View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1623_2D_low_90 (Length: 345)

Name: NF1623_2D_low_90
Description: NF1623_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1623_2D_low_90
NF1623_2D_low_90
[»] chr6 (36 HSPs)
chr6 (96-345)||(30434603-30434854)
chr6 (1-77)||(6330114-6330190)
chr6 (1-76)||(2830335-2830410)
chr6 (1-76)||(8383024-8383099)
chr6 (1-76)||(9644696-9644771)
chr6 (1-76)||(9650713-9650788)
chr6 (1-76)||(11572200-11572275)
chr6 (1-76)||(26602323-26602398)
chr6 (1-76)||(33052849-33052924)
chr6 (1-76)||(8099530-8099605)
chr6 (1-76)||(13853648-13853723)
chr6 (1-76)||(35031056-35031131)
chr6 (1-76)||(6143554-6143629)
chr6 (1-76)||(13043758-13043833)
chr6 (1-76)||(6068566-6068641)
chr6 (1-76)||(8417848-8417923)
chr6 (5-60)||(28747193-28747248)
chr6 (3-68)||(6068997-6069062)
chr6 (1-76)||(22896471-22896537)
chr6 (30-76)||(35031001-35031047)
chr6 (32-77)||(2830421-2830466)
chr6 (32-77)||(8382968-8383013)
chr6 (1-46)||(17992018-17992063)
chr6 (32-76)||(3788123-3788167)
chr6 (32-76)||(6330201-6330245)
chr6 (32-76)||(8099616-8099660)
chr6 (32-76)||(9644782-9644826)
chr6 (32-76)||(9650799-9650843)
chr6 (32-76)||(11572145-11572189)
chr6 (25-65)||(12473651-12473691)
chr6 (32-76)||(13853593-13853637)
chr6 (32-76)||(26602409-26602453)
chr6 (19-57)||(6549902-6549940)
chr6 (30-76)||(17992072-17992118)
chr6 (32-76)||(6068652-6068696)
chr6 (32-76)||(8417793-8417837)
[»] chr8 (47 HSPs)
chr8 (1-76)||(32211418-32211493)
chr8 (1-76)||(54667-54742)
chr8 (1-76)||(2890217-2890292)
chr8 (1-76)||(3304333-3304408)
chr8 (1-76)||(6552655-6552730)
chr8 (1-76)||(7785833-7785908)
chr8 (1-76)||(7805754-7805829)
chr8 (1-76)||(12343195-12343270)
chr8 (1-76)||(32114530-32114605)
chr8 (1-76)||(43199409-43199484)
chr8 (1-76)||(44498242-44498317)
chr8 (1-78)||(31654611-31654688)
chr8 (1-76)||(12763709-12763784)
chr8 (1-76)||(15888407-15888482)
chr8 (1-76)||(25601055-25601130)
chr8 (1-76)||(39571258-39571333)
chr8 (1-76)||(7012171-7012246)
chr8 (1-76)||(33289316-33289391)
chr8 (14-76)||(4245649-4245711)
chr8 (1-76)||(13578857-13578932)
chr8 (8-73)||(28463614-28463679)
chr8 (1-76)||(8587170-8587245)
chr8 (22-76)||(27422266-27422320)
chr8 (19-69)||(13246801-13246851)
chr8 (22-76)||(25601000-25601054)
chr8 (30-76)||(32211363-32211409)
chr8 (32-76)||(54612-54656)
chr8 (32-76)||(2890162-2890206)
chr8 (32-76)||(6552741-6552785)
chr8 (32-76)||(7785778-7785822)
chr8 (32-76)||(33289261-33289305)
chr8 (32-76)||(39571203-39571247)
chr8 (32-76)||(43199354-43199398)
chr8 (2-61)||(28999104-28999163)
chr8 (32-70)||(12343146-12343184)
chr8 (5-71)||(17006916-17006982)
chr8 (5-71)||(17570265-17570331)
chr8 (4-76)||(27422193-27422262)
chr8 (30-76)||(32114475-32114521)
chr8 (32-77)||(3304277-3304322)
chr8 (43-76)||(6899419-6899452)
chr8 (32-76)||(7012257-7012301)
chr8 (32-76)||(7805699-7805743)
chr8 (32-76)||(12763654-12763698)
chr8 (8-64)||(24692040-24692096)
chr8 (32-76)||(31654699-31654743)
chr8 (32-76)||(44498187-44498231)
[»] chr1 (49 HSPs)
chr1 (1-76)||(23278056-23278131)
chr1 (1-76)||(34042696-34042771)
chr1 (1-77)||(39402021-39402097)
chr1 (1-76)||(9981647-9981722)
chr1 (1-76)||(26471120-26471195)
chr1 (1-76)||(27159413-27159488)
chr1 (1-76)||(31842850-31842925)
chr1 (1-76)||(44668148-44668223)
chr1 (1-76)||(47216754-47216829)
chr1 (1-76)||(1050888-1050963)
chr1 (1-76)||(11795933-11796008)
chr1 (1-76)||(14984837-14984912)
chr1 (1-76)||(44955261-44955336)
chr1 (1-76)||(47777536-47777611)
chr1 (2-76)||(12483684-12483758)
chr1 (5-76)||(47588396-47588467)
chr1 (1-70)||(47969700-47969770)
chr1 (4-84)||(11897046-11897126)
chr1 (1-76)||(17556752-17556828)
chr1 (1-64)||(25694331-25694394)
chr1 (2-76)||(12213530-12213604)
chr1 (22-68)||(37552217-37552263)
chr1 (8-76)||(16448170-16448238)
chr1 (4-61)||(11989796-11989853)
chr1 (32-76)||(11897140-11897184)
chr1 (32-70)||(44955212-44955250)
chr1 (4-77)||(37552140-37552213)
chr1 (32-76)||(11796019-11796063)
chr1 (22-66)||(12062635-12062679)
chr1 (32-76)||(12483628-12483672)
chr1 (32-76)||(14984923-14984967)
chr1 (32-76)||(17556839-17556883)
chr1 (32-76)||(25694405-25694449)
chr1 (32-76)||(27159358-27159402)
chr1 (32-76)||(31842795-31842839)
chr1 (32-76)||(39401966-39402010)
chr1 (32-76)||(44668093-44668137)
chr1 (32-76)||(47777481-47777525)
chr1 (32-71)||(9981733-9981772)
chr1 (22-69)||(12043679-12043726)
chr1 (18-76)||(11989853-11989911)
chr1 (20-69)||(40676796-40676845)
chr1 (51-84)||(43929469-43929502)
chr1 (43-76)||(47678371-47678404)
chr1 (36-76)||(1050978-1051018)
chr1 (32-76)||(26471065-26471109)
chr1 (32-76)||(34042782-34042826)
chr1 (40-76)||(39720779-39720815)
chr1 (32-76)||(47216699-47216743)
[»] chr7 (37 HSPs)
chr7 (1-77)||(23314194-23314270)
chr7 (1-76)||(1565784-1565859)
chr7 (1-76)||(1738502-1738577)
chr7 (1-76)||(7240749-7240824)
chr7 (1-76)||(31319454-31319529)
chr7 (1-76)||(38063968-38064043)
chr7 (1-76)||(46840860-46840935)
chr7 (1-76)||(4790248-4790323)
chr7 (1-76)||(7482225-7482300)
chr7 (1-76)||(9268756-9268831)
chr7 (1-76)||(28536806-28536881)
chr7 (1-76)||(36583395-36583470)
chr7 (1-76)||(94373-94448)
chr7 (5-76)||(22285699-22285770)
chr7 (5-76)||(36016255-36016326)
chr7 (1-76)||(38441460-38441535)
chr7 (2-70)||(40840175-40840243)
chr7 (5-60)||(33418392-33418447)
chr7 (1-76)||(9575409-9575484)
chr7 (4-77)||(7269463-7269536)
chr7 (32-77)||(22285785-22285830)
chr7 (32-76)||(1738447-1738491)
chr7 (32-76)||(7240835-7240879)
chr7 (32-76)||(7482311-7482355)
chr7 (32-76)||(9268842-9268886)
chr7 (32-76)||(23314139-23314183)
chr7 (32-76)||(38441546-38441590)
chr7 (32-76)||(46840946-46840990)
chr7 (152-207)||(28322878-28322933)
chr7 (32-70)||(33418462-33418500)
chr7 (32-77)||(31319398-31319443)
chr7 (32-69)||(40840126-40840163)
chr7 (32-76)||(94318-94362)
chr7 (32-76)||(4790334-4790378)
chr7 (32-76)||(9575495-9575539)
chr7 (32-76)||(36583481-36583525)
chr7 (32-76)||(38063913-38063957)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-76)||(12860-12935)
scaffold0482 (32-76)||(12946-12990)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-76)||(23785-23860)
scaffold0204 (32-76)||(23871-23915)
[»] chr5 (35 HSPs)
chr5 (1-76)||(9395350-9395425)
chr5 (1-76)||(37149010-37149085)
chr5 (1-76)||(582989-583064)
chr5 (1-76)||(11795168-11795243)
chr5 (1-76)||(20848074-20848149)
chr5 (1-76)||(23359942-23360017)
chr5 (1-76)||(36563593-36563668)
chr5 (1-76)||(41989462-41989537)
chr5 (5-76)||(13033051-13033122)
chr5 (5-76)||(13103024-13103095)
chr5 (1-76)||(26350405-26350480)
chr5 (1-76)||(37641953-37642029)
chr5 (1-76)||(17025624-17025699)
chr5 (5-76)||(4443960-4444031)
chr5 (5-76)||(38361750-38361821)
chr5 (1-55)||(6126845-6126899)
chr5 (1-69)||(13539922-13539986)
chr5 (5-52)||(21575970-21576017)
chr5 (32-84)||(6126910-6126962)
chr5 (22-71)||(966224-966273)
chr5 (30-70)||(11574164-11574204)
chr5 (32-76)||(23360028-23360072)
chr5 (32-76)||(9395436-9395480)
chr5 (32-76)||(13103110-13103154)
chr5 (32-76)||(17025710-17025754)
chr5 (32-76)||(36563538-36563582)
chr5 (32-76)||(41989407-41989451)
chr5 (5-76)||(39290775-39290845)
chr5 (4-62)||(3549605-3549663)
chr5 (30-68)||(36595782-36595820)
chr5 (32-76)||(11795254-11795298)
chr5 (32-76)||(13033137-13033181)
chr5 (32-76)||(21576032-21576076)
chr5 (32-76)||(37148955-37148999)
chr5 (32-76)||(37642040-37642084)
[»] chr4 (54 HSPs)
chr4 (1-76)||(3372121-3372196)
chr4 (1-76)||(20538741-20538816)
chr4 (1-76)||(24704370-24704445)
chr4 (1-76)||(47833611-47833686)
chr4 (1-76)||(48336263-48336338)
chr4 (1-76)||(53337370-53337445)
chr4 (1-77)||(46797724-46797800)
chr4 (1-76)||(3992976-3993051)
chr4 (1-76)||(6121948-6122023)
chr4 (1-76)||(26231577-26231652)
chr4 (1-76)||(33551201-33551276)
chr4 (1-76)||(42797732-42797807)
chr4 (2-76)||(3904739-3904813)
chr4 (1-76)||(7579310-7579385)
chr4 (1-76)||(43900549-43900624)
chr4 (1-76)||(47838672-47838747)
chr4 (1-76)||(52756675-52756750)
chr4 (3-76)||(40913246-40913319)
chr4 (4-76)||(51894640-51894712)
chr4 (1-76)||(33621796-33621871)
chr4 (2-76)||(5986876-5986950)
chr4 (5-76)||(41469825-41469896)
chr4 (1-64)||(3422073-3422135)
chr4 (2-65)||(29845656-29845719)
chr4 (2-64)||(41615732-41615794)
chr4 (4-76)||(25855083-25855155)
chr4 (22-77)||(4780371-4780426)
chr4 (20-76)||(3904683-3904739)
chr4 (32-76)||(42797818-42797862)
chr4 (4-70)||(17236845-17236912)
chr4 (32-76)||(3422146-3422190)
chr4 (32-76)||(6121893-6121937)
chr4 (32-76)||(20538686-20538730)
chr4 (22-62)||(32822285-32822325)
chr4 (32-76)||(41469766-41469810)
chr4 (32-76)||(46797811-46797855)
chr4 (32-76)||(47833697-47833741)
chr4 (32-76)||(47838617-47838661)
chr4 (32-76)||(51894582-51894626)
chr4 (32-71)||(40913194-40913233)
chr4 (32-70)||(5986962-5987000)
chr4 (22-76)||(24704446-24704500)
chr4 (32-77)||(3372207-3372252)
chr4 (32-77)||(7579396-7579441)
chr4 (5-70)||(17344219-17344284)
chr4 (32-77)||(44900079-44900124)
chr4 (4-61)||(50430476-50430533)
chr4 (32-76)||(3993062-3993106)
chr4 (19-71)||(21636196-21636248)
chr4 (32-76)||(33621882-33621926)
chr4 (30-70)||(38160378-38160418)
chr4 (32-76)||(43900635-43900679)
chr4 (32-76)||(48336349-48336393)
chr4 (32-76)||(53337456-53337500)
[»] chr3 (51 HSPs)
chr3 (1-76)||(4238594-4238669)
chr3 (1-76)||(10297979-10298054)
chr3 (1-76)||(19557107-19557182)
chr3 (1-76)||(22721931-22722006)
chr3 (1-76)||(44785451-44785526)
chr3 (1-76)||(49823436-49823511)
chr3 (4-76)||(34080088-34080160)
chr3 (1-77)||(37508920-37508996)
chr3 (1-76)||(2787887-2787962)
chr3 (1-76)||(8437425-8437500)
chr3 (1-76)||(8817441-8817516)
chr3 (1-76)||(17653712-17653787)
chr3 (5-76)||(21295385-21295456)
chr3 (1-76)||(38964392-38964467)
chr3 (1-76)||(48340397-48340472)
chr3 (1-76)||(51406673-51406748)
chr3 (1-76)||(9111549-9111624)
chr3 (1-76)||(35513473-35513548)
chr3 (1-76)||(36095735-36095810)
chr3 (1-76)||(40691051-40691126)
chr3 (1-76)||(42507410-42507485)
chr3 (5-76)||(46208030-46208101)
chr3 (4-76)||(42170404-42170476)
chr3 (1-71)||(6013391-6013461)
chr3 (1-69)||(33942987-33943055)
chr3 (18-76)||(9213588-9213646)
chr3 (32-85)||(4238680-4238733)
chr3 (32-76)||(17653798-17653842)
chr3 (32-76)||(21295326-21295370)
chr3 (32-76)||(37509007-37509051)
chr3 (32-76)||(46208116-46208160)
chr3 (30-76)||(51406757-51406803)
chr3 (32-77)||(19557051-19557096)
chr3 (21-70)||(33128212-33128261)
chr3 (32-77)||(34080029-34080074)
chr3 (32-76)||(6013336-6013380)
chr3 (32-76)||(10298065-10298109)
chr3 (32-76)||(38964478-38964522)
chr3 (32-76)||(40690996-40691040)
chr3 (32-76)||(48340483-48340527)
chr3 (32-76)||(49823381-49823425)
chr3 (32-71)||(9111499-9111538)
chr3 (32-71)||(42507360-42507399)
chr3 (22-76)||(45652069-45652123)
chr3 (32-77)||(2787831-2787876)
chr3 (32-69)||(8817393-8817430)
chr3 (32-69)||(22722017-22722054)
chr3 (32-77)||(44785395-44785440)
chr3 (32-76)||(8437511-8437555)
chr3 (32-76)||(9027142-9027186)
chr3 (4-64)||(43323072-43323132)
[»] chr2 (44 HSPs)
chr2 (1-76)||(3055558-3055633)
chr2 (1-76)||(4683987-4684062)
chr2 (1-76)||(6648574-6648649)
chr2 (1-76)||(13197765-13197840)
chr2 (1-76)||(13344484-13344559)
chr2 (1-76)||(15896842-15896917)
chr2 (1-76)||(37990068-37990143)
chr2 (1-76)||(41478694-41478769)
chr2 (1-76)||(44397547-44397622)
chr2 (1-76)||(44398686-44398761)
chr2 (1-77)||(37666665-37666741)
chr2 (1-76)||(12337992-12338067)
chr2 (1-76)||(16044372-16044447)
chr2 (1-76)||(16243838-16243913)
chr2 (1-76)||(38917577-38917652)
chr2 (5-74)||(30099241-30099310)
chr2 (4-76)||(15372226-15372298)
chr2 (1-76)||(9047810-9047885)
chr2 (1-65)||(41492951-41493015)
chr2 (2-76)||(12170455-12170529)
chr2 (1-48)||(44804633-44804680)
chr2 (1-70)||(31150659-31150728)
chr2 (5-61)||(4553069-4553125)
chr2 (32-76)||(41492896-41492940)
chr2 (32-82)||(13197704-13197754)
chr2 (32-76)||(3055644-3055688)
chr2 (32-76)||(6648519-6648563)
chr2 (32-76)||(9047755-9047799)
chr2 (32-76)||(12337937-12337981)
chr2 (32-76)||(15372312-15372356)
chr2 (32-76)||(15896928-15896972)
chr2 (32-76)||(37990013-37990057)
chr2 (32-76)||(38917522-38917566)
chr2 (32-76)||(41478639-41478683)
chr2 (32-76)||(44398772-44398816)
chr2 (18-76)||(13724102-13724160)
chr2 (32-69)||(16243790-16243827)
chr2 (4-57)||(16734802-16734855)
chr2 (4-45)||(41453090-41453131)
chr2 (32-76)||(13344570-13344614)
chr2 (36-76)||(16044317-16044357)
chr2 (32-76)||(30099182-30099226)
chr2 (36-76)||(37666610-37666650)
chr2 (32-68)||(44397633-44397669)
[»] scaffold0009 (2 HSPs)
scaffold0009 (2-76)||(49505-49579)
scaffold0009 (32-76)||(49591-49635)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-77)||(6186-6262)
scaffold0464 (32-76)||(6131-6175)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-76)||(1335-1410)
[»] scaffold0415 (1 HSPs)
scaffold0415 (2-65)||(13782-13845)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-76)||(231358-231433)
scaffold0011 (32-76)||(231303-231347)
[»] scaffold0650 (1 HSPs)
scaffold0650 (4-76)||(43-114)


Alignment Details
Target: chr6 (Bit Score: 178; Significance: 6e-96; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 96 - 345
Target Start/End: Original strand, 30434603 - 30434854
Alignment:
Q  96 gggtgattagggttgtaagcttagcgccaaaatgcattacgtggggtacgacttcaattagggttagggattacgggaaatcagaccacctttgattaat 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30434603 gggtgattagggttgtaagcttagcgccaaaatgcattacgtggggtagggcttcaattagggttaaggattacgggaaatcagaccacctttgattaat 30434702  T
Q  196 aagaagtaagataagattggtagctttgtcttaagatttaattggagcnnnnnnnnnnnnngggtcgactaccccttgtacttttttgtacttatctcct 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||             |||| ||||||||||||||||||||||||||| ||||||    
T  30434703 aagaagtaagataagattggtagctttgtcttaagatttaattggagcttttttcttttttgggttgactaccccttgtacttttttgtacttctctcct 30434802  T
Q  296 tttctaataata--ttttttccactaaaaacaaaacaatgataaaaaagaaa 345  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  30434803 tttctaataatattttttttccactagaaacaaaacaatgataaaaaagaaa 30434854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6330190 - 6330114
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6330190 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 6330114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2830410 - 2830335
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2830410 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8383024 - 8383099
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8383024 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9644771 - 9644696
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9644771 ctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9650788 - 9650713
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9650788 ctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 11572200 - 11572275
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11572200 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26602398 - 26602323
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26602398 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33052849 - 33052924
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33052849 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8099605 - 8099530
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8099605 ctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13853648 - 13853723
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  13853648 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 35031056 - 35031131
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  35031056 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6143629 - 6143554
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  6143629 ctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13043833 - 13043758
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13043833 ctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6068641 - 6068566
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||    
T  6068641 ctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagta 6068566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8417848 - 8417923
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||    
T  8417848 ctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagta 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 28747193 - 28747248
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaat 60  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  28747193 ttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 6068997 - 6069062
Alignment:
Q  3 agttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccgg 68  Q
    ||||||||||| || ||||||||||| | |||||||||||||||| ||| ||||||||||||||||    
T  6068997 agttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22896537 - 22896471
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||||| ||||    
T  22896537 ctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 35031047 - 35031001
Alignment:
Q  30 atttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  35031047 atttttgttgacccaaaattctcttataaataggaccggaggaagta 35031001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 2830421 - 2830466
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  2830421 ttttgttgacccaaaattctcttataaataggaccggagggagtag 2830466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 8383013 - 8382968
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  8383013 ttttgttgacccaaaattctcttataaataggaccggagggagtag 8382968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17992063 - 17992018
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaa 46  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||    
T  17992063 ctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 3788123 - 3788167
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||    
T  3788123 ttttgttgacctaaatttatcttataaataagaccggagggagta 3788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 6330201 - 6330245
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6330201 ttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 8099616 - 8099660
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  8099616 ttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 9644782 - 9644826
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9644782 ttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 9650799 - 9650843
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9650799 ttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 11572189 - 11572145
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11572189 ttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 12473691 - 12473651
Alignment:
Q  25 cattcatttttgttgacctaaatttctcttataaataggac 65  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  12473691 catttatttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 13853637 - 13853593
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13853637 ttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 26602409 - 26602453
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26602409 ttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  19 caaatacattcatttttgttgacctaaatttctcttata 57  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 17992072 - 17992118
Alignment:
Q  30 atttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  17992072 atttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 6068652 - 6068696
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||  ||| |||||||||||||||||||||||| ||||    
T  6068652 ttttgttgactcaaaattctcttataaataggaccggagggagta 6068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 8417837 - 8417793
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  8417837 ttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32211418 - 32211493
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32211418 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 54667 - 54742
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  54667 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2890217 - 2890292
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2890217 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3304333 - 3304408
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3304333 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6552730 - 6552655
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6552730 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7785833 - 7785908
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7785833 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7805754 - 7805829
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7805754 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12343195 - 12343270
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12343195 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32114530 - 32114605
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32114530 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43199409 - 43199484
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43199409 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44498242 - 44498317
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44498242 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31654688 - 31654611
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtagc 78  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  31654688 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtagc 31654611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12763709 - 12763784
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  12763709 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15888407 - 15888482
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15888407 ctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 25601055 - 25601130
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  25601055 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39571258 - 39571333
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  39571258 ctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7012246 - 7012171
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  7012246 ctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33289316 - 33289391
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||    
T  33289316 ctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 4245649 - 4245711
Alignment:
Q  14 cagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13578932 - 13578857
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| || ||||||||||    
T  13578932 ctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagta 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 28463679 - 28463614
Alignment:
Q  8 aaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggta 73  Q
    ||||||||||||||||||||  | ||||||||||| || |||||||||||||||||||||||||||    
T  28463679 aaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8587245 - 8587170
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| |||| ||||||||  | ||||||||||| || ||||||||||||||||||||||||| ||||    
T  8587245 ctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 27422266 - 27422320
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagta 27422320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  19 caaatacattcatttttgttgacctaaatttctcttataaataggaccgga 69  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 25601054 - 25601000
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||| | ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 32211409 - 32211363
Alignment:
Q  30 atttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32211409 atttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 54656 - 54612
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  54656 ttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 2890206 - 2890162
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2890206 ttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 6552741 - 6552785
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6552741 ttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 7785822 - 7785778
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7785822 ttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 33289305 - 33289261
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  33289305 ttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 39571247 - 39571203
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39571247 ttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 43199398 - 43199354
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  43199398 ttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 28999104 - 28999163
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 61  Q
    ||||||||||||||||| | ||||||  ||||||||||||| || ||||| |||||||||    
T  28999104 tagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaata 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 12343184 - 12343146
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggag 70  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  12343184 ttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 17006982 - 17006916
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    |||| ||||||||||| || |||  | ||||||||||| || |||||||||||||||||| ||||||    
T  17006982 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 17570265 - 17570331
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    |||| ||||||||||| || |||  | ||||||||||| || |||||||||||||||||| ||||||    
T  17570265 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 27422262 - 27422193
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||  |   ||||||||  || ||| ||||||||||||||||||||| ||||    
T  27422262 gttaaaaattcagtccaaatacatgaa---ttgttgactcaactttatcttataaataggaccggaggaagta 27422193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 32114521 - 32114475
Alignment:
Q  30 atttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  32114521 atttttgttgacccaaaattttcttataaataggaccggagggagta 32114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 3304322 - 3304277
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| || ||||||||||||||||||||| |||||    
T  3304322 ttttgttgacccaaaattttcttataaataggaccggagggagtag 3304277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 6899452 - 6899419
Alignment:
Q  43 taaatttctcttataaataggaccggaggtagta 76  Q
    ||||||| ||||||||||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagta 6899419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 7012257 - 7012301
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7012257 ttttgttgatccaaaattctcttataaataggaccggaggaagta 7012301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 7805743 - 7805699
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  7805743 ttttgctgacccaaaattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 12763698 - 12763654
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  12763698 ttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 24692040 - 24692096
Alignment:
Q  8 aaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagga 64  Q
    |||||||||| || ||||||  | |||||||||||||| ||| ||||||||||||||    
T  24692040 aaaattcagttcagatacatcaacttttgttgacctaactttttcttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 31654699 - 31654743
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31654699 ttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 44498231 - 44498187
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||    
T  44498231 ttttattgacccaaaattctcttataaataggaccggagggagta 44498187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23278056 - 23278131
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23278056 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 34042771 - 34042696
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34042771 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 39402021 - 39402097
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39402021 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 39402097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9981722 - 9981647
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9981722 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26471120 - 26471195
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26471120 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 27159413 - 27159488
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  27159413 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31842850 - 31842925
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31842850 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44668148 - 44668223
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44668148 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47216754 - 47216829
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47216754 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1050963 - 1050888
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1050963 ctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11796008 - 11795933
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11796008 ctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 14984912 - 14984837
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  14984912 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 14984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44955261 - 44955336
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  44955261 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47777536 - 47777611
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  47777536 ctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 12483684 - 12483758
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12483684 tagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 47588396 - 47588467
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||    
T  47588396 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47969770 - 47969700
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctc-ttataaataggaccggag 70  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  47969770 ctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 11897126 - 11897046
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtagcatttaa 84  Q
    |||||||||||||| || ||||||  | |||||||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  11897126 gttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtatcatttaa 11897046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17556828 - 17556752
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcat-ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||| |  |||||||||||||| |||||||||||||||||||| |||| ||||    
T  17556828 ctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagta 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25694394 - 25694331
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagga 64  Q
    ||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||    
T  25694394 ctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaatagga 25694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 12213530 - 12213604
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||| || ||||||||| ||||||||||||||||  |||||||||||||| ||| ||||| ||||    
T  12213530 tagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagta 12213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 37552217 - 37552263
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggaccgg 68  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccgg 37552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 16448170 - 16448238
Alignment:
Q  8 aaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| ||||||  | ||||||||||| || ||||||||||||||||||||||||| ||||    
T  16448170 aaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 11989853 - 11989796
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 61  Q
    ||||||||||||||||||||| |||  |||||||||||| || |||||||||||||||    
T  11989853 gttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 11897140 - 11897184
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  11897140 ttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 44955250 - 44955212
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggag 70  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  44955250 ttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 37552213 - 37552140
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||||||||| ||||||  | | ||||||||  || ||| ||||||||||||||||||||| |||||    
T  37552213 gttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagtag 37552140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 11796019 - 11796063
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11796019 ttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 12062635 - 12062679
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggacc 66  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 12483672 - 12483628
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12483672 ttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 14984923 - 14984967
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  14984923 ttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 17556839 - 17556883
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||    
T  17556839 ttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 25694405 - 25694449
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  25694405 ttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 27159402 - 27159358
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  27159402 ttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 31842839 - 31842795
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31842839 ttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 39402010 - 39401966
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39402010 ttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 44668137 - 44668093
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44668137 ttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 47777525 - 47777481
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47777525 ttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 9981733 - 9981772
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  9981733 ttttgttgacccaaaattctcttataaataggaccggagg 9981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 12043679 - 12043726
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggaccgga 69  Q
    ||||||| |||||||||||  ||||||| |||||||||||||||||||    
T  12043679 atacattaatttttgttgatttaaatttttcttataaataggaccgga 12043726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 11989853 - 11989911
Alignment:
Q  18 ccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||  |||||| |||||  |||||||| ||||||||||||||||||| ||||    
T  11989853 ccaaatacatcaatttttattgactcaaatttcttttataaataggaccggagggagta 11989911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 40676845 - 40676796
Alignment:
Q  20 aaatacattcatttttgttgacctaaatttctcttataaataggaccgga 69  Q
    |||||||| |||||||||||||| |||| | ||||||||||| |||||||    
T  40676845 aaatacatccatttttgttgaccaaaatgtttcttataaataagaccgga 40676796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 84
Target Start/End: Original strand, 43929469 - 43929502
Alignment:
Q  51 tcttataaataggaccggaggtagtagcatttaa 84  Q
    |||||||||||||||||||||||||| |||||||    
T  43929469 tcttataaataggaccggaggtagtatcatttaa 43929502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 47678371 - 47678404
Alignment:
Q  43 taaatttctcttataaataggaccggaggtagta 76  Q
    ||||||| ||||||||||||||||||||||||||    
T  47678371 taaatttttcttataaataggaccggaggtagta 47678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 1050978 - 1051018
Alignment:
Q  36 gttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||| ||| |||||||||||||||||||||||| ||||    
T  1050978 gttgacccaaaattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 26471109 - 26471065
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||    
T  26471109 ttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 34042782 - 34042826
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  34042782 ttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 39720779 - 39720815
Alignment:
Q  40 acctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||| | ||||||||||||||||||||||||||||    
T  39720779 acctaattgtctcttataaataggaccggaggtagta 39720815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 47216743 - 47216699
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  47216743 ttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 23314194 - 23314270
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23314194 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 23314270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1565784 - 1565859
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1565784 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1738502 - 1738577
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1738502 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7240824 - 7240749
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7240824 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 31319454 - 31319529
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31319454 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38063968 - 38064043
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38063968 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 46840935 - 46840860
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  46840935 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4790323 - 4790248
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4790323 ctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7482300 - 7482225
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7482300 ctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9268831 - 9268756
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  9268831 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28536806 - 28536881
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28536806 ctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 36583470 - 36583395
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36583470 ctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 94373 - 94448
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  94373 ctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 22285770 - 22285699
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  22285770 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 22285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 36016255 - 36016326
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  36016255 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38441535 - 38441460
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  38441535 ctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 40840175 - 40840243
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggag 70  Q
    ||||||||||||||||||||||||||| ||||||||| || ||| |||||||| |||||||||||||||    
T  40840175 tagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 33418447 - 33418392
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaat 60  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  33418447 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9575484 - 9575409
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||| |||||| || | ||||||||||| || ||||||||| |||||||||| |||| ||||    
T  9575484 ctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 7269463 - 7269536
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||||||  | ||||||  ||||||||||||| || ||| ||||||||||| ||||||||| |||||    
T  7269463 gttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagtag 7269536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 22285785 - 22285830
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  22285785 ttttgttgacccaaaattctcttataaataggaccggagggagtag 22285830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 1738491 - 1738447
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  1738491 ttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 7240835 - 7240879
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7240835 ttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 7482311 - 7482355
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7482311 ttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 9268842 - 9268886
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9268842 ttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 23314183 - 23314139
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314183 ttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 38441546 - 38441590
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38441546 ttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 46840946 - 46840990
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46840946 ttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 28322878 - 28322933
Alignment:
Q  152 attagggttagggattacgggaaatcagaccacctttgattaataagaagtaagat 207  Q
    ||||||||||||||||  |||||||||||||||||| |||| |||  |||||||||    
T  28322878 attagggttagggatttagggaaatcagaccaccttagatttatagtaagtaagat 28322933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 33418462 - 33418500
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggag 70  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  33418462 ttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 31319443 - 31319398
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  31319443 ttttgttgacccaaaattctcttataaatagaaccggagggagtag 31319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 40840163 - 40840126
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccgga 69  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  40840163 ttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 94362 - 94318
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  94362 ttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 4790334 - 4790378
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||    
T  4790334 ttttattgacccaaaattctcttataaataggaccggaggaagta 4790378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 9575495 - 9575539
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||    
T  9575495 ttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 36583481 - 36583525
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  36583481 ttttgttgacccaaaattctcttataaataggatcggagggagta 36583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 38063957 - 38063913
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| ||||||||||||||||||| |||| ||||    
T  38063957 ttttgttgacccaaaattctcttataaataggaccagagggagta 38063913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 12935 - 12860
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12935 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 12946 - 12990
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  12946 ttttgctgacccaaaattctcttataaataggaccggagggagta 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23860 - 23785
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23860 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 23871 - 23915
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  23871 ttttgttgacccaaaattttcttataaataggaccggagggagta 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9395425 - 9395350
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9395425 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37149010 - 37149085
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37149010 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 583064 - 582989
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  583064 ctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagta 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11795243 - 11795168
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  11795243 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 20848149 - 20848074
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  20848149 ctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23360017 - 23359942
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  23360017 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36563593 - 36563668
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  36563593 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41989462 - 41989537
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  41989462 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 13033122 - 13033051
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  13033122 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 13103095 - 13103024
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  13103095 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26350405 - 26350480
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||    
T  26350405 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37642029 - 37641953
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattca-tttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  37642029 ctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagta 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17025699 - 17025624
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  17025699 ctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 4444031 - 4443960
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  4444031 ttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagta 4443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 38361750 - 38361821
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||| |||||| ||||    
T  38361750 ttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagta 38361821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6126899 - 6126845
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctctta 55  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  6126899 ctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13539922 - 13539986
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccgga 69  Q
    |||||||||||||||||| ||||    | ||||||||||||||||||||||||||||||||||||||||    
T  13539922 ctagttaaaaattcagtctaaat----ttatttttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 21576017 - 21575970
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctc 52  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  21576017 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 6126910 - 6126962
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtagcatttaa 84  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  6126910 ttttgttgacccaaaattctcttataaataggaccggagggagtagcatttaa 6126962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    ||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 11574164 - 11574204
Alignment:
Q  30 atttttgttgacctaaatttctcttataaataggaccggag 70  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  11574164 atttttgttgacctaaatgtctcttataaataggaccggag 11574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 23360028 - 23360072
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  23360028 ttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 9395436 - 9395480
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9395436 ttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 13103110 - 13103154
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13103110 ttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 17025710 - 17025754
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  17025710 ttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 36563582 - 36563538
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  36563582 ttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 41989451 - 41989407
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41989451 ttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 39290845 - 39290775
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||| | |||||||||||  |||||||||||||| |  ||||||||| |||||||||||||| ||||    
T  39290845 ttaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 3549605 - 3549663
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatag 62  Q
    |||||||||| || ||| ||||||| ||||||||||||  |||| ||||||||||||||    
T  3549605 gttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 36595820 - 36595782
Alignment:
Q  30 atttttgttgacctaaatttctcttataaataggaccgg 68  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  36595820 atttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 11795254 - 11795298
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  11795254 ttttgttgacccaaaattctcttataaataggactggagggagta 11795298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 13033137 - 13033181
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  13033137 ttttgttgacccaaaattctcttataaataggatcggagggagta 13033181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 21576032 - 21576076
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||    
T  21576032 ttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 37148999 - 37148955
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  37148999 ttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 37642040 - 37642084
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||    
T  37642040 ttttattgacccaaaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3372196 - 3372121
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3372196 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 20538741 - 20538816
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20538741 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24704445 - 24704370
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24704445 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 47833686 - 47833611
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47833686 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48336338 - 48336263
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48336338 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 53337445 - 53337370
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  53337445 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 46797800 - 46797724
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  46797800 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagtag 46797724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3993051 - 3992976
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  3993051 ctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6121948 - 6122023
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  6121948 ctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 26231652 - 26231577
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  26231652 ctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagta 26231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33551276 - 33551201
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33551276 ctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42797807 - 42797732
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  42797807 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 3904739 - 3904813
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  3904739 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7579385 - 7579310
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  7579385 ctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 43900624 - 43900549
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||    
T  43900624 ctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47838672 - 47838747
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||    
T  47838672 ctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 52756750 - 52756675
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||    
T  52756750 ctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 40913246 - 40913319
Alignment:
Q  3 agttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  40913246 agttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 51894640 - 51894712
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  51894640 gttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 33621871 - 33621796
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||    
T  33621871 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagta 33621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 5986950 - 5986876
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||||    
T  5986950 tagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 41469825 - 41469896
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||| ||||    
T  41469825 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3422135 - 3422073
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagga 64  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  3422135 ctagttaaaaattcagttcaaatacattcatttt-gttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 29845719 - 29845656
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 65  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  29845719 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 41615732 - 41615794
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagga 64  Q
    |||||||||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||    
T  41615732 tagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 25855155 - 25855083
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||| | ||||||||||  || ||||||| |||||||||||| |||| ||||    
T  25855155 gttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagta 25855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 4780371 - 4780426
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||| | ||||||||||| |||||||||||||||||||||||||||| |||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagtag 4780426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 3904739 - 3904683
Alignment:
Q  20 aaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3904739 aaatacatcaatttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 42797818 - 42797862
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  42797818 ttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 17236845 - 17236912
Alignment:
Q  4 gttaaaaattcagtccaaa-tacattcatttttgttgacctaaatttctcttataaataggaccggag 70  Q
    ||||||||||||||| ||| |||||  | ||||||||||| |||||| ||||||||||||||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 3422146 - 3422190
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3422146 ttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 6121937 - 6121893
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6121937 ttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaatag 62  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 41469810 - 41469766
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41469810 ttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 46797811 - 46797855
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46797811 ttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 47833697 - 47833741
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47833697 ttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 47838661 - 47838617
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47838661 ttttgttgaccaaaaattctcttataaataggaccggagggagta 47838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 51894626 - 51894582
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51894626 ttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 40913233 - 40913194
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    ||||||||| | ||||||||||||||||||||||||||||    
T  40913233 ttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 5986962 - 5987000
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggag 70  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  5986962 ttttgttgacccaaaattctcttataaataggaccggag 5987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 24704446 - 24704500
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||| | ||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagta 24704500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 3372207 - 3372252
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| || ||||||||||||||||||||| |||||    
T  3372207 ttttgttgacccaaaattatcttataaataggaccggagggagtag 3372252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 7579396 - 7579441
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  7579396 ttttgttgacccaaaattctcttataaatagaaccggaggaagtag 7579441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 17344284 - 17344219
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggag 70  Q
    ||||||||||||| || ||||||  | |||||||||  ||| |||||||||||||||| |||||||    
T  17344284 ttaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 44900124 - 44900079
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    |||||||||||  ||| ||||||||||||||||||||||| |||||    
T  44900124 ttttgttgaccagaatatctcttataaataggaccggagggagtag 44900079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 50430476 - 50430533
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 61  Q
    |||||||||||| |||||||||||  | ||||||||||| || || ||||||||||||    
T  50430476 gttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 3993062 - 3993106
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  3993062 ttttgttgacccaaaattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21636196 - 21636248
Alignment:
Q  19 caaatacattcatttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    |||||||||| |||||||||||   |||| |||||||||||||| ||||||||    
T  21636196 caaatacattaatttttgttgattcaaatgtctcttataaatagaaccggagg 21636248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 33621882 - 33621926
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  33621882 ttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 38160418 - 38160378
Alignment:
Q  30 atttttgttgacctaaatttctcttataaataggaccggag 70  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  38160418 atttttgttgacctaaatctctcttataaatatgactggag 38160378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 43900635 - 43900679
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  43900635 ttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 48336349 - 48336393
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  48336349 ttttgttgacccaaaattttcttataaataggaccggagggagta 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 53337456 - 53337500
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||| |||||| ||| |||||||||||||||||||||||| ||||    
T  53337456 ttttattgacccaaaattctcttataaataggaccggagggagta 53337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4238669 - 4238594
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4238669 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10298054 - 10297979
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10298054 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 19557107 - 19557182
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19557107 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22722006 - 22721931
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22722006 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44785451 - 44785526
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44785451 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49823436 - 49823511
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49823436 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 34080088 - 34080160
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34080088 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37508996 - 37508920
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  37508996 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtag 37508920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2787887 - 2787962
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  2787887 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 2787962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 8437500 - 8437425
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  8437500 ctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8817441 - 8817516
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  8817441 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 17653787 - 17653712
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  17653787 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 21295385 - 21295456
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21295385 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38964467 - 38964392
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  38964467 ctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48340472 - 48340397
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  48340472 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 51406748 - 51406673
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  51406748 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9111549 - 9111624
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  9111549 ctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35513548 - 35513473
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  35513548 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36095735 - 36095810
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  36095735 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40691051 - 40691126
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  40691051 ctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagta 40691126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 42507410 - 42507485
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  42507410 ctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 46208101 - 46208030
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  46208101 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 42170404 - 42170476
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  42170404 gttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6013391 - 6013461
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||    
T  6013391 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33942987 - 33943055
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccgga 69  Q
    |||||||||||||||||||||||||||| | |||||||||||||| ||||| |||||||||||| ||||    
T  33942987 ctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 9213588 - 9213646
Alignment:
Q  18 ccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 4238680 - 4238733
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtagcatttaag 85  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||| ||||    
T  4238680 ttttgttgaccaaaaattctcttataaataggaccggaggtagtatcatgtaag 4238733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 17653798 - 17653842
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  17653798 ttttgttgacccaaaattctcttataaataggaccggaggtagta 17653842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 21295370 - 21295326
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  21295370 ttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 37509007 - 37509051
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  37509007 ttttgttgacccaaaattctcttataaataggaccggaggtagta 37509051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 46208116 - 46208160
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||    
T  46208116 ttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 51406757 - 51406803
Alignment:
Q  30 atttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51406757 atttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 19557096 - 19557051
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  19557096 ttttgttgacccaaaattctcttataaataggaccggagggagtag 19557051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  21 aatacattcatttttgttgacctaaatttctcttataaataggaccggag 70  Q
    |||||||| | ||||||||||||||||||||||||||| |||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 34080074 - 34080029
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  34080074 ttttgttgacccaaaattctcttataaataggaccggagggagtag 34080029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 6013380 - 6013336
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6013380 ttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 10298065 - 10298109
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  10298065 ttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 38964478 - 38964522
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38964478 ttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 40691040 - 40690996
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  40691040 ttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 48340483 - 48340527
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  48340483 ttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 49823425 - 49823381
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49823425 ttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 9111538 - 9111499
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  9111538 ttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 42507399 - 42507360
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggagg 71  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  42507399 ttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 45652123 - 45652069
Alignment:
Q  22 atacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||| |||||||||||||  |||| ||||||||||||||||| ||||| ||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggagggagta 45652069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 2787876 - 2787831
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||| ||||| ||| |||||||||||||||||||||||| |||||    
T  2787876 ttttgctgacccaaaattctcttataaataggaccggagggagtag 2787831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 8817430 - 8817393
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccgga 69  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  8817430 ttttgttgacccaaaattctcttataaataggaccgga 8817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 22722017 - 22722054
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccgga 69  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  22722017 ttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 44785440 - 44785395
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  44785440 ttttgttgacccaaaattctcttataaatagaaccggaggaagtag 44785395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 8437511 - 8437555
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||  ||| |||||||||||||||||||||||| ||||    
T  8437511 ttttgttgactcaaaattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 9027186 - 9027142
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| || ||| ||||||||||||||||||||| ||||    
T  9027186 ttttgttgacccaactttatcttataaataggaccggagggagta 9027142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 43323132 - 43323072
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagga 64  Q
    |||||||||| | |||||||||||  | ||||||||||| || ||| ||||||||||||||    
T  43323132 gttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3055633 - 3055558
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3055633 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 4683987 - 4684062
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4683987 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6648574 - 6648649
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6648574 ctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13197765 - 13197840
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13197765 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13344559 - 13344484
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13344559 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13344484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15896917 - 15896842
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15896917 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15896842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37990068 - 37990143
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37990068 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37990143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41478694 - 41478769
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41478694 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 41478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44397622 - 44397547
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44397622 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44398761 - 44398686
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44398761 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44398686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 37666665 - 37666741
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  37666665 ctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 37666741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12337992 - 12338067
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  12337992 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16044372 - 16044447
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16044372 ctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16243838 - 16243913
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  16243838 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagta 16243913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 38917577 - 38917652
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||    
T  38917577 ctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagta 38917652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 30099241 - 30099310
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtag 74  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30099241 ttaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 15372298 - 15372226
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||    
T  15372298 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagta 15372226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9047810 - 9047885
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||| |||||    
T  9047810 ctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagta 9047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41492951 - 41493015
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 65  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  41492951 ctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 12170455 - 12170529
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||| | |||| ||||||||| |||||||| ||||||||| |||||| ||||    
T  12170455 tagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44804633 - 44804680
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatt 48  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44804633 ctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31150728 - 31150659
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggag 70  Q
    ||||||||||||| |||||||||||||  | ||||||||||  || |||||||||||||||||| |||||    
T  31150728 ctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  5 ttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaata 61  Q
    ||||||||||| |||||||||||  ||||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 41492940 - 41492896
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  41492940 ttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 13197754 - 13197704
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagtagcattt 82  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||| ||||    
T  13197754 ttttgttgacccaaaattctcttataaataggaccggagggagtagtattt 13197704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 3055644 - 3055688
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3055644 ttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 6648563 - 6648519
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6648563 ttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 9047799 - 9047755
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9047799 ttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 12337981 - 12337937
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12337981 ttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 15372312 - 15372356
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15372312 ttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 15896928 - 15896972
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15896928 ttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 37990057 - 37990013
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37990057 ttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 38917566 - 38917522
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38917566 ttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 41478683 - 41478639
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41478683 ttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 44398772 - 44398816
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44398772 ttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  18 ccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||  | ||||||||||||| || |||||| |||||||||||||||| ||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 16243827 - 16243790
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccgga 69  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  16243827 ttttgttgacccaaaattctcttataaataggaccgga 16243790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 16734855 - 16734802
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttata 57  Q
    ||||||||||||||||| ||||||  | ||||||||||| || |||||||||||    
T  16734855 gttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 41453131 - 41453090
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaa 45  Q
    ||||||||||||||||||||||||| | |||| |||||||||    
T  41453131 gttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 13344570 - 13344614
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||| | ||| |||||||||||||||||||||||| ||||    
T  13344570 ttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 16044357 - 16044317
Alignment:
Q  36 gttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||| ||| |||||||||||||||||||||||| ||||    
T  16044357 gttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 30099226 - 30099182
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  30099226 ttttgttgacccaaaattctctaataaataggaccggagggagta 30099182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 37666650 - 37666610
Alignment:
Q  36 gttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||| ||| |||||||||||||||||||||||| ||||    
T  37666650 gttgacccaaaattctcttataaataggaccggagggagta 37666610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 44397633 - 44397669
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccgg 68  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  44397633 ttttgttgacccaaaattctcttataaataggaccgg 44397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 49579 - 49505
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  49579 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 49591 - 49635
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49591 ttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 6186 - 6262
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtag 77  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6186 ctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 6262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 6175 - 6131
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  6175 ttttgttgacccaaaattttcttataaataggaccggagggagta 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1410 - 1335
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  1410 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagta 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 13782 - 13845
Alignment:
Q  2 tagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 65  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||    
T  13782 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 231358 - 231433
Alignment:
Q  1 ctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||| ||||||||||||| ||||||  | ||||||||| | || |||||||||||| ||||| |||||| ||||    
T  231358 ctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 231347 - 231303
Alignment:
Q  32 ttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    ||||||||||||||  ||||| |||||||||||||||||| ||||    
T  231347 ttttgttgacctaatattctcctataaataggaccggagggagta 231303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 43 - 114
Alignment:
Q  4 gttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 76  Q
    |||||||||| |||||||||||||  | ||||||||||| |  |||||| ||||||||| |||||||| ||||    
T  43 gttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagta 114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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