View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1623_2D_low_38 (Length: 507)
Name: NF1623_2D_low_38
Description: NF1623_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1623_2D_low_38 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 418; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 17 - 491
Target Start/End: Original strand, 30775034 - 30775510
Alignment:
| Q |
17 |
gaacaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctc |
114 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
30775034 |
gaacaatatcatctacactactcttgtctacctttgaatcagtaagacaactctcaacagtctgtatacactcattaaaaaggtccatattgatttcctc |
30775133 |
T |
|
| Q |
115 |
aaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcc |
214 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30775134 |
aaacttgacacgagtgattgatgaagaaaagtcaatgtcttgaaataaattatctatctcaacaaatgtgagaaacttgaaggagagtgtcctttttgcc |
30775233 |
T |
|
| Q |
215 |
ttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattc |
314 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
30775234 |
ttttcacatgcagttctcaactgtctcaaagctcttggattcccggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtaattcaacattc |
30775333 |
T |
|
| Q |
315 |
tgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtccc |
414 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30775334 |
tgttatcaaagtcctctcccccgatgtgagtgtttccagcagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtccc |
30775433 |
T |
|
| Q |
415 |
accaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30775434 |
accaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
30775510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 261 - 441
Target Start/End: Original strand, 35132476 - 35132656
Alignment:
| Q |
261 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgc |
360 |
Q |
| |
|
||||||| || |||||||| |||| || || | |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||| | ||| || |
|
|
| T |
35132476 |
taatgtctactttgttctttctcttgaactcttgtacaaagtagttcaccattctgttatcaaagtcctctccaccgagatgagtgtttccggcagtggc |
35132575 |
T |
|
| Q |
361 |
tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
||||||| || |||| ||| |||| || || | || ||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
35132576 |
cttaacttggaagacattatccttaatagtaagtattgaaacatcaaaagtgccaccaccaagatcgaagacaaaaatatt |
35132656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 263 - 491
Target Start/End: Complemental strand, 9336029 - 9335801
Alignment:
| Q |
263 |
atgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctt |
362 |
Q |
| |
|
|||||||| || |||||| | || || || || ||||| ||||| | ||||||||||||||||||||| || || | ||| |||||||| | || |||| |
|
|
| T |
9336029 |
atgtccactttattcttcttttttaactcttccacaaaatagttaaccattctgttatcaaagtcctcgcctccaaggtgcgtgtttcctgcggtggctt |
9335930 |
T |
|
| Q |
363 |
taacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacc |
462 |
Q |
| |
|
| |||||||| | |||| | |||| ||||| | ||||||||||||||| || ||||| |||||||||||||||||||| | | | ||||||| | |
|
|
| T |
9335929 |
ttacttcaaatagatcacccttaattgtgaggatagacacatcaaaagtaccgccacccagatcaaagacaaaaatatttcggttaccatcacagtcatt |
9335830 |
T |
|
| Q |
463 |
tctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
|||||| ||||| |||||||||||||||| |
|
|
| T |
9335829 |
tctcttatcaaggccatatgcaatagctg |
9335801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 35132304 - 35132387
Alignment:
| Q |
80 |
atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaa |
163 |
Q |
| |
|
||||||| ||||||||||| ||| ||||||||||||||| | || |||||||||||||||| |||||||||||||||||| |
|
|
| T |
35132304 |
atacactcattaaaaaggtctgcattcatttcctcaaacttggcgcgattgattgatgaagaaaaatcaatgccttgaaataaa |
35132387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 491
Target Start/End: Complemental strand, 16662378 - 16661902
Alignment:
| Q |
17 |
gaacaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctc |
114 |
Q |
| |
|
|||||||||||| ||||| | |||||||| ||||||||| || |||||||| |||| ||| ||||||| |||||||||| ||||||||||||| || |
|
|
| T |
16662378 |
gaacaatatcatgtacaccccccttgtccatctttgaatccacaaaacaactctcaacaatcttcatacactcgttaaaaaggcccatattgatttcttc |
16662279 |
T |
|
| Q |
115 |
aaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcc |
214 |
Q |
| |
|
|||||||||| |||||| ||||| ||| ||||||||| | | |||||| ||| ||||||| | |||| || ||||| |||||||||||||| ||| |
|
|
| T |
16662278 |
aaacttgacacgagtgagtgatgtagagaagtcaatgtcctcgtataaataatcaatctcaatagcggtgaccaatttgaaagagagtgtccttttcgcc |
16662179 |
T |
|
| Q |
215 |
ttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattc |
314 |
Q |
| |
|
|||||||| | |||||||||| ||||| |||||||||| | || || ||||| ||||||||| | |||||||| | ||||||||||||||||||| |
|
|
| T |
16662178 |
ttttcacaagaagttctcaacctcctcaaggctcttggattcctagtgatatccactttgttcttcctattaaattctttcacaaagtagttcaacattc |
16662079 |
T |
|
| Q |
315 |
tgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtccc |
414 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| || |||| ||||| |||||||||||||||||||| |
|
|
| T |
16662078 |
tgttatcaaagtcctctcccccgaggtgagtgtttccagaagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtccc |
16661979 |
T |
|
| Q |
415 |
accaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| ||||||| ||| ||| || ||||| |||||||||||||||| |
|
|
| T |
16661978 |
accaccaagatcaaagacaaaaatatttctttcaccatcacaattacttcttttgtcaaggccatatgcaatagctg |
16661902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 48 - 491
Target Start/End: Complemental strand, 16657872 - 16657427
Alignment:
| Q |
48 |
ctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaag |
145 |
Q |
| |
|
|||||||||| ||||||| ||| |||||| | ||||||| || ||||| |||||||| ||||||||||||||| || | |||||||||||||||||| |
|
|
| T |
16657872 |
ctttgaatcacgaagacaattctcaacagttttcatacactcattgaaaagatccatattaatttcctcaaacttggcacgggtgattgatgaagaaaag |
16657773 |
T |
|
| Q |
146 |
tcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaag |
245 |
Q |
| |
|
||||| || ||||||||| ||||| ||||||| | |||| ||| || ||||||||||| |||||| | |||||||||||||||||| ||||| | |
|
|
| T |
16657772 |
tcaattccctgaaataaagaatctacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacatgcagttctcaacctcctcaagg |
16657673 |
T |
|
| Q |
246 |
ctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagt |
345 |
Q |
| |
|
|||||| | | | |||||||| || |||||| | | ||| ||||||||||||||||||| | ||||||||||||||||||||||||| | |||||| |
|
|
| T |
16657672 |
ctcttgagttcccacttatgtccaccttattcttcttttgaaactcctctacaaagtagttcaccgttctgttatcaaagtcctctcccccaaggtgagt |
16657573 |
T |
|
| Q |
346 |
gtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctc |
445 |
Q |
| |
|
|||||| | ||| ||||| || ||||| |||||| | |||| || || | ||||||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
16657572 |
gtttccggcagtggcttttacctcaaaaacatcacccttaattgtaaggatagacacatcaaaagtaccaccgccaaggtcaaagacaaaaatattccgt |
16657473 |
T |
|
| Q |
446 |
tcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
| | ||||||| || |||||| ||||| |||||||||||||||| |
|
|
| T |
16657472 |
ttaccatcacaatcacttctcttgtcaagaccatatgcaatagctg |
16657427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 443
Target Start/End: Complemental strand, 12258965 - 12258539
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| |||||||||| ||||||||||| || | ||| ||||||||||||| |||||||| || || | || ||||| |||| ||| |||||||||| |
|
|
| T |
12258965 |
acaacatcatctacattactcttgtccgtgttagcatccgtaagacaactctcaacagtcttcatgcattcattgaaaagttccaaatttatttcctcaa |
12258866 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttga-aggagagtgtcctttttgcct |
215 |
Q |
| |
|
||||| || || ||||||||| |||||| |||||||| | | ||||| ||||||||||| | ||| | || | || | || |||| |||||||| |
|
|
| T |
12258865 |
acttggcacgattgattgatgcagaaaaatcaatgccatcacataaagaatctatctcaatagttgcaacaa-caagataagaaagtgatctttttgcac |
12258767 |
T |
|
| Q |
216 |
tttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattct |
315 |
Q |
| |
|
| ||||| || ||| |||| |||||||||||||||| | | || || || |||||||| |||| || || ||||||||||| ||| |||||| |
|
|
| T |
12258766 |
tctcacaagctgttttcaatctcctcaaagctcttggatttccacttatatctactttgttctttctcttgaactcttctacaaagtaactcaccattct |
12258667 |
T |
|
| Q |
316 |
gttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtccca |
415 |
Q |
| |
|
||||||||||||||||| || | ||| |||||||||| || || ||||||| ||| |||| ||| ||||||| || ||||||||||||||||| ||| |
|
|
| T |
12258666 |
attatcaaagtcctctcctccaaggtgcgtgtttccagctgtagccttaacttgaaagacattatccttaatggttagtagagacacatcaaaagtgcca |
12258567 |
T |
|
| Q |
416 |
ccaccaagatcaaagacaaaaatattcc |
443 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
12258566 |
ccaccaagatcaaagacaaaaatattcc |
12258539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 441
Target Start/End: Original strand, 14703190 - 14703616
Alignment:
| Q |
17 |
gaacaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctc |
114 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||| | |||| |||||||||||| |||| ||| | ||||| ||||||| ||||||||| ||||| || |
|
|
| T |
14703190 |
gaacaacatcatctactctactcttgtccatcttagcatcaataagacaactctcaacaatcttcacacactcattaaaaaagtccatattcatttcttc |
14703289 |
T |
|
| Q |
115 |
aaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcc |
214 |
Q |
| |
|
||||||| | | |||| ||||||||||||||||||| |||||||||| ||||| ||||| | | | || || | ||| || ||||| ||||||||| |
|
|
| T |
14703290 |
aaacttggccctattgatcgatgaagaaaagtcaatgcattgaaataaagcatctacctcaatagtggcgacaacttggaaagaaagtgttctttttgcc |
14703389 |
T |
|
| Q |
215 |
ttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattc |
314 |
Q |
| |
|
| || || || |||||||| || || ||| |||||| | ||||||||| |||| || |||| || || | ||||||||||||| ||||| |
|
|
| T |
14703390 |
ctctcgcaagcggttctcaagctccttaaggcttttggatttccactaatgtccaatctgttttttctcttgaactcttgaacaaagtagttcaccattc |
14703489 |
T |
|
| Q |
315 |
tgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtccc |
414 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||| ||| || |||| || || || | |||| || || |||||||| |||||||| || |
|
|
| T |
14703490 |
tgttatcgaagtcctctcccccgaggtgagtgtttccagcagtagccttaatttggaagacggtgcccttaattgttaggagagacacgtcaaaagtacc |
14703589 |
T |
|
| Q |
415 |
accaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
||||||||||||||||||||| ||||| |
|
|
| T |
14703590 |
accaccaagatcaaagacaaatatatt |
14703616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 80 - 441
Target Start/End: Original strand, 7542073 - 7542434
Alignment:
| Q |
80 |
atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaa |
179 |
Q |
| |
|
||||||| ||||||||| |||||||| || |||||||||||| | | |||| |||||||||||||||||||||||||||||| ||||| ||||| | |
|
|
| T |
7542073 |
atacactcgttaaaaagatccatattcatctcctcaaacttggccctattgatcgatgaagaaaagtcaatgccttgaaataaagaatctacctcaatag |
7542172 |
T |
|
| Q |
180 |
ttgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttctt |
279 |
Q |
| |
|
| | | || ||| || |||| ||||||||| | ||||| |||||||||||| ||||| ||| |||||| | |||||||||| |||||||| |
|
|
| T |
7542173 |
tggcaacaacaaggaaagaaagtgatctttttgccctctcacaagcagttctcaacctcctcaaggcttttggattcccactaatgtccactttgttctt |
7542272 |
T |
|
| Q |
280 |
cgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatca |
379 |
Q |
| |
|
|||| || || | ||||||||||||| |||||| ||||||||||| ||||| || | ||||||||| |||| ||| || ||||||| || | |
|
|
| T |
7542273 |
tctcttgaactcttgtacaaagtagttcgccattctattatcaaagtcttctccaccaaggtgagtgttgccagcagtggccttaacttggaagttgttg |
7542372 |
T |
|
| Q |
380 |
tctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
| |||| || || | ||||||||||||||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
7542373 |
cccttaatcgttagtaaagacacatcaaaagtgccaccgccaagatcaaaaacaaaaatatt |
7542434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 301 - 441
Target Start/End: Original strand, 12234757 - 12234897
Alignment:
| Q |
301 |
gtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagac |
400 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||||||| |||||||||||| | || |||||||||| || |||| | || | || || || |||||| |
|
|
| T |
12234757 |
gtagtttaccattctgttatcaaagtcctctcccccgaggtgagtgtttccggctgtggctttaacttggaagacattacctttgattgttaggagagac |
12234856 |
T |
|
| Q |
401 |
acatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
||||||||||| ||||| || |||||||| ||||||||||| |
|
|
| T |
12234857 |
acatcaaaagtgccaccgccgagatcaaaaacaaaaatatt |
12234897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 441
Target Start/End: Original strand, 43625440 - 43625620
Alignment:
| Q |
261 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgc |
360 |
Q |
| |
|
|||| ||||| ||||||||| ||| |||||| ||| |||||||||||| |||||| | ||||||||||||||| || | |||||||||||||| ||| || |
|
|
| T |
43625440 |
taatatccacattgttcttcttctcaaattcttctgcaaagtagttcaccattctatcatcaaagtcctctcctccaaggtgagtgtttccagcagtggc |
43625539 |
T |
|
| Q |
361 |
tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
|||||| || || | || |||| || || | ||||||||||||||| ||||||||||| ||||||| |||||||| |
|
|
| T |
43625540 |
tttaacacggaagaccttgtccttaattgtaagtatagacacatcaaaagtaccaccaccaaggtcaaagatgaaaatatt |
43625620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 43625213 - 43625329
Alignment:
| Q |
36 |
actcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgatt |
133 |
Q |
| |
|
||||||||||| ||| | |||| ||||||||||||||||||| | | ||||| ||| ||||| |||||||| ||||| ||||| ||| || |||||||| |
|
|
| T |
43625213 |
actcttgtccaacttggcatcaataagacaactcttaacagttttcaaacactcgttgaaaagatccatatttatttcatcaaatttggcacgagtgatt |
43625312 |
T |
|
| Q |
134 |
gatgaagaaaagtcaat |
150 |
Q |
| |
|
|||||| | |||||||| |
|
|
| T |
43625313 |
gatgaaaagaagtcaat |
43625329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 491
Target Start/End: Complemental strand, 12245535 - 12245316
Alignment:
| Q |
272 |
ttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaa |
371 |
Q |
| |
|
|||||||| |||| || |||| | |||||||||| | |||||| |||||||| |||||||| || | |||||||||||||| ||| || ||||||| | |
|
|
| T |
12245535 |
ttgttctttctcttgaactcctgtgcaaagtagtttaccattctattatcaaaatcctctcctccaaggtgagtgtttccagcagtggccttaacttgga |
12245436 |
T |
|
| Q |
372 |
acacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctc |
471 |
Q |
| |
|
| | | ||| |||| || || | ||| || |||||||| ||||||||||||||||| |||||||| || || || || |||| | ||||||| || |
|
|
| T |
12245435 |
agatgttatccttaatagttaggatagaaacgtcaaaagtgccaccaccaagatcaaacacaaaaatgtttctttctccaacacaatcagctctcttttc |
12245336 |
T |
|
| Q |
472 |
aagtccatatgcaatagctg |
491 |
Q |
| |
|
||| |||||||||| ||||| |
|
|
| T |
12245335 |
aaggccatatgcaacagctg |
12245316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 25 - 176
Target Start/End: Original strand, 12234479 - 12234632
Alignment:
| Q |
25 |
tcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttga |
122 |
Q |
| |
|
||||| || ||||| ||||||| ||| | |||| |||||||||||| |||| ||| ||||||| ||| ||| |||||||| ||||||||||||||| |
|
|
| T |
12234479 |
tcatccaccctacttttgtccatcttagcatcactaagacaactctcaacaatcttcatacactcaataagaagatccatattcatttcctcaaacttgg |
12234578 |
T |
|
| Q |
123 |
catgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
176 |
Q |
| |
|
| | |||| ||||||||||| |||||||||| ||||||| ||||| ||||| |
|
|
| T |
12234579 |
ccctattgatcgatgaagaaaaatcaatgccttcaaataaagaatctacctcaa |
12234632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 11999191 - 11999350
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| |||||||| | |||||||||||| ||||| ||| ||| |||||||| |||||||| ||||| | |||| ||| || | ||| | |||||||| |
|
|
| T |
11999191 |
acaacatcatctatagtactcttgtccatctttgcatccataatacaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaa |
11999290 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
176 |
Q |
| |
|
|||| | || |||| ||||||||||| |||||||||||||||||| ||||| ||||| |
|
|
| T |
11999291 |
actttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaa |
11999350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 12245790 - 12245631
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| |||||||| | |||||||||||| ||||| ||| ||| |||||||| |||||||| ||||| | |||| ||| || | ||| | |||||||| |
|
|
| T |
12245790 |
acaaaatcatctatagtactcttgtccatctttgcatccataatacaactctcaacagtctttatacaatcattaagaagatctaaattcaattcctcaa |
12245691 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
176 |
Q |
| |
|
|||| | || |||| ||||||||||| |||||||||||||||||| ||||| ||||| |
|
|
| T |
12245690 |
actttgcccgattgatggatgaagaaaaatcaatgccttgaaataaagaatctacctcaa |
12245631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 41)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 491
Target Start/End: Complemental strand, 8586090 - 8585616
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||||||| ||||||| | |||| || | ||| ||||| ||||||||||||| |||||| | ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8586090 |
acaatatcgtctacaccattcttctctatcttagaatcggtaagacaactctcaacagtatttatacactcattaaaaaggtccatattgatttcctcaa |
8585991 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcctt |
216 |
Q |
| |
|
|||||||| | |||||||||||||| || || | ||| | | |||||| ||| || |||| | | |||| || ||||| || ||||||||||||||||| |
|
|
| T |
8585990 |
acttgacacgcgtgattgatgaagagaaatcgacgccctcacataaataatcaatttcaatagtagtgaccaatttgaaagaaagtgtcctttttgcctt |
8585891 |
T |
|
| Q |
217 |
ttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctg |
316 |
Q |
| |
|
||||||||| ||||| ||| | |||||||||||||| | ||||| ||||| |||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8585890 |
ttcacatgccgttcttaaccgcctcaaagctcttgggttcttagtaatatccacattgttctttctcttaaattcctcaacaaagtagttcaacattctg |
8585791 |
T |
|
| Q |
317 |
ttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccac |
416 |
Q |
| |
|
|||||||||||| ||||||| | |||||| ||||||| ||||||||||||||||| |||||| || |||| ||||| |||||||||||||||||||||| |
|
|
| T |
8585790 |
ttatcaaagtcccctcccccaaggtgagtatttccagcggttgctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaaagtcccac |
8585691 |
T |
|
| Q |
417 |
caccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
||||||||||||| ||||||||||| | ||| ||||||| ||||| | || ||||| |||||||||||||||| |
|
|
| T |
8585690 |
caccaagatcaaacacaaaaatatttcgttcaccatcacagttacctttgttgtcaaggccatatgcaatagctg |
8585616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 17 - 316
Target Start/End: Original strand, 8616463 - 8616764
Alignment:
| Q |
17 |
gaacaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctc |
114 |
Q |
| |
|
||||||||||||||||||||||||| || | ||| |||||| ||| |||||||| |||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
8616463 |
gaacaatatcatctacactactcttctctatcttagaatcattaaaacaactctcaacagtctttatacactcgttaaaaaggtccatattgatttcctc |
8616562 |
T |
|
| Q |
115 |
aaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcc |
214 |
Q |
| |
|
|||||| ||| |||||||||||||||| || || ||||| | | |||||| ||| ||||||| | | |||| || ||||| || || ||| ||| ||| |
|
|
| T |
8616563 |
aaacttaacacgagtgattgatgaagagaaatcgatgccctcacataaataatcaatctcaatagtagtgaccaatttgaatgaaagcatccgtttcgcc |
8616662 |
T |
|
| Q |
215 |
ttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattc |
314 |
Q |
| |
|
||||| ||||||||| ||||| | ||||| | |||||| | | ||||| ||||| ||||||||| ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
8616663 |
ttttcgcatgcagttttcaaccgcctcaacgatcttgggttcctagtaatatccacattgttcttcctcttaaaatcctcaacaaagtagttcaacattc |
8616762 |
T |
|
| Q |
315 |
tg |
316 |
Q |
| |
|
|| |
|
|
| T |
8616763 |
tg |
8616764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 49 - 491
Target Start/End: Original strand, 8659177 - 8659621
Alignment:
| Q |
49 |
tttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagt |
146 |
Q |
| |
|
|||||||| |||||||||||| |||||| | ||||||| |||||||| |||||||| |||||||||||| || || |||||||| ||||| | |||| |
|
|
| T |
8659177 |
tttgaatcgctaagacaactctcaacagttttcatacactcattaaaaagatccatattcatttcctcaaacctggcacgagtgattaatgaacagaagt |
8659276 |
T |
|
| Q |
147 |
caatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagc |
246 |
Q |
| |
|
| || || ||||||||| ||| | ||||||| | |||| ||| || ||||||||||| |||||| | ||||| |||||||||||| || || | |
|
|
| T |
8659277 |
ctattccctgaaataaagaatcgacctcaacagtggtgacaaaagcaaaagagagtgtcctctttgccctctcacaggcagttctcaacctccttaagga |
8659376 |
T |
|
| Q |
247 |
tcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtg |
346 |
Q |
| |
|
| |||| | | |||||||||| || |||||| | || || ||||||||||||||||||| ||||||| |||||||||||||||| || | ||||||| |
|
|
| T |
8659377 |
ttttgggttaccactaatgtccactttattcttctttttgaactcctctacaaagtagttcaccattctgctatcaaagtcctctcctccaaggtgagtg |
8659476 |
T |
|
| Q |
347 |
tttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctct |
446 |
Q |
| |
|
||||||||||| ||||| |||||||| |||||| | | || || || | ||||||||||||||| |||||||||||||||||||| |||||||| | |
|
|
| T |
8659477 |
tttccagaagtggcttttacttcaaagacatcacccttcattgtaaggatagacacatcaaaagtaccaccaccaagatcaaagaccaaaatattttgtt |
8659576 |
T |
|
| Q |
447 |
cagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
| ||||||| ||||||||| |||| |||||||||||||||| |
|
|
| T |
8659577 |
taccatcacagtcacctctcttgtcaaaaccatatgcaatagctg |
8659621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 309 - 491
Target Start/End: Original strand, 8628608 - 8628790
Alignment:
| Q |
309 |
acattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaa |
408 |
Q |
| |
|
||||||||||||||||||||||||| || | |||||| ||||||| ||| |||||||||||||| |||||| || |||| ||||| |||||||||||||| |
|
|
| T |
8628608 |
acattctgttatcaaagtcctctccaccaaggtgagtatttccagcagtggctttaacttcaaagacatcacctttaattgtgaggagagacacatcaaa |
8628707 |
T |
|
| Q |
409 |
agtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| | ||| |||||||||||||| | || ||||| |||||||||||||||| |
|
|
| T |
8628708 |
agtcccaccaccaagatcaaacacaaaaatatttcgttcaccatcacacctacctttgttgtcaaggccatatgcaatagctg |
8628790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 92 - 491
Target Start/End: Original strand, 8654309 - 8654708
Alignment:
| Q |
92 |
aaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaact |
191 |
Q |
| |
|
|||| ||||||||| ||||||||||| || || |||||||||||||||||||||| || || ||||||| ||||| ||||||| | |||| ||| |
|
|
| T |
8654309 |
aaaaagtccatattaatttcctcaaatttagcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacctcaacagtggtgacaaaag |
8654408 |
T |
|
| Q |
192 |
tgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattc |
291 |
Q |
| |
|
| || |||||| ||||||||||| | ||||| |||||||||||| || || | | |||| | | | |||| ||||| || |||||| | || || || |
|
|
| T |
8654409 |
taaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttgggttaccgctaatttccactttattcttctttttgaactc |
8654508 |
T |
|
| Q |
292 |
ctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtg |
391 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||| |||||||| | ||| |||||||||| ||| ||||| || ||||| |||||| | |||| ||| |
|
|
| T |
8654509 |
ctctacaaagtagtacaccattctgttatcaaagtcttctccccctaggtgcgtgtttccagcagtggcttttacgtcaaagacatcacccttaattgtg |
8654608 |
T |
|
| Q |
392 |
agaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
|| | ||||||||||||||| ||||||||||||||||| || |||||||||| | | ||||| | ||| || ||| ||||| |||||||||||||||| |
|
|
| T |
8654609 |
agtatagacacatcaaaagtaccaccaccaagatcaaataccaaaatattccgtttaccatcatagttacttcgcttgtcaaggccatatgcaatagctg |
8654708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 19 - 443
Target Start/End: Complemental strand, 27831259 - 27830833
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| |||||||| |||||||||||||| ||| || ||||| |||||||||| |||||||| ||||| | || ||||||||||||||||||||||||| |
|
|
| T |
27831259 |
acaacatcatctatactactcttgtccatcttagagtcagtgagacaactctcaacagtctccatacattcattgaaaaggtccatattgatttcctcaa |
27831160 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcctt |
216 |
Q |
| |
|
|||| || ||||||| |||| | ||||||||||| | |||||| ||||||||||| | | ||| || || |||||||||||||||||||| |
|
|
| T |
27831159 |
actttgcacgagtgatcattgaaaagaagtcaatgccctcaaataaggcatctatctcaatagtagtgtcaacagaaaaagagagtgtcctttttgcctt |
27831060 |
T |
|
| Q |
217 |
ttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctg |
316 |
Q |
| |
|
|||||| ||||||| | ||||| |||||||| | | |||||||||| | |||||| |||| || |||| ||||| ||||||| ||| || |
|
|
| T |
27831059 |
ctcacattaggttctcagcctcctcaaggctcttgggttcccactaatgtccactcttttcttcttcttgaacacctccacaaaatagttcaccatccta |
27830960 |
T |
|
| Q |
317 |
ttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccac |
416 |
Q |
| |
|
||||||||||||||||| || | |||||||||||||| |||||| ||||||| || || | ||| |||| || | ||||||||||||||||||||||| |
|
|
| T |
27830959 |
ttatcaaagtcctctccaccaaggtgagtgtttccagcagttgccttaacttggaagaccttatccttaattgtaacaagagacacatcaaaagtcccac |
27830860 |
T |
|
| Q |
417 |
caccaagatcaaagacaaaaatattcc |
443 |
Q |
| |
|
||||||| ||||| ||||||||||||| |
|
|
| T |
27830859 |
caccaaggtcaaacacaaaaatattcc |
27830833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 92 - 491
Target Start/End: Complemental strand, 10494683 - 10494284
Alignment:
| Q |
92 |
aaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaact |
191 |
Q |
| |
|
|||| ||| ||||| ||||||||||| ||| || |||||||||||||||||||||| || || ||||||| ||| | |||||| | |||| ||| |
|
|
| T |
10494683 |
aaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatcgacctcaacggtggtgacaaaag |
10494584 |
T |
|
| Q |
192 |
tgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattc |
291 |
Q |
| |
|
|| |||||| ||||||||||| | ||||| |||||||||||| || || | | |||||| | | ||||||||||| |||||| | || || || |
|
|
| T |
10494583 |
aaaaagagagtatcctttttgccctctcacaggcagttctcaacctccttaaggattttggattcccactgatgtccacgttattcttctttttgaactc |
10494484 |
T |
|
| Q |
292 |
ctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtg |
391 |
Q |
| |
|
||| ||||| || |||| |||||||||||| |||||||||||||| | ||||||||| || | ||| ||||| |||||||| |||||| | |||| ||| |
|
|
| T |
10494483 |
ctcaacaaaataattcaccattctgttatcgaagtcctctcccccaaggtgagtgttacctgcagtggcttttacttcaaagacatcacccttaattgtg |
10494384 |
T |
|
| Q |
392 |
agaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
|| | ||||||||||||||| |||||||| |||||||||||||||||||| | | | | ||||| || |||||| ||||| |||||||||||||||| |
|
|
| T |
10494383 |
aggatagacacatcaaaagtaccaccacccagatcaaagacaaaaatatttcggttaccctcacaatcacttctcttgtcaaggccatatgcaatagctg |
10494284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 92 - 491
Target Start/End: Complemental strand, 13333765 - 13333366
Alignment:
| Q |
92 |
aaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaact |
191 |
Q |
| |
|
|||| ||| ||||| ||||||||||| ||| || |||||||||||||||||||||| || || ||||||| ||||| |||||| | |||| ||| |
|
|
| T |
13333765 |
aaaaagtctatattaatttcctcaaatttggcacgagtgattgatgaagaaaagtcgattcccataaataaagcatctacttcaacagtggtgacaaaag |
13333666 |
T |
|
| Q |
192 |
tgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattc |
291 |
Q |
| |
|
||||||||| |||||||| || | ||||| |||||||||||| || || | | |||| | | | || || ||||| |||||| | || || || |
|
|
| T |
13333665 |
aaaaggagagtatccttttttccctctcacaggcagttctcaacctccttaaggattttgggttcccactgatatcgacgttattcttctttttgaactc |
13333566 |
T |
|
| Q |
292 |
ctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtg |
391 |
Q |
| |
|
||| ||||| ||||||| |||||||||||| ||||| |||||||| | |||||||||||| | || ||||| |||||||| |||||| | |||| || |
|
|
| T |
13333565 |
ctcaacaaaatagttcaccattctgttatcgaagtcttctcccccaaggtgagtgtttcctgcggtggcttttacttcaaagacatcacccataattgta |
13333466 |
T |
|
| Q |
392 |
agaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
|| | ||||||||||||||| |||||||| |||||||||||||||||||| | || | ||||||| || |||||| ||||| |||||||||||||||| |
|
|
| T |
13333465 |
aggatagacacatcaaaagtaccaccacccagatcaaagacaaaaatatttcgcttaccatcacaatcacgtctcttgtcaaggccatatgcaatagctg |
13333366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 263 - 441
Target Start/End: Original strand, 8667449 - 8667627
Alignment:
| Q |
263 |
atgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctt |
362 |
Q |
| |
|
|||||||| || |||||| | || || ||||| ||||| ||||||| |||||||||||| |||||||| ||||| | |||||||||||| | ||| |||| |
|
|
| T |
8667449 |
atgtccactttattcttcttttttaactcctcaacaaaatagttcaccattctgttatcgaagtcctcgcccccaaggtgagtgtttcctgcagtggctt |
8667548 |
T |
|
| Q |
363 |
taacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
| |||||||| |||||| | |||| ||||| | |||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
8667549 |
tcacttcaaagacatcacccttaattgtgaggatagacacatcaaaagtcccgccacccagatcaaagacaaaaatatt |
8667627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 91 - 443
Target Start/End: Original strand, 17267797 - 17268149
Alignment:
| Q |
91 |
aaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaac |
190 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||||| |||||||| |||| || | ||||||| |||| ||||||| | || | | | |
|
|
| T |
17267797 |
aaaaaggtccatattgatttcctcaaacttggcacgagtgattgacgaagaaaaatcaacacccttaaataaagcgtctacctcaacattggtcacagag |
17267896 |
T |
|
| Q |
191 |
ttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaatt |
290 |
Q |
| |
|
||| || |||||||||||||| ||||||||||||||||||||| |||| ||| |||| | | ||| | || || || ||| | || | || |
|
|
| T |
17267897 |
gcgaaagaaagtgtcctttttgctttttcacatgcagttctcaacctcctcatggcttttgggttcccaacaattttcaatttttttttccttttgattt |
17267996 |
T |
|
| Q |
291 |
cctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggt |
390 |
Q |
| |
|
|||| ||||| |||| | |||||| |||||||||||||| ||||| | ||||||| |||| || || |||||||| || || | ||| |||| || |
|
|
| T |
17267997 |
cctcaacaaaatagtataccattctattatcaaagtcctcacccccaagatgagtgtctccaccggtggccttaacttcgaagaccttatccttaattgt |
17268096 |
T |
|
| Q |
391 |
gagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcc |
443 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17268097 |
aacgagagacacatcaaaagtcccaccaccaaggtcaaagacaaaaatattcc |
17268149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 8559372 - 8559547
Alignment:
| Q |
272 |
ttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaa |
371 |
Q |
| |
|
||||||||| ||| ||| || | |||||||| |||| |||||||||||||||||||||||| |||| ||| |||| ||| ||||| || || ||||||| |
|
|
| T |
8559372 |
ttgttcttcctctcaaactcttttacaaagtgtttcaccattctgttatcaaagtcctctcctccgaggtgtgtgtctccggaagtggccttgacttcaa |
8559471 |
T |
|
| Q |
372 |
acacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctc |
447 |
Q |
| |
|
| | || || |||| ||||||||||| ||||||||||| |||||||| |||||||||| |||||||| ||||| |
|
|
| T |
8559472 |
agagattattcttaattgtgagaagagaaacatcaaaagttccaccaccgagatcaaagatgaaaatatttctctc |
8559547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 261 - 443
Target Start/End: Original strand, 1301488 - 1301670
Alignment:
| Q |
261 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgc |
360 |
Q |
| |
|
|||||||||| || |||||| | | || ||||||||||||||| ||| |||||| ||||||||||||||||| || | |||||| |||||| ||| || |
|
|
| T |
1301488 |
taatgtccactttattcttctttctgaactcctctacaaagtagctcaccattctattatcaaagtcctctcctccaaggtgagtatttccaccagtggc |
1301587 |
T |
|
| Q |
361 |
tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcc |
443 |
Q |
| |
|
||| |||||||| ||||| | | ||||| || | ||||||||||||||| ||||| ||||| |||||||| |||||||||| |
|
|
| T |
1301588 |
ttttacttcaaagacatcgcccttgatggtaaggatagacacatcaaaagtaccaccgccaaggtcaaagaccaaaatattcc |
1301670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 261 - 491
Target Start/End: Complemental strand, 8636483 - 8636253
Alignment:
| Q |
261 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgc |
360 |
Q |
| |
|
||||||| || ||||||||| |||| | |||||||||||| || | || |||||||||||||||||||||||| || | ||| |||| ||| | ||| || |
|
|
| T |
8636483 |
taatgtctaccttgttcttcctcttgatttcctctacaaaatattccaccattctgttatcaaagtcctctcctccaaggtgtgtgtctccggcagtggc |
8636384 |
T |
|
| Q |
361 |
tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacaccta |
460 |
Q |
| |
|
|||||||||||| || ||| || |||| |||| | |||||| || || || ||||||||||||||||| || ||||| || ||||| | |||| || |
|
|
| T |
8636383 |
tttaacttcaaagacttcacctttaattttgagtatagacacgtcgaatgtaccaccaccaagatcaaatacgaaaatgtttctctctttaacacagtta |
8636284 |
T |
|
| Q |
461 |
cctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
|||||||| | ||||||||| |||| ||||| |
|
|
| T |
8636283 |
cctctcttttgaagtccatacgcaaaagctg |
8636253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 441
Target Start/End: Original strand, 6789296 - 6789720
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| ||||| |||| |||||||||||| ||| | ||| ||||||||||| ||| |||| ||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
6789296 |
acaacatcatttacaatactcttgtccatcttagcgtcaacaagacaactctcaacggtcttcatacactcattaaaaatatccatattgatttcctcaa |
6789395 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgcctt |
216 |
Q |
| |
|
||||| | |||| | ||||||| ||||| ||||| ||||||||| |||| ||||| | | |||| | || |||||| |||||| ||| | |
|
|
| T |
6789396 |
acttggcccgagtaagtgatgaaatgaagtcgatgccctgaaataaagagtctacctcaatagtagtgacgacaacaaaagagagtacccttttggccct |
6789495 |
T |
|
| Q |
217 |
ttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctg |
316 |
Q |
| |
|
|||||| |||||||||||| ||| || || |||| | | ||||| ||||| ||||||||| ||||||| |||||| |||||||||| | || || | |
|
|
| T |
6789496 |
ttcacacgcagttctcaaccttcttaaggcccttgagtttccagtaatatccactttgttcttcctcttaaactcctctgcaaagtagtttaccaatcgg |
6789595 |
T |
|
| Q |
317 |
ttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccac |
416 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| || || ||||||| || || | |||| | || || | | ||||||||| ||||| |||| |
|
|
| T |
6789596 |
ttatcaaagtcctctcctccgaggtgagtgtttccaccggtggccttaacttggaagaccttatctttgattgttaagatagacacatcgaaagtgccac |
6789695 |
T |
|
| Q |
417 |
caccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
||||||| || ||||| |||||||| |
|
|
| T |
6789696 |
caccaaggtcgaagacgaaaatatt |
6789720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 441
Target Start/End: Original strand, 3147292 - 3147472
Alignment:
| Q |
261 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgc |
360 |
Q |
| |
|
||||||| || ||||||||| ||||||| ||| | |||||||||||| ||| || |||||||||||||||||||| | ||| |||||||| | | || |
|
|
| T |
3147292 |
taatgtctaccttgttcttcttcttaaactcccgtgcaaagtagttcaccatcctattatcaaagtcctctcccccaaggtgggtgtttcctgcgatggc |
3147391 |
T |
|
| Q |
361 |
tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
||||||| ||| || | ||| |||| || ||||||||||||||||||||||||||||| | ||||||| ||||||||| |
|
|
| T |
3147392 |
cttaacttgaaagaccttatccttaattgtaagaagagacacatcaaaagtcccaccacccaagtcaaagataaaaatatt |
3147472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 91 - 443
Target Start/End: Original strand, 17260099 - 17260451
Alignment:
| Q |
91 |
aaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaac |
190 |
Q |
| |
|
||||||||||||||||||||| ||||||||| || |||||||||| |||||||| | || || | ||||||| |||| ||||||| | || | | | |
|
|
| T |
17260099 |
aaaaaggtccatattgatttcttcaaacttggcacgagtgattgacgaagaaaaattaacacccttaaataaagcgtctacctcaacattggtcacagag |
17260198 |
T |
|
| Q |
191 |
ttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaatt |
290 |
Q |
| |
|
|| || |||||||||||||| ||||||||||||||||||||| || || ||| |||| | | ||||||||| || ||| | | || | | |
|
|
| T |
17260199 |
gcaaaagaaagtgtcctttttgctttttcacatgcagttctcaacctccttaaggcttttgggttcccaataatgtccaattttttcgttcttttgatct |
17260298 |
T |
|
| Q |
291 |
cctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggt |
390 |
Q |
| |
|
|||||||||| |||| || |||||| |||||||||||||| ||||| | ||||||| |||| || || |||||||| || || | ||| |||| || |
|
|
| T |
17260299 |
cctctacaaaatagtacaccattctattatcaaagtcctcacccccaagatgagtgtctccaccggtggccttaacttcgaagaccttatccttaattgt |
17260398 |
T |
|
| Q |
391 |
gagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcc |
443 |
Q |
| |
|
| |||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
17260399 |
aacgagagacacatcaaaagtccccccaccaaggtcaaagacaaaaatattcc |
17260451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 260 - 423
Target Start/End: Original strand, 8646904 - 8647067
Alignment:
| Q |
260 |
gtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttg |
359 |
Q |
| |
|
||||||||||| ||||||||| | |||||||| | | |||||| || || |||||| |||||||||||||||| |||| |||||||||||||| || | |
|
|
| T |
8646904 |
gtaatgtccaccttgttcttcttgttaaattcttgtgcaaagtggtccaccattctactatcaaagtcctctcctccgaggtgagtgtttccagcggtgg |
8647003 |
T |
|
| Q |
360 |
ctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaag |
423 |
Q |
| |
|
||||||| | ||| || | ||| |||| || || ||||||||||||||||| ||||||||||| |
|
|
| T |
8647004 |
ctttaacatgaaagaccttatccttaattgtaaggagagacacatcaaaagttccaccaccaag |
8647067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 446
Target Start/End: Original strand, 8545600 - 8545846
Alignment:
| Q |
200 |
agtgtcctttttgccttttcacatgcagttctcaactgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaa |
299 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||||| ||| ||| | || |||| ||| | ||||||||| |||| || |||| |||| |
|
|
| T |
8545600 |
agtgtcctttttgccttctcacaggcagttctcaacctcctcaaggcttctgggttccgactaatatcctcattgttcttcctcttgaactccttcacaa |
8545699 |
T |
|
| Q |
300 |
agtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagaga |
399 |
Q |
| |
|
|||| |||| |||||||||||||||||| || || || | || ||||| ||||| ||| || || || ||||| || | || | |||| || |||| ||| |
|
|
| T |
8545700 |
agtaattcaccattctgttatcaaagtcttcaccgcctaggtaagtgtctccagcagtggccttgacatcaaagaccttatttttaattgtaagaataga |
8545799 |
T |
|
| Q |
400 |
cacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctct |
446 |
Q |
| |
|
|||||||||||| ||||| ||||| ||||||| ||||||||| |||| |
|
|
| T |
8545800 |
cacatcaaaagttccaccgccaaggtcaaagataaaaatatttctct |
8545846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 296 - 485
Target Start/End: Original strand, 8602037 - 8602226
Alignment:
| Q |
296 |
acaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaa |
395 |
Q |
| |
|
||||||| ||||| ||||| |||||||||||||||||| || | ||| |||| ||| ||||| || || |||||||| | || || |||| ||||||| |
|
|
| T |
8602037 |
acaaagtggttcaccattcggttatcaaagtcctctcctccaaggtgtgtgtctccggaagtggccttgacttcaaagagattattcttaattgtgagaa |
8602136 |
T |
|
| Q |
396 |
gagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaa |
485 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||| | |||||||| ||||| || |||| || ||||||| | ||| |||||||||| |
|
|
| T |
8602137 |
gagaaacatcaaaagttccaccaccaagatcaaatatgaaaatatttctctcttcaacacaattagctctcttttgaaggccatatgcaa |
8602226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 431
Target Start/End: Complemental strand, 29581945 - 29581811
Alignment:
| Q |
297 |
caaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaag |
396 |
Q |
| |
|
||||||| |||| ||||| |||||||||||||||||| || | |||||| | |||| ||| || || ||||||||| |||||| | | |||||||| |
|
|
| T |
29581945 |
caaagtaattcaccattcggttatcaaagtcctctcctcctaggtgagtatcgccagcagtggccttcacttcaaacttatcatccttgagtgtgagaag |
29581846 |
T |
|
| Q |
397 |
agacacatcaaaagtcccaccaccaagatcaaaga |
431 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29581845 |
agacacatcaaaagtgccaccaccaagatcaaaga |
29581811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 428
Target Start/End: Complemental strand, 7877872 - 7877706
Alignment:
| Q |
262 |
aatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgct |
361 |
Q |
| |
|
||||||||| || |||||| ||||||| ||| || || | |||||||||||||||||||||||||||||| || | |||||| | ||| | ||| ||| |
|
|
| T |
7877872 |
aatgtccactttattcttcctcttaaactccatcactaaatggttcaacattctgttatcaaagtcctctccacctaggtgagtatctccggcagtagct |
7877773 |
T |
|
| Q |
362 |
ttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaa |
428 |
Q |
| |
|
| || ||||| ||||||| | | ||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
7877772 |
attacatcaaagctatcatcttttagtgtgagaagagacacatcgaaagtgccaccaccaagatcaa |
7877706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 8590715 - 8590836
Alignment:
| Q |
310 |
cattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaa |
409 |
Q |
| |
|
|||||||||||||||||||||||| || | ||| || | ||| ||||| ||||| || ||||| |||| || | | ||||||||||||||||||||| |
|
|
| T |
8590715 |
cattctgttatcaaagtcctctcctcctaggtgggtatctccggaagtggcttttacatcaaagctatcacctttgagtgtgagaagagacacatcaaaa |
8590814 |
T |
|
| Q |
410 |
gtcccaccaccaagatcaaaga |
431 |
Q |
| |
|
|| ||||||||||||||||||| |
|
|
| T |
8590815 |
gtgccaccaccaagatcaaaga |
8590836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 3147123 - 3147207
Alignment:
| Q |
92 |
aaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
176 |
Q |
| |
|
||||| |||||||||||||||||||||||| || |||||||||||||| | ||||||| || ||||||||| ||||||||||| |
|
|
| T |
3147123 |
aaaagatccatattgatttcctcaaacttggcacgagtgattgatgaaaataagtcaaatccctgaaataaagaatctatctcaa |
3147207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 8383262 - 8383160
Alignment:
| Q |
17 |
gaacaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctc |
114 |
Q |
| |
|
|||||| |||||||||||||||||||| || ||| | |||||||||||| |||| |||||||| |||||||| | ||| ||||||||||||| || ||| |
|
|
| T |
8383262 |
gaacaacatcatctacactactcttgttcatcttagcatcagtaagacagctctcaacagtctccatacacttttcaaataggtccatattgagttgctc |
8383163 |
T |
|
| Q |
115 |
aaa |
117 |
Q |
| |
|
||| |
|
|
| T |
8383162 |
aaa |
8383160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 441
Target Start/End: Original strand, 8609994 - 8610125
Alignment:
| Q |
310 |
cattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaa |
409 |
Q |
| |
|
|||||||| ||||||||||||||| || | |||||| | ||||| ||| || || || || || ||| | | |||| ||||||| ||||||||| ||| |
|
|
| T |
8609994 |
cattctgtgatcaaagtcctctcctccaaggtgagtatctccagcagtagccttgacatcgaaagcattgtttttaattgtgagaacagacacatcgaaa |
8610093 |
T |
|
| Q |
410 |
gtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |
|
|
| T |
8610094 |
gtcccaccaccaagatcaaagataaaaatatt |
8610125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 431
Target Start/End: Complemental strand, 29577812 - 29577642
Alignment:
| Q |
261 |
taatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgc |
360 |
Q |
| |
|
|||||||||| ||||||||| |||| || || | ||||||| | ||| |||| | ||||| ||||||||||| || | |||||| | |||| ||| || |
|
|
| T |
29577812 |
taatgtccacattgttcttcctcttcaactcattcacaaagtggctcaccattttattatcgaagtcctctcctcctaggtgagtatcaccagcagtggc |
29577713 |
T |
|
| Q |
361 |
tttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaaga |
431 |
Q |
| |
|
|| |||||||| |||||| ||| |||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
29577712 |
ctttacttcaaaactatcatccttaagtgtgagaagagacacatcaaaggtgccaccaccaagatcaaaga |
29577642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 384 - 485
Target Start/End: Complemental strand, 8382893 - 8382792
Alignment:
| Q |
384 |
taatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgc |
483 |
Q |
| |
|
|||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||| || ||| || ||||||||| ||| |||||||| |
|
|
| T |
8382893 |
taattgtgaggagagacacatcaaaagttccaccaccaagatcaaagatgaaaatatttctctcttcaagacaattagctctcttctgaaggccatatgc |
8382794 |
T |
|
| Q |
484 |
aa |
485 |
Q |
| |
|
|| |
|
|
| T |
8382793 |
aa |
8382792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 8545417 - 8545563
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| |||||||||||||| |||||||| ||| | |||| |||||||| |||||||| | |||||||| | ||| ||||||||||| | || ||||| |
|
|
| T |
8545417 |
acaacatcatctacactacccttgtccatcttagcatcaacaagacaacaattaacagtgtccatacacttttcaaagaggtccatattcaattgctcaa |
8545516 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaa |
163 |
Q |
| |
|
||||| | ||||||| ||||| |||||||||| |||||| ||||| |
|
|
| T |
8545517 |
acttggcccgagtgatgcatgaacaaaagtcaataccttgatataaa |
8545563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 8581856 - 8581958
Alignment:
| Q |
389 |
gtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatag |
488 |
Q |
| |
|
||||||| ||||||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || |||| || ||||||| | ||| |||||||||| || |
|
|
| T |
8581856 |
gtgagaatagacacatcaaaagttccacctccaaggtcaaagataaaaatatttctcttatcaacacaattagctctcttttgaaggccatatgcaagag |
8581955 |
T |
|
| Q |
489 |
ctg |
491 |
Q |
| |
|
||| |
|
|
| T |
8581956 |
ctg |
8581958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 8570095 - 8570199
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacag--tctatacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| ||||||||||||| |||| |||| ||| | ||||| ||||||||| ||||||| || |||||||| | ||| |||| |||||| |||||||||| |
|
|
| T |
8570095 |
acaacatcatctacactattcttttccatcttagcatcagcaagacaactattaacagtttccatacacttttcaaagaggttcatattcatttcctcaa |
8570194 |
T |
|
| Q |
117 |
acttg |
121 |
Q |
| |
|
||||| |
|
|
| T |
8570195 |
acttg |
8570199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 8576110 - 8576214
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| ||||||||||||| ||||||||| ||| | ||||| ||||||| | |||||||| | |||||||| | ||| |||| |||||| |||||||||| |
|
|
| T |
8576110 |
acaacatcatctacactattcttgtccatcttagcatcagcaagacaaatattaacagtattcatacacttttcaaagaggttcatattcatttcctcaa |
8576209 |
T |
|
| Q |
117 |
acttg |
121 |
Q |
| |
|
||||| |
|
|
| T |
8576210 |
acttg |
8576214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 1301316 - 1301390
Alignment:
| Q |
89 |
ttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaa |
163 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||| || |||||||| ||||| | ||||| || || ||||||||| |
|
|
| T |
1301316 |
ttaaaaagatccatattaatttcctcaaacttggcacgagtgattaatgaacagaagtcgattccctgaaataaa |
1301390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 8570467 - 8570569
Alignment:
| Q |
389 |
gtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacctacctctcttctcaagtccatatgcaatag |
488 |
Q |
| |
|
||||||| ||||||||||||||| ||||| ||||| ||||||| ||||||||| |||| | || || | || ||||||| | ||| |||||||||| || |
|
|
| T |
8570467 |
gtgagaatagacacatcaaaagttccaccgccaaggtcaaagataaaaatatttctcttatcaacaaaattagctctcttttgaaggccatatgcaagag |
8570566 |
T |
|
| Q |
489 |
ctg |
491 |
Q |
| |
|
||| |
|
|
| T |
8570567 |
ctg |
8570569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 139
Target Start/End: Original strand, 8601763 - 8601880
Alignment:
| Q |
24 |
atcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttg |
121 |
Q |
| |
|
|||||| ||||||||||| || | || | |||| |||||||||| | |||||||| |||||||| ||||| ||||||| ||||| || |||||||||| |
|
|
| T |
8601763 |
atcatccacactactcttttcgatctgagcatcactaagacaactttcaacagtctctatacacttcttaaagaggtccacattgagttgctcaaacttg |
8601862 |
T |
|
| Q |
122 |
acatgagtgattgatgaa |
139 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
8601863 |
gcccgagtgattgatgaa |
8601880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 8664907 - 8664977
Alignment:
| Q |
80 |
atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaat |
150 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| | || |||| ||||||||| |||| ||||| |
|
|
| T |
8664907 |
atacactttgtaaaaaggtccatattgatttcctcaaacctcgcacgagttattgatgaacaaaattcaat |
8664977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 8581484 - 8581624
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaaca--gtctatacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| |||||||||||||| | |||||| ||| | ||| | ||||||||| |||||| ||| |||||||| | ||| |||| |||||| |||| ||||| |
|
|
| T |
8581484 |
acaacatcatctacactacccctgtccatcttagcatcggcaagacaactattaacagtgtccatacacttttcaaagaggttcatattcatttgctcaa |
8581583 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgccttga |
157 |
Q |
| |
|
||||| | |||| ||||| ||| | |||||||| |||||| |
|
|
| T |
8581584 |
acttggcccgagttattgacgaatagaagtcaataccttga |
8581624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 8576482 - 8576534
Alignment:
| Q |
389 |
gtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
||||||| ||||||||||||||| ||||| ||||| ||||||| ||||||||| |
|
|
| T |
8576482 |
gtgagaatagacacatcaaaagttccaccgccaaggtcaaagataaaaatatt |
8576534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 8537820 - 8537942
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||| |||||| | |||||| |||||| ||| | |||| ||| ||||||||||||||| | |||||||| | ||| |||||||| |||| || ||||| |
|
|
| T |
8537820 |
acaacatcatccatactactactgtccatcttagcatcattaaaacaactcttaacagttttcatacacttttcaaagaggtccatgttgagttgctcaa |
8537919 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaa |
139 |
Q |
| |
|
||||| | |||||||||||||| |
|
|
| T |
8537920 |
acttggcccgagtgattgatgaa |
8537942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 8576293 - 8576328
Alignment:
| Q |
200 |
agtgtcctttttgccttttcacatgcagttctcaac |
235 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8576293 |
agtgtcctttttgccttttcacaagcagttctcaac |
8576328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 8646742 - 8646807
Alignment:
| Q |
98 |
tccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaa |
163 |
Q |
| |
|
|||||||||||| | ||||| ||| || |||||||||||||| |||||||||||| | ||||||| |
|
|
| T |
8646742 |
tccatattgattgcgtcaaatttggcacgagtgattgatgaaataaagtcaatgccattaaataaa |
8646807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 8538198 - 8538234
Alignment:
| Q |
395 |
agagacacatcaaaagtcccaccaccaagatcaaaga |
431 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
8538198 |
agagatacatcaaaagttccaccaccaagatcaaaga |
8538234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 441
Target Start/End: Complemental strand, 4678912 - 4678518
Alignment:
| Q |
48 |
ctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaag |
145 |
Q |
| |
|
|||||||||| ||||||||||||||||||| | ||||||| ||| |||||||||||||| ||||||||||||||| || |||| || |||||||||||| |
|
|
| T |
4678912 |
ctttgaatcactaagacaactcttaacagtttccatacactcgttgaaaaggtccatattaatttcctcaaacttggcacgagtaatagatgaagaaaag |
4678813 |
T |
|
| Q |
146 |
tcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaactgtctcaaag |
245 |
Q |
| |
|
|| || || ||||||||| ||||| ||||||| | |||| ||| ||| ||||||||||| |||||| | || || |||||||||||| || || | |
|
|
| T |
4678812 |
tctattccctgaaataaagaatcta-ctcaacagtggtgacaaaggcgaaagagagtgtcctctttgccctctcgcaggcagttctcaacctccttaagg |
4678714 |
T |
|
| Q |
246 |
ctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagt |
345 |
Q |
| |
|
| ||| | |||||||||| || |||||| | || || ||||||||||||||||||| |||||||||||||||||||||||| || | |||||| |
|
|
| T |
4678713 |
gttttgcgttcttactaatgtccacattattcttctttttgaactcctctacaaagtagttcaccattctgttatcaaagtcctctccacctaggtgagt |
4678614 |
T |
|
| Q |
346 |
gtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
|||||||| ||| ||||| |||||||| ||| || | | || | || | ||||||||||||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
4678613 |
gtttccagcagtggcttttacttcaaagacaccacccttgattttaaggatagacacatcaaaagtaccaccaccaaggtcaaagacaaatatatt |
4678518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 297 - 441
Target Start/End: Complemental strand, 34466897 - 34466753
Alignment:
| Q |
297 |
caaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttgctttaacttcaaacacatcatctctaatggtgagaag |
396 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||| |||| ||||||||| |||||||| || ||||||||||| |||| ||| |||| || || || |
|
|
| T |
34466897 |
caaagtggttcgccattctattatcaaagtcctctcgtccgaggtgagtgttaccagaagtggccttaacttcaaagacattatccttaattgtaaggag |
34466798 |
T |
|
| Q |
397 |
agacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
34466797 |
agacacatcaaaagtcccaccaccaaggtcaaagacgaaaatatt |
34466753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 260 - 491
Target Start/End: Original strand, 15595061 - 15595292
Alignment:
| Q |
260 |
gtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccagaagttg |
359 |
Q |
| |
|
||||| ||||| |||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| || | |||||||||||| || | |
|
|
| T |
15595061 |
gtaatatccactttgttcttcgtcttgaattcctgcgcaaagtagttgaccattctgttatcaaagtcctctcctccaaggtgagtgtttccgcctgtgg |
15595160 |
T |
|
| Q |
360 |
ctttaacttcaaacacatcatctctaatggtgagaagagacacatcaaaagtcccaccaccaagatcaaagacaaaaatattcctctcagcatcacacct |
459 |
Q |
| |
|
| ||||||| || || | || |||| || || | ||||||||||||||| ||||||||||||||||||||||||||||| || || || |||| | |
|
|
| T |
15595161 |
ccttaacttggaagaccttgtccttaattgttaggatagacacatcaaaagtgccaccaccaagatcaaagacaaaaatatttctttctccaacacagtt |
15595260 |
T |
|
| Q |
460 |
acctctcttctcaagtccatatgcaatagctg |
491 |
Q |
| |
|
| ||||| ||||| |||||||||||||||| |
|
|
| T |
15595261 |
aatcctcttgtcaaggccatatgcaatagctg |
15595292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 34467089 - 34467047
Alignment:
| Q |
97 |
gtccatattgatttcctcaaacttgacatgagtgattgatgaa |
139 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||| ||| |
|
|
| T |
34467089 |
gtccatattgatttcctcaaacttggcacgagtgattgacgaa |
34467047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 52549333 - 52549292
Alignment:
| Q |
80 |
atacacttgttaaaaaggtccatattgatttcctcaaacttg |
121 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
52549333 |
atacactccttaaaaaggtccatattcatttcctcaaacttg |
52549292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 37 - 354
Target Start/End: Original strand, 43744618 - 43744937
Alignment:
| Q |
37 |
ctcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaaacttgacatgagtgattg |
134 |
Q |
| |
|
|||||||||| ||| | ||||||||||||||||| |||| | | | ||||| ||| || || ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
43744618 |
ctcttgtccatcttggcatcagtaagacaactctcaacaattttcaaacactcgttgaagagatccatattgatttcctcaaacttagtacgagtgattg |
43744717 |
T |
|
| Q |
135 |
atgaagaaaagtcaatgccttgaaataaattatctatctcaacaattgtgagaaacttgaaggagagtgtcctttttgccttttcacatgcagttctcaa |
234 |
Q |
| |
|
|| | | || |||||||| | ||||||| ||||| ||||| | | |||| || || || | |||||||||||| |||| ||||| |||||||| |
|
|
| T |
43744718 |
ttgtaaagaaatcaatgccctcaaataaagaatctacctcaatagtggtgacaacagcaaaagataatgtcctttttgctctttcgcatgctgttctcaa |
43744817 |
T |
|
| Q |
235 |
ctgtctcaaagctcttggatcgcgggtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctccc |
334 |
Q |
| |
|
| || || |||||||| | | ||||||||||| ||||||||| ||||||| |||||| | |||||||||| ||| || |||||||| |||||||| |
|
|
| T |
43744818 |
cctccttaatgctcttgggtttccagtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctattatcaaaatcctctcct |
43744917 |
T |
|
| Q |
335 |
ccgatgtgagtgtttccaga |
354 |
Q |
| |
|
|||| ||||||||||||||| |
|
|
| T |
43744918 |
ccgaggtgagtgtttccaga |
43744937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 153
Target Start/End: Original strand, 12528288 - 12528424
Alignment:
| Q |
19 |
acaatatcatctacactactcttgtccacctttgaatcagtaagacaactcttaacagtct--atacacttgttaaaaaggtccatattgatttcctcaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| | ||| || | |||||| | ||| |||| |||||||| | ||| ||||||||||| | || ||| | |
|
|
| T |
12528288 |
acaatatcatctacactactcttgtccatcttagcatcggtcaaacaactttcaacggtctccatacacttttcaaagaggtccatattcagttgctcga |
12528387 |
T |
|
| Q |
117 |
acttgacatgagtgattgatgaagaaaagtcaatgcc |
153 |
Q |
| |
|
||||| | ||||||||||||| | ||||||||||| |
|
|
| T |
12528388 |
acttggctcgagtgattgatgagcagaagtcaatgcc |
12528424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 441
Target Start/End: Original strand, 43745011 - 43745057
Alignment:
| Q |
395 |
agagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||| |||||||| |
|
|
| T |
43745011 |
agagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatt |
43745057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 54; Significance: 9e-22; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 28219945 - 28220038
Alignment:
| Q |
260 |
gtaatgtccacgttgttcttcgtcttaaattcctctacaaagtagttcaacattctgttatcaaagtcctctcccccgatgtgagtgtttccag |
353 |
Q |
| |
|
||||||||||| ||||||||| ||||||| |||||| | |||||||||| ||| || ||||||||||||||||||||| |||||||||||||| |
|
|
| T |
28219945 |
gtaatgtccaccttgttcttcttcttaaactcctctgcgaagtagttcaccatcctactatcaaagtcctctcccccgaggtgagtgtttccag |
28220038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 28219777 - 28219861
Alignment:
| Q |
92 |
aaaaggtccatattgatttcctcaaacttgacatgagtgattgatgaagaaaagtcaatgccttgaaataaattatctatctcaa |
176 |
Q |
| |
|
||||| ||||||||||||||||||||||| || |||| ||||||||| | || |||||||||| ||||||| ||||| ||||| |
|
|
| T |
28219777 |
aaaagatccatattgatttcctcaaacttagcacgagtaattgatgaaaagaaatcaatgccttcaaataaagaatctacctcaa |
28219861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 441
Target Start/End: Original strand, 28220113 - 28220159
Alignment:
| Q |
395 |
agagacacatcaaaagtcccaccaccaagatcaaagacaaaaatatt |
441 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||| |||||||| |
|
|
| T |
28220113 |
agagacacatcaaaagtcccaccacccaggtcaaagatgaaaatatt |
28220159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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