View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16236_high_3 (Length: 298)
Name: NF16236_high_3
Description: NF16236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16236_high_3 |
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Alignment Details
Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 11 - 284
Target Start/End: Complemental strand, 37028890 - 37028617
Alignment:
| Q |
11 |
cataggattagtacatgcatattgcaataactgctacttgctaatgagttatggttttagctgtatatgtcccaacaactgaattttgtaaatttcctat |
110 |
Q |
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| T |
37028890 |
cataggattagtacatgcatattgcaataactgctacttgctaatgagttatggttttagctgtatatgtcccaacaactgaattttgtaaatttcctat |
37028791 |
T |
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| Q |
111 |
ttaagtagtttttctataattaacatattgtcatagctgtttttgttctcataaagttgtgatatttttctttgcaaacgacaaaatgtactataaacta |
210 |
Q |
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| T |
37028790 |
ttaagtagtttttctataattaacatattgtcatagctgtttttgttttcataaaattgtgatatttttctttgcaaacgccaaaatgtactataaacta |
37028691 |
T |
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| Q |
211 |
taatatagtaggtcttattgaaccatcatgtgagtttatgaagccgaattactccaaaattggggaattatctg |
284 |
Q |
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| T |
37028690 |
taatatagtaggtcttattgaaccatcatgtgagtttatgaagccgaattactccaaaattggggaattatctg |
37028617 |
T |
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