View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1623_2D_high_64 (Length: 232)
Name: NF1623_2D_high_64
Description: NF1623_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1623_2D_high_64 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 23835701 - 23835917
Alignment:
| Q |
1 |
tgcccaaacctatatttggtctacagcaagttaaccttcagtttgataattcttacctaaaaattctgcactaactatcatctttcatgaaaacttcgaa |
100 |
Q |
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| T |
23835701 |
tgcccaaacctatatttggtctacagcaagttaaccttcagtttgataattcttacctaaaaattctgcactaactatcatctttcatgaaaactttgaa |
23835800 |
T |
|
| Q |
101 |
agttaaatcagctcactttatattcacttttagcttacaaataacatcgcacaatcaaagatcatcattcatcacgcaaacattcactgaaacatccact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23835801 |
agttaaatcagctcactttatattcacttttagcttacaaataacatcgcacaatcaaagatcatcattcatcacgcaaacattcactgaaacatccact |
23835900 |
T |
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| Q |
201 |
ttatcaacacataaagt |
217 |
Q |
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||||||||||||||||| |
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| T |
23835901 |
ttatcaacacataaagt |
23835917 |
T |
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