View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16240_high_64 (Length: 247)
Name: NF16240_high_64
Description: NF16240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16240_high_64 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 232
Target Start/End: Original strand, 7494095 - 7494317
Alignment:
| Q |
10 |
aagaaaataaggacataaaaaacatagatgccaccaaagctcctataagccttattgaccaaatgatacttccaacgcctaagagcaaaagaagattgaa |
109 |
Q |
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| T |
7494095 |
aagaaaaaaaggacataaaaaacatagatgccaccaaagctcttataagccttattgaccaaatgatacttccaacgcctaagagcaaaagaagattgaa |
7494194 |
T |
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| Q |
110 |
ctgcaacaatttgccttaccactcctcaataaatgagaaaacatggcttactgcaaactcactttcccgctactctgtcaactctgcaactgatgccacc |
209 |
Q |
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|||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7494195 |
ctgcaacaatttaccttaccactccacaataaatgagaaaacatggcttactacaaactcactttcccgctactctgtcaactctgcaactgatgccacc |
7494294 |
T |
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| Q |
210 |
acatcaattattcaagaaaaaat |
232 |
Q |
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||||||||||||||||||||||| |
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| T |
7494295 |
acatcaattattcaagaaaaaat |
7494317 |
T |
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