View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16241_high_6 (Length: 304)
Name: NF16241_high_6
Description: NF16241
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16241_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 19 - 296
Target Start/End: Original strand, 31390716 - 31390993
Alignment:
| Q |
19 |
gcatttgaccctcttgatggttcaagcatagtagacacaaatttcacagtaggcaccatctttggtgtatggcctggtgataagttgattggagtaacag |
118 |
Q |
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| T |
31390716 |
gcatttgaccctcttgatggttcaagcatagtagacacaaatttcacagtaggcaccatctttggtgtatggcctggtgataagttgattggagtaacag |
31390815 |
T |
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| Q |
119 |
gaagagatcaagttgctgcagctatgggagttttaggtcctagaaccacttatgtacttgcacttaaggacttccccggcactcatgaatttctacttct |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31390816 |
gaagagatcaagttgctgcagctatgggagttttaggtcctagaaccacttatgtacttgcacttaaggacttccccggcactcatgaatttctacttct |
31390915 |
T |
|
| Q |
219 |
tgatgaaggtaacattgatgtcataagatttatgagattctaataaggtagctatttcactttatgatatgttcattt |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31390916 |
tgatgaaggtaacattgatgtcataagatttatgagattctaataaggtagctatttcactttatgatatgttcattt |
31390993 |
T |
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