View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16239_low_1 (Length: 653)

Name: NF16239_low_1
Description: NF16239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16239_low_1
NF16239_low_1
[»] chr1 (42 HSPs)
chr1 (1-643)||(13379434-13380099)
chr1 (1-229)||(51443167-51443405)
chr1 (363-637)||(51442845-51443102)
chr1 (10-178)||(8310887-8311054)
chr1 (10-219)||(31654219-31654439)
chr1 (448-643)||(24302420-24302597)
chr1 (363-472)||(51443077-51443186)
chr1 (162-229)||(51443109-51443177)
chr1 (456-532)||(2269107-2269182)
chr1 (387-446)||(51443160-51443220)
chr1 (251-306)||(35068948-35069002)
chr1 (250-305)||(37186816-37186870)
chr1 (250-292)||(19051013-19051055)
chr1 (251-291)||(41445031-41445071)
chr1 (170-213)||(51443041-51443085)
chr1 (251-306)||(7204508-7204562)
chr1 (250-305)||(8312527-8312581)
chr1 (250-305)||(12502775-12502829)
chr1 (400-439)||(24302579-24302618)
chr1 (250-305)||(43837161-43837215)
chr1 (250-292)||(270323-270365)
chr1 (482-532)||(11917681-11917731)
chr1 (486-532)||(20600967-20601013)
chr1 (145-202)||(24302641-24302699)
chr1 (398-427)||(8310921-8310950)
chr1 (256-305)||(8793180-8793228)
chr1 (250-291)||(19338178-19338219)
chr1 (250-291)||(20164073-20164114)
chr1 (250-291)||(25820950-25820991)
chr1 (250-291)||(33845604-33845645)
chr1 (250-291)||(33948333-33948374)
chr1 (312-353)||(39606411-39606452)
chr1 (250-291)||(39606492-39606533)
chr1 (250-291)||(40958574-40958615)
chr1 (250-291)||(43025978-43026019)
chr1 (250-291)||(43676024-43676065)
chr1 (250-291)||(48392043-48392084)
chr1 (250-291)||(50248116-50248157)
chr1 (107-144)||(51443121-51443158)
chr1 (251-291)||(29803174-29803214)
chr1 (251-291)||(36018965-36019005)
chr1 (251-291)||(45191561-45191601)
[»] chr3 (68 HSPs)
chr3 (363-642)||(40887982-40888261)
chr3 (1-178)||(40888392-40888568)
chr3 (363-643)||(8655548-8655819)
chr3 (460-643)||(29454257-29454439)
chr3 (418-643)||(52640692-52640913)
chr3 (363-643)||(15989760-15990038)
chr3 (454-643)||(19544006-19544187)
chr3 (1-178)||(29453925-29454096)
chr3 (363-472)||(52640886-52640997)
chr3 (459-537)||(11649936-11650014)
chr3 (251-306)||(7131503-7131557)
chr3 (74-144)||(19544398-19544468)
chr3 (483-532)||(10051160-10051209)
chr3 (115-178)||(29454123-29454184)
chr3 (158-229)||(52640978-52641050)
chr3 (89-145)||(52641082-52641138)
chr3 (486-532)||(3415562-3415608)
chr3 (170-213)||(40888199-40888244)
chr3 (145-209)||(9013788-9013853)
chr3 (162-229)||(15989960-15990029)
chr3 (363-445)||(19544169-19544253)
chr3 (397-429)||(29454162-29454194)
chr3 (163-233)||(52640915-52640987)
chr3 (250-305)||(2096583-2096638)
chr3 (250-305)||(29212063-29212118)
chr3 (115-178)||(40888302-40888365)
chr3 (250-305)||(41464739-41464794)
chr3 (250-292)||(2666298-2666340)
chr3 (250-292)||(31828485-31828527)
chr3 (115-157)||(40888281-40888323)
chr3 (250-292)||(51112466-51112508)
chr3 (372-445)||(52640972-52641046)
chr3 (250-291)||(1242304-1242345)
chr3 (250-291)||(3440813-3440854)
chr3 (250-291)||(3917853-3917894)
chr3 (250-291)||(4232177-4232218)
chr3 (250-291)||(5998782-5998823)
chr3 (250-291)||(8128290-8128331)
chr3 (250-291)||(8381166-8381207)
chr3 (250-291)||(8508019-8508060)
chr3 (169-229)||(8655565-8655626)
chr3 (250-291)||(9583423-9583464)
chr3 (250-291)||(10229044-10229085)
chr3 (250-291)||(10473914-10473955)
chr3 (250-291)||(11029751-11029792)
chr3 (250-291)||(13525256-13525297)
chr3 (250-291)||(13777559-13777600)
chr3 (250-291)||(15003715-15003756)
chr3 (250-291)||(19163721-19163762)
chr3 (250-291)||(24910288-24910329)
chr3 (250-291)||(27396940-27396981)
chr3 (250-291)||(28170979-28171020)
chr3 (133-178)||(29454099-29454144)
chr3 (177-213)||(29454111-29454148)
chr3 (250-291)||(32960978-32961019)
chr3 (250-291)||(34397767-34397808)
chr3 (250-291)||(38127842-38127883)
chr3 (250-291)||(38485959-38486000)
chr3 (398-427)||(40888294-40888323)
chr3 (250-291)||(47410752-47410793)
chr3 (250-291)||(48555923-48555964)
chr3 (251-291)||(7552682-7552722)
chr3 (251-291)||(11076492-11076532)
chr3 (251-291)||(17501014-17501054)
chr3 (251-291)||(34481793-34481833)
chr3 (251-291)||(37312615-37312655)
chr3 (251-291)||(53669712-53669752)
chr3 (251-291)||(54097442-54097482)
[»] chr4 (66 HSPs)
chr4 (363-643)||(10335421-10335702)
chr4 (363-606)||(41942478-41942722)
chr4 (448-643)||(41951463-41951659)
chr4 (396-617)||(18286116-18286334)
chr4 (33-178)||(10335787-10335931)
chr4 (33-178)||(41942723-41942866)
chr4 (82-178)||(18286411-18286507)
chr4 (432-535)||(31518544-31518649)
chr4 (107-229)||(10335683-10335816)
chr4 (149-229)||(31518675-31518754)
chr4 (107-178)||(18286311-18286382)
chr4 (165-229)||(10335625-10335690)
chr4 (177-229)||(18286291-18286344)
chr4 (367-427)||(18286345-18286406)
chr4 (372-445)||(31518669-31518741)
chr4 (250-303)||(37759506-37759558)
chr4 (250-303)||(50981729-50981781)
chr4 (162-213)||(18286349-18286401)
chr4 (250-305)||(28758452-28758506)
chr4 (387-446)||(10335676-10335736)
chr4 (162-233)||(41942641-41942713)
chr4 (177-228)||(41942704-41942756)
chr4 (250-305)||(32057723-32057777)
chr4 (250-292)||(12821249-12821291)
chr4 (251-305)||(25698939-25698993)
chr4 (158-213)||(31518789-31518848)
chr4 (251-292)||(4379391-4379432)
chr4 (250-291)||(5333206-5333247)
chr4 (250-291)||(6487933-6487974)
chr4 (250-291)||(7512854-7512895)
chr4 (250-291)||(7944224-7944265)
chr4 (250-291)||(12315930-12315971)
chr4 (250-291)||(13389107-13389148)
chr4 (250-291)||(14285182-14285223)
chr4 (250-291)||(16476937-16476978)
chr4 (250-291)||(18813457-18813498)
chr4 (250-291)||(23974642-23974683)
chr4 (250-291)||(24712175-24712216)
chr4 (250-291)||(25003819-25003860)
chr4 (250-291)||(28010051-28010092)
chr4 (250-291)||(30044584-30044625)
chr4 (250-291)||(31263501-31263542)
chr4 (75-136)||(31518828-31518888)
chr4 (250-291)||(32104010-32104051)
chr4 (250-291)||(33416580-33416621)
chr4 (250-291)||(36526141-36526182)
chr4 (250-291)||(36860849-36860890)
chr4 (250-291)||(37050788-37050829)
chr4 (250-291)||(37166225-37166266)
chr4 (250-291)||(42856650-42856691)
chr4 (250-291)||(46488117-46488158)
chr4 (250-291)||(49882709-49882750)
chr4 (250-291)||(50779791-50779832)
chr4 (250-287)||(51578967-51579004)
chr4 (251-291)||(579243-579283)
chr4 (251-291)||(9569562-9569602)
chr4 (399-427)||(10335779-10335807)
chr4 (251-291)||(13632177-13632217)
chr4 (251-291)||(24550900-24550940)
chr4 (250-290)||(24870686-24870726)
chr4 (251-291)||(31583604-31583644)
chr4 (251-291)||(34567114-34567154)
chr4 (251-291)||(34684289-34684329)
chr4 (387-438)||(41942704-41942756)
chr4 (251-291)||(42411989-42412029)
chr4 (251-291)||(48628465-48628505)
[»] chr8 (47 HSPs)
chr8 (363-643)||(21231226-21231508)
chr8 (405-643)||(9884291-9884525)
chr8 (413-643)||(9817586-9817812)
chr8 (448-643)||(42076878-42077074)
chr8 (1-229)||(21231489-21231727)
chr8 (1-178)||(9817891-9818067)
chr8 (44-227)||(42077116-42077309)
chr8 (366-445)||(42077050-42077130)
chr8 (162-233)||(42077052-42077124)
chr8 (454-537)||(24423750-24423833)
chr8 (107-178)||(9817806-9817878)
chr8 (116-178)||(9817849-9817911)
chr8 (459-515)||(29115134-29115190)
chr8 (82-144)||(9881413-9881475)
chr8 (170-227)||(21231433-21231491)
chr8 (483-532)||(24499435-24499484)
chr8 (251-303)||(35738847-35738899)
chr8 (252-308)||(37820895-37820950)
chr8 (250-291)||(8525201-8525242)
chr8 (250-306)||(24197827-24197882)
chr8 (399-446)||(21231482-21231529)
chr8 (250-289)||(33540242-33540281)
chr8 (250-292)||(2442846-2442888)
chr8 (250-292)||(13403419-13403461)
chr8 (250-292)||(16501733-16501775)
chr8 (250-291)||(4312220-4312261)
chr8 (250-291)||(4430735-4430776)
chr8 (250-291)||(4977034-4977075)
chr8 (250-291)||(6317387-6317428)
chr8 (250-291)||(10096699-10096740)
chr8 (250-291)||(14243786-14243827)
chr8 (250-291)||(23681097-23681138)
chr8 (250-291)||(24655061-24655102)
chr8 (250-291)||(25063427-25063468)
chr8 (250-291)||(25199133-25199174)
chr8 (250-291)||(26675644-26675685)
chr8 (250-291)||(26690781-26690822)
chr8 (250-291)||(27817449-27817490)
chr8 (250-291)||(27849743-27849784)
chr8 (251-292)||(29158889-29158930)
chr8 (250-291)||(34540064-34540105)
chr8 (250-291)||(34711555-34711596)
chr8 (250-291)||(38953480-38953521)
chr8 (250-291)||(40772565-40772606)
chr8 (250-291)||(44814950-44814991)
chr8 (251-291)||(27928245-27928285)
chr8 (251-291)||(38070482-38070522)
[»] scaffold0022 (7 HSPs)
scaffold0022 (375-643)||(2534-2802)
scaffold0022 (1-178)||(2299-2476)
scaffold0022 (158-229)||(2527-2599)
scaffold0022 (116-178)||(2456-2521)
scaffold0022 (177-213)||(2488-2525)
scaffold0022 (107-144)||(2550-2587)
scaffold0022 (387-446)||(2488-2548)
[»] chr7 (61 HSPs)
chr7 (363-642)||(8312238-8312520)
chr7 (363-643)||(9745708-9745988)
chr7 (1-178)||(9745401-9745577)
chr7 (448-643)||(13169993-13170187)
chr7 (15-230)||(8312033-8312258)
chr7 (1-178)||(17855212-17855378)
chr7 (33-178)||(10529230-10529374)
chr7 (20-178)||(13169773-13169933)
chr7 (366-471)||(13169937-13170043)
chr7 (65-177)||(29587808-29587918)
chr7 (456-537)||(46002215-46002296)
chr7 (162-229)||(13169943-13170011)
chr7 (116-178)||(17855358-17855420)
chr7 (588-639)||(31211793-31211843)
chr7 (250-305)||(46021430-46021484)
chr7 (483-532)||(65494-65543)
chr7 (115-174)||(9745646-9745703)
chr7 (177-229)||(13169901-13169953)
chr7 (250-305)||(9506841-9506895)
chr7 (115-178)||(9745604-9745667)
chr7 (496-537)||(3387938-3387979)
chr7 (496-537)||(31211668-31211709)
chr7 (250-306)||(2354795-2354851)
chr7 (387-446)||(8312204-8312264)
chr7 (387-439)||(13169901-13169953)
chr7 (250-292)||(8856361-8856403)
chr7 (250-292)||(23789415-23789457)
chr7 (183-213)||(29587851-29587881)
chr7 (250-292)||(41708543-41708585)
chr7 (312-350)||(43416368-43416406)
chr7 (312-353)||(1869822-1869863)
chr7 (250-291)||(1869903-1869944)
chr7 (250-291)||(3497517-3497558)
chr7 (250-291)||(3861336-3861377)
chr7 (250-291)||(4106641-4106682)
chr7 (250-291)||(4674309-4674350)
chr7 (250-291)||(4887513-4887554)
chr7 (177-213)||(9745544-9745581)
chr7 (177-213)||(9745634-9745671)
chr7 (250-291)||(12014732-12014773)
chr7 (250-291)||(12961823-12961864)
chr7 (250-291)||(16816778-16816819)
chr7 (250-291)||(18945011-18945052)
chr7 (250-291)||(28382665-28382706)
chr7 (250-291)||(31717384-31717425)
chr7 (250-291)||(35157084-35157125)
chr7 (250-291)||(35849382-35849423)
chr7 (250-291)||(36251738-36251779)
chr7 (250-291)||(38678163-38678204)
chr7 (250-291)||(40011989-40012030)
chr7 (250-291)||(40013351-40013392)
chr7 (250-291)||(43723399-43723440)
chr7 (250-291)||(48612604-48612645)
chr7 (251-291)||(4227421-4227461)
chr7 (251-291)||(10061017-10061057)
chr7 (387-426)||(17855387-17855427)
chr7 (317-353)||(34708680-34708716)
chr7 (260-292)||(35289931-35289963)
chr7 (253-305)||(39580551-39580602)
chr7 (251-291)||(40656109-40656149)
chr7 (317-353)||(46734202-46734238)
[»] chr2 (71 HSPs)
chr2 (363-643)||(22404315-22404592)
chr2 (363-643)||(29045845-29046121)
chr2 (363-643)||(27976501-27976784)
chr2 (363-643)||(28063029-28063312)
chr2 (363-643)||(16329421-16329698)
chr2 (1-178)||(16130785-16130959)
chr2 (1-178)||(27976862-27977029)
chr2 (1-178)||(28063390-28063557)
chr2 (10-171)||(22404047-22404209)
chr2 (460-617)||(16130465-16130623)
chr2 (54-178)||(16329207-16329327)
chr2 (46-168)||(29046299-29046420)
chr2 (116-229)||(29046102-29046226)
chr2 (107-178)||(29046122-29046193)
chr2 (107-164)||(27976834-27976891)
chr2 (107-164)||(28063362-28063419)
chr2 (116-178)||(29046248-29046309)
chr2 (130-178)||(27976785-27976833)
chr2 (130-178)||(28063313-28063361)
chr2 (363-445)||(16130611-16130694)
chr2 (115-178)||(16130695-16130758)
chr2 (254-306)||(13491100-13491151)
chr2 (170-213)||(16130633-16130677)
chr2 (253-305)||(17052632-17052683)
chr2 (114-178)||(22404250-22404314)
chr2 (387-446)||(27976758-27976818)
chr2 (387-446)||(28063286-28063346)
chr2 (115-178)||(16329357-16329420)
chr2 (162-228)||(22404324-22404391)
chr2 (250-291)||(10392732-10392773)
chr2 (487-532)||(19713967-19714012)
chr2 (165-213)||(27976723-27976772)
chr2 (177-229)||(27976765-27976818)
chr2 (165-213)||(28063251-28063300)
chr2 (177-229)||(28063293-28063346)
chr2 (170-229)||(29046044-29046104)
chr2 (387-446)||(29046095-29046155)
chr2 (250-301)||(816425-816475)
chr2 (250-305)||(32517817-32517871)
chr2 (251-305)||(18741398-18741451)
chr2 (486-532)||(19704373-19704419)
chr2 (185-227)||(22404290-22404332)
chr2 (395-437)||(22404290-22404332)
chr2 (250-304)||(22999151-22999204)
chr2 (250-303)||(637041-637093)
chr2 (250-291)||(4014813-4014854)
chr2 (250-291)||(6731629-6731670)
chr2 (250-291)||(11061469-11061510)
chr2 (250-291)||(11543799-11543840)
chr2 (250-291)||(13267975-13268016)
chr2 (177-213)||(16130781-16130818)
chr2 (173-229)||(16329441-16329498)
chr2 (250-291)||(20251485-20251526)
chr2 (250-291)||(21840449-21840490)
chr2 (250-291)||(24381332-24381373)
chr2 (1-34)||(29046419-29046452)
chr2 (250-291)||(31054135-31054176)
chr2 (250-291)||(33607130-33607171)
chr2 (250-291)||(34481671-34481712)
chr2 (250-291)||(34667131-34667172)
chr2 (250-291)||(35476490-35476531)
chr2 (250-291)||(36216753-36216794)
chr2 (250-291)||(36754741-36754782)
chr2 (250-291)||(36755035-36755076)
chr2 (250-291)||(36794891-36794932)
chr2 (250-291)||(39070106-39070147)
chr2 (250-291)||(40812104-40812145)
chr2 (250-291)||(44276350-44276391)
chr2 (250-291)||(45049472-45049513)
chr2 (251-291)||(727290-727330)
chr2 (251-287)||(29360631-29360667)
[»] scaffold0016 (6 HSPs)
scaffold0016 (363-643)||(108388-108664)
scaffold0016 (1-178)||(108121-108303)
scaffold0016 (107-168)||(108316-108377)
scaffold0016 (116-227)||(108283-108405)
scaffold0016 (162-219)||(108397-108455)
scaffold0016 (387-446)||(108354-108414)
[»] scaffold0028 (5 HSPs)
scaffold0028 (455-643)||(147831-148014)
scaffold0028 (25-136)||(148141-148253)
scaffold0028 (149-213)||(148105-148170)
scaffold0028 (108-155)||(148090-148137)
scaffold0028 (363-426)||(148102-148166)
[»] scaffold0150 (1 HSPs)
scaffold0150 (455-643)||(35199-35382)
[»] chr6 (24 HSPs)
chr6 (251-305)||(17210465-17210519)
chr6 (483-532)||(22625553-22625602)
chr6 (483-532)||(29955031-29955080)
chr6 (487-532)||(12492291-12492336)
chr6 (250-305)||(9297832-9297886)
chr6 (250-292)||(735529-735571)
chr6 (250-291)||(1855093-1855134)
chr6 (250-291)||(2959080-2959121)
chr6 (250-291)||(4480561-4480602)
chr6 (250-291)||(7098893-7098934)
chr6 (250-291)||(8329558-8329599)
chr6 (250-291)||(8448142-8448183)
chr6 (250-291)||(8456946-8456987)
chr6 (250-291)||(10181132-10181173)
chr6 (250-291)||(10330892-10330933)
chr6 (250-283)||(11837922-11837955)
chr6 (250-291)||(12795019-12795060)
chr6 (250-291)||(18861767-18861808)
chr6 (250-291)||(29183745-29183786)
chr6 (250-291)||(32107835-32107876)
chr6 (251-291)||(5660486-5660526)
chr6 (251-291)||(6266719-6266759)
chr6 (251-291)||(8939713-8939753)
chr6 (251-291)||(31205184-31205224)
[»] chr5 (41 HSPs)
chr5 (483-532)||(31094964-31095013)
chr5 (250-291)||(33617183-33617224)
chr5 (250-306)||(6525913-6525968)
chr5 (442-537)||(18926670-18926764)
chr5 (250-305)||(24406638-24406692)
chr5 (250-305)||(26266999-26267054)
chr5 (250-292)||(12878120-12878162)
chr5 (250-304)||(30528058-30528111)
chr5 (250-304)||(30568398-30568451)
chr5 (250-292)||(39528016-39528058)
chr5 (250-291)||(1833319-1833360)
chr5 (250-291)||(4165046-4165087)
chr5 (250-291)||(6029699-6029740)
chr5 (250-291)||(6219191-6219232)
chr5 (250-291)||(9640534-9640575)
chr5 (250-291)||(16496687-16496728)
chr5 (250-291)||(16906429-16906470)
chr5 (250-291)||(20695483-20695524)
chr5 (250-291)||(23074644-23074685)
chr5 (250-291)||(23311173-23311214)
chr5 (250-291)||(24443867-24443908)
chr5 (250-291)||(25328304-25328345)
chr5 (250-291)||(26802421-26802462)
chr5 (250-291)||(26809971-26810012)
chr5 (250-291)||(26824998-26825039)
chr5 (250-291)||(27389927-27389968)
chr5 (250-291)||(29119693-29119734)
chr5 (250-291)||(34856668-34856709)
chr5 (250-291)||(34930312-34930353)
chr5 (250-291)||(36569366-36569407)
chr5 (250-291)||(36790315-36790356)
chr5 (250-291)||(36854158-36854199)
chr5 (250-291)||(37191331-37191372)
chr5 (250-291)||(38683015-38683056)
chr5 (250-291)||(40044916-40044957)
chr5 (250-291)||(40318785-40318826)
chr5 (250-291)||(41071149-41071190)
chr5 (250-291)||(42448298-42448339)
chr5 (251-291)||(18115180-18115220)
chr5 (251-291)||(24652315-24652355)
chr5 (251-291)||(29806654-29806694)
[»] scaffold1028 (1 HSPs)
scaffold1028 (483-532)||(1373-1422)
[»] scaffold0631 (1 HSPs)
scaffold0631 (483-532)||(4841-4890)
[»] scaffold0057 (1 HSPs)
scaffold0057 (483-532)||(76039-76088)
[»] scaffold0160 (1 HSPs)
scaffold0160 (251-306)||(22156-22210)
[»] scaffold0402 (1 HSPs)
scaffold0402 (250-291)||(1241-1282)
[»] scaffold0287 (1 HSPs)
scaffold0287 (250-291)||(1058-1099)
[»] scaffold0013 (1 HSPs)
scaffold0013 (250-291)||(90656-90697)
[»] scaffold0595 (1 HSPs)
scaffold0595 (251-291)||(432-472)
[»] scaffold0515 (1 HSPs)
scaffold0515 (251-291)||(2565-2605)
[»] scaffold0306 (1 HSPs)
scaffold0306 (251-291)||(2565-2605)
[»] scaffold0244 (1 HSPs)
scaffold0244 (251-291)||(7758-7798)


Alignment Details
Target: chr1 (Bit Score: 475; Significance: 0; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 1 - 643
Target Start/End: Complemental strand, 13380099 - 13379434
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13380099 attttgaagtttagtgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcataacatgcatatcattg 13380000  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt----------caatggattt-t 189  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| |||||||||          |||||||||| |    
T  13379999 catttgatggatctttaagtgtcaaatgaggcgattaatattatttcaatgaatttataagtaccaaatggggcgattattattatttcaatggatttat 13379900  T
Q  190 aagtgccaaatggggcgattattaatatataccaaatgggacgannnnnnnnnnnnnnnngtagatagaagagatggcaaagccataataaactcacaca 289  Q
    |||||||||||||||||||||||| |||||||||||||||||||                |||||||||||||||||||||||||||||||||||||||     
T  13379899 aagtgccaaatggggcgattattattatataccaaatgggacgattttttttttttttg-gtagatagaagagatggcaaagccataataaactcacacg 13379801  T
Q  290 caacaaagtggaggtatgaaccccggac-------------taacaatatcggcatttttgccaattgagttaggacaatgggaaaattattatatgcca 376  Q
    |||||||||| ||||||||||||||| |             ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13379800 caacaaagtgaaggtatgaaccccggtcatgatgtccggtctaacaatatcggcatttttgccaattgagctaggacaatgggaaaattattatatgcca 13379701  T
Q  377 aatgcggcgattcaattgattttaagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaaatggggcgattaaaa 476  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13379700 aatgtggcgattcaattgattttaagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaaatgggacgattaaaa 13379601  T
Q  477 ctattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtcttgtgtttgttcttata 576  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13379600 ctattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtcttgtgtttgttcttata 13379501  T
Q  577 gcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13379500 gcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 13379434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 51443405 - 51443167
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaa-gagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcatt 99  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||| |||||||||||||||| |||||    
T  51443405 attttgaagtatagtgatgatgtgaaattcataattatgtggttcaaagagtccgaaaagtttgtaatttatagaaa-agtgcatagcatgcatgtcatt 51443307  T
Q  100 gcatttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcga----------ttcaatggattt- 188  Q
    ||||||||||||||| |||||| ||||| |||||||||  ||||||| ||||||||| ||||||||||| |||||||          ||||||||||||     
T  51443306 gcatttgatggatctctaagtgccaaattgggcgattatcattattt-aatggatttctaagtgccaaatggggcgattattattatttcaatggattta 51443208  T
Q  189 taagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  51443207 taagtgccaaatggggcgattattattatatgccaaatggg 51443167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 363 - 637
Target Start/End: Complemental strand, 51443102 - 51442845
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||||| |||| ||||||||||| |||||| |||||||||||| |||||| ||||||||  | |||||||| ||||||||||||||||| |||    
T  51443102 attattatatgccgaatggggcgattcaatggatttttaagtgccaaatggggcgatcattattat--gccaaatggggcgattctttattatatgccaa 51443005  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
     |||||||||| |||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||               | |||||    
T  51443004 ttggggcgatttaaactattatgccaattgggacgatatccgaatcatgatctatttgcatttcatgcatctgcatca---------------gagtctt 51442920  T
Q  562 gtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttg 637  Q
    ||||||||| |||| | || ||||| ||||||||||||||| || || ||||||||| ||||||||||||||||||    
T  51442919 gtgtttgtttttatggtatattttaaagtgatgaatattttgaattagaaagaaatg-ttttagcacaattccttg 51442845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 8311054 - 8310887
Alignment:
Q  10 tttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatg 109  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| |||| ||  |||||||||||||| |||||||||||||| |||     
T  8311054 tttagtgatgatgtgaaattcataaatatgtggttcaagagtcgaaaaagtttgtaatttacagcgagagtgcatagcatacatatcattgcattcgat- 8310956  T
Q  110 gatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||| ||||||| |||||| |||||||| ||||||||||||||| || |||||| |||| ||| |||||    
T  8310955 gatcattaagtgccaaatgaggcgattattattatttcaatggaattttaagtgtcaaatgggacgatt 8310887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 10 - 219
Target Start/End: Complemental strand, 31654439 - 31654219
Alignment:
Q  10 tttaatgatgatgtgaaattcataa-ttatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgat 108  Q
    |||| |||| |||| |||||||||| |||||||||||||||||| ||||| |||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  31654439 tttagtgataatgtaaaattcataaattatgtggttcaagagtctgaaaaatttgtaatttatagaaa-agtgcatagcatgcatatcattgtatttgat 31654341  T
Q  109 ggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcga----------ttcaatggattt-taagtgcca 197  Q
    |||||||||||||| |||||||| |||||  ||||||||||||| ||| || ||| |||| ||| |||          |||||||||||| |||||| ||    
T  31654340 ggatctttaagtgttaaatggggtgattatcattatttcaatggttttctatgtgtcaaatgggacgattattattatttcaatggatttataagtgtca 31654241  T
Q  198 aatggggcgattattaatatat 219  Q
    |||||||||||||||| |||||    
T  31654240 aatggggcgattattattatat 31654219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 448 - 643
Target Start/End: Complemental strand, 24302597 - 24302420
Alignment:
Q  448 ttattatatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacatt 547  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||                  ||||||    
T  24302597 ttattatatgtcaaatggggtgattaaaactattatgccaattgggacgatatccaaatcatggtctatttgcatt------------------aacatt 24302516  T
Q  548 gagttttgggtcttgtg-tttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||| |||||||||||| ||| ||||||||| || ||||| ||||||||| |||||||||||||| |||||| ||||| ||||||||| ||||||||    
T  24302515 gagtcttgggtcttgtgttttcttcttatagtatattttagagtgatgaacattttaaactaaaacgaaatg-ttttaacacaattccatgatgatg 24302420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 472
Target Start/End: Complemental strand, 51443186 - 51443077
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    |||||||||||||||||| ||||||||||| |||||| ||||| |||||| |||||||||||||||||| | |||||| |||||  |||||||||| | |    
T  51443186 attattatatgccaaatggggcgattcaatggatttttaagtgtcaaatggggcgattattattatatgccgaatggggcgatt-attattatatgccga 51443088  T
Q  462 atggggcgatt 472  Q
    |||||||||||    
T  51443087 atggggcgatt 51443077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 51443177 - 51443109
Alignment:
Q  162 tgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||| ||||| || ||||||    
T  51443177 tgccaaatggggcgattcaatggatttttaagtgtcaaatggggcgattattattatatgccgaatggg 51443109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 456 - 532
Target Start/End: Complemental strand, 2269182 - 2269107
Alignment:
Q  456 tgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||| |||||||| |  || |||||||||||||||| ||||| |||||||||||| |||||| |||||||||    
T  2269182 tgtcaaatgaggcgattatat-tactatgccaattggggcgctatcctgatcatggtctagttgcatctcatgcatc 2269107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 51443220 - 51443160
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  51443220 ttcaatggatttataagtgccaaatggggcgattattattatatgccaaatggggcgattc 51443160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 35069002 - 35068948
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggtat 306  Q
    |||||||| |||||||||||||| | |||||||||||||| |||||||||||||||    
T  35069002 tagatagacgagatggcaaagccgtcataaactcacacac-acaaagtggaggtat 35068948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 37186816 - 37186870
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    |||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||    
T  37186816 gtagatagaagagatgacaaagccatcataaactcaaacac-acaaagtggaggta 37186870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 19051055 - 19051013
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  19051055 gtagatagacgagatggcaaagccatcataaactcacacacaa 19051013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 41445031 - 41445071
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  41445031 tagatagacgaaatggcaaagccataataaactcacacaca 41445071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 51443085 - 51443041
Alignment:
Q  170 ggggcgattcaatggatttt-aagtgccaaatggggcgattatta 213  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  51443085 ggggcgattcaatggatttttaagtgccaaatggggcgatcatta 51443041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 7204508 - 7204562
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggtat 306  Q
    ||||||||||| ||||||||||||  ||||||||||| || |||||||||||||||    
T  7204508 tagatagaagacatggcaaagccaccataaactcacatac-acaaagtggaggtat 7204562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 8312527 - 8312581
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||| |||||||||||||||||  |||||||||| ||| ||||||||||||||    
T  8312527 gtagataaaagagatggcaaagccaccataaactcactcac-acaaagtggaggta 8312581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 12502829 - 12502775
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||| ||||||| |||||||| |||||||||||||| ||||||| ||||||    
T  12502829 gtagatagaggagatggtaaagccatcataaactcacacac-acaaagttgaggta 12502775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 439
Target Start/End: Complemental strand, 24302618 - 24302579
Alignment:
Q  400 aagtgccaaatgaggcgattattattatatgacaaatggg 439  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  24302618 aagttccaaatgaggcgattattattatatgtcaaatggg 24302579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 43837215 - 43837161
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    |||||||||||||||||||||| ||| ||||||| |||||| | ||||||||||||    
T  43837215 gtagatagaagagatggcaaagtcatgataaacttacacac-ataaagtggaggta 43837161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 270323 - 270365
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  270323 gtagatagacgaaatggcaaagccattataaactcacacacaa 270365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 482 - 532
Target Start/End: Complemental strand, 11917731 - 11917681
Alignment:
Q  482 atgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||  |||||||||| | |||||| |||||||||    
T  11917731 atgccaattggggcgatatctagatcatggtcaagttgcatgtcatgcatc 11917681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 532
Target Start/End: Complemental strand, 20601013 - 20600967
Alignment:
Q  486 caattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    |||||||||||||||| ||||||||||| | |||||| |||||||||    
T  20601013 caattggggcgatatctggatcatggtcaagttgcatctcatgcatc 20600967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 24302699 - 24302641
Alignment:
Q  145 ttcaatggatttataagtgccaaagggggcgattcaatgga-ttttaagtgccaaatgg 202  Q
    |||||||||||| |||||| |||| | |||||||||||| | |||||||||||||||||    
T  24302699 ttcaatggatttttaagtgtcaaatgaggcgattcaatgaatttttaagtgccaaatgg 24302641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 427
Target Start/End: Complemental strand, 8310950 - 8310921
Alignment:
Q  398 ttaagtgccaaatgaggcgattattattat 427  Q
    ||||||||||||||||||||||||||||||    
T  8310950 ttaagtgccaaatgaggcgattattattat 8310921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 8793180 - 8793228
Alignment:
Q  256 agaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||||| |||| ||| |||||||||||||| ||||||||||||||    
T  8793180 agaagagatggtaaagtcatcataaactcacacac-acaaagtggaggta 8793228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 19338178 - 19338219
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  19338178 gtagatagacgaaatggcaaagccattataaactcacacaca 19338219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 20164073 - 20164114
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  20164073 gtagatagacgaaatggcaaagccattataaactcacacaca 20164114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 25820950 - 25820991
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  25820950 gtagatagacgaaatggcaaagccattataaactcacacaca 25820991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 33845604 - 33845645
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  33845604 gtagatagacgaaatggcaaagccattataaactcacacaca 33845645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 33948374 - 33948333
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  33948374 gtagatagacgaaatggcaaagccattataaactcacacaca 33948333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 39606452 - 39606411
Alignment:
Q  312 ccggactaacaatatcggcatttttgccaattgagttaggac 353  Q
    |||| |||||||||||||||||||||||| ||||| ||||||    
T  39606452 ccggcctaacaatatcggcatttttgccagttgagctaggac 39606411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 39606533 - 39606492
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  39606533 gtagatagacgaaatggcaaagccattataaactcacacaca 39606492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 40958574 - 40958615
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  40958574 gtagatagacgaaatggcaaagccattataaactcacacaca 40958615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 43026019 - 43025978
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  43026019 gtagatagacgaaatggcaaagccattataaactcacacaca 43025978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 43676024 - 43676065
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  43676024 gtagatagacgaaatggcaaagccattataaactcacacaca 43676065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 48392084 - 48392043
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  48392084 gtagatagacgaaatggcaaagccattataaactcacacaca 48392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 50248157 - 50248116
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  50248157 gtagatagacgaaatggcaaagccattataaactcacacaca 50248116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 51443158 - 51443121
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattat 144  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  51443158 atggatttttaagtgtcaaatggggcgattattattat 51443121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 29803174 - 29803214
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  29803174 tagatagacgaaatggcaaagccattataaactcacacaca 29803214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 36019005 - 36018965
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  36019005 tagatagacgaaatggcaaagccattataaactcacacaca 36018965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 45191561 - 45191601
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  45191561 tagatagacgaaatggcaaagccattataaactcacacaca 45191601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 363 - 642
Target Start/End: Complemental strand, 40888261 - 40887982
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt--aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtca 460  Q
    ||||||||||||||| || ||||||||||| ||||||  |||||||||||| ||||||||||||||| || |||||||| ||||| || |||||||||||    
T  40888261 attattatatgccaattggggcgattcaatggattttttaagtgccaaatggggcgattattattatgtgtcaaatggggcgattatt-attatatgtca 40888163  T
Q  461 aatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtct 560  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| |||||||||    
T  40888162 aatgaggcgattaaaactattatgccaattggggcgatatccggatcatggtctgtttgcatttcatgcatctgcatctccaacattgag-tttgggtct 40888064  T
Q  561 tgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgat 642  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40888063 tgtgtttgttcttatagcatgttttatagtgatcaatattttaaactaaaaagaaattattttagcacaattccttgatgat 40887982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 40888568 - 40888392
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||    
T  40888568 attttgaagtttagtgatgatatgaaattgataattatgtggttcaagagtcagaaaagtttgtaatttatagaaa-agtgcatagcatgcatatcattg 40888470  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| | |||||||    
T  40888469 catttgatggatctttaagtgccaaatggggcgattgttattatttcaatggatttataagtgccaaatgtggcgatt 40888392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 363 - 643
Target Start/End: Original strand, 8655548 - 8655819
Alignment:
Q  363 attattatatgccaaatgcgg-cgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtca 460  Q
    |||||||||||||||||| || ||||| ||| |||||| ||||||||||||||| ||||||||||||||| ||||||||  ||||| |||||||||||||    
T  8655548 attattatatgccaaatggggacgattaaatggatttttaagtgccaaatgaggtgattattattatatgccaaatggggtgattcattattatatgtca 8655647  T
Q  461 aatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtct 560  Q
    |||||||||||||||||||||||| ||||| | | ||||| ||||| |||||||| ||||||||||||         ||||||||||||||||| | |||    
T  8655648 aatggggcgattaaaactattatgtcaatt-gagtgatattcggataatggtctacttgcatttcatg---------catcaacattgagttttcgatct 8655737  T
Q  561 tgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    ||||||||||||||||  || ||||| |||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||    
T  8655738 tgtgtttgttcttatattatattttagagtgataaatattttaaattaaaaagaaatg-ttttagcataattccttgatgatg 8655819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 460 - 643
Target Start/End: Original strand, 29454257 - 29454439
Alignment:
Q  460 aaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtc 559  Q
    |||||||| | |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||    
T  29454257 aaatggggtggttaaaactattatgtcaattggggcgatatgcggatcatggtctatt-gcatttcatgcatttgcatcatcaacattgagtctttggtc 29454355  T
Q  560 ttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||| || | |||||||||||||||||||||||||    
T  29454356 ttgtgtttgttcttatagcatattttagagggatgaatattttaaactaaaaataatttattttagcacaattccttgatgatg 29454439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 418 - 643
Target Start/End: Complemental strand, 52640913 - 52640692
Alignment:
Q  418 ttattattatatgacaaatgggacgattctttattatatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatt 517  Q
    ||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||| | |||||||| ||||    
T  52640913 ttattattatatgccaaatggggcgattcattattatatgtcaattggggcgattaaaaatattatgccaactggggcgatatctgaatcatggtatatt 52640814  T
Q  518 tgcatttcatgcatctgcatcatcaacattgagttttgggtcttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaat 617  Q
    |||||||||||||| ||   ||||||||||||||  || ||||||||||||||||  | | || ||||| |||||||||||||||||| || ||||||||    
T  52640813 tgcatttcatgcatttg---catcaacattgagtcctgagtcttgtgtttgttctagttgtatattttagagtgatgaatattttaaattagaaagaaat 52640717  T
Q  618 gattttagcacaattccttgatgatg 643  Q
    | ||||||||||||||||||||||||    
T  52640716 g-ttttagcacaattccttgatgatg 52640692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 363 - 643
Target Start/End: Complemental strand, 15990038 - 15989760
Alignment:
Q  363 attattatatgccaaatgcggcgatt-caattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtca 460  Q
    |||| ||||||||||||| ||||||| |||| |||||| |||||||||||  ||| |||||||||||||| |||||||| |||||| |||||||||| ||    
T  15990038 attactatatgccaaatggggcgatttcaatggatttttaagtgccaaatagggcaattattattatatgccaaatggggcgattcattattatatgcca 15989939  T
Q  461 aatggggcgatt--aaaactattatgccaattggggcgatatccggatcatggtcta-----tttgcatttcatgcatctgcatcatcaacattgagttt 553  Q
    | ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||      ||||||| ||||||||||   ||||||||||||        
T  15989938 actggggcgattaaaaaactattatgccaactggggcgatatccggatcatggtctacttgcattgcattccatgcatctg---catcaacattga---- 15989846  T
Q  554 tgggtcttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
       ||||||||||||||||| ||| || ||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  15989845 ---gtcttgtgtttgttcttgtagtatattttagagtgatgaatattttaaactataaagaaatg-ttttagcacaattccttgatgatg 15989760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 454 - 643
Target Start/End: Complemental strand, 19544187 - 19544006
Alignment:
Q  454 tatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttt 553  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||   ||| |||||||||| |    
T  19544187 tatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcat-gtctactttcatttcatgcatctg---cattaacattgagtat 19544092  T
Q  554 tgggtcttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||||||||||||||||||||||  ||  |||| |||||||||||||| |||||||||  |||||  |||||||||||||||||||||||    
T  19544091 tgggtcttgtgtttgttcttataatat-atttagagtgatgaatatttaaaactaaaa--aaatg-ctttagcacaattccttgatgatg 19544006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 29453925 - 29454096
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||| ||| |||| ||||||||||||||    
T  29453925 attttgaagtttagtgatcatgtgaaattcataattatgtggtt-aagagtcataaaagtttgtaatttatagaaa-agtacataacatgcatatcattg 29454022  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||||||||||||||| ||||||||| |||   |||||||||||| ||||||||||||||||| |||||||||    
T  29454023 catttgatggatctttaagtgccaaatggggtgat---tattatttcaat-gatttataagtgccaaatggggcgatt 29454096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 472
Target Start/End: Complemental strand, 52640997 - 52640886
Alignment:
Q  363 attattatatgccaaatgcggcgatt-caattgattttaag-tgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtca 460  Q
    |||| |||| |||||||| ||||||| |||| |||||| || ||||||||| || ||||||||||||||| ||||||||||||||  |||||||||| ||    
T  52640997 attactataggccaaatggggcgatttcaatggatttttaggtgccaaatggggtgattattattatatgtcaaatgggacgatttattattatatgcca 52640898  T
Q  461 aatggggcgatt 472  Q
    ||||||||||||    
T  52640897 aatggggcgatt 52640886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 459 - 537
Target Start/End: Complemental strand, 11650014 - 11649936
Alignment:
Q  459 caaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcat 537  Q
    |||||||||||||||| | | ||||||||||||||| |||||| ||||||||||||| || ||||||||||||||||||    
T  11650014 caaatggggcgattaatatttttatgccaattggggtgatatctggatcatggtctagttacatttcatgcatctgcat 11649936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 7131503 - 7131557
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggtat 306  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  7131503 tagatagaagagatggcaaagccatcataaactcacacac-acaaagtggaggtat 7131557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 19544468 - 19544398
Alignment:
Q  74 aaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggcgattaatattat 144  Q
    |||||||| | ||||| |||||||| || |||||||||| || ||||||||||||||||||||| ||||||    
T  19544468 aaagagtggagagcatccatatcatagcgtttgatggattttgaagtgtcaaatggggcgattattattat 19544398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 10051160 - 10051209
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  10051160 tgccaattggggcgatatccggatcatggtcaagttgcatctcatgcatc 10051209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 29454123 - 29454184
Alignment:
Q  115 ttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||| ||||||||||||||| |||||||||||||||||  ||||||||||| | |||||||    
T  29454123 ttaagtgccaaatggggcgattattattatttcaatggatt--taagtgccaaatgaggcgatt 29454184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 229
Target Start/End: Complemental strand, 52641050 - 52640978
Alignment:
Q  158 taagtgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    ||||||||||| | | |||||||||||||||| ||||||||| |||||||||||||| ||||  |||||||||    
T  52641050 taagtgccaaatgagacgattcaatggattttcaagtgccaactggggcgattattactataggccaaatggg 52640978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 52641138 - 52641082
Alignment:
Q  89 tgcatatcattgcatttgatggatctttaagtgtcaaatggggcgattaatattatt 145  Q
    ||||||||||||||||||||| || |||||||||||||| |||| |||| |||||||    
T  52641138 tgcatatcattgcatttgatgaatttttaagtgtcaaattgggcaattattattatt 52641082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 486 - 532
Target Start/End: Complemental strand, 3415608 - 3415562
Alignment:
Q  486 caattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  3415608 caattggagcgatatccggatcatagtctagttgcatttcatgcatc 3415562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 40888244 - 40888199
Alignment:
Q  170 ggggcgattcaatggatttt--aagtgccaaatggggcgattatta 213  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||    
T  40888244 ggggcgattcaatggattttttaagtgccaaatggggcgattatta 40888199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 9013853 - 9013788
Alignment:
Q  145 ttcaatggatttataagtgccaaagggggcgattcaatgga-ttttaagtgccaaatggggcgatt 209  Q
    |||||||||||| |||||| |||| ||||| |||||||||| ||||||||| |||||| |||||||    
T  9013853 ttcaatggatttttaagtgtcaaatggggcaattcaatggatttttaagtgtcaaatgtggcgatt 9013788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 15990029 - 15989960
Alignment:
Q  162 tgccaaagggggcgatt-caatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    ||||||| ||||||||| ||||||||||| ||||||||||| |||| ||||||| ||||| |||||||||    
T  15990029 tgccaaatggggcgatttcaatggatttttaagtgccaaatagggcaattattattatatgccaaatggg 15989960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 19544253 - 19544169
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattatt-atatgacaaatgggacgatt 445  Q
    |||||||||||||||||| || ||||||||  ||||| ||||| ||||||| ||||||||||||  |||| |||||||| |||||    
T  19544253 attattatatgccaaatgaggtgattcaatgaatttttaagtgacaaatgaagcgattattattgttatgtcaaatggggcgatt 19544169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 429
Target Start/End: Original strand, 29454162 - 29454194
Alignment:
Q  397 tttaagtgccaaatgaggcgattattattatat 429  Q
    |||||||||||||||||||||||||||||||||    
T  29454162 tttaagtgccaaatgaggcgattattattatat 29454194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 52640987 - 52640915
Alignment:
Q  163 gccaaagggggcgatt-caatggattttaag-tgccaaatggggcgattattaatatataccaaatgggacga 233  Q
    |||||| ||||||||| ||||||||||| || |||||||||||| |||||||| |||||  ||||||||||||    
T  52640987 gccaaatggggcgatttcaatggatttttaggtgccaaatggggtgattattattatatgtcaaatgggacga 52640915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 2096583 - 2096638
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||| || ||||||||||||| |||||||||||||||   |||||||||||    
T  2096583 gtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggta 2096638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 29212063 - 29212118
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||| || ||||||||||||| |||||||||||||||   |||||||||||    
T  29212063 gtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggta 29212118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 40888365 - 40888302
Alignment:
Q  115 ttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||| ||||| ||||||||| ||||||||||| |||||  ||||||||||| | |||||||    
T  40888365 ttaagtgccaaatagggcgattattattatttcaaaggattcttaagtgccaaatgaggcgatt 40888302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 41464794 - 41464739
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||| || ||||||||||||| |||||||||||||||   |||||||||||    
T  41464794 gtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggta 41464739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 2666340 - 2666298
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  2666340 gtagatagacgaaatggcaaagccattataaactcacacacaa 2666298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 31828527 - 31828485
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||||||||||||||| |||| |||||| |||||||||    
T  31828527 gtagatagaagagatggcaaaaccatcataaacacacacacaa 31828485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 40888323 - 40888281
Alignment:
Q  115 ttaagtgtcaaatggggcgattaatattatttcaatggattta 157  Q
    ||||||| |||||| |||||||| |||||||||||||||||||    
T  40888323 ttaagtgccaaatgaggcgattattattatttcaatggattta 40888281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 51112466 - 51112508
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  51112466 gtagatagacgaaatggcaaagccattataaactcacacacaa 51112508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 52641046 - 52640972
Alignment:
Q  372 tgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgatt 445  Q
    ||||||||| | ||||||||| |||||| ||||||||| || ||||||||||| |||| | |||||||| |||||    
T  52641046 tgccaaatgagacgattcaatggattttcaagtgccaactggggcgattattactataggccaaatggggcgatt 52640972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 1242345 - 1242304
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  1242345 gtagatagacgaaatggcaaagccattataaactcacacaca 1242304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 3440854 - 3440813
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  3440854 gtagatagacgaaatggcaaagccattataaactcacacaca 3440813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 3917894 - 3917853
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  3917894 gtagatagacgaaatggcaaagccattataaactcacacaca 3917853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 4232177 - 4232218
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4232177 gtagatagacgaaatggcaaagccattataaactcacacaca 4232218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 5998782 - 5998823
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  5998782 gtagatagacgaaatggcaaagccattataaactcacacaca 5998823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 8128290 - 8128331
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  8128290 gtagatagacgaaatggcaaagccattataaactcacacaca 8128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 8381207 - 8381166
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  8381207 gtagatagacgaaatggcaaagccattataaactcacacaca 8381166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 8508060 - 8508019
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  8508060 gtagatagacgaaatggcaaagccattataaactcacacaca 8508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 8655565 - 8655626
Alignment:
Q  169 gggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||| ||||| |||||||||| |||||||||||| || |||||||| ||||| |||||||||    
T  8655565 ggggacgattaaatggatttttaagtgccaaatgaggtgattattattatatgccaaatggg 8655626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 9583423 - 9583464
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  9583423 gtagatagacgaaatggcaaagccattataaactcacacaca 9583464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 10229085 - 10229044
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  10229085 gtagatagacgaaatggcaaagccattataaactcacacaca 10229044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 10473914 - 10473955
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  10473914 gtagatagatgaaatggcaaagccattataaactcacacaca 10473955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 11029792 - 11029751
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  11029792 gtagatagacgaaatggcaaagccattataaactcacacaca 11029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 13525297 - 13525256
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  13525297 gtagatagacgaaatggcaaagccattataaactcacacaca 13525256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 13777600 - 13777559
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  13777600 gtagatagacgaaatggcaaagccattataaactcacacaca 13777559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 15003756 - 15003715
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  15003756 gtagatagacgaaatggcaaagccattataaactcacacaca 15003715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 19163762 - 19163721
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  19163762 gtagatagacgaaatggcaaagccattataaactcacacaca 19163721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 24910288 - 24910329
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  24910288 gtagatagacgaaatggcaaagccattataaactcacacaca 24910329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 27396981 - 27396940
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||||||| ||||||||| ||| |||||||||||||||    
T  27396981 gtagatagaagaaatggcaaagtcattataaactcacacaca 27396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 28170979 - 28171020
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  28170979 gtagatagacgaaatggcaaagccattataaactcacacaca 28171020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 178
Target Start/End: Original strand, 29454099 - 29454144
Alignment:
Q  133 gattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||| |||||||||||||||||  ||||||||||| |||||||||    
T  29454099 gattattattatttcaatggattcttaagtgccaaatggggcgatt 29454144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 29454111 - 29454148
Alignment:
Q  177 ttcaatggatt-ttaagtgccaaatggggcgattatta 213  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  29454111 ttcaatggattcttaagtgccaaatggggcgattatta 29454148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 32960978 - 32961019
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  32960978 gtagatagacgaaatggcaaagccattataaactcacacaca 32961019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 34397808 - 34397767
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  34397808 gtagatagacgaaatggcaaagccattataaactcacacaca 34397767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 38127842 - 38127883
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  38127842 gtagatagacgaaatggcaaagccattataaactcacacaca 38127883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 38485959 - 38486000
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  38485959 gtagatagacgaaatggcaaagccattataaactcacacaca 38486000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 427
Target Start/End: Complemental strand, 40888323 - 40888294
Alignment:
Q  398 ttaagtgccaaatgaggcgattattattat 427  Q
    ||||||||||||||||||||||||||||||    
T  40888323 ttaagtgccaaatgaggcgattattattat 40888294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 47410752 - 47410793
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  47410752 gtagatagacgaaatggcaaagccattataaactcacacaca 47410793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 48555964 - 48555923
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  48555964 gtagatagacgaaatggcaaagccattataaactcacacaca 48555923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 7552722 - 7552682
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  7552722 tagatagacgaaatggcaaagccattataaactcacacaca 7552682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 11076532 - 11076492
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  11076532 tagatagacgaaatggcaaagccattataaactcacacaca 11076492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 17501054 - 17501014
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  17501054 tagatagacgaaatggcaaagccattataaactcacacaca 17501014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 34481793 - 34481833
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  34481793 tagatagacgaaatggcaaagccattataaactcacacaca 34481833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 37312655 - 37312615
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  37312655 tagatagacgaaatggcaaagccattataaactcacacaca 37312615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 53669712 - 53669752
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  53669712 tagatagatgaaatggcaaagccattataaactcacacaca 53669752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 54097442 - 54097482
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  54097442 tagatagacgaaatggcaaagccattataaactcacacaca 54097482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 182; Significance: 5e-98; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 363 - 643
Target Start/End: Complemental strand, 10335702 - 10335421
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||| |||||| ||||||||||| |||||| |||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||| |||    
T  10335702 attattatatgtcaaatggggcgattcaatggatttttaagtgccaaatggggcgattattattatatgccaaatggggcaattctttattatatgccaa 10335603  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
    |||||| ||||||||||||||||  | ||||||||||||| | |||||||||| ||| |||||||| ||| ||||||||||||||||||| || ||||||    
T  10335602 atggggtgattaaaactattatgaaagttggggcgatatctgaatcatggtctgtttacatttcatacatttgcatcatcaacattgagtctttggtctt 10335503  T
Q  562 gtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10335502 gtgtttgttcttatagcatattttagagtgatgaatattttaaactaaaaagaaattattttagcacaattccttgatgatg 10335421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 363 - 606
Target Start/End: Complemental strand, 41942722 - 41942478
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||||||||||  | |||||||| |||||| |||||||||| ||||||||||||||||| || |||||||||||||| || |||||||| |||    
T  41942722 attattatatgccaaatggagtgattcaatggatttttaagtgccaaacgaggcgattattattatgtgccaaatgggacgattatt-attatatgccaa 41942624  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| || ||||||    
T  41942623 atggggcgattaaaactattatgccaattgaggcgatatccggatcatggtctgtttgcatttcatgcatttgcatcatcaacattgagtgtttggtctt 41942524  T
Q  562 gtgtttgttcttat-agcatgttttatagtgatgaatattttaaac 606  Q
     ||||||||||||| ||||| ||||| |||||  ||||||||||||    
T  41942523 ctgtttgttcttataagcatattttagagtgacaaatattttaaac 41942478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 448 - 643
Target Start/End: Complemental strand, 41951659 - 41951463
Alignment:
Q  448 ttattatatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacatt 547  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  41951659 ttattatatgccaaatggggcgattaaaactattatgccaattgagacgatatccgaatcatggtctgtttgcatttcatgcatttgcatcatcaacatt 41951560  T
Q  548 gagttttgggtcttgtgtttgttcttat-agcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||| || |||||||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41951559 gagtctttggtcttgtgtttgttcttataagcatattttagagtgacgaatattttaaactaaaaagaaattattttagcacaattccttgatgatg 41951463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 396 - 617
Target Start/End: Complemental strand, 18286334 - 18286116
Alignment:
Q  396 ttttaagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaaatggggcgattaaaactattatgccaattggggc 495  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||    
T  18286334 ttttaagtgccaaatggggcgattattattatatgccaaatggggcgattctttattatatgccaaaaggggcgattaaaactattatgtcaattggggc 18286235  T
Q  496 gatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtcttgtgtttgttcttatagcatgttttatagtgatga 595  Q
    ||||||||||||||| ||||||||||||| |||||| ||   |||||||||||||| | | ||||||||||||||||| ||| || ||||| ||||||||    
T  18286234 gatatccggatcatgctctatttgcattttatgcatttg---catcaacattgagtctcgagtcttgtgtttgttcttgtagtatattttagagtgatga 18286138  T
Q  596 atattttaaactaaaaagaaat 617  Q
    |||||||||| |||||||||||    
T  18286137 atattttaaattaaaaagaaat 18286116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 10335931 - 10335787
Alignment:
Q  33 aattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggc 132  Q
    |||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||     
T  10335931 aattatgtggttcaagagtccgaaaagtttgtaatttatagaaa-agtgcataacatgcatatcattgcatttgatggatctttaagtgccaaatgggga 10335833  T
Q  133 gattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||  ||||||||||||||| | ||||||||||| | |||||||    
T  10335832 gattaccattatttcaatggatctctaagtgccaaatgaggcgatt 10335787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 41942866 - 41942723
Alignment:
Q  33 aattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggc 132  Q
    |||||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  41942866 aattatgtggtt-aagagtccgaaaagtttgtaatttatagaaa-agtgcatagcatgcatattattgcatttgatggatctttaagtgccaaatggggc 41942769  T
Q  133 gattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||  ||||||||||||||||| |||||||||||  ||||||||    
T  41942768 gattatcattatttcaatggatttctaagtgccaaattgggcgatt 41942723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 18286507 - 18286411
Alignment:
Q  82 catagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||| || |||||| |||| |||||||||    
T  18286507 catagcatgcatatcattgcatttgatggattattaagtgacaaatggggcgattattattatttcaatggaattttaagtgtcaaatggggcgatt 18286411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 432 - 535
Target Start/End: Complemental strand, 31518649 - 31518544
Alignment:
Q  432 caaatgggacgattctttattatatgtcaaatggggcgattaaaa--ctattatgccaattggggcgatatccggatcatggtctatttgcatttcatgc 529  Q
    |||||||| |||||| ||||| |||| ||| ||||||||||||||  | |||||||||| | |||||||||||||||||||||||| |||||||||||||    
T  31518649 caaatggggcgattcattattgtatgccaactggggcgattaaaaaacaattatgccaactagggcgatatccggatcatggtctacttgcatttcatgc 31518550  T
Q  530 atctgc 535  Q
    ||||||    
T  31518549 atctgc 31518544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 107 - 229
Target Start/End: Complemental strand, 10335816 - 10335683
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcga----------ttcaatggattt-taagtgc 195  Q
    |||||||| |||||| |||||| |||||||| |||||||||||||||||||||| ||||||| |||||||          |||||||||||| ||||||     
T  10335816 atggatctctaagtgccaaatgaggcgattattattatttcaatggatttataaatgccaaatggggcgatttttattatttcaatggatttataagtgt 10335717  T
Q  196 caaatggggcgattattaatatataccaaatggg 229  Q
    |||||||||||||||||| |||||  ||||||||    
T  10335716 caaatggggcgattattattatatgtcaaatggg 10335683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 31518754 - 31518675
Alignment:
Q  149 atggatttataagtgccaaagggggcgattcaatggattttaagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||||||| ||||||||||| ||| ||||||||||||||| ||||||||||| |||||||||||| ||||| |||||||||    
T  31518754 atggatttttaagtgccaaatggg-cgattcaatggatttcaagtgccaaatagggcgattattactatatgccaaatggg 31518675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 18286382 - 18286311
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||| |||||||| |||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||    
T  18286382 atggatttttaagtgccaaatgggtcgattattattatttcaatggatttttaagtgccaaatggggcgatt 18286311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 10335690 - 10335625
Alignment:
Q  165 caaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  10335690 caaatggggcgattcaatggatttttaagtgccaaatggggcgattattattatatgccaaatggg 10335625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 18286344 - 18286291
Alignment:
Q  177 ttcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  18286344 ttcaatggatttttaagtgccaaatggggcgattattattatatgccaaatggg 18286291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 18286406 - 18286345
Alignment:
Q  367 ttatatgccaaatgcggcgattcaattga-ttttaagtgccaaatgaggcgattattattat 427  Q
    |||||||||||||| ||||||||||| || |||||||||||||||| | |||||||||||||    
T  18286406 ttatatgccaaatggggcgattcaatggatttttaagtgccaaatgggtcgattattattat 18286345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 31518741 - 31518669
Alignment:
Q  372 tgccaaatgcggcgattcaattgattttaagtgccaaatgaggcgattattattatatgacaaatgggacgatt 445  Q
    ||||||||| ||||||||||| ||||| |||||||||||  ||||||||||| |||||| |||||||| |||||    
T  31518741 tgccaaatg-ggcgattcaatggatttcaagtgccaaatagggcgattattactatatgccaaatggggcgatt 31518669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 37759558 - 37759506
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggagg 303  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  37759558 gtagatagaagagatgacaaagccatcataaactcacacac-acaaagtggagg 37759506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 50981729 - 50981781
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggagg 303  Q
    |||||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  50981729 gtagatagaagagatgtcaaagccatcataaactcacacac-acaaagtggagg 50981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 18286401 - 18286349
Alignment:
Q  162 tgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattatta 213  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||||||||    
T  18286401 tgccaaatggggcgattcaatggatttttaagtgccaaatgggtcgattatta 18286349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 28758506 - 28758452
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||||    
T  28758506 gtagatagaagagattgcaaagtcattataaactcacacac-acaaagtggaggta 28758452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 10335736 - 10335676
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    |||||| ||||| |||||| |||||| |||||||||||||||||| |||||||| ||||||    
T  10335736 ttcaatggatttataagtgtcaaatggggcgattattattatatgtcaaatggggcgattc 10335676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 41942713 - 41942641
Alignment:
Q  162 tgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatgggacga 233  Q
    ||||||| || | ||||||||||||||| |||||||||| | ||||||||||| ||| | |||||||||||||    
T  41942713 tgccaaatggagtgattcaatggatttttaagtgccaaacgaggcgattattattatgtgccaaatgggacga 41942641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 41942756 - 41942704
Alignment:
Q  177 ttcaatggattt-taagtgccaaatggggcgattattaatatataccaaatgg 228  Q
    |||||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  41942756 ttcaatggatttctaagtgccaaattgggcgattattattatatgccaaatgg 41942704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 32057723 - 32057777
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||| |||||| |||| |||| |||||||||||||| ||||||||||||||    
T  32057723 gtagatagacgagatgacaaaaccatcataaactcacacac-acaaagtggaggta 32057777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 12821291 - 12821249
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  12821291 gtagatagacgaaatggcaaagccattataaactcacacacaa 12821249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 25698939 - 25698993
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    |||||||| || ||||||||||||| |||||||||||||||   |||||||||||    
T  25698939 tagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggta 25698993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 31518848 - 31518789
Alignment:
Q  158 taagtgccaaagggggcgattcaatggatt----ttaagtgccaaatggggcgattatta 213  Q
    ||||||||||| ||||||||||| ||||||    ||||||| ||||||||||||||||||    
T  31518848 taagtgccaaatggggcgattcagtggattatttttaagtgtcaaatggggcgattatta 31518789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 4379432 - 4379391
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    |||||||| || ||||||||||||| ||||||||||||||||    
T  4379432 tagatagacgaaatggcaaagccattataaactcacacacaa 4379391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 5333206 - 5333247
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  5333206 gtagatagacgaaatggcaaagccattataaactcacacaca 5333247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 6487974 - 6487933
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  6487974 gtagatagacgaaatggcaaagccattataaactcacacaca 6487933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 7512895 - 7512854
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  7512895 gtagatagacgaaatggcaaagccattataaactcacacaca 7512854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 7944224 - 7944265
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  7944224 gtagatagatgaaatggcaaagccattataaactcacacaca 7944265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 12315930 - 12315971
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  12315930 gtagatagatgaaatggcaaagccattataaactcacacaca 12315971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 13389148 - 13389107
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  13389148 gtagatagacgaaatggcaaagccattataaactcacacaca 13389107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 14285223 - 14285182
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  14285223 gtagatagatgaaatggcaaagccattataaactcacacaca 14285182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 16476937 - 16476978
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  16476937 gtagatagacgaaatggcaaagccattataaactcacacaca 16476978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 18813498 - 18813457
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  18813498 gtagatagacgaaatggcaaagccattataaactcacacaca 18813457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 23974642 - 23974683
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  23974642 gtagatagacgaaatggcaaagccattataaactcacacaca 23974683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 24712216 - 24712175
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  24712216 gtagatagacgaaatggcaaagccattataaactcacacaca 24712175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 25003860 - 25003819
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  25003860 gtagatagacgaaatggcaaagccattataaactcacacaca 25003819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 28010051 - 28010092
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  28010051 gtagatagatgaaatggcaaagccattataaactcacacaca 28010092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 30044584 - 30044625
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  30044584 gtagatagacgaaatggcaaagccattataaactcacacaca 30044625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 31263501 - 31263542
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  31263501 gtagatagacgaaatggcaaagccattataaactcacacaca 31263542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 31518888 - 31518828
Alignment:
Q  75 aagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggcgatt 136  Q
    |||| |||||| ||| |||||||||||||||| |||||  ||||||| ||||||||||||||    
T  31518888 aagattgcataacatacatatcattgcatttg-tggattattaagtgccaaatggggcgatt 31518828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 32104010 - 32104051
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  32104010 gtagatagatgaaatggcaaagccattataaactcacacaca 32104051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 33416580 - 33416621
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  33416580 gtagatagacgaaatggcaaagccattataaactcacacaca 33416621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 36526141 - 36526182
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36526141 gtagatagacgaaatggcaaagccattataaactcacacaca 36526182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 36860849 - 36860890
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36860849 gtagatagacgaaatggcaaagccattataaactcacacaca 36860890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 37050829 - 37050788
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  37050829 gtagatagacgaaatggcaaagccattataaactcacacaca 37050788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 37166266 - 37166225
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  37166266 gtagatagacgaaatggcaaagccattataaactcacacaca 37166225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 42856691 - 42856650
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  42856691 gtagatagacgaaatggcaaagccattataaactcacacaca 42856650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 46488117 - 46488158
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  46488117 gtagatagacgaaatggcaaagccattataaactcacacaca 46488158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 49882709 - 49882750
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  49882709 gtagatagacgaaatggcaaagccattataaactcacacaca 49882750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 50779791 - 50779832
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  50779791 gtagatagacgaaatggcaaagccattataaactcacacaca 50779832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 51578967 - 51579004
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcaca 287  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  51578967 gtagatagaagacatggcaaagccatcataaactcaca 51579004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 579243 - 579283
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  579243 tagatagacgaaatggcaaagccattataaactcacacaca 579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 9569602 - 9569562
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  9569602 tagatagacgaaatggcaaagccattataaactcacacaca 9569562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 427
Target Start/End: Complemental strand, 10335807 - 10335779
Alignment:
Q  399 taagtgccaaatgaggcgattattattat 427  Q
    |||||||||||||||||||||||||||||    
T  10335807 taagtgccaaatgaggcgattattattat 10335779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 13632217 - 13632177
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  13632217 tagatagacgaaatggcaaagccattataaactcacacaca 13632177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 24550940 - 24550900
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  24550940 tagatagacgaaatggcaaagccattataaactcacacaca 24550900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 24870726 - 24870686
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacac 290  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  24870726 gtagataaacgagatggcaaagccatcataaactcacacac 24870686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 31583604 - 31583644
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  31583604 tagatagacgaaatggcaaagccattataaactcacacaca 31583644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 34567154 - 34567114
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  34567154 tagatagacgaaatggcaaagccattataaactcacacaca 34567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 34684329 - 34684289
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  34684329 tagatagacgaaatggcaaagccattataaactcacacaca 34684289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 438
Target Start/End: Complemental strand, 41942756 - 41942704
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgg 438  Q
    |||||| ||||| ||||||||||||  |||||||||||||||||| |||||||    
T  41942756 ttcaatggatttctaagtgccaaattgggcgattattattatatgccaaatgg 41942704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 42411989 - 42412029
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  42411989 tagatagacgaaatggcaaagccattataaactcacacaca 42412029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 48628465 - 48628505
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  48628465 tagatagacgaaatggcaaagccattataaactcacacaca 48628505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 179; Significance: 3e-96; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 363 - 643
Target Start/End: Complemental strand, 21231508 - 21231226
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||||||| || ||||||||||| |||||| |||||||||||| |||||||||||| ||||| |||||| |  |||| ||||||||||| |||    
T  21231508 attattatatgccaattggggcgattcaatggatttttaagtgccaaatggggcgattattatcatatgccaaatgaggtgattttttattatatgccaa 21231409  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||  || ||||||    
T  21231408 atgggacgattaaaactattatgccaattggggcgatatccggatcatgatctatttgcatttcatggatttgcatcatcaacattgaggctttggtctt 21231309  T
Q  562 gtgtttgttcttatagcatgttttatagtgatgaatattttaaacta-aaaagaaatgattttagcacaattccttgatgatg 643  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  21231308 gtgttagttcttatagcatattttagagtgatgaatattttaaactaaaaaagaaattattttagcacaattccttgatgatg 21231226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 405 - 643
Target Start/End: Original strand, 9884291 - 9884525
Alignment:
Q  405 ccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaaatggggcgattaaaactattatgccaattggggcgatatccgg 504  Q
    ||||||| |||||||||||||||||| ||||| || |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9884291 ccaaatggggcgattattattatatgccaaattgggcgattccttattatatgtcaaatgggacgattaaaactattatgccaattggggcgatatccgg 9884390  T
Q  505 atcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtcttgtgtttgttcttatagcatgttttatagtgatgaatattttaa 604  Q
    ||||||||||||||||||||||||||||||   |||||||||||||| |||||| ||||| |||||||||||| || |||||  |||||||||||||| |    
T  9884391 atcatggtctatttgcatttcatgcatctg---catcaacattgagtcttgggttttgtgcttgttcttatagtatattttagtgtgatgaatattttga 9884487  T
Q  605 actaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  9884488 actaaaaagaaatg-ttttagcacaattccttgatgatg 9884525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 413 - 643
Target Start/End: Complemental strand, 9817812 - 9817586
Alignment:
Q  413 ggcgattattattatatgacaaatgggacgattctttattatatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggt 512  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  9817812 ggcgattattattatatgccaaatggggcgattctttattatatgccaaatggggcgattaaaactattatgtcaattggggcgatatccggatcatgat 9817713  T
Q  513 ctatttgcatttcatgcatctgcatcatcaacattgagttttgggtcttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaa 612  Q
    |||||||||||||||||||||||   ||||||||||| | ||| |||||||||||||||||||   || ||||| ||||||||||||||| |||||||||    
T  9817712 ctatttgcatttcatgcatctgc---atcaacattgaatcttgagtcttgtgtttgttcttatgttatattttaaagtgatgaatattttgaactaaaaa 9817616  T
Q  613 gaaatgattttagcacaattccttgatgatg 643  Q
    |||||| ||||||||||||||||||||||||    
T  9817615 gaaatg-ttttagcacaattccttgatgatg 9817586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 448 - 643
Target Start/End: Complemental strand, 42077074 - 42076878
Alignment:
Q  448 ttattatatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacatt 547  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  42077074 ttattatatgccaaatgggacgattaaaactattatgccaattggggcgatatccggatcatggtctgtttgcatttcatgcatttgcatcatcaacatt 42076975  T
Q  548 gagttttgggtcttgtgtttgttcttat-agcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||| || |||||||||||||||||||| ||||| ||||| |||||  ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  42076974 gagtctttggtcttgtgtttgttcttataagcatattttagagtgacaaatattttaaactaaaaagaaattattatagcacaattccttgatgatg 42076878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 21231727 - 21231489
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    ||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21231727 attttgaagtacagtgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 21231628  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcga----------ttcaatggattt-t 189  Q
    |||||||||||| |||||||| ||||||||| |||||  ||||||||||||||||| ||||||||||| |||||||          || ||||||||| |    
T  21231627 catttgatggat-tttaagtgccaaatggggtgattatcattatttcaatggatttctaagtgccaaatggggcgattattattattttaatggatttat 21231529  T
Q  190 aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||||||||||||||||||||||| ||||| |||| ||||    
T  21231528 aagtgccaaatggggcgattattattatatgccaattggg 21231489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 9818067 - 9817891
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  9818067 attttgaagtttagtgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtaatttatagaaa-agtgcatagcatgcatatcattg 9817969  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||| || || |||||||||||  ||||||||    
T  9817968 catttgatggatctttaagtgccaaatggggcgattatcattatttcaatagaattctaagtgccaaatagggcgatt 9817891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 42077309 - 42077116
Alignment:
Q  44 tcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggcgattaatatta 143  Q
    ||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||||| ||||  ||||    
T  42077309 tcaagagtccgaaaagtttgtaatttatagaaa-agtgcataacatgcatatcattgtatttgatggatctttaagtgccaaatggggccattataatta 42077211  T
Q  144 tttcaatggatttataagtgccaaagggggcga----------ttcaatggattt-taagtgccaaatggggcgattattaatatataccaaatg 227  Q
    ||||||||||||| ||||||||||| |||||||          |||||||||||| |||||| |||||||||||||||| | ||||| |||||||    
T  42077210 tttcaatggatttctaagtgccaaatggggcgattattattatttcaatggatttataagtgtcaaatggggcgattataattatatgccaaatg 42077116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 366 - 445
Target Start/End: Complemental strand, 42077130 - 42077050
Alignment:
Q  366 attatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgatt 445  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||||| |||||||||||||||||| ||||||||||||||    
T  42077130 attatatgccaaatgaggcgattcaatggatttttaagtgccaaatggggcgattattattatatgccaaatgggacgatt 42077050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 42077124 - 42077052
Alignment:
Q  162 tgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatgggacga 233  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||    
T  42077124 tgccaaatgaggcgattcaatggatttttaagtgccaaatggggcgattattattatatgccaaatgggacga 42077052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 454 - 537
Target Start/End: Original strand, 24423750 - 24423833
Alignment:
Q  454 tatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcat 537  Q
    |||| ||||||||| |||||| | | ||||||||| ||||||||||||||||||||||| || ||||||||||||| |||||||    
T  24423750 tatgccaaatggggtgattaatattgttatgccaaatggggcgatatccggatcatggtatagttgcatttcatgcctctgcat 24423833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 9817878 - 9817806
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaa-gggggcgatt 178  Q
    |||||| | |||||||||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||    
T  9817878 atggatttataagtgtcaaatggggcgattattattatttcaatgaatttataagtgtcaaatgggggcgatt 9817806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 9817911 - 9817849
Alignment:
Q  116 taagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||| ||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  9817911 taagtgccaaatagggcgattattattatttcaatggatttataagtgtcaaatggggcgatt 9817849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 459 - 515
Target Start/End: Complemental strand, 29115190 - 29115134
Alignment:
Q  459 caaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtcta 515  Q
    ||||||||  |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  29115190 caaatgggatgattaaaattattatgtcaattggggcgatatccggatcatggtcta 29115134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 9881413 - 9881475
Alignment:
Q  82 catagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggcgattaatattat 144  Q
    |||||||||||||| ||||||||||||||||  ||||||| ||| ||||||||||| ||||||    
T  9881413 catagcatgcatattattgcatttgatggattattaagtgccaattggggcgattattattat 9881475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 21231491 - 21231433
Alignment:
Q  170 ggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatg 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  |||| |||||||    
T  21231491 ggggcgattcaatggatttttaagtgccaaatggggcgattattatcatatgccaaatg 21231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 24499484 - 24499435
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  24499484 tgccaattggggcgatatccggatcatggtcaagttgcatctcatgcatc 24499435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 35738899 - 35738847
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaacaaagtggagg 303  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||||||||    
T  35738899 tagatagaagagatggcaaagccaccataaattcacacacaataaagtggagg 35738847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 37820895 - 37820950
Alignment:
Q  252 agatagaagagatggcaaagccataataaactcacacacaacaaagtggaggtatga 308  Q
    |||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||    
T  37820895 agatagaagagatgacaaaaccatcataaactcacacac-acaaagtggaggtatga 37820950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 8525201 - 8525242
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  8525201 gtagatagatgaaatggcaaagccataataaactcacacaca 8525242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 24197827 - 24197882
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggtat 306  Q
    |||||||||||||||| |||| |||| |||||||||||||| | |||||||||||||    
T  24197827 gtagatagaagagatgacaaaaccatcataaactcacacac-ataaagtggaggtat 24197882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 446
Target Start/End: Complemental strand, 21231529 - 21231482
Alignment:
Q  399 taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    ||||||||||||| |||||||||||||||||| ||| |||| ||||||    
T  21231529 taagtgccaaatggggcgattattattatatgccaattggggcgattc 21231482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 33540281 - 33540242
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacaca 289  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  33540281 gtagatagacgagatggcaaagccatcataaactcacaca 33540242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 2442888 - 2442846
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  2442888 gtagatagacgaaatggcaaagccattataaactcacacacaa 2442846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 13403419 - 13403461
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||    
T  13403419 gtagatagaagagatggaaaaaccatcataaactcacacacaa 13403461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 16501775 - 16501733
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  16501775 gtagatagacgaaatggcaaagccattataaactcacacacaa 16501733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 4312261 - 4312220
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4312261 gtagatagacgaaatggcaaagccattataaactcacacaca 4312220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 4430735 - 4430776
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4430735 gtagatagacgaaatggcaaagccattataaactcacacaca 4430776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 4977034 - 4977075
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4977034 gtagatagacgaaatggcaaagccattataaactcacacaca 4977075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 6317428 - 6317387
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  6317428 gtagatagacgaaatggcaaagccattataaactcacacaca 6317387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 10096740 - 10096699
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  10096740 gtagatagacgaaatggcaaagccattataaactcacacaca 10096699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 14243827 - 14243786
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  14243827 gtagatagacgaaatggcaaagccattataaactcacacaca 14243786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 23681138 - 23681097
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  23681138 gtagatagacgaaatggcaaagccattataaactcacacaca 23681097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 24655102 - 24655061
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  24655102 gtagatagacgaaatggcaaagccattataaactcacacaca 24655061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 25063468 - 25063427
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  25063468 gtagatagacgaaatggcaaagccattataaactcacacaca 25063427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 25199174 - 25199133
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  25199174 gtagatagacgaaatggcaaagccattataaactcacacaca 25199133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 26675685 - 26675644
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  26675685 gtagatagacgaaatggcaaagccattataaactcacacaca 26675644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 26690822 - 26690781
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  26690822 gtagatagacgaaatggcaaagccattataaactcacacaca 26690781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 27817449 - 27817490
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  27817449 gtagatagacgaaatggcaaagccattataaactcacacaca 27817490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 27849743 - 27849784
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  27849743 gtagatagacgaaatggcaaagccattataaactcacacaca 27849784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 29158930 - 29158889
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    |||||||| || ||||||||||||| ||||||||||||||||    
T  29158930 tagatagacgaaatggcaaagccattataaactcacacacaa 29158889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 34540064 - 34540105
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  34540064 gtagatagacgaaatggcaaagccattataaactcacacaca 34540105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 34711555 - 34711596
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  34711555 gtagatagacgaaatggcaaagccattataaactcacacaca 34711596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 38953480 - 38953521
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  38953480 gtagatagacgaaatggcaaagccattataaactcacacaca 38953521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 40772565 - 40772606
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  40772565 gtagatagacgaaatggcaaagccattataaactcacacaca 40772606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 44814991 - 44814950
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  44814991 gtagatagatgaaatggcaaagccattataaactcacacaca 44814950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 27928285 - 27928245
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  27928285 tagatagacgaaatggcaaagccattataaactcacacaca 27928245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 38070482 - 38070522
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  38070482 tagatagacgaaatggcaaagccattataaactcacacaca 38070522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 174; Significance: 3e-93; HSPs: 7)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 375 - 643
Target Start/End: Original strand, 2534 - 2802
Alignment:
Q  375 caaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaaatggggcgatta 473  Q
    |||||| ||||||||||| |||||| ||||| |||||| |||||||||||||||||| |||||||| ||||||||||||||| | ||||||||| |||||    
T  2534 caaatggggcgattcaatggatttttaagtgtcaaatggggcgattattattatatgccaaatggggcgattctttattatacgccaaatggggtgatta 2633  T
Q  474 aaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtcttgtgtttgttctt 573  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  2634 aaactattatgtcaattggggcgatatccggatcatggtctatttgcatttcatgcatttgcatcatcaacattgagtctttggtcttgtgtttgttctt 2733  T
Q  574 atagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    || | || ||||| ||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||    
T  2734 atggtatattttaaagtgatgaatattttgaactaaaaagaaatg-ttttaacacaattcattgatgatg 2802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 2299 - 2476
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2299 attttgaagtatagtgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaatagtgcatatcatgcatatcattg 2398  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||||||||||||||  |||||||||||||||  ||||||||| ||||||| |||||| |||| |||||||||    
T  2399 catttgatggatctttaagtaccaaatggggcgattatcattatttcattggatttctaagtgtcaaatggggcgatt 2476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 2527 - 2599
Alignment:
Q  158 taagtgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||||| |||| |||||||||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||    
T  2527 taagtgtcaaatggggcgattcaatggatttttaagtgtcaaatggggcgattattattatatgccaaatggg 2599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 2456 - 2521
Alignment:
Q  116 taagtgtcaaatggggcgattaatatt---atttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||||||||||||||||||| ||||   |||||||||||||||||||||||||| |||||||||    
T  2456 taagtgtcaaatggggcgattattattattatttcaatggatttataagtgccaaatggggcgatt 2521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 2488 - 2525
Alignment:
Q  177 ttcaatggattt-taagtgccaaatggggcgattatta 213  Q
    |||||||||||| |||||||||||||||||||||||||    
T  2488 ttcaatggatttataagtgccaaatggggcgattatta 2525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 2550 - 2587
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattat 144  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  2550 atggatttttaagtgtcaaatggggcgattattattat 2587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 2488 - 2548
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    |||||| ||||| ||||||||||||| ||||||||||||||  || |||||||| ||||||    
T  2488 ttcaatggatttataagtgccaaatggggcgattattattaagtgtcaaatggggcgattc 2548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 172; Significance: 4e-92; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 363 - 642
Target Start/End: Original strand, 8312238 - 8312520
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||| |||||| |  ||||||||  ||||| ||||||  ||| |||  |||||||||||||| |||||||||||||||||||||||||| |||    
T  8312238 attattatatgtcaaatgggatgattcaatgaatttttaagtgcggaataaggtaattattattatatgtcaaatgggacgattctttattatatgccaa 8312337  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
    ||| || |||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||    
T  8312338 atgtggtgattaaaactcttatgccaattggggagatatccgaatcatggtctatttacatttaatgcatctgcatcatcaacattgagtcttgggtctt 8312437  T
Q  562 gtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcac--aattccttgatgat 642  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  8312438 gtgtttgttcttatagcatattttagagtgatgaatattttaaactaaaaagaaatgattttagcacataattccttgatgat 8312520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 363 - 643
Target Start/End: Original strand, 9745708 - 9745988
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattga-ttttaagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    |||||| |||||||| || ||||||||||| || ||||||||| |||||| | |||||||||| |||||  ||||||| |||||||||| |||||| |||    
T  9745708 attattgtatgccaattggggcgattcaatggaattttaagtgtcaaatgggacgattattatcatatgctaaatggggcgattctttagtatatgccaa 9745807  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcat---catcaacattgagttttgggt 558  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||    
T  9745808 atggggcgattaaaactattatgtcaattgaggcgatatccagatcatggtctatttgcatttcatgcatctgcatctacatcaacattgagtcttgggt 9745907  T
Q  559 cttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    ||||||||||||||||||  || ||||| |||||||||  |||| ||||  ||||||||| ||||| ||||||||||||||||||    
T  9745908 cttgtgtttgttcttataatatattttagagtgatgaa-cttttgaact--aaagaaatg-ttttaacacaattccttgatgatg 9745988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 9745401 - 9745577
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| |||| ||||||||||||||    
T  9745401 attttgaagtttagtgatgatgtgaaattcataattatgtggttcaagagtcagaaaagtttgtaatttatagaaa-agtacataacatgcatatcattg 9745499  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  9745500 catttgatggatctttaagtggcaaatggggcgattattattatttcaatggatttataagtgccaaatggggcgatt 9745577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 448 - 643
Target Start/End: Original strand, 13169993 - 13170187
Alignment:
Q  448 ttattatatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacatt 547  Q
    |||||||||| ||||||||||||||     |  |||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||    
T  13169993 ttattatatgccaaatggggcgattctttattatatgccaaatggggcgatatccggatcacagtctattagcatttcatgcatctgcatcatcaacatt 13170092  T
Q  548 gagttttgggtcttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||| ||| ||||||||||||||||| ||| || ||||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||| ||||    
T  13170093 gagtattgagtcttgtgtttgttcttgtagtatattttagagtgatgaattttttaaattaaaaagaaatg-ttttagcacaattccttgacgatg 13170187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 8312033 - 8312258
Alignment:
Q  15 tgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatct 114  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||| |||| ||||| |||| |||| ||||||||||||||||||||  ||| |    
T  8312033 tgataatgtgaaattcataattatgtggttcaagagttagaaaagtttgtaatttacagaaa-agtgtatagtatgcatatcattgcatttgacagattt 8312131  T
Q  115 ttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcga----------ttcaatggattt-taagtgccaaatggg 203  Q
     |||||||||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||          |||||||||||| |||||| ||||||||    
T  8312132 ataagtgtcaaatggggtgattattattatttcaatgaatttataagtgccaaatggggcgattattattatttcaatggatttataagtgtcaaatggg 8312231  T
Q  204 gcgattattaatatataccaaatggga 230  Q
    |||||||||| |||||  |||||||||    
T  8312232 gcgattattattatatgtcaaatggga 8312258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 17855212 - 17855378
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||| |||||||| | |||||||||||||||            
T  17855212 attttgaagtttaatgatgatgtgaaattcataattatatggttcaagaattagaaaagtttgtaatttatagaga-agtgcatagcatgca-------- 17855302  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
      ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||    
T  17855303 --tttgatggatctttaagtgccaaatggggcgattattattatttcaatagatttataagtgccaaatggggcgatt 17855378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 33 - 178
Target Start/End: Complemental strand, 10529374 - 10529230
Alignment:
Q  33 aattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggc 132  Q
    |||||||||||||||||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||  |||||||||    
T  10529374 aattatgtggttcaagagtccgaaaagtttgtaatttatagaaa-agtgcattgcatgcatatcattgcatttgatggatctttgagtgctaaatggggc 10529276  T
Q  133 gattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||  ||||||||||||||||| | ||||||||| |||||||||    
T  10529275 gattatcattatttcaatggatttctgagtgccaaatggggcgatt 10529230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 13169773 - 13169933
Alignment:
Q  20 atgtgaaattcat-aattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaa 118  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13169773 atgtgaaattcattaattatgtggttcaagagtcataaaagtttgtaatttatagaaa-agtgcatagcatgcatatcattgcatttgatggatctttaa 13169871  T
Q  119 gtgtcaaatggggc---gattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||  |||||||||    |||| ||||||||||||||| |||||||||||||| |||||||||    
T  13169872 gtgcaaaatggggctattattattattatttcaatgga-ttataagtgccaaatggggcgatt 13169933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 366 - 471
Target Start/End: Original strand, 13169937 - 13170043
Alignment:
Q  366 attatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaaatg 464  Q
    ||||||||||||||| || |||||||| |||||| |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| ||||||    
T  13169937 attatatgccaaatggggtgattcaatggatttttaagtgccaaatggggcgattattattatatgccaaatggggcgattctttattatatgccaaatg 13170036  T
Q  465 gggcgat 471  Q
    |||||||    
T  13170037 gggcgat 13170043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 65 - 177
Target Start/End: Original strand, 29587808 - 29587918
Alignment:
Q  65 agtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgc 164  Q
    |||||||||||| |||||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||||| |||| ||| |||||||||||||||||    
T  29587808 agtttatagaaa-agtgcatagcatgcatataattgcatttgaaggat-tttaagtgccaaatggggcgattattattgttttaatggatttataagtgc 29587905  T
Q  165 caaagggggcgat 177  Q
    |||| ||| ||||    
T  29587906 caaatgggacgat 29587918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 456 - 537
Target Start/End: Complemental strand, 46002296 - 46002215
Alignment:
Q  456 tgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcat 537  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  46002296 tgtcgaatagggcgattaaaagtattatgccaattggggcgatatctagatcatggtctagttgcatttcatgcatctgcat 46002215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 13169943 - 13170011
Alignment:
Q  162 tgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    ||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  13169943 tgccaaatggggtgattcaatggatttttaagtgccaaatggggcgattattattatatgccaaatggg 13170011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 17855358 - 17855420
Alignment:
Q  116 taagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||||||||||| | |||||||    
T  17855358 taagtgccaaatggggcgattattattatttcaatagatttataagtgccaaatgaggcgatt 17855420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 588 - 639
Target Start/End: Original strand, 31211793 - 31211843
Alignment:
Q  588 agtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgat 639  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  31211793 agtgatgaatattttaaactaaaaagaaatg-tcttagcacaattccttgat 31211843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 46021430 - 46021484
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  46021430 gtagatagaagagatggcaaagccatcataaactcacacac-acaaaatggaggta 46021484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 65494 - 65543
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  65494 tgccaattggggcgatatccggatcatggtcaagttgcatctcatgcatc 65543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 174
Target Start/End: Original strand, 9745646 - 9745703
Alignment:
Q  115 ttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggc 174  Q
    ||||||| ||||||||||||||| |||||||||||||||||  ||||||||||| |||||    
T  9745646 ttaagtgccaaatggggcgattattattatttcaatggatt--taagtgccaaatggggc 9745703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 13169901 - 13169953
Alignment:
Q  177 ttcaatggattttaagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    ||||||||||| ||||||||||||||||||||||| | ||||| |||||||||    
T  13169901 ttcaatggattataagtgccaaatggggcgattatgattatatgccaaatggg 13169953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 9506841 - 9506895
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||    
T  9506841 gtagatagaagagatggtaaggccatcataaactcacacac-acaaagtggaggta 9506895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 9745604 - 9745667
Alignment:
Q  115 ttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||| ||||| ||||||||| |||| ||||||||||||  ||||||||||| |||||||||    
T  9745604 ttaagtgccaaatcgggcgattattattttttcaatggattcttaagtgccaaatggggcgatt 9745667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 537
Target Start/End: Original strand, 3387938 - 3387979
Alignment:
Q  496 gatatccggatcatggtctatttgcatttcatgcatctgcat 537  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  3387938 gatatccagatcatggtctacttgcatttcatgcatctgcat 3387979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 496 - 537
Target Start/End: Original strand, 31211668 - 31211709
Alignment:
Q  496 gatatccggatcatggtctatttgcatttcatgcatctgcat 537  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  31211668 gatatccggattatggtctagttgcatttcatgcatctgcat 31211709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 2354795 - 2354851
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggtat 306  Q
    ||||||||| || ||||||||||||| |||||||||||||||   ||||||||||||    
T  2354795 gtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggtat 2354851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 8312204 - 8312264
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    |||||| ||||| |||||| |||||| |||||||||||||||||| ||||||||| |||||    
T  8312204 ttcaatggatttataagtgtcaaatggggcgattattattatatgtcaaatgggatgattc 8312264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 13169901 - 13169953
Alignment:
Q  387 ttcaattgattttaagtgccaaatgaggcgattattattatatgacaaatggg 439  Q
    |||||| |||| ||||||||||||| ||||||||| |||||||| ||||||||    
T  13169901 ttcaatggattataagtgccaaatggggcgattatgattatatgccaaatggg 13169953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 8856403 - 8856361
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  8856403 gtagatagacgaaatggcaaagccattataaactcacacacaa 8856361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 23789415 - 23789457
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  23789415 gtagatagacgaaatggcaaagccattataaactcacacacaa 23789457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 183 - 213
Target Start/End: Original strand, 29587851 - 29587881
Alignment:
Q  183 ggattttaagtgccaaatggggcgattatta 213  Q
    |||||||||||||||||||||||||||||||    
T  29587851 ggattttaagtgccaaatggggcgattatta 29587881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 41708543 - 41708585
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||    
T  41708543 gtagatagaagagatggtaaagccatcataaactcacatacaa 41708585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 312 - 350
Target Start/End: Original strand, 43416368 - 43416406
Alignment:
Q  312 ccggactaacaatatcggcatttttgccaattgagttag 350  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  43416368 ccggcctaacaatatcggcatttttgccagttgagttag 43416406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 353
Target Start/End: Complemental strand, 1869863 - 1869822
Alignment:
Q  312 ccggactaacaatatcggcatttttgccaattgagttaggac 353  Q
    |||| |||||||||||||||||||||||| ||||| ||||||    
T  1869863 ccggcctaacaatatcggcatttttgccagttgagctaggac 1869822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 1869944 - 1869903
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  1869944 gtagatagacgaaatggcaaagccattataaactcacacaca 1869903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 3497517 - 3497558
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  3497517 gtagatagacgaaatggcaaagccattataaactcacacaca 3497558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 3861336 - 3861377
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  3861336 gtagatagacgaaatggcaaagccattataaactcacacaca 3861377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 4106682 - 4106641
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4106682 gtagatagatgaaatggcaaagccattataaactcacacaca 4106641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 4674309 - 4674350
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4674309 gtagatagacgaaatggcaaagccattataaactcacacaca 4674350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 4887513 - 4887554
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4887513 gtagatagacgaaatggcaaagccattataaactcacacaca 4887554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 9745544 - 9745581
Alignment:
Q  177 ttcaatggattt-taagtgccaaatggggcgattatta 213  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9745544 ttcaatggatttataagtgccaaatggggcgattatta 9745581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 213
Target Start/End: Original strand, 9745634 - 9745671
Alignment:
Q  177 ttcaatggatt-ttaagtgccaaatggggcgattatta 213  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  9745634 ttcaatggattcttaagtgccaaatggggcgattatta 9745671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 12014732 - 12014773
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  12014732 gtagatagacgaaatggcaaagccattataaactcacacaca 12014773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 12961823 - 12961864
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||||||||||| ||||| ||| |||||||||||||||    
T  12961823 gtagatagaagagatgacaaagtcatcataaactcacacaca 12961864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 16816819 - 16816778
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  16816819 gtagatagacgaaatggcaaagccattataaactcacacaca 16816778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 18945052 - 18945011
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  18945052 gtagatagatgaaatggcaaagccattataaactcacacaca 18945011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 28382706 - 28382665
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  28382706 gtagatagacgaaatggcaaagccattataaactcacacaca 28382665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 31717425 - 31717384
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  31717425 gtagatagacgaaatggcaaagccattataaactcacacaca 31717384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 35157084 - 35157125
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  35157084 gtagatagacgaaatggcaaagccattataaactcacacaca 35157125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 35849423 - 35849382
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  35849423 gtagatagacgaaatggcaaagccattataaactcacacaca 35849382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 36251779 - 36251738
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| ||||||||||| |||| |||||||||||||||    
T  36251779 gtagatagacgagatggcaaaaccatcataaactcacacaca 36251738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 38678163 - 38678204
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  38678163 gtagatagacgaaatggcaaagccattataaactcacacaca 38678204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 40011989 - 40012030
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  40011989 gtagatagacgaaatggcaaagccattataaactcacacaca 40012030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 40013392 - 40013351
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  40013392 gtagatagacgaaatggcaaagccattataaactcacacaca 40013351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 43723440 - 43723399
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  43723440 gtagatagacgaaatggcaaagccattataaactcacacaca 43723399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 48612645 - 48612604
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  48612645 gtagatagacgaaatggcaaagccattataaactcacacaca 48612604  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 4227461 - 4227421
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  4227461 tagatagacgaaatggcaaagccattataaactcacacaca 4227421  T

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Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 10061017 - 10061057
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  10061017 tagatagacgaaatggcaaagccattataaactcacacaca 10061057  T

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Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 426
Target Start/End: Original strand, 17855387 - 17855427
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattatta 426  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  17855387 ttcaatagatttataagtgccaaatgaggcgattattatta 17855427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 34708716 - 34708680
Alignment:
Q  317 ctaacaatatcggcatttttgccaattgagttaggac 353  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  34708716 ctaacaatatcggcatttttgccagttgagctaggac 34708680  T

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Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 292
Target Start/End: Complemental strand, 35289963 - 35289931
Alignment:
Q  260 gagatggcaaagccataataaactcacacacaa 292  Q
    |||||||||||||||| ||||||||||||||||    
T  35289963 gagatggcaaagccatcataaactcacacacaa 35289931  T

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Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 39580551 - 39580602
Alignment:
Q  253 gatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    |||||||||||||||||| |||| ||||| |||||||| | ||||||||||||    
T  39580551 gatagaagagatggcaaaaccatcataaaatcacacac-ataaagtggaggta 39580602  T

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Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 40656109 - 40656149
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  40656109 tagatagacgaaatggcaaagccattataaactcacacaca 40656149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 46734202 - 46734238
Alignment:
Q  317 ctaacaatatcggcatttttgccaattgagttaggac 353  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  46734202 ctaacaatttcgacatttttgccaattgagttaggac 46734238  T

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Target: chr2 (Bit Score: 172; Significance: 4e-92; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 363 - 643
Target Start/End: Original strand, 22404315 - 22404592
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    |||||||||||||||||| || |||||||| |||||| |||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||| |||    
T  22404315 attattatatgccaaatgtggtgattcaatggattttgaagtgccaaatggggcgattattattatatgtcaaatggagcgattctttattatatgccaa 22404414  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||   |||||||||||||| ||| |||||    
T  22404415 aagggacgattaaaactattatgccaattggggcgatatccggatcatgctctatttgcatttcatgcatttg---catcaacattgagtcttgagtctt 22404511  T
Q  562 gtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||||||||||| ||| || ||||| |||||||||||||||||| |||||||||||| |||||||||| |||||||||||||    
T  22404512 gtgtttgttcttgtagtatattttagagtgatgaatattttaaattaaaaagaaatg-ttttagcacagttccttgatgatg 22404592  T

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Target: chr2; HSP #2
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 363 - 643
Target Start/End: Complemental strand, 29046121 - 29045845
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||||| |||| ||||||||||| |||||| ||||| |||||| | |||||||||||||||| |||||||| ||||||||||||||||| |||    
T  29046121 attattatatgccgaatggggcgattcaatggatttttaagtgtcaaatgggtcgattattattatatgtcaaatggggcgattctttattatatgccaa 29046022  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||   |||||||||||| | ||| |||||    
T  29046021 atggggcgattaaaactattatgccaattggggcgatatccggatcatgatctatttgca-ttcatgcatctg---catcaacattgaatcttgagtctt 29045926  T
Q  562 gtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||||||||||||| | || ||||| |||||| |||||||| || |||||||||||| |||||||||||||| |||||||||    
T  29045925 gtgtttgttcttatggtatattttaaagtgattaatattttgaattaaaaagaaatg-ttttagcacaattctttgatgatg 29045845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 363 - 643
Target Start/End: Complemental strand, 27976784 - 27976501
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||| |||||| |||||||||||| ||| |  |||||||  |||||||||||||| || ||    
T  27976784 attattatatgtcaaatggggcgattcaatggatttttaagtgtcaaatggggcgattattatgataagttaaatggggtgattctttattataagttaa 27976685  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctg---catcatcaacattgagttttgggt 558  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||   ||||||||||||||||| ||  ||    
T  27976684 atgggtcgattaaaactattatgccaattggggcgatatctggatcatgatctatttgcatttcatgcatttgcatcatcatcaacattgagtatttagt 27976585  T
Q  559 cttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
     ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  27976584 attgtgtttgttcttatagcatattttagagtgatgaatattttaaact-aaaagaaattattttagcacaattccttgatgatg 27976501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 363 - 643
Target Start/End: Complemental strand, 28063312 - 28063029
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||| |||||| |||||||||||| ||| |  |||||||  |||||||||||||| || ||    
T  28063312 attattatatgtcaaatggggcgattcaatggatttttaagtgtcaaatggggcgattattatgataagttaaatggggtgattctttattataagttaa 28063213  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctg---catcatcaacattgagttttgggt 558  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||   ||||||||||||||||| ||  ||    
T  28063212 atgggtcgattaaaactattatgccaattggggcgatatctggatcatgatctatttgcatttcatgcatttgcatcatcatcaacattgagtatttagt 28063113  T
Q  559 cttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
     ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  28063112 attgtgtttgttcttatagcatattttagagtgatgaatattttaaact-aaaagaaattattttagcacaattccttgatgatg 28063029  T

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Target: chr2; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 363 - 643
Target Start/End: Original strand, 16329421 - 16329698
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    ||||||||||| ||| ||  |||||| ||| |||||| ||||||||||||  ||||||||||| ||||| |||||||| |||||||||| |||||| |||    
T  16329421 attattatatgtcaattggagcgatttaatggatttttaagtgccaaatggcgcgattattatcatatgccaaatggggcgattctttaatatatgccaa 16329520  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
    |||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||| || ||    
T  16329521 atggggtgattaaaactattatgctagttggggcgatatccggatcatggtctatttgcatttcatgcatctg---catcaacattgagtcttgagtatt 16329617  T
Q  562 gtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    |||||||||||| ||| || ||||| ||| ||||||| |||||| ||||||||||| || ||||||| | |||| |||||||    
T  16329618 gtgtttgttcttttagtatattttagagtaatgaatagtttaaattaaaaagaaat-atcttagcacgactcctagatgatg 16329698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 16130959 - 16130785
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||    
T  16130959 attttgaagtttagtgat--tgtgaaattcataattatgtggttcaagagtcagaaaagtttgtaatttatagaaa-agtgcatagcatgcatatcattg 16130863  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  16130862 catttgatggatctttaagtgccaaatgtggcgattattattatttcaatggatttataagtgccaaatggggcgatt 16130785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 27977029 - 27976862
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27977029 attttgaagtataatgatgatgtgaaattcataattatgtggtt-aagagtcggaaaagtttgtagtttatagaaagaatgcatagcatgcatatcattg 27976931  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||         |||| |||||||||||||||  |||| |||||||||||| |||||| |||| |||||||||    
T  27976930 catttgat---------agtgccaaatggggcgattatcattacttcaatggatttttaagtgtcaaatggggcgatt 27976862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 28063557 - 28063390
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28063557 attttgaagtataatgatgatgtgaaattcataattatgtggtt-aagagtcggaaaagtttgtagtttatagaaagaatgcatagcatgcatatcattg 28063459  T
Q  101 catttgatggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||         |||| |||||||||||||||  |||| |||||||||||| |||||| |||| |||||||||    
T  28063458 catttgat---------agtgccaaatggggcgattatcattacttcaatggatttttaagtgtcaaatggggcgatt 28063390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 22404047 - 22404209
Alignment:
Q  10 tttaatgatgatgtgaaattcataa-ttatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgat 108  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||| || ||||||||||||||||||||||||||||||    
T  22404047 tttagtgatgatgtgaaattcataagttatgtggttcaagagtcgaaaaagtttgtaatttacagagagtgtgcatagcatgcatatcattgcatttgat 22404146  T
Q  109 ggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaaggg 171  Q
    ||||  ||||||| |||||||| |||||| ||||||||||||||| || |||||| |||||||    
T  22404147 ggattattaagtgacaaatgggacgattattattatttcaatggaattttaagtgtcaaaggg 22404209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 460 - 617
Target Start/End: Complemental strand, 16130623 - 16130465
Alignment:
Q  460 aaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtc 559  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||   ||||||||||||| ||  ||     
T  16130623 aaatggggcgattaaaactattatgccagttggagcgatatctggatcatggtctatttgcatttcatgcatctgc---atcaacattgagtcttaagta 16130527  T
Q  560 ttgtgtttgttctta----tagcatgttttatagtgatgaatattttaaactaaaaagaaat 617  Q
    |||||||||||||||    ||| || ||||| ||| |||||||||||||| | |||||||||    
T  16130526 ttgtgtttgttcttaattttagtatattttagagtaatgaatattttaaatttaaaagaaat 16130465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 16329207 - 16329327
Alignment:
Q  54 gaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggcgattaatattatttcaatgga 153  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  16329207 gaaaagtttgtaatttatagaaa-agtgcatagcatgcatatcattgcatttgatggatctttaagtgccaaatgtggcgattattattatttcaatgga 16329305  T
Q  154 tttataagtgccaaagggggcgatt 178  Q
    |   |||||| |||| |||||||||    
T  16329306 t---taagtgtcaaatggggcgatt 16329327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 29046420 - 29046299
Alignment:
Q  46 aagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtcaaatggggcgattaatattatt 145  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||    
T  29046420 aagagtcgaaaaagtttgtaatttatagaaa-agtgcatagcatgcatatcattgcatttgctggatctttaagtgtcaaatgaggcgattatcattatt 29046322  T
Q  146 tcaatggatttataagtgccaaa 168  Q
    |||||| | || |||||| ||||    
T  29046321 tcaatgaaattctaagtgtcaaa 29046299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 29046226 - 29046102
Alignment:
Q  116 taagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcga----------ttcaatggattt-taagtgccaaatgggg 204  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||| | |||||          |||||||||||| ||||||||||||||||    
T  29046226 taagtgtcaaatggggcgattattattatttcaatggatttataagtgtcaaatgtggcgattattattatttcaatggatttataagtgccaaatgggg 29046127  T
Q  205 cgattattaatatataccaaatggg 229  Q
    ||||||||| ||||| || ||||||    
T  29046126 cgattattattatatgccgaatggg 29046102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 29046193 - 29046122
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  29046193 atggatttataagtgtcaaatgtggcgattattattatttcaatggatttataagtgccaaatggggcgatt 29046122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 27976891 - 27976834
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgc 164  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27976891 atggatttttaagtgtcaaatggggcgattattattatttcaatggatttataagtgc 27976834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 28063419 - 28063362
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgc 164  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28063419 atggatttttaagtgtcaaatggggcgattattattatttcaatggatttataagtgc 28063362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 29046309 - 29046248
Alignment:
Q  116 taagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||  ||||||||    
T  29046309 taagtgtcaaatggg-cgattattattatttcaatggatttataagtgccaaatcgggcgatt 29046248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 27976833 - 27976785
Alignment:
Q  130 ggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  27976833 ggcgattattattatttcaatggatttataagtgccaaatggggcgatt 27976785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 178
Target Start/End: Complemental strand, 28063361 - 28063313
Alignment:
Q  130 ggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||    
T  28063361 ggcgattattattatttcaatggatttataagtgccaaatggggcgatt 28063313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 16130694 - 16130611
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgatt 445  Q
    ||||||||||| ||| || ||||||||||| |||||| |||||||||||| |||||||||||| |||||  ||||||| |||||    
T  16130694 attattatatgtcaattggggcgattcaatggatttttaagtgccaaatggggcgattattatcatatgcgaaatggggcgatt 16130611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 16130758 - 16130695
Alignment:
Q  115 ttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||| ||||||||||||||| |||||||||||||||||  |||||| |||| |||||||||    
T  16130758 ttaagtgccaaatggggcgattactattatttcaatggattcttaagtggcaaacggggcgatt 16130695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 13491151 - 13491100
Alignment:
Q  254 atagaagagatggcaaagccataataaactcacacacaacaaagtggaggtat 306  Q
    |||||||||||||||||||||  |||||||||||||| |||||||||||||||    
T  13491151 atagaagagatggcaaagccaccataaactcacacac-acaaagtggaggtat 13491100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 16130677 - 16130633
Alignment:
Q  170 ggggcgattcaatggatttt-aagtgccaaatggggcgattatta 213  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  16130677 ggggcgattcaatggatttttaagtgccaaatggggcgattatta 16130633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 17052683 - 17052632
Alignment:
Q  253 gatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||    
T  17052683 gatagaagagatggcaaagccatcataaattcacacac-acaaagtggaggta 17052632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 22404250 - 22404314
Alignment:
Q  114 tttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    |||||||||||| ||||||||||| |||||||| |||||| || |||||| |||| |||||||||    
T  22404250 tttaagtgtcaattggggcgattattattatttgaatggaattttaagtgtcaaatggggcgatt 22404314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 27976818 - 27976758
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  27976818 ttcaatggatttataagtgccaaatggggcgattattattatatgtcaaatggggcgattc 27976758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 28063346 - 28063286
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  28063346 ttcaatggatttataagtgccaaatggggcgattattattatatgtcaaatggggcgattc 28063286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 16329357 - 16329420
Alignment:
Q  115 ttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||| ||||||||||||||| | |||||||||||||||  |||||| |||| |||||||||    
T  16329357 ttaagtgccaaatggggcgattacttttatttcaatggattcttaagtggcaaatggggcgatt 16329420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 22404324 - 22404391
Alignment:
Q  162 tgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatgg 228  Q
    ||||||| | || ||||||||||||||| |||||||||||||||||||||||| |||||  |||||||    
T  22404324 tgccaaatgtggtgattcaatggattttgaagtgccaaatggggcgattattattatatgtcaaatgg 22404391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 10392773 - 10392732
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  10392773 gtagatagacgaaatggcaaagccataataaactcacacaca 10392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 532
Target Start/End: Complemental strand, 19714012 - 19713967
Alignment:
Q  487 aattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||    
T  19714012 aattggggcgatatccggatcatggtcaagttgcatctcatgcatc 19713967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 27976772 - 27976723
Alignment:
Q  165 caaagggggcgattcaatggatttt-aagtgccaaatggggcgattatta 213  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  27976772 caaatggggcgattcaatggatttttaagtgtcaaatggggcgattatta 27976723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 27976818 - 27976765
Alignment:
Q  177 ttcaatggattt-taagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||||||||||| ||||||||||||||||||||||||| |||||  ||||||||    
T  27976818 ttcaatggatttataagtgccaaatggggcgattattattatatgtcaaatggg 27976765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 28063300 - 28063251
Alignment:
Q  165 caaagggggcgattcaatggatttt-aagtgccaaatggggcgattatta 213  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  28063300 caaatggggcgattcaatggatttttaagtgtcaaatggggcgattatta 28063251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 28063346 - 28063293
Alignment:
Q  177 ttcaatggattt-taagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||||||||||| ||||||||||||||||||||||||| |||||  ||||||||    
T  28063346 ttcaatggatttataagtgccaaatggggcgattattattatatgtcaaatggg 28063293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 29046104 - 29046044
Alignment:
Q  170 ggggcgattcaatgga-ttttaagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||| |||||  ||||||||    
T  29046104 ggggcgattcaatggatttttaagtgtcaaatgggtcgattattattatatgtcaaatggg 29046044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 29046155 - 29046095
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  29046155 ttcaatggatttataagtgccaaatggggcgattattattatatgccgaatggggcgattc 29046095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 816475 - 816425
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtgga 301  Q
    ||||||||| ||||||||||| |||| |||||||||||||| ||||||||||    
T  816475 gtagatagacgagatggcaaaaccatcataaactcacacac-acaaagtgga 816425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 32517817 - 32517871
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    |||||||||  ||||||||||| ||| |||||||||||||| ||||||||||||||    
T  32517817 gtagatagataagatggcaaagtcatcataaactcacacac-acaaagtggaggta 32517871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 18741398 - 18741451
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    |||||||| |||||| ||||| ||| |||||||||||||| ||||||||||||||    
T  18741398 tagatagacgagatgacaaagtcatcataaactcacacac-acaaagtggaggta 18741451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 486 - 532
Target Start/End: Complemental strand, 19704419 - 19704373
Alignment:
Q  486 caattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||| |||||||||||||||||| | |||||| |||||||||    
T  19704419 caattggggtgatatccggatcatggtcaagttgcatctcatgcatc 19704373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 22404290 - 22404332
Alignment:
Q  185 attttaagtgccaaatggggcgattattaatatataccaaatg 227  Q
    |||||||||| |||||||||||||||||| ||||| |||||||    
T  22404290 attttaagtgtcaaatggggcgattattattatatgccaaatg 22404332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 437
Target Start/End: Original strand, 22404290 - 22404332
Alignment:
Q  395 attttaagtgccaaatgaggcgattattattatatgacaaatg 437  Q
    |||||||||| |||||| |||||||||||||||||| ||||||    
T  22404290 attttaagtgtcaaatggggcgattattattatatgccaaatg 22404332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 22999204 - 22999151
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggt 304  Q
    ||||||||| |||||| |||| |||| |||||||||||||| |||||||||||||    
T  22999204 gtagatagacgagatgacaaaaccatcataaactcacacac-acaaagtggaggt 22999151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 637093 - 637041
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggagg 303  Q
    ||||||||| |||||||||||  ||| |||||||||||||| ||||||||||||    
T  637093 gtagatagacgagatggcaaaatcatcataaactcacacac-acaaagtggagg 637041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 4014813 - 4014854
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4014813 gtagatagacgaaatggcaaagccattataaactcacacaca 4014854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 6731670 - 6731629
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  6731670 gtagatagacgaaatggcaaagccattataaactcacacaca 6731629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 11061510 - 11061469
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  11061510 gtagatagacgaaatggcaaagccattataaactcacacaca 11061469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 11543799 - 11543840
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  11543799 gtagatagacgaaatggcaaagccattataaactcacacaca 11543840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 13267975 - 13268016
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  13267975 gtagatagacgaaatggcaaagccattataaactcacacaca 13268016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 16130818 - 16130781
Alignment:
Q  177 ttcaatggattt-taagtgccaaatggggcgattatta 213  Q
    |||||||||||| |||||||||||||||||||||||||    
T  16130818 ttcaatggatttataagtgccaaatggggcgattatta 16130781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 16329441 - 16329498
Alignment:
Q  173 gcgattcaatggatttt-aagtgccaaatggggcgattattaatatataccaaatggg 229  Q
    |||||| |||||||||| ||||||||||||| ||||||||||  |||| |||||||||    
T  16329441 gcgatttaatggatttttaagtgccaaatggcgcgattattatcatatgccaaatggg 16329498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 20251485 - 20251526
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  20251485 gtagatagacgaaatggcaaagccattataaactcacacaca 20251526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 21840449 - 21840490
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||||||| ||||||||||||| |||||||||| ||||    
T  21840449 gtagatagaagaaatggcaaagccattataaactcacccaca 21840490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 24381373 - 24381332
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  24381373 gtagatagacgaaatggcaaagccattataaactcacacaca 24381332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29046452 - 29046419
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataa 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  29046452 attttgaagtttagtgatgatgtgaaattcataa 29046419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 31054176 - 31054135
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||| |||||||||||||||||||||||||    
T  31054176 gtagatagacgaaatgacaaagccataataaactcacacaca 31054135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 33607171 - 33607130
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  33607171 gtagatagacgaaatggcaaagccattataaactcacacaca 33607130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 34481671 - 34481712
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  34481671 gtagatagacgaaatggcaaagccattataaactcacacaca 34481712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 34667172 - 34667131
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  34667172 gtagatagacgaaatggcaaagccattataaactcacacaca 34667131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 35476490 - 35476531
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  35476490 gtagatagacgaaatggcaaagccattataaactcacacaca 35476531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 36216753 - 36216794
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36216753 gtagatagacgaaatggcaaagccattataaactcacacaca 36216794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 36754741 - 36754782
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36754741 gtagatagacgaaatggcaaagccattataaactcacacaca 36754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 36755076 - 36755035
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36755076 gtagatagacgaaatggcaaagccattataaactcacacaca 36755035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 36794932 - 36794891
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36794932 gtagatagacgaaatggcaaagccattataaactcacacaca 36794891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 39070147 - 39070106
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  39070147 gtagatagacgaaatggcaaagccattataaactcacacaca 39070106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 40812145 - 40812104
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  40812145 gtagatagacgaaatggcaaagccattataaactcacacaca 40812104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 44276391 - 44276350
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  44276391 gtagatagacgaaatggcaaagccattataaactcacacaca 44276350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 45049513 - 45049472
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  45049513 gtagatagacgaaatggcaaagccattataaactcacacaca 45049472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 727290 - 727330
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  727290 tagatagacgaaatggcaaagccattataaactcacacaca 727330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 287
Target Start/End: Original strand, 29360631 - 29360667
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcaca 287  Q
    |||||||| |||||||||||||||| |||||||||||    
T  29360631 tagatagacgagatggcaaagccatcataaactcaca 29360667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 164; Significance: 3e-87; HSPs: 6)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 363 - 643
Target Start/End: Original strand, 108388 - 108664
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgatttt-aagtgccaaatgaggcgattattattatatgacaaatgggacgattctttattatatgtcaa 461  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||  ||| ||| ||||||||||||||||| |||    
T  108388 attattatatgccaaatgaggcgattcaatggatttttaagtgccaaatggggcgattattattatatgctaaaaggggcgattctttattatatgccaa 108487  T
Q  462 atggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagttttgggtctt 561  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||   |||||||||||||| || ||||||    
T  108488 atggggcgattaaaactattatgccaattgggatgatatccggatcatggtctgtttgcatttcatgcatttg---catcaacattgagtctt-ggtctt 108583  T
Q  562 gtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
    ||||||||| |||||| || ||||| ||||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  108584 gtgtttgttattatagtatattttagagtgatatatattttgaactaaaaagaaatg-ttttagcacaattccttgatgatg 108664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 108121 - 108303
Alignment:
Q  1 attttgaagtttaatgatgatgtgaaattcataattatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattg 100  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  108121 attttgaagtttagtgatga-gtgaaattcataattatgtggttcaagagtcggaaaagtt-gtaatttatagaaa-agtgcatagcatgcatatcattg 108217  T
Q  101 catttgatggatctttaagtgtcaa--------atggggcgattaatattatttcaatggatttataagtgccaaagggggcgatt 178  Q
    ||||||||||||||||||||| |||        |||||||||||| ||||||||||||| ||||||||||| |||| ||| |||||    
T  108218 catttgatggatctttaagtgccaaatggggcgatggggcgattattattatttcaatgaatttataagtgtcaaatgggacgatt 108303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 107 - 168
Target Start/End: Original strand, 108316 - 108377
Alignment:
Q  107 atggatctttaagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaa 168  Q
    |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  108316 atggatttataagtgtcaaatggggcgattattattatttcaatggatttataagtgccaaa 108377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 116 - 227
Target Start/End: Original strand, 108283 - 108405
Alignment:
Q  116 taagtgtcaaatggggcgattaatattatttcaatggatttataagtgccaaagggggcga----------ttcaatggattt-taagtgccaaatgggg 204  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||          |||||||||||| ||||||||||||| ||    
T  108283 taagtgtcaaatgggacgattattattatttcaatggatttataagtgtcaaatggggcgattattattatttcaatggatttataagtgccaaatgagg 108382  T
Q  205 cgattattaatatataccaaatg 227  Q
    ||| ||||| ||||| |||||||    
T  108383 cgaatattattatatgccaaatg 108405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 108397 - 108455
Alignment:
Q  162 tgccaaagggggcgattcaatggatttt-aagtgccaaatggggcgattattaatatat 219  Q
    ||||||| | |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  108397 tgccaaatgaggcgattcaatggatttttaagtgccaaatggggcgattattattatat 108455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 108354 - 108414
Alignment:
Q  387 ttcaattgattt-taagtgccaaatgaggcgattattattatatgacaaatgggacgattc 446  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||| |||||| | ||||||    
T  108354 ttcaatggatttataagtgccaaatgaggcgaatattattatatgccaaatgaggcgattc 108414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 88; Significance: 6e-42; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 455 - 643
Target Start/End: Complemental strand, 148014 - 147831
Alignment:
Q  455 atgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagtttt 554  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||    |||||||||| |    
T  148014 atgtcaaatgtgacgattaaaactattatgccaattggggcgatatccggatcatggtctacttgcatctcatgcatctacatc----acattgagttat 147919  T
Q  555 gggtcttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
      || |||||||||||| ||||| || ||||| |||||||||||||||||| |||||| ||||| | ||||||  |||||| |||||||    
T  147918 tagttttgtgtttgttcgtatagtatattttagagtgatgaatattttaaattaaaaacaaatg-tcttagcaggattcctagatgatg 147831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 148253 - 148141
Alignment:
Q  25 aaattcataa-ttatgtggttcaagagtcggaaaagtttgtagtttatagaaagagtgcatagcatgcatatcattgcatttgatggatctttaagtgtc 123  Q
    |||||||||| ||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||||||||||  ||||||| |    
T  148253 aaattcataaattatgcggttcaagagtcggaaaactttgtaatttatagaaaaagtgcatagcatgcatatcattacatttgatggattattaagtgcc 148154  T
Q  124 aaatggggcgatt 136  Q
    |||||||||||||    
T  148153 aaatggggcgatt 148141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 148170 - 148105
Alignment:
Q  149 atggatttataagtgccaaagggggcgattcaatggat-tttaagtgccaaatggggcgattatta 213  Q
    |||||||  ||||||||||| ||||||||||| ||||| |||||||||||||||||| ||||||||    
T  148170 atggattattaagtgccaaatggggcgattcactggatctttaagtgccaaatggggtgattatta 148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 148137 - 148090
Alignment:
Q  108 tggatctttaagtgtcaaatggggcgattaatattatttcaatggatt 155  Q
    |||||||||||||| ||||||||| ||||| ||||| |||||||||||    
T  148137 tggatctttaagtgccaaatggggtgattattattacttcaatggatt 148090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 426
Target Start/End: Complemental strand, 148166 - 148102
Alignment:
Q  363 attattatatgccaaatgcggcgattcaattgat-tttaagtgccaaatgaggcgattattatta 426  Q
    |||||||  ||||||||| ||||||||| | ||| ||||||||||||||| || |||||||||||    
T  148166 attattaagtgccaaatggggcgattcactggatctttaagtgccaaatggggtgattattatta 148102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 455 - 643
Target Start/End: Complemental strand, 35382 - 35199
Alignment:
Q  455 atgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcatcatcaacattgagtttt 554  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||| ||||    |||||||||| |    
T  35382 atgtcaaatgtgacgattaaaactattatgtcaattggggcgatatccggatcatggtctacttgcatctcatgcatctacatc----acattgagttat 35287  T
Q  555 gggtcttgtgtttgttcttatagcatgttttatagtgatgaatattttaaactaaaaagaaatgattttagcacaattccttgatgatg 643  Q
      || |||||||||||| ||||| || ||||| |||||||||||||||||| |||||| ||||| | ||||||  |||||| |||||||    
T  35286 tagttttgtgtttgttcgtatagtatattttagagtgatgaatattttaaattaaaaacaaatg-tcttagcaggattcctagatgatg 35199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 17210465 - 17210519
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  17210465 tagatagaagatatggcaaaaccataataaactcgcacacaacaaagtggaggta 17210519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 22625553 - 22625602
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  22625553 tgccaattggggcgatatccggatcatggtcaagttgcatctcatgcatc 22625602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 29955080 - 29955031
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  29955080 tgccaattggggcgatatccggatcatggtcaagttgcatctcatgcatc 29955031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 532
Target Start/End: Original strand, 12492291 - 12492336
Alignment:
Q  487 aattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||    
T  12492291 aattggggcgatatccagatcatggtctagttgcatctcatgcatc 12492336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 9297886 - 9297832
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||| | ||||||||| |||| |||||||||||||| ||||||||||||||    
T  9297886 gtagatagacgggatggcaaaaccatcataaactcacacac-acaaagtggaggta 9297832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 735571 - 735529
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  735571 gtagatagacgaaatggcaaagccattataaactcacacacaa 735529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 1855134 - 1855093
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  1855134 gtagatagacgaaatggcaaagccattataaactcacacaca 1855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 2959121 - 2959080
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  2959121 gtagatagacgaaatggcaaagccattataaactcacacaca 2959080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 4480602 - 4480561
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4480602 gtagatagacgaaatggcaaagccattataaactcacacaca 4480561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 7098934 - 7098893
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  7098934 gtagatagacgaaatggcaaagccattataaactcacacaca 7098893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 8329558 - 8329599
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  8329558 gtagatagacgaaatggcaaagccattataaactcacacaca 8329599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 8448142 - 8448183
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  8448142 gtagatagacgaaatggcaaagccattataaactcacacaca 8448183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 8456946 - 8456987
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  8456946 gtagatagacgaaatggcaaagccattataaactcacacaca 8456987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 10181173 - 10181132
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  10181173 gtagatagacgaaatggcaaagccattataaactcacacaca 10181132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 10330933 - 10330892
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  10330933 gtagatagacgaaatggcaaagccattataaactcacacaca 10330892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 11837922 - 11837955
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaact 283  Q
    |||||||||||||||||||||||||| |||||||    
T  11837922 gtagatagaagagatggcaaagccatcataaact 11837955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 12795019 - 12795060
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  12795019 gtagatagacgaaatggcaaagccattataaactcacacaca 12795060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 18861767 - 18861808
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  18861767 gtagatagacgaaatggcaaagccattataaactcacacaca 18861808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 29183786 - 29183745
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || |||||||| ||||||||||||||||||||    
T  29183786 gtagatagacgaaatggcaaaaccataataaactcacacaca 29183745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 32107835 - 32107876
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  32107835 gtagatagacgaaatggcaaagccattataaactcacacaca 32107876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 5660526 - 5660486
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  5660526 tagatagacgaaatggcaaagccattataaactcacacaca 5660486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 6266759 - 6266719
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  6266759 tagatagatgaaatggcaaagccattataaactcacacaca 6266719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 8939753 - 8939713
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  8939753 tagatagacgaaatggcaaagccattataaactcacacaca 8939713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 31205184 - 31205224
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  31205184 tagatagacgaaatggcaaagccattataaactcacacaca 31205224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 31094964 - 31095013
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  31094964 tgccaattggggcgatatccggatcatggtctaggtgcatctcatgcatc 31095013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 33617224 - 33617183
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  33617224 gtagatagacgaaatggcaaagccataataaactcacacaca 33617183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 6525968 - 6525913
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggtat 306  Q
    |||| ||||||||||| ||||| ||| |||||||||||||| |||||||||||||||    
T  6525968 gtagctagaagagatgacaaagtcatcataaactcacacac-acaaagtggaggtat 6525913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 537
Target Start/End: Complemental strand, 18926764 - 18926670
Alignment:
Q  442 gattctttattatatgtcaaatggggcgattaaaactattatgccaattggggcgatatccggatcatggtctatttgcatttcatgcatctgcat 537  Q
    ||||| ||||||||||| ||||||  ||||||||| || |||||| ||| | || ||||   | |||||||||||| |||||||||||||||||||    
T  18926764 gattcgttattatatgtaaaatggaacgattaaaattactatgccgattagagcaatattttggtcatggtctatt-gcatttcatgcatctgcat 18926670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 24406692 - 24406638
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||| |||||||||||||||| ||||||  |||||| ||||||||||||||    
T  24406692 gtagatagacgagatggcaaagccatcataaacatacacac-acaaagtggaggta 24406638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 26266999 - 26267054
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggta 305  Q
    ||||||||| || ||||||||||||| |||||||||||||||   |||||||||||    
T  26266999 gtagatagacgaaatggcaaagccattataaactcacacacacacaagtggaggta 26267054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 12878120 - 12878162
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  12878120 gtagatagacgaaatggcaaagccattataaactcacacacaa 12878162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 30528111 - 30528058
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggt 304  Q
    |||||||||||| |||| ||||||||  ||||||||||||| |||||||||||||    
T  30528111 gtagatagaagaaatggtaaagccatcgtaaactcacacac-acaaagtggaggt 30528058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 30568451 - 30568398
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggt 304  Q
    |||||||||||| |||| ||||||||  ||||||||||||| |||||||||||||    
T  30568451 gtagatagaagaaatggtaaagccatcgtaaactcacacac-acaaagtggaggt 30568398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 39528058 - 39528016
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacacaa 292  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  39528058 gtagatagacgaaatggcaaagccattataaactcacacacaa 39528016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 1833319 - 1833360
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  1833319 gtagatagacgaaatggcaaagccattataaactcacacaca 1833360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 4165087 - 4165046
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  4165087 gtagatagacgaaatggcaaagccattataaactcacacaca 4165046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 6029740 - 6029699
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  6029740 gtagatagacgaaatggcaaagccattataaactcacacaca 6029699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 6219191 - 6219232
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  6219191 gtagatagacgaaatggcaaagccattataaactcacacaca 6219232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 9640534 - 9640575
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  9640534 gtagatagacgaaatggcaaagccattataaactcacacaca 9640575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 16496728 - 16496687
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  16496728 gtagatagacgaaatggcaaagccattataaactcacacaca 16496687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 16906470 - 16906429
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  16906470 gtagatagatgaaatggcaaagccattataaactcacacaca 16906429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 20695483 - 20695524
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  20695483 gtagatagacgaaatggcaaagccattataaactcacacaca 20695524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 23074644 - 23074685
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  23074644 gtagatagacgaaatggcaaagccattataaactcacacaca 23074685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 23311173 - 23311214
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  23311173 gtagatagacgaaatggcaaagccattataaactcacacaca 23311214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 24443867 - 24443908
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  24443867 gtagatagacgaaatggcaaagccattataaactcacacaca 24443908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 25328304 - 25328345
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  25328304 gtagatagacgaaatggcaaagccattataaactcacacaca 25328345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 26802462 - 26802421
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  26802462 gtagatagacgaaatggcaaagccattataaactcacacaca 26802421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 26810012 - 26809971
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  26810012 gtagatagacgaaatggcaaagccattataaactcacacaca 26809971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 26825039 - 26824998
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  26825039 gtagatagacgaaatggcaaagccattataaactcacacaca 26824998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 27389927 - 27389968
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  27389927 gtagatagacgaaatggcaaagccattataaactcacacaca 27389968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 29119734 - 29119693
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  29119734 gtagatagacgaaatggcaaagccattataaactcacacaca 29119693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 34856709 - 34856668
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  34856709 gtagatagacgaaatggcaaagccattataaactcacacaca 34856668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 34930353 - 34930312
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  34930353 gtagatagacgaaatggcaaagccattataaactcacacaca 34930312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 36569407 - 36569366
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36569407 gtagatagacgaaatggcaaagccattataaactcacacaca 36569366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 36790315 - 36790356
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36790315 gtagatagacgaaatggcaaagccattataaactcacacaca 36790356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 36854158 - 36854199
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  36854158 gtagatagacgaaatggcaaagccattataaactcacacaca 36854199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 37191372 - 37191331
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  37191372 gtagatagacgaaatggcaaagccattataaactcacacaca 37191331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 38683056 - 38683015
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  38683056 gtagatagacgaaatggcaaagccattataaactcacacaca 38683015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 40044916 - 40044957
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  40044916 gtagatagacgaaatggcaaagccattataaactcacacaca 40044957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 40318785 - 40318826
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  40318785 gtagatagacgaaatggcaaagccattataaactcacacaca 40318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 41071190 - 41071149
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  41071190 gtagatagacgaaatggcaaagccattataaactcacacaca 41071149  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 42448339 - 42448298
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  42448339 gtagatagacgaaatggcaaagccattataaactcacacaca 42448298  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 18115220 - 18115180
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  18115220 tagatagacgaaatggcaaagccattataaactcacacaca 18115180  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 24652315 - 24652355
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  24652315 tagatagacgaaatggcaaagccattataaactcacacaca 24652355  T

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Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 29806694 - 29806654
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  29806694 tagatagacgaaatggcaaagccattataaactcacacaca 29806654  T

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Target: scaffold1028 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1028
Description:

Target: scaffold1028; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 1373 - 1422
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||| ||||||||| | |||||| |||||||||    
T  1373 tgccaattggggcgatatccgaatcatggtcaagttgcatctcatgcatc 1422  T

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Target: scaffold0631 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Original strand, 4841 - 4890
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||| ||||||||||||||||||||| | |||||| |||||||||    
T  4841 tgccaattgaggcgatatccggatcatggtcaagttgcatctcatgcatc 4890  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 532
Target Start/End: Complemental strand, 76088 - 76039
Alignment:
Q  483 tgccaattggggcgatatccggatcatggtctatttgcatttcatgcatc 532  Q
    ||||||||||||||||||||||||||||||| | |||||| |||| ||||    
T  76088 tgccaattggggcgatatccggatcatggtcaagttgcatctcatccatc 76039  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 22210 - 22156
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacacaacaaagtggaggtat 306  Q
    |||||||| |||||| ||||| ||| |||||||||||||| |||||||||||||||    
T  22210 tagatagacgagatgacaaagtcatcataaactcacacac-acaaagtggaggtat 22156  T

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Target: scaffold0402 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 1241 - 1282
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  1241 gtagatagacgaaatggcaaagccattataaactcacacaca 1282  T

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Target: scaffold0287 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Original strand, 1058 - 1099
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  1058 gtagatagacgaaatggcaaagccattataaactcacacaca 1099  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 291
Target Start/End: Complemental strand, 90697 - 90656
Alignment:
Q  250 gtagatagaagagatggcaaagccataataaactcacacaca 291  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  90697 gtagatagacgaaatggcaaagccattataaactcacacaca 90656  T

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Target: scaffold0595 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 472 - 432
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  472 tagatagacgaaatggcaaagccattataaactcacacaca 432  T

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Target: scaffold0515 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 2605 - 2565
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  2605 tagatagacgaaatggcaaagccattataaactcacacaca 2565  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 2605 - 2565
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  2605 tagatagacgaaatggcaaagccattataaactcacacaca 2565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 7758 - 7798
Alignment:
Q  251 tagatagaagagatggcaaagccataataaactcacacaca 291  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  7758 tagatagacgaaatggcaaagccattataaactcacacaca 7798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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