcttggagcaaaagaaaggagaattggagcttgttcatgccaaaaatatgaa-atctcatacaaaaatatcttgtgcaaagaatttgga 22038703  T
355 gatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    |||||||||||||||||||||||||| ||||||||    
22038704 gatcttgtacaaaaatataacaagtgacgcgcccc 22038738  T

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Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 255 - 358
Target Start/End: Complemental strand, 34053982 - 34053879
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||||||||||||||| ||| ||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
34053982 gaaagatggagtcttggagaaaaggaaatgagaattggagctgattcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 34053883  T
355 gatc 358  Q
    ||||    
34053882 gatc 34053879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 324 - 393
Target Start/End: Original strand, 13601521 - 13601590
Alignment:
324 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
13601521 atacaaaaatatcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgcccctttt 13601590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 14495107 - 14495032
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
14495107 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcgcgcccc 14495032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 256 - 364
Target Start/End: Original strand, 17022964 - 17023072
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| |||| || ||||||||||||| |||||| |||||||||  ||||||||  | |||||||||| ||||||||||||||||||||||||| ||||    
17022964 aaagattgagtattagagcaaaagaaatgagaattggagctgatttgtgccaaaaataagaagatctcacacaaaaatatcttgtgcaaagaattagaag 17023063  T
356 atcttgtac 364  Q
    |||||||||    
17023064 atcttgtac 17023072  T

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Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 269 - 364
Target Start/End: Complemental strand, 20225615 - 20225520
Alignment:
269 tggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtac 364  Q
    ||||||||||||||  |||||| |||||||||| ||||||||  |||||||||||| |||||||||||||||  |||||||| |||||||||||||    
20225615 tggagcaaaagaaaggagaattggagctgattcttgccaaaaatatgaagatctcacacaaaaatatcttgtataaagaattagaagatcttgtac 20225520  T

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Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 11398668 - 11398743
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
11398668 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 11398743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 19567416 - 19567325
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
19567416 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaa-aataaagatctcatgcaaaaatatattgtgcaaaga 19567325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 25766110 - 25766018
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    |||||||||||||||| |||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
25766110 gaaagatggagtcttgaagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 25766018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 36075974 - 36076048
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 388  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
36075974 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 36076048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 297 - 387
Target Start/End: Complemental strand, 19567326 - 19567237
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 387  Q
    ||||||||||||||  || ||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||    
19567326 gattcatgccaaaaatattaagatctgataccaaaatatcttgtgcaaagaattcgaagatcttgtacaataatataa-aagtggtgcgcc 19567237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 13601414 - 13601503
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || ||||||| || ||||||||| ||||||||    
13601414 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatataaagatcttatgcaaaaatatattgtgcaa 13601503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 14661075 - 14661000
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||| ||||||||||||||    
14661075 atgaatatctcatacaaaaatatcatgtacgaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14661000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 25054814 - 25054889
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
25054814 atgaatatctcatacaaaaatattatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 25054889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 14495214 - 14495125
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||||||||||||  ||  ||||||| |||||||||||||| ||||||    
14495214 aaagattgagtcttggagcaaaagaaacgagaattggagctgattcatgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 14495125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 3245343 - 3245284
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
3245343 atgaatatctcatacaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3245284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 14661182 - 14661093
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
14661182 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 14661093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 3250474 - 3250385
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
3250474 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 3250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 372
Target Start/End: Complemental strand, 3250375 - 3250329
Alignment:
326 acaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||    
3250375 acaaaaatatcatatgcaaagaatttgaagatcttgtacaaatatat 3250329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 344
Target Start/End: Original strand, 11398564 - 11398651
Alignment:
258 agatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| ||||||||||| || ||||||    
11398564 agattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaaatataaaagatcttatacaaaaatacctggtgcaa 11398651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 3245450 - 3245396
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    |||||| ||||||||||| ||||||||  |||||| |||||||||| ||||||||    
3245450 aaagattgagtcttggagtaaaagaaaggagaattggagctgattcgtgccaaaa 3245396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 25054705 - 25054759
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||    
25054705 aaagattgagtcttggagcaaaagaaaggagaattggagctaattcgtgccaaaa 25054759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 255 - 397
Target Start/End: Complemental strand, 22775 - 22629
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcata----caaaaatatcttgtgcaaagaatt 350  Q
    ||||||||||||||| ||||||||||||  ||| || ||||||||||||| |||||  ||||||||||||||    ||||||||||||||||||||||||    
22775 gaaagatggagtctttgagcaaaagaaaggagatttggagctgattcatgtcaaaaatatgaagatctcatatatacaaaaatatcttgtgcaaagaatt 22676  T
351 tgaagatcttgtacaaaaatataacaagtggcgcgccccttttgccc 397  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||    
22675 tgaagatattgtacaaaaatataacaagtgacgcgcccattttgccc 22629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 49652 - 49752
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccccttttgcc 396  Q
    |||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
49652 gattcatgtcaaaaatatgaagatctcatacgaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccctttttgcc 49751  T
397 c 397  Q
    |    
49752 c 49752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 49561 - 49650
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||||| ||||||||| ||||||||    
49561 gaaagatggagtcttggagcaaaagaaataagaattggagcttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaa 49650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 8e-37; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 299 - 389
Target Start/End: Complemental strand, 20104251 - 20104161
Alignment:
299 ttcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
20104251 ttcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttatacaaaaatataacaagtggcgcgcccc 20104161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 2953895 - 2953786
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 363  Q
    ||||||||| |||||||||  |||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
2953895 agtcttggaacaaaagaaaggagaattggagctgattcgtgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgta 2953796  T
364 caaaaatata 373  Q
    | | ||||||    
2953795 ccagaatata 2953786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 20104344 - 20104255
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||||||||||||||||  ||||||| |||| ||| |||||||||  ||||||||||||||||||||||||||||||||    
20104344 gaaagatggagtcttggagcaaaagaaaggagaattatagcttattgatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaa 20104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 15059232 - 15059307
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
15059232 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgcccc 15059307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 23343833 - 23343759
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 388  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
23343833 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgccc 23343759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 303 - 373
Target Start/End: Original strand, 20738119 - 20738189
Alignment:
303 tgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||||||  || ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
20738119 tgccaaaaatataaagatctcatacaaaaatatcttgtgcaaagaaattgaagatcttgtacaagaatata 20738189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 20967558 - 20967622
Alignment:
324 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||    
20967558 atacaaaaatatcttatgcaaagaatttgaagatcttgtacaaaaacataa-aagtggcgcgcccc 20967622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 21273407 - 21273498
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||||||  ||||||||||||||| || |||| ||||| |||||||||||| |||||| |||| ||||||| ||||||||||||||    
21273407 gattcatgccaaaaatatgaagatctcataccaatatatgttgtgtaaagaatttgaatatcttgcacaataatataa-aagtggcgcgcccc 21273498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 16676806 - 16676909
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||| ||||||||||||||||||||   || ||  ||||||||  ||||||||  |||||||||| |||||||||||||||||||||| | ||||||    
16676806 gaaagattgagtcttggagcaaaagaaaagggatttgaagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaaaagtttgaa 16676905  T
355 gatc 358  Q
    ||||    
16676906 gatc 16676909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 25486098 - 25486009
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||| ||||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||||| ||||||||    
25486098 gaaagatggagtctttgagcaaaagaaaggagaattggagcttattcataccaaaaatataaagatctcatgcaaaaatatattgtgcaa 25486009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 20967440 - 20967529
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
20967440 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 20967529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 15059125 - 15059214
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| || |||||  ||  ||||||| | |||||||||||| ||||||    
15059125 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgtcaaaaatataaaagatcttacacaaaaatatctggtgcaa 15059214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 23343940 - 23343851
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||| | ||||||||  ||  ||||| | | |||||||||||||||||||    
23343940 aaagattgagtcttggagcaaaagaaaggagaattggagctgatgcgtgccaaaaatataaaagattttacacaaaaatatcttgtgcaa 23343851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 24164708 - 24164789
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 336  Q
    ||||||| ||||||||||||||||||||  ||| || ||| ||||| | |||||||  ||||||||||  | ||||||||||    
24164708 gaaagattgagtcttggagcaaaagaaaggagatttggagatgattgaagccaaaaatatgaagatcttgtgcaaaaatatc 24164789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 8e-34; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 256 - 373
Target Start/End: Original strand, 38651866 - 38651983
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||    
38651866 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcatgccaaaaatattaagatcttatacaaaaatatcttgtgcaaagaattggaag 38651965  T
356 atcttgtacaaaaatata 373  Q
    ||||||| | ||||||||    
38651966 atcttgtgccaaaatata 38651983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 10730915 - 10731011
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
10730915 gattcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgcccctttt 10731011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 10944684 - 10944780
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
10944684 gattcatgccaaaaatatgaagatctcatacaaaaatatcttatgcaaagaatttaaagatcttgtgcaaaaatataacaagtggcgtgcccctttt 10944780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 24125512 - 24125437
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
24125512 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24125437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 387
Target Start/End: Complemental strand, 45233987 - 45233914
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 387  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||    
45233987 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcacgcc 45233914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 11889393 - 11889309
Alignment:
263 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    ||||||||||||||||||||  |||||| ||||| |||||||||||||  |||||||||||||| |||||||| || ||||||||    
11889393 gagtcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatataaaaatatattatgcaaaga 11889309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 11902916 - 11902856
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
11902916 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtaccaatatata 11902856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 15409830 - 15409905
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||    
15409830 atgaatatctcatacaaaaatatcatgtgcaaagagtttgaagatcttgtacaataatataa-aagtggcacgcccc 15409905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 31593671 - 31593746
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
31593671 atgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 31593746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 45244556 - 45244498
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaata 371  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
45244556 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataata 45244498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 21275031 - 21275092
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 374  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
21275031 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgttcaataatataa 21275092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 13622011 - 13622099
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||||||    ||||||| |||||||||||||| ||||||    
13622011 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatgtaaaagatcttatacaaaaatatctggtgcaa 13622099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 13622109 - 13622171
Alignment:
326 acaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
13622109 acaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 13622171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 371
Target Start/End: Complemental strand, 3772497 - 3772439
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaata 371  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
3772497 atgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataata 3772439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 11903023 - 11902934
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
11903023 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 11902934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 358
Target Start/End: Complemental strand, 11889294 - 11889249
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 358  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||    
11889294 atgaagatctcataccaaaatatcttctgcaaagaatttgaagatc 11889249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 15409723 - 15409812
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
15409723 aaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 15409812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 45234094 - 45234005
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| |||||||||||||||| |||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
45234094 aaagattgagtcttggagcaaaaaaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 45234005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 24125618 - 24125538
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatat 335  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||    
24125618 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatat 24125538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 5514017 - 5513962
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    ||||||| ||||||||||||||||||||| ||| |||||||||||||  |||||||    
5514017 gaaagattgagtcttggagcaaaagaaatgagatttagagctgattcgggccaaaa 5513962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 10730825 - 10730902
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaa 332  Q
    |||||||||||| |||| ||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||    
10730825 gaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagatctcatgcaaaaa 10730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 10944594 - 10944671
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaa 332  Q
    |||||||||||| |||| ||||||||||  |||||| ||||| |||||| ||||||  || |||||||||| ||||||    
10944594 gaaagatggagtgttggtgcaaaagaaaggagaattggagcttattcatcccaaaaatataaagatctcatgcaaaaa 10944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 296 - 393
Target Start/End: Original strand, 8648624 - 8648721
Alignment:
296 tgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    |||||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
8648624 tgattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgaccctttt 8648721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 395
Target Start/End: Complemental strand, 39286973 - 39286843
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 363  Q
    |||||||||||||||||||  ||| || ||||| |||||||||||||  ||||||||||||| |||||| || |||||||||||||||| |||||||||     
39286973 agtcttggagcaaaagaaaggagatttggagcttattcatgccaaaaatatgaagatctcatgcaaaaa-atattgtgcaaagaatttggagatcttgtg 39286875  T
364 caaaaatataacaagtggcgcgccccttttgc 395  Q
    |||||||||||||||||||||  |||||||||    
39286874 caaaaatataacaagtggcgcaacccttttgc 39286843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 255 - 393
Target Start/End: Complemental strand, 30819438 - 30819301
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||| ||||||| ||||||||||||| |||||| |||||||||||||||||||  |||||||||| |||||||||||| |||||||||||| |||||    
30819438 gaaagattgagtcttagagcaaaagaaatgagaattggagctgattcatgccaaaaatatgaagatcttatacaaaaatatattgtgcaaagaaattgaa 30819339  T
355 gatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    |||| |  || ||||||||| |  |||||||||||||||    
30819338 gatccttcaccaaaatataa-agatggcgcgcccctttt 30819301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 393
Target Start/End: Original strand, 20412019 - 20412115
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||| ||||  ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||    
20412019 gattcatgcaaaaaatatgaagatctcatacaaaaatatctggtgcaaagaaattgaagatcttgtgcaaaaatataacaagtggtgcgctcctttt 20412115  T

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Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 44538041 - 44538116
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
44538041 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 44538116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 20411928 - 20412017
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||  || |||||||||| ||||||||| ||||||||    
20411928 gaaagatggagtcttggagcaaaagaaacgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaa 20412017  T

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Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 256 - 360
Target Start/End: Complemental strand, 16382448 - 16382344
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| ||||||||||||||||||||| ||| || |||||||||  ||||||||  ||||||||||  | ||||||||||||||||||| | |||||||    
16382448 aaagattgagtcttggagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagatcttgtgcaaaaatatcttgtgcaaaaagtttgaag 16382349  T
356 atctt 360  Q
    |||||    
16382348 atctt 16382344  T

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Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 17716529 - 17716604
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
17716529 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 17716604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 388
Target Start/End: Complemental strand, 52236162 - 52236088
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 388  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
52236162 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 52236088  T

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Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 256 - 360
Target Start/End: Complemental strand, 25405378 - 25405274
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| ||||||||||||||||||||  ||| || |||||||||  ||||||||  |||||||||| ||||| |||||||||||||||| | || ||||    
25405378 aaagattgagtcttggagcaaaagaaaggagatttggagctgatttgtgccaaaaatatgaagatcttatacagaaatatcttgtgcaaaaagttagaag 25405279  T
356 atctt 360  Q
    |||||    
25405278 atctt 25405274  T

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Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 16431345 - 16431419
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 388  Q
    ||||| || ||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||    
16431345 atgaatatttcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgccc 16431419  T

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Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 266 - 344
Target Start/End: Original strand, 8648545 - 8648623
Alignment:
266 tcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||| ||||||||| ||||||||    
8648545 tcttggagcaaaagaaaggagaattggagcttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaa 8648623  T

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Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 48256089 - 48256164
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |||  ||||| ||||||||||    
48256089 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagaacttgtacaaatata-cacaagaggcgcgcccc 48256164  T

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Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 26134815 - 26134756
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    ||||| |||||||||||||||||  |||||||||||||||||||||||||||||| ||||    
26134815 atgaatatctcatacaaaaatattctgtgcaaagaatttgaagatcttgtacaaatatat 26134756  T

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Target: chr1; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 393
Target Start/End: Original strand, 43998192 - 43998306
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 363  Q
    |||||||||||||||||||  |||||||||||| || ||||||||||  |||||||||||||               ||||||||||||||||||||||     
43998192 agtcttggagcaaaagaaaggagaattagagcttatccatgccaaaagtatgaagatctcat---------------gcaaagaatttgaagatcttgtg 43998276  T
364 caaaaatataacaagtggcgcgcccctttt 393  Q
    |||||||||| ||||||||||| |||||||    
43998277 caaaaatatatcaagtggcgcgaccctttt 43998306  T

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Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 48255982 - 48256071
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||||||| |||||| ||| ||||  ||  ||||||| |||||||||||||| ||||||    
48255982 aaagattgagtcttggagcaaaagaaaggagaattagagttgattcgtgcaaaaaatataaaagatcttatacaaaaatatctggtgcaa 48256071  T

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Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 16431238 - 16431327
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| | ||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
16431238 aaagattgggtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 16431327  T

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Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 17716422 - 17716511
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||   ||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
17716422 aaagattgagtcttggagcaaaagaaaggcgaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 17716511  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 44537934 - 44538023
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| ||| ||| || ||||||||  ||  ||||||| |||||||||||||| ||||||    
44537934 aaagattgagtcttggagcaaaagaaaggagaattggagttgaatcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 44538023  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 52236261 - 52236180
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
52236261 agtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatttggtgcaa 52236180  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 26134922 - 26134868
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||    
26134922 aaagattgagtcttagagcaaaagaaaggagaatttgagctgattcgtgccaaaa 26134868  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 256 - 320
Target Start/End: Complemental strand, 20861179 - 20861115
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagat 320  Q
    |||||| ||||||||||||||||||||| | | || ||||||||||  |||||||  ||||||||    
20861179 aaagattgagtcttggagcaaaagaaatgatattttgagctgattcgggccaaaaatatgaagat 20861115  T

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Target: scaffold0334 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 264 - 364
Target Start/End: Original strand, 6936 - 7036
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgta 363  Q
    |||||||||||||||||||   ||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
6936 agtcttggagcaaaagaaaggggaattggagctgattcatgccaaaaatatgaagatctcatataaaaatatcttgtgcaaagaattagaagatcttgta 7035  T
364 c 364  Q
    |    
7036 c 7036  T

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Target: scaffold0092 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 19839 - 19751
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcg 385  Q
    ||||| ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
19839 gattcgtgccaaaaatatgaagatctcatacaaaaatttcttgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcg 19751  T

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Target: scaffold0092; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 19930 - 19850
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 335  Q
    ||||||||||||||||||| ||||||||  |||||| ||||| |||||||||||||  || |||||||||| |||||||||    
19930 gaaagatggagtcttggagaaaaagaaaggagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatat 19850  T

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Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 393
Target Start/End: Complemental strand, 10058 - 9978
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
10058 atgaagatctcatgcaaaaatatattgtgcaaagaatttgaagatcttgtgcaaaaatataacaagtggcgcgaccctttt 9978  T

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Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 14351944 - 14351853
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    |||||| |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
14351944 gattcaagccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 14351853  T

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Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 389
Target Start/End: Original strand, 24967045 - 24967136
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||| ||||  |||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
24967045 gattcatgcaaaaaatatgaagatatcatactaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24967136  T

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Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 18161799 - 18161873
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgccc 388  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
18161799 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgccc 18161873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 256 - 373
Target Start/End: Original strand, 21319158 - 21319275
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| || ||||||||||||| |||  ||||||  ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||| || |||    
21319158 aaagattgaatcttggagcaaaaaaaaggagaattgaagctgattcgtgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaaattaaag 21319257  T
356 atcttgtacaaaaatata 373  Q
    || |||||| | ||||||    
21319258 atgttgtactagaatata 21319275  T

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Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 358
Target Start/End: Original strand, 24341774 - 24341877
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaa 354  Q
    ||||||| ||||||| ||||||||||||| ||| || |||||||||  ||||||||  |||||||||| |||||||||||||||||||||| | ||||||    
24341774 gaaagattgagtcttagagcaaaagaaatgagatttggagctgatttgtgccaaaaatatgaagatcttatacaaaaatatcttgtgcaaaaagtttgaa 24341873  T
355 gatc 358  Q
    ||||    
24341874 gatc 24341877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 24966954 - 24967046
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    ||||||||||||||||||||||||||||  |||||| ||||| |||||| | ||||  || |||||||||| ||||||||| || ||||||||    
24966954 gaaagatggagtcttggagcaaaagaaaggagaattggagcttattcatacaaaaaatataaagatctcatgcaaaaatatattttgcaaaga 24967046  T

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Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 10141 - 10060
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 345  Q
    |||||||||||||||||||  | |||| ||| | |||||||||||||  ||||||||||||| ||||||||| |||||||||    
10141 agtcttggagcaaaagaaaggaaaattggagtttattcatgccaaaaatatgaagatctcatgcaaaaatatattgtgcaaa 10060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 347
Target Start/End: Complemental strand, 14352033 - 14351943
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    |||||| |||||||||||||||||||   |||||| ||||| |||||||||||||| || ||||||| || |||||| || |||||||||||    
14352033 aaagattgagtcttggagcaaaagaagggagaattggagcttattcatgccaaaattataaagatcttatgcaaaaa-atattgtgcaaaga 14351943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 18161692 - 18161781
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaa-aatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| |||||| |||    ||||||| |||||||||||||| ||||||    
18161692 aaagattgagtcttggagcaaaagaaaggagaatttgagctgattcgtgccaacaatataaaagatcttatacaaaaatatctggtgcaa 18161781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 336
Target Start/End: Complemental strand, 24221986 - 24221905
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 336  Q
    ||||||| ||||||||||||||||||||  ||| |||||||| ||| | |||||||  ||||||||||  | ||||||||||    
24221986 gaaagatcgagtcttggagcaaaagaaaggagatttagagctaattgaggccaaaaatatgaagatcttgtgcaaaaatatc 24221905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 393
Target Start/End: Complemental strand, 9182 - 9086
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccctttt 393  Q
    ||||||||||||||  ||||||||||||| ||||||| | |||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||    
9182 gattcatgccaaaaatatgaagatctcatgcaaaaatctattgtgcaaagaatttgaacatcttgtcaaaaaatataacaagtggcgcgaccctttt 9086  T

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Target: scaffold0168; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 9264 - 9193
Alignment:
264 agtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 335  Q
    |||||||||||||||||||  |||||| ||||| |||||||||| ||  ||||||||||||| |||||||||    
9264 agtcttggagcaaaagaaaggagaattggagcttattcatgccataaatatgaagatctcatgcaaaaatat 9193  T

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Target: chr2 (Bit Score: 61; Significance: 5e-26; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 23140379 - 23140287
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
23140379 gaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 23140287  T

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Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 23552169 - 23552077
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaaga 347  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||  || |||||||||| ||||||||| |||||||||||    
23552169 gaaagatggagtcttggagcaaaagaaatgagaattggagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaaga 23552077  T

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Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 24507110 - 24507185
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
24507110 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 24507185  T

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Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 298 - 374
Target Start/End: Original strand, 44997996 - 44998072
Alignment:
298 attcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 374  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
44997996 attcatgccaaaaatatgaagatctcataccaaaatatcttgtgcaaagaatttgaagatcttgtacaataatataa 44998072  T

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Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 25481177 - 25481250
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 387  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
25481177 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcc 25481250  T

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Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 25488783 - 25488856
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 387  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
25488783 atgaatatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggtgcgcc 25488856  T

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Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 266 - 358
Target Start/End: Original strand, 15583502 - 15583594
Alignment:
266 tcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 358  Q
    ||||||||||||| |||  |||||| |||||||||| ||||||||  |||||||||| |||||||||||||||| ||||||||||||||||||    
15583502 tcttggagcaaaataaaggagaattggagctgattcgtgccaaaaatatgaagatcttatacaaaaatatcttgcgcaaagaatttgaagatc 15583594  T

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Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 23140288 - 23140197
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||    
23140288 gattcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgcccc 23140197  T

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Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 297 - 389
Target Start/End: Complemental strand, 23552078 - 23551987
Alignment:
297 gattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||| || ||||||||||||||    
23552078 gattcatgccaaaaatatgaagatctcataacaaaatatcttgtgcaaagaattcgaagatcttgtacaataata-aaaaagtggcgcgcccc 23551987  T

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Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 29568890 - 29568801
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||| ||||||| ||||  |||||| ||||| |||||||||||||  |||||||||||||| |||||||||||||||||    
29568890 gaaagatggagtcttcgagcaaaggaaaggagaattggagctaattcatgccaaaaatatgaagatctcatataaaaatatcttgtgcaa 29568801  T

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Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 358
Target Start/End: Complemental strand, 29568798 - 29568738
Alignment:
298 attcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 358  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
29568798 attcatgccaaaaatatgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatc 29568738  T

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Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 25859045 - 25858962
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatctt 338  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||||| |||||  ||||||||||||||||||| ||||||    
25859045 gaaagatggagtcttggagcaaaagaaaggagaattgaagctgattcatgtcaaaaatatgaagatctcatacaaaactatctt 25858962  T

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Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 319 - 373
Target Start/End: Complemental strand, 32441688 - 32441634
Alignment:
319 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
32441688 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaatatata 32441634  T

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Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 389
Target Start/End: Complemental strand, 16134476 - 16134407
Alignment:
319 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| ||||||| ||||||    
16134476 atctcatacaaaaatatcatgtgcaaagaatttgaagatattgtacaataatataa-aagtggcacgcccc 16134407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 345
Target Start/End: Original strand, 44997904 - 44997994
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 345  Q
    ||||||||||||||| ||||||||||||  ||||||  |||| |||||||||||||  || |||||||||| ||||||||| |||||||||    
44997904 gaaagatggagtctttgagcaaaagaaaggagaattgaagcttattcatgccaaaaatataaagatctcatgcaaaaatatattgtgcaaa 44997994  T

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Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 20281829 - 20281889
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
20281829 atgaatatctcatacaaaaatatcctgtgcaaagaatttgaagatcttttacaaatatata 20281889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 358
Target Start/End: Complemental strand, 25337523 - 25337421
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaagaatttgaag 355  Q
    |||||| |||||||||||||||||||   ||| || |||||||||  ||||||||  |||||||||| |||||||||||| ||||||| | | |||||||    
25337523 aaagattgagtcttggagcaaaagaatggagatttggagctgatttgtgccaaaaatatgaagatcttatacaaaaatatattgtgcataaagtttgaag 25337424  T
356 atc 358  Q
    |||    
25337423 atc 25337421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 19927200 - 19927253
Alignment:
319 atctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
19927200 atctcatacaaaaatatcctgcgcaaagaatttgaagatcttgtacaaatatat 19927253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 19927087 - 19927176
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| |||||||||||||||||||||  ||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
19927087 aaagattgagtcttggagcaaaagaaatttgaatttgagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 19927176  T

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Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 344
Target Start/End: Original strand, 20281730 - 20281811
Alignment:
263 gagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||||||||||||||||||  |||||| |||||||||| |||||||||    || |||| |||||||||||||| ||||||    
20281730 gagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaatataaaacatcttatacaaaaatatctggtgcaa 20281811  T

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Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 32441801 - 32441712
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||| |||||||||| ||||||    
32441801 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatagaaaaatatctggtgcaa 32441712  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 390
Target Start/End: Complemental strand, 25858907 - 25858871
Alignment:
354 agatcttgtacaaaaatataacaagtggcgcgcccct 390  Q
    |||||||||||||||||||||||||||||||||||||    
25858907 agatcttgtacaaaaatataacaagtggcgcgcccct 25858871  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 337
Target Start/End: Original strand, 24507003 - 24507085
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatct 337  Q
    |||||| ||||||| ||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||||    
24507003 aaagattgagtctttgagcaaaagaaaagagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatct 24507085  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 11390846 - 11390935
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||| | ||||||    
11390846 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatttggtgcaa 11390935  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 11407507 - 11407596
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||| | ||||||    
11407507 aaagattgagtcttggagcaaaagaaaagagaattggagctgattcgtaccaaaaatataaaagatcttatacaaaaatatttggtgcaa 11407596  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 16134589 - 16134500
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| |||||||||||||||||||  || |||| |||||||||| ||||||||  ||  ||||||| |||||||||||| | ||||||    
16134589 aaagattgagtcttggagcaaaagaaggaaaaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatatggtgcaa 16134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 24371875 - 24371795
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatat 335  Q
    ||||||| ||||||||||| ||||||||  ||| || ||||||||| | |||||||  ||||||||||  | |||||||||    
24371875 gaaagattgagtcttggagaaaaagaaaggagatttggagctgattgaggccaaaactatgaagatcttgtgcaaaaatat 24371795  T

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Target: scaffold0471 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 10100 - 10025
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
10100 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 10025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 10206 - 10126
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatat 335  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||| ||||||||||||    
10206 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatat 10126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 9381 - 9306
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||||||||||    
9381 atgaatatctcatacaaaaatatcatgtgaaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcccc 9306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 9488 - 9399
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaa-gatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| |||||||| || ||||||||  |||||| ||| |||||| ||||||||  ||||| ||||| |||||||||||||| ||||||    
9488 aaagattgagtcttgcagaaaaagaaaggagaattggagttgattcgtgccaaaaatatgaaagatcttatacaaaaatatctggtgcaa 9399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 389
Target Start/End: Complemental strand, 19234 - 19159
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||||||    
19234 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgaacaataatataa-aagtggcgcgcccc 19159  T

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Target: scaffold0251; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 19341 - 19252
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||| ||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
19341 aaagattgagtcttggagcaaatgaaaagagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 19252  T

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Target: scaffold0713 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 345
Target Start/End: Complemental strand, 7040 - 6950
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgcaaa 345  Q
    ||||||||||||||| ||||||||||||  |||||| ||||| |||| ||| ||||  |||||||||| ||||||||||||||||||||||    
7040 gaaagatggagtcttagagcaaaagaaaggagaattggagctaattcgtgcaaaaaatatgaagatctgatacaaaaatatcttgtgcaaa 6950  T

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Target: scaffold0713; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 395
Target Start/End: Complemental strand, 6961 - 6922
Alignment:
356 atcttgtacaaaaatataacaagtggcgcgccccttttgc 395  Q
    ||||||| ||||||||||||||||||||||||||||||||    
6961 atcttgtgcaaaaatataacaagtggcgcgccccttttgc 6922  T

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Target: scaffold0064 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 387
Target Start/End: Original strand, 48589 - 48662
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcc 387  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
48589 atgaatatcccatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaataatataa-aagtggcgcgcc 48662  T

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Target: scaffold0064; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 334
Target Start/End: Original strand, 48482 - 48561
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaata 334  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||| ||||||| |||||||||||    
48482 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaagatcttatacaaaaata 48561  T

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Target: scaffold0058 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 324 - 389
Target Start/End: Original strand, 61654 - 61718
Alignment:
324 atacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
61654 atacaaaaatatcctgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgcccc 61718  T

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Target: scaffold0058; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 344
Target Start/End: Original strand, 61542 - 61630
Alignment:
257 aagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    ||||| ||||||||||||||||||||  |||||| |||||||||| | ||||||  ||  ||||||| |||||||||||||| ||||||    
61542 aagattgagtcttggagcaaaagaaaggagaattggagctgattcgttccaaaaatataaaagatcttatacaaaaatatctggtgcaa 61630  T

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Target: scaffold0057 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 20958 - 21018
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
20958 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatata 21018  T

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Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 20851 - 20940
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||  ||||| |||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
20851 aaagattgagtcttggagcaaaagaaaggagaatcggagctaattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 20940  T

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Target: scaffold0031 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 367
Target Start/End: Original strand, 23063 - 23117
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaa 367  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
23063 atgaatatctcatacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaa 23117  T

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Target: scaffold0031; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 100168 - 100229
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataa 374  Q
    ||||| || ||||||||||||||  ||||||||||||||||||||||||||||| |||||||    
100168 atgaatatgtcatacaaaaatataatgtgcaaagaatttgaagatcttgtacaataatataa 100229  T

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Target: scaffold0031; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 22956 - 23045
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  ||||||  ||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
22956 aaagattgagtcttggagcaaaagaaaggagaattgcagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 23045  T

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Target: scaffold0031; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 100061 - 100150
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| ||||| |||| ||||||||  ||  ||||||| | |||||||||||| ||||||    
100061 aaagattgagtcttggagcaaaagaaaggagaattggagcttattcgtgccaaaaatataaaagatcttacacaaaaatatctggtgcaa 100150  T

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Target: scaffold0916 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 3289 - 3364
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| || ||| ||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||||    
3289 atgaatatatcacacaaaaatatcatgtgcaaagaatttgaagatcttgtacaaatatat-acaagaggcgcgcccc 3364  T

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Target: scaffold0916; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 3182 - 3271
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||  ||||||  |||||||||||||| ||||||    
3182 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatataaaagatcatatacaaaaatatctggtgcaa 3271  T

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Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 337
Target Start/End: Complemental strand, 121 - 39
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatg-aagatctcatacaaaaatatct 337  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||  ||| ||||||| ||||||||||||||    
121 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaaatatgaaagatcttatacaaaaatatct 39  T

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Target: scaffold0096 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 38224 - 38167
Alignment:
331 aatatcttgtgcaaagaatttgaagatcttgtacaaaaatataacaagtggcgcgcccc 389  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
38224 aatattttgtgcaaagaatttgaagatcttgtacaaaaatataa-aagtggcacgcccc 38167  T

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Target: scaffold0096; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 367
Target Start/End: Complemental strand, 38264 - 38210
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaa 367  Q
    ||||| ||||||||||||||||| |||||||||||||||||| || |||| ||||    
38264 atgaatatctcatacaaaaatattttgtgcaaagaatttgaatattttgtgcaaa 38210  T

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Target: scaffold0197 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 9169 - 9109
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatata 373  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||||||| |||| |||||    
9169 atgaatatctcatacaaaaatataatgtgcaaagaatttgaagatcttgttcaaatatata 9109  T

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Target: scaffold0197; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 9276 - 9187
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||| ||||  |||||| |||||||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
9276 aaagattgagtcttggagcaaatgaaaggagaattggagctgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 9187  T

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Target: scaffold0447 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 6217 - 6276
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
6217 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 6276  T

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Target: scaffold0447; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 10831 - 10890
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
10831 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 10890  T

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Target: scaffold0447; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 6132 - 6186
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
6132 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 6186  T

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Target: scaffold0447; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 10746 - 10800
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
10746 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 10800  T

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Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 8826 - 8885
Alignment:
313 atgaagatctcatacaaaaatatcttgtgcaaagaatttgaagatcttgtacaaaaatat 372  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
8826 atgaatatctcatacaaaaatatcatgtgtaaaaaatttgaagatcttgtacaaatatat 8885  T

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Target: scaffold0383; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 8741 - 8795
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaa 310  Q
    |||||| ||||||||||||||||||||  |||||| |||||||||| ||||||||    
8741 aaagattgagtcttggagcaaaagaaaggagaattggagctgattcgtgccaaaa 8795  T

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Target: scaffold0213 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 26667 - 26756
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcat-gaagatctcatacaaaaatatcttgtgcaa 344  Q
    |||||| ||||||||||||||||||||  |||||| ||| |||||| ||||||||  ||  ||||||| |||||||||||||| ||||||    
26667 aaagattgagtcttggagcaaaagaaaggagaattggagttgattcgtgccaaaaatataaaagatcttatacaaaaatatctggtgcaa 26756  T

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Target: scaffold0213; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 21370 - 21456
Alignment:
256 aaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatcttgtgca 343  Q
    |||||| ||||||||||||||||||||  ||| || ||| |||||  ||||||||  |||||||||  ||||||||||||||||||||    
21370 aaagattgagtcttggagcaaaagaaaggaga-ttggagttgatttgtgccaaaaatatgaagatcatatacaaaaatatcttgtgca 21456  T

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Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 167827 - 167908
Alignment:
255 gaaagatggagtcttggagcaaaagaaataagaattagagctgattcatgccaaaatcatgaagatctcatacaaaaatatc 336  Q
    ||||||| |||||||||||||||||||||| || || ||||||||| | |||||||  ||||||||||  | ||||||||||    
167827 gaaagattgagtcttggagcaaaagaaataggatttggagctgattgaggccaaaaatatgaagatcttgtgcaaaaatatc 167908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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