View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16244_high_21 (Length: 285)

Name: NF16244_high_21
Description: NF16244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16244_high_21
NF16244_high_21
[»] chr5 (31 HSPs)
chr5 (1-169)||(2193726-2193894)
chr5 (1-169)||(34867700-34867868)
chr5 (1-171)||(20039542-20039712)
chr5 (1-170)||(34371521-34371690)
chr5 (1-170)||(42788714-42788882)
chr5 (1-169)||(39146849-39147017)
chr5 (1-170)||(17445523-17445692)
chr5 (17-169)||(15513097-15513249)
chr5 (1-169)||(21886214-21886382)
chr5 (1-169)||(34371978-34372146)
chr5 (1-169)||(10927014-10927183)
chr5 (1-169)||(27646903-27647072)
chr5 (30-169)||(18304341-18304480)
chr5 (1-157)||(10927471-10927628)
chr5 (16-170)||(1879990-1880144)
chr5 (10-69)||(29680177-29680236)
chr5 (1-71)||(189076-189146)
chr5 (3-69)||(8642104-8642170)
chr5 (1-71)||(22556544-22556614)
chr5 (1-84)||(8391389-8391472)
chr5 (48-170)||(5067006-5067127)
chr5 (1-71)||(22975078-22975148)
chr5 (89-169)||(11757389-11757470)
chr5 (1-71)||(22556977-22557047)
chr5 (10-71)||(3887134-3887195)
chr5 (123-170)||(8391477-8391524)
chr5 (1-68)||(16370776-16370843)
chr5 (1-71)||(1821914-1821984)
chr5 (1-71)||(2473967-2474037)
chr5 (1-71)||(11160749-11160819)
chr5 (89-158)||(4658148-4658217)
[»] chr7 (38 HSPs)
chr7 (1-169)||(34405659-34405827)
chr7 (1-168)||(36422163-36422330)
chr7 (1-169)||(2611720-2611888)
chr7 (1-169)||(2189054-2189222)
chr7 (1-170)||(3305380-3305549)
chr7 (1-170)||(26957625-26957794)
chr7 (34-170)||(2463551-2463687)
chr7 (1-169)||(679727-679895)
chr7 (1-169)||(6747666-6747834)
chr7 (37-169)||(10430673-10430805)
chr7 (1-169)||(43233323-43233491)
chr7 (5-142)||(28495791-28495928)
chr7 (1-169)||(35474189-35474357)
chr7 (5-169)||(42515455-42515618)
chr7 (1-126)||(2193209-2193334)
chr7 (1-161)||(35527189-35527348)
chr7 (1-170)||(29357524-29357692)
chr7 (1-113)||(28495676-28495788)
chr7 (1-169)||(16811914-16812074)
chr7 (1-145)||(6719142-6719275)
chr7 (1-115)||(46425705-46425819)
chr7 (5-126)||(22529307-22529428)
chr7 (1-169)||(29039088-29039248)
chr7 (185-261)||(28754637-28754712)
chr7 (179-278)||(22377489-22377587)
chr7 (1-71)||(13125204-13125274)
chr7 (171-237)||(15132615-15132681)
chr7 (1-70)||(13124769-13124838)
chr7 (122-169)||(2189510-2189557)
chr7 (1-54)||(2465949-2466002)
chr7 (1-69)||(2941825-2941893)
chr7 (1-168)||(36015479-36015646)
chr7 (1-71)||(11517457-11517526)
chr7 (98-172)||(16812141-16812215)
chr7 (171-225)||(29758364-29758418)
chr7 (1-71)||(42515100-42515170)
chr7 (206-278)||(7360414-7360486)
chr7 (121-158)||(31744013-31744050)
[»] chr3 (38 HSPs)
chr3 (1-167)||(50347658-50347824)
chr3 (1-169)||(11180102-11180269)
chr3 (1-169)||(13150167-13150334)
chr3 (1-169)||(16811291-16811459)
chr3 (1-170)||(39653073-39653242)
chr3 (1-156)||(32227289-32227444)
chr3 (1-169)||(28561656-28561824)
chr3 (1-164)||(16810840-16811003)
chr3 (1-169)||(37044944-37045113)
chr3 (1-127)||(32227453-32227578)
chr3 (1-170)||(14813858-14814027)
chr3 (1-143)||(25230773-25230915)
chr3 (1-143)||(25238360-25238502)
chr3 (3-132)||(25230318-25230447)
chr3 (3-132)||(25237905-25238034)
chr3 (31-171)||(13155302-13155439)
chr3 (3-158)||(30529608-30529763)
chr3 (1-144)||(20885185-20885327)
chr3 (1-170)||(32797003-32797171)
chr3 (82-169)||(39653530-39653617)
chr3 (21-169)||(2911005-2911153)
chr3 (1-169)||(25803072-25803240)
chr3 (1-126)||(14820107-14820232)
chr3 (1-141)||(39640875-39641015)
chr3 (3-109)||(25239147-25239253)
chr3 (120-166)||(14814318-14814364)
chr3 (111-169)||(25238849-25238907)
chr3 (89-171)||(970874-970956)
chr3 (1-71)||(31284344-31284414)
chr3 (1-158)||(29224245-29224402)
chr3 (1-71)||(8067288-8067358)
chr3 (1-70)||(27187398-27187467)
chr3 (3-71)||(7477199-7477267)
chr3 (171-219)||(38191206-38191254)
chr3 (4-169)||(25802619-25802792)
chr3 (1-71)||(25248119-25248189)
chr3 (1-71)||(41472309-41472378)
chr3 (3-71)||(7493889-7493957)
[»] chr8 (32 HSPs)
chr8 (1-170)||(12827322-12827491)
chr8 (1-170)||(27022406-27022575)
chr8 (1-169)||(10844793-10844961)
chr8 (1-169)||(27925809-27925977)
chr8 (1-169)||(22026289-22026457)
chr8 (1-169)||(22549063-22549231)
chr8 (1-169)||(32292307-32292475)
chr8 (1-170)||(8080410-8080579)
chr8 (1-171)||(41659173-41659342)
chr8 (1-169)||(22548617-22548785)
chr8 (1-169)||(6464978-6465146)
chr8 (1-161)||(27021947-27022111)
chr8 (1-169)||(22840597-22840765)
chr8 (1-169)||(28375122-28375290)
chr8 (1-169)||(28453249-28453416)
chr8 (1-169)||(33852326-33852493)
chr8 (1-169)||(2043965-2044136)
chr8 (171-278)||(8119112-8119218)
chr8 (1-161)||(29971469-29971629)
chr8 (1-72)||(10844683-10844754)
chr8 (106-168)||(25307676-25307738)
chr8 (1-70)||(22705181-22705250)
chr8 (1-69)||(25147977-25148045)
chr8 (1-80)||(25147535-25147614)
chr8 (1-71)||(17103089-17103159)
chr8 (1-158)||(1296929-1297085)
chr8 (235-278)||(15037032-15037075)
chr8 (5-71)||(34309011-34309077)
chr8 (1-46)||(3744671-3744716)
chr8 (1-69)||(27819314-27819382)
chr8 (48-160)||(30527594-30527706)
chr8 (1-53)||(41912996-41913048)
[»] chr2 (30 HSPs)
chr2 (1-169)||(8256436-8256604)
chr2 (1-170)||(29804591-29804760)
chr2 (1-171)||(25434124-25434294)
chr2 (1-170)||(25338065-25338234)
chr2 (1-169)||(33174868-33175036)
chr2 (1-169)||(41754199-41754367)
chr2 (1-165)||(18447986-18448150)
chr2 (1-170)||(18098946-18099116)
chr2 (1-169)||(27882994-27883162)
chr2 (50-169)||(33770920-33771039)
chr2 (1-166)||(1706955-1707119)
chr2 (1-169)||(33174415-33174581)
chr2 (39-169)||(18098667-18098798)
chr2 (1-170)||(15619807-15619976)
chr2 (1-169)||(16379302-16379471)
chr2 (49-170)||(15639649-15639770)
chr2 (21-169)||(1912434-1912583)
chr2 (1-169)||(38898980-38899148)
chr2 (1-71)||(30966242-30966312)
chr2 (1-71)||(24818334-24818404)
chr2 (109-169)||(20179098-20179158)
chr2 (11-101)||(11388167-11388256)
chr2 (1-71)||(30966698-30966768)
chr2 (1-157)||(16378859-16379015)
chr2 (1-71)||(29259688-29259758)
chr2 (229-277)||(14739392-14739440)
chr2 (1-84)||(1953150-1953233)
chr2 (240-278)||(25528378-25528416)
chr2 (11-60)||(11394554-11394603)
chr2 (1-41)||(20502061-20502101)
[»] chr1 (35 HSPs)
chr1 (1-172)||(16452001-16452172)
chr1 (1-172)||(16461154-16461325)
chr1 (1-169)||(20054148-20054316)
chr1 (1-169)||(20054604-20054772)
chr1 (1-169)||(20055060-20055228)
chr1 (1-169)||(20055516-20055684)
chr1 (1-169)||(20055972-20056140)
chr1 (1-169)||(20056428-20056596)
chr1 (1-169)||(20057331-20057499)
chr1 (1-169)||(52250116-52250284)
chr1 (1-169)||(38340816-38340984)
chr1 (1-169)||(20845729-20845897)
chr1 (1-169)||(43057591-43057759)
chr1 (1-169)||(20057787-20057955)
chr1 (1-169)||(20056884-20057043)
chr1 (1-169)||(43057133-43057300)
chr1 (3-169)||(31822733-31822899)
chr1 (1-169)||(51372942-51373110)
chr1 (1-165)||(12883438-12883602)
chr1 (1-169)||(50003143-50003311)
chr1 (1-128)||(50002775-50002902)
chr1 (1-170)||(30873018-30873188)
chr1 (1-169)||(7548003-7548169)
chr1 (1-170)||(10820501-10820670)
chr1 (177-280)||(30420016-30420119)
chr1 (1-87)||(50002353-50002439)
chr1 (1-71)||(35759676-35759746)
chr1 (1-71)||(35760982-35761052)
chr1 (1-69)||(20061259-20061327)
chr1 (133-172)||(9189349-9189388)
chr1 (2-70)||(23180739-23180807)
chr1 (103-171)||(67900-67968)
chr1 (1-68)||(12728002-12728069)
chr1 (1-43)||(2328351-2328393)
chr1 (125-169)||(50002443-50002487)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-169)||(154668-154835)
scaffold0002 (31-171)||(151549-151686)
[»] chr4 (40 HSPs)
chr4 (1-169)||(12692061-12692229)
chr4 (1-169)||(1645811-1645979)
chr4 (1-169)||(4127499-4127668)
chr4 (1-169)||(50398600-50398768)
chr4 (1-169)||(4127951-4128120)
chr4 (1-169)||(3169116-3169284)
chr4 (1-169)||(23942851-23943016)
chr4 (1-170)||(29628729-29628898)
chr4 (1-169)||(24629495-24629662)
chr4 (1-171)||(21220393-21220564)
chr4 (1-167)||(24629039-24629208)
chr4 (1-141)||(53996177-53996317)
chr4 (1-167)||(51331343-51331509)
chr4 (1-169)||(9423920-9424088)
chr4 (1-172)||(50399055-50399226)
chr4 (12-169)||(14351705-14351862)
chr4 (1-71)||(14572212-14572282)
chr4 (1-169)||(21067648-21067812)
chr4 (1-125)||(53854869-53854993)
chr4 (1-169)||(8467862-8468029)
chr4 (16-158)||(21067203-21067345)
chr4 (1-170)||(31817914-31818083)
chr4 (49-165)||(23943348-23943464)
chr4 (1-169)||(27026414-27026581)
chr4 (1-63)||(7678684-7678746)
chr4 (96-158)||(31817555-31817617)
chr4 (1-71)||(35871636-35871706)
chr4 (171-222)||(18418560-18418611)
chr4 (1-80)||(49998635-49998714)
chr4 (1-169)||(1464057-1464225)
chr4 (10-69)||(15306168-15306227)
chr4 (106-169)||(27029188-27029251)
chr4 (1-71)||(23350345-23350415)
chr4 (1-71)||(44471387-44471457)
chr4 (106-158)||(39180716-39180768)
chr4 (118-169)||(10165873-10165924)
chr4 (1-68)||(14571783-14571850)
chr4 (15-84)||(20309594-20309663)
chr4 (30-142)||(33987162-33987274)
chr4 (3-71)||(45682211-45682279)
[»] chr6 (35 HSPs)
chr6 (1-167)||(3652398-3652564)
chr6 (1-169)||(20850231-20850399)
chr6 (1-168)||(23986385-23986552)
chr6 (1-169)||(2681284-2681452)
chr6 (10-169)||(3652889-3653048)
chr6 (171-278)||(8068360-8068467)
chr6 (1-170)||(14771787-14771956)
chr6 (1-169)||(6330980-6331148)
chr6 (1-170)||(2720632-2720801)
chr6 (1-169)||(20896756-20896924)
chr6 (1-169)||(21311881-21312049)
chr6 (5-169)||(11062196-11062359)
chr6 (4-168)||(23776352-23776516)
chr6 (4-169)||(20126253-20126418)
chr6 (1-169)||(2890907-2891073)
chr6 (32-170)||(17850827-17850965)
chr6 (1-132)||(27334108-27334239)
chr6 (1-132)||(27394848-27394979)
chr6 (10-167)||(17851286-17851443)
chr6 (3-101)||(31821762-31821860)
chr6 (1-170)||(21311423-21311593)
chr6 (1-167)||(15929111-15929277)
chr6 (3-169)||(15929492-15929658)
chr6 (1-170)||(33775072-33775241)
chr6 (1-80)||(13191581-13191660)
chr6 (1-80)||(17027599-17027678)
chr6 (1-71)||(16519976-16520046)
chr6 (1-154)||(20735621-20735773)
chr6 (1-71)||(9440496-9440566)
chr6 (1-71)||(17731181-17731251)
chr6 (1-71)||(13492797-13492867)
chr6 (1-71)||(7911886-7911956)
chr6 (17-71)||(7912318-7912372)
chr6 (10-68)||(9352073-9352131)
chr6 (1-71)||(9440377-9440447)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-169)||(1130-1298)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-170)||(2651-2820)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-170)||(4470-4639)
scaffold0333 (15-169)||(4926-5080)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-169)||(23583-23751)
[»] scaffold0047 (3 HSPs)
scaffold0047 (1-169)||(18202-18371)
scaffold0047 (1-144)||(17666-17809)
scaffold0047 (74-169)||(17820-17916)
[»] scaffold0557 (1 HSPs)
scaffold0557 (29-169)||(660-800)
[»] scaffold0442 (1 HSPs)
scaffold0442 (36-169)||(2414-2548)
[»] scaffold0005 (2 HSPs)
scaffold0005 (1-71)||(245094-245164)
scaffold0005 (1-68)||(245526-245593)
[»] scaffold0322 (2 HSPs)
scaffold0322 (1-80)||(18965-19044)
scaffold0322 (15-71)||(18203-18259)
[»] scaffold0664 (1 HSPs)
scaffold0664 (1-167)||(4050-4207)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-71)||(2278-2348)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-71)||(107531-107601)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-71)||(10308-10378)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-71)||(142342-142412)
[»] scaffold0499 (1 HSPs)
scaffold0499 (1-86)||(2119-2204)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-80)||(105719-105798)
scaffold0024 (134-169)||(105654-105689)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-71)||(162746-162816)
[»] scaffold0391 (1 HSPs)
scaffold0391 (101-158)||(14663-14720)


Alignment Details
Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 2193894 - 2193726
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  2193894 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcatgatccctctcattccggcgtgattcggttcctctagaagctgtcg 2193795  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2193794 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 2193726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 34867868 - 34867700
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||| | |||||||||||     
T  34867868 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcttctagaagctgtca 34867769  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  34867768 ggagccgctcattgtcgtgccttgtgcaccggcgactactcctcgccctcgtcagccttgggtgttaca 34867700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 20039542 - 20039712
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||| | ||||||| ||||||||| ||||||| ||||||||||||||||  |||||| ||||  | ||||||||||||    
T  20039542 acaattcttataagccttccttcaactatgtagtcctatacctacacggcctcatgatccctctcattccgatgtgattcggtttgtctagaagctgtcg 20039641  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaaa 171  Q
    ||||  |||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  20039642 ggagctgctcattgtcatgccttgtgcaccggcgaccattccccgccctcgtcagccttgggtgttacaaa 20039712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 34371690 - 34371521
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    ||||||||  ||||| |||||||||||| | ||||||| ||||  | |||||  ||| |||||||||||||| |||||| ||||||| |||||||||||     
T  34371690 acaattcttttaagcattccttcaaccatgcagtcccacacctgtacggccttgggaaccctctcattccggtgtgattcggttcctctagaagctgtca 34371591  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34371590 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttacaa 34371521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 42788714 - 42788882
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| |||| |||||||| |||||||||  |||||| ||||||||||||||||||||||||  |||||| ||||||| |||||| |||||    
T  42788714 acaattcttataagtcttctttcaaccatgtagtcccaatcctacacggcctcaggatccctctcattccgttgtgattcggttcctctagaagttgtcg 42788813  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
     ||| |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42788814 agagccgctca-tgttgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttacaa 42788882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39147017 - 39146849
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| || |||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||  ||||||  |||||| |||||| ||||     
T  39147017 acaattcttataagtctaccttcaaccatgtagtcccatacctacacggcctcatgatccctctcatttcgatgtgattcagttcctctagaagttgtca 39146918  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  39146917 ggagccgctcattgtcgtgccttgtgcaccggcgatcactccccaccctcgtcagccttgggtgttaca 39146849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 17445523 - 17445692
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||  |||||| ||||||| |||||| ||| |    
T  17445523 acaattcttataagccttccttcaaccatgtagtcccatgcctacacggcctcaggatccctctcatttcgatgtgattcggttcctctagaagttgttg 17445622  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||| | ||||||||||||||  |||||||||||| ||| || |||||||||||||||||    
T  17445623 ggagccgctcattgccatgccttgtgcaccgtcgaccactccccgtccttgttagccttgggtgttacaa 17445692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 169
Target Start/End: Original strand, 15513097 - 15513249
Alignment:
Q  17 ttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtc 116  Q
    |||||||||||| |||||||||||||||||  |||| | ||||||||||||||||  |||||| ||||||| || || |||||||||| |||||||| ||    
T  15513097 ttccttcaaccatgtagtcccatacctacacagcctaatgatccctctcattccgatgtgattcggttcctctaaaaactgtcgggagccgctcattatc 15513196  T
Q  117 gtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  15513197 gtgccttgtgcaccggcgaccactccccgtcctcgtcagccttgggtgttaca 15513249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 21886214 - 21886382
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| ||   |||||||| |||||||||||||| |||||| ||||||| ||||||||  |     
T  21886214 acaattcttataagccttccttcaaccatgcagtcccatacctgcacaacctcaggaaccctctcattccggtgtgattcggttcctctagaagctacca 21886313  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||    
T  21886314 ggagccgctcattgtcgtgccttgtgcaccggcgaccactctccgccctcatcagccttcggtgttaca 21886382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 34372146 - 34371978
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    ||||||||  ||||| |||||||||||| |||||||||||| |  | |||||  ||| ||||||||||| || |||||| ||||||| |||||||||||     
T  34372146 acaattcttttaagcattccttcaaccatgtagtcccatacttgtacggccttgggaaccctctcattctggtgtgattcggttcctctagaagctgtca 34372047  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34372046 ggagccgctcattgtcctgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 34371978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10927014 - 10927183
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||| |  |||||| ||||||| || |||||||||    
T  10927014 acaattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctcattctgatgtgattcggttcctctataagctgtcg 10927113  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagccttgggtgttaca 169  Q
    ||||   ||||||||||||||||||||||||  || |||||||| ||||||||||||  |||||||||||    
T  10927114 ggagctactcattgtcgtgccttgtgcaccgacgatcactcccctgccctcgtcagctgtgggtgttaca 10927183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 27646903 - 27647072
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||| ||||  ||||||||||||||||||  |||||| ||||||| ||||||||||||    
T  27646903 acaattcttataagccttccttcaaccatgtagccccatacctacacggccctaggatccctctcattccgatgtgattcggttcctctagaagctgtcg 27647002  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagccttgggtgttaca 169  Q
    |||| ||| ||||| |||||||||||||||||  |||||||||| ||||||||||||  |||| ||||||    
T  27647003 ggagccgcacattggcgtgccttgtgcaccggcaaccactcccctgccctcgtcagctgtgggcgttaca 27647072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 18304480 - 18304341
Alignment:
Q  30 gtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcac 129  Q
    ||||||||||||||||| | ||||||||||| ||||||||||  |||||||||||| | |||||||||||||||| |||||||||||||| |||||||||    
T  18304480 gtagtcccatacctacacgacctcaggatccttctcattccgttgtgatttggttcgtctagaagctgtcgggagccgctcattgtcgtgtcttgtgcac 18304381  T
Q  130 cggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||| || ||||||||| ||||||||| |||||||||||||    
T  18304380 cggcgatcactccccgtcctcgtcagtcttgggtgttaca 18304341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 10927471 - 10927628
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||||||||||  |||||| ||||||| || ||| ||| |    
T  10927471 acaattcttataagccttccttcaaccatgtagtctcatacctacacggcctcaagatccctctcattccgatgtgattcggttcctctataagttgttg 10927570  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagcc 157  Q
    ||||  |||||||||||||||||||||||||  || |||||||| |||||||||||||    
T  10927571 ggagctgctcattgtcgtgccttgtgcaccgacgatcactcccctgccctcgtcagcc 10927628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 1880144 - 1879990
Alignment:
Q  16 cttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgt 115  Q
    ||||||||||||| | |||| |||| || || || |||  |||||||||||||| || |||||||||||  | |||||| ||| ||||||| ||||||||    
T  1880144 cttccttcaaccatgcagtcacataactgcacggtctcgagatccctctcattctggtgtgatttggtttgtctagaagttgttgggagtcactcattgt 1880045  T
Q  116 cgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||||||| |||||||| |||| || |||| ||||||||||||| ||||||||||    
T  1880044 cgtgccttatgcaccggcgaccgcttcccgtcctcgtcagcctttggtgttacaa 1879990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 29680177 - 29680236
Alignment:
Q  10 ataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattc 69  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||| |||||||||    
T  29680177 ataagccttccttcaaccatgtagtcccatacctacacggcctcaagatctctctcattc 29680236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 189146 - 189076
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| | |||||||||| |  | ||||||||||||||||||||||||    
T  189146 acaattcttataagccttccttcaaccatgcagtcccatacatgtacggcctcaggatccctctcattccg 189076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 8642104 - 8642170
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattc 69  Q
    |||||| ||||||||||||||||||| | |||||||||||| || ||||| ||||||||||||||||    
T  8642104 aattcttataagccttccttcaaccatgcagtcccatacctgcacggccttaggatccctctcattc 8642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22556614 - 22556544
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||  ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||    
T  22556614 acaattcatataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccg 22556544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8391389 - 8391472
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggtt 84  Q
    |||||||| ||||| |||||||||| || |||||| ||| |||||| |||||||| |||||||||||||||  |||||| ||||    
T  8391389 acaattcttataagtcttccttcaatcatgtagtctcatgcctacacggcctcagaatccctctcattccgatgtgattcggtt 8391472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 170
Target Start/End: Original strand, 5067006 - 5067127
Alignment:
Q  48 ggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgcc 147  Q
    |||||| ||||| ||||||||| || |||||| | ||  | |||||| || || ||| |||||||||| ||| |||| ||||||| |||||||||||  |    
T  5067006 ggcctcgggatctctctcattctggtgtgattcgatttgtctagaagttg-cgagagccgctcattgttgtgtcttgcgcaccggcgaccactccccatc 5067104  T
Q  148 ctcgtcagccttgggtgttacaa 170  Q
    |||||||||| ||||||||||||    
T  5067105 ctcgtcagccatgggtgttacaa 5067127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22975078 - 22975148
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||| || ||||||||| | |||| ||||||| || ||||||||||||||||||||||||    
T  22975078 acaattcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggatccctctcattccg 22975148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 169
Target Start/End: Original strand, 11757389 - 11757470
Alignment:
Q  89 tagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagccttgggtgttaca 169  Q
    |||||||| ||||||||| ||||||||||||  ||||||||||| |||||| |||| || ||||| |||| |||||||||||    
T  11757389 tagaagctttcgggagtcactcattgtcgtgttttgtgcaccggcgaccacacccctgctctcgttagccatgggtgttaca 11757470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 22557047 - 22556977
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||  ||||||||||||||||||| | |||||||||||| || ||||||| || | |||||||||||    
T  22557047 acaattcatataagccttccttcaaccatgcagtcccatacctgcacggcctcatgaactctctcattccg 22556977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 3887134 - 3887195
Alignment:
Q  10 ataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    ||||| ||||||||||||| | ||||||||||||  | |||||||||||| |||||||||||    
T  3887134 ataagtcttccttcaaccatgcagtcccatacctgtacggcctcaggatcactctcattccg 3887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 8391477 - 8391524
Alignment:
Q  123 tgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||||||||| ||||||||||||||||| |||||  ||||||||||||    
T  8391477 tgtgcaccggcgaccactccccgccctcttcagctgtgggtgttacaa 8391524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16370776 - 16370843
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcatt 68  Q
    |||||||| |||||  |||||||||||| | ||||  ||||||||||||| |||||| ||||||||||    
T  16370776 acaattcttataagttttccttcaaccatgcagtcttatacctacatggcatcaggaaccctctcatt 16370843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1821984 - 1821914
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| || | ||| | |||| |||||||||||    
T  1821984 acaattcttataagccttccttcaaccatgcagtctcatacctgcacgaccttaagatctctctcattccg 1821914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2474037 - 2473967
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| | |||| ||| |||  | | ||| ||||||||||||||||||    
T  2474037 acaattcttataagccttccttcaaccatgcagtctcatgcctgtacgaccttaggatccctctcattccg 2473967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11160749 - 11160819
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||| | ||||||||||||||||| | |||||  |||||||||| | | ||| ||||||||||||||||    
T  11160749 acaattattataagccttccttcaactatgtagtgtcatacctacacgacttcatgatccctctcattccg 11160819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 4658148 - 4658217
Alignment:
Q  89 tagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
    |||| |||||| ||||||| |||||||| ||| || ||||| || |||||||||||| ||| ||||||||    
T  4658148 tagaggctgtcaggagtcggtcattgtcatgcattatgcactggcgaccactccccgtccttgtcagcct 4658217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 34405659 - 34405827
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  34405659 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggtgtgattcggttcctctagaagctgtcg 34405758  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34405759 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 34405827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 36422330 - 36422163
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| | ||||| ||||||||||||    
T  36422330 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggcgtgattcgattcctctagaagctgtcg 36422231  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttac 168  Q
    |||| ||||||||||||||||||||||||||| |||||||||||  ||||||| | ||||||||||||    
T  36422230 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccatcctcgtcggtcttgggtgttac 36422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2611720 - 2611888
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||||||| ||||  ||||| |||||||||||| |||||||| |||||||||||||  ||||||  |||||| ||||||||||||    
T  2611720 acaattcttataagccttccttccaccatatagtctcatacctacatgacctcaggacccctctcattccgatgtgattcagttcctctagaagctgtcg 2611819  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||    
T  2611820 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccaccctcgtcagcctttggtgttaca 2611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 2189222 - 2189054
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||| |||||||| | ||||||| |||| ||  ||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  2189222 acaattcttataagccttctttcaaccatgcagtcccacacctgcacagcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 2189123  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||    
T  2189122 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcatccttgagtgttaca 2189054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 3305380 - 3305549
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||| |||||||||||||| |||||| ||  |||||| ||||||| ||||||||||||    
T  3305380 acaattctcataagccttcattcaaccatgtagtcccatacttacacggcctcaggatccccctcatttcgatgtgattcggttcctctagaagctgtcg 3305479  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    ||||  ||||||||||||||||| | |||||| |||||||| |||||||||||||||||  |||||||||    
T  3305480 ggagctgctcattgtcgtgccttatccaccggcgaccactctccgccctcgtcagccttatgtgttacaa 3305549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 26957625 - 26957794
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||| |||||||| ||||| |||||||||||  |||||| ||||||||||||||||  |||||| ||||||| |||||| |||||    
T  26957625 acaattcttataagccttctttcaaccatgtagttccatacctacacagcctcaagatccctctcattccgatgtgattcggttcctctagaagttgtcg 26957724  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||||||||||||||||||||  ||||||| |||||||||||| ||||| ||||||||||    
T  26957725 ggagccgctcattgtcgtgccttgtgcaccgacgaccacttcccgccctcgtcggcctttggtgttacaa 26957794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 2463687 - 2463551
Alignment:
Q  34 tcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggt 133  Q
    |||||||||||||||||||||||| |||||||||||||| ||| || ||||||| ||||||||||  |||| || ||||||||||||||||||||||||     
T  2463687 tcccatacctacatggcctcaggaaccctctcattccggtgtgtttcggttcctctagaagctgttaggagccgttcattgtcgtgccttgtgcaccggc 2463588  T
Q  134 gaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||||||||||||||||||||||||||||||||||||    
T  2463587 gaccactccccgccctcgtcagccttgggtgttacaa 2463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 679895 - 679727
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||| ||| ||| ||||||||||||| | |||||||||||||||||||| |  ||||||  |||||| ||||||||||||    
T  679895 acaattcttataagccttccttcagccatgtactcccatacctacacgacctcaggatccctctcattctgatgtgattcagttcctctagaagctgtcg 679796  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||  |||||||||||||| ||||||| ||| |||||||||||| ||||||||||||| |||||||||    
T  679795 ggagcagctcattgtcgtgctttgtgcatcggcgaccactccccgtcctcgtcagccttaggtgttaca 679727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6747666 - 6747834
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||| |||||||||||||| |||||  |||||||||| |||||||||||||||||||||||   ||||||  | |  | |||||| |||||    
T  6747666 acaattcttataatccttccttcaaccatgtagtatcatacctacacggcctcaggatccctctcattccaatgtgattcagcttgtctagaagttgtcg 6747765  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  6747766 ggagccgctcattgtcatgccttgtgcaccggcgaccactccctgccctcgtcagccttgggtgttaca 6747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 37 - 169
Target Start/End: Complemental strand, 10430805 - 10430673
Alignment:
Q  37 catacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgac 136  Q
    ||||||| || |||||||||| |||||||||||||| |||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||||||| |||    
T  10430805 catacctgcacggcctcaggaaccctctcattccggtgtgatacggttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgac 10430706  T
Q  137 cactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||||||||||| ||||||||||||||||||    
T  10430705 cactccccgccctcatcagccttgggtgttaca 10430673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 43233491 - 43233323
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||| |||||   |||| |||||||||| ||||||| ||||||||||||| ||| |||||| ||||||| ||||||||||      
T  43233491 acaattcttataagtcttcctttaaccatacagtcacatacctacacggcctcatgatccctctcatttcggtgtgattcggttcctctagaagctgtta 43233392  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| |||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  43233391 ggagccgctcattgtcgtgccttatgcaccggcgaccactcctcgcactcgtcagccttgggtgttaca 43233323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 28495928 - 28495791
Alignment:
Q  5 ttctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggag 104  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||  |||||| | ||||| |||||| ||| |||||    
T  28495928 ttcttataagccttccttcaaccatgtagtcccatacctacacggcctcaagatccctctcattccgatgtgattcgattcctctagaagttgttgggag 28495829  T
Q  105 tcgctcattgtcgtgccttgtgcaccggtgaccactcc 142  Q
     |||| ||||| |||||||||||||||| |||||||||    
T  28495828 ccgctaattgttgtgccttgtgcaccggcgaccactcc 28495791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 35474189 - 35474357
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||| ||||||||| |||||| |||||||||| | ||| ||||||||||||||||||| |||||| |  |  | |||||| |||||    
T  35474189 acaattcttataagtctttcttcaaccatgtagtctcatacctacacgacctaaggatccctctcattccggtgtgattcgactgttctagaagttgtcg 35474288  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||  ||||||||||||||||||||||||||  ||||||||||||| ||| |||||||| |||||||||    
T  35474289 ggaaccgctcattgtcgtgccttgtgcaccgacgaccactccccgcactcatcagccttaggtgttaca 35474357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 42515618 - 42515455
Alignment:
Q  5 ttctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggag 104  Q
    |||| ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||| |  |||||| ||||| | ||||||||||||||||    
T  42515618 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcattctgatgtgattcggttcgtctagaagctgtcgggag 42515519  T
Q  105 tcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
      ||||||||||  |||   |||||||| || ||||||| ||||||||||||||||||| |||||    
T  42515518 ctgctcattgtcacgccccttgcaccggcga-cactccctgccctcgtcagccttgggtattaca 42515455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 2193334 - 2193209
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || || ||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  2193334 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggtctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 2193235  T
Q  101 ggagtcgctcattgtcgtgccttgtg 126  Q
    |||| || ||||||||||||||||||    
T  2193234 ggagccgttcattgtcgtgccttgtg 2193209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 35527189 - 35527348
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||| |||||||||  |||||||||  | || | |||| |||||||||||||| ||| |||||| ||||| | |||||||||| |    
T  35527189 acaattcttataagccttctttcaaccaaccagtcccatatttgcacgacctcgggatccctctcatttcggtgtgattcggttcgtctagaagctgttg 35527288  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgg 161  Q
    |||| ||||||||| |||| |||||||||||  |||||||||||| |||||||||||||||    
T  35527289 ggagccgctcattg-cgtgtcttgtgcaccgacgaccactccccgtcctcgtcagccttgg 35527348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29357524 - 29357692
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||| | |||||||||||| | |||||||||||| || | |||| |||| |||||||||| || ||||||  |||| | |||||| |||||    
T  29357524 acaattcttataaacattccttcaaccatgcagtcccatacctgcacgacctcgggatacctctcattc-ggtgtgattcagttcatctagaagttgtcg 29357622  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| |||||||||||||||||| |||| ||| ||||| |   |||||||||||||||||||||||||||    
T  29357623 ggagccgctcattgtcgtgccttatgcatcggcgaccattttacgccctcgtcagccttgggtgttacaa 29357692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28495676 - 28495788
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||  | |||| | ||||| |||||||||| |    
T  28495676 acaattcttataagtcttccttcaaccatgtagtcccatacctacacgacctcaggatccctctcattccgatgggattcgattcctctagaagctgttg 28495775  T
Q  101 ggagtcgctcatt 113  Q
    |||| ||||||||    
T  28495776 ggagccgctcatt 28495788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 16811914 - 16812074
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| |||||| |||||||||| ||| ||        |||||||| |  |||||| |||| || ||||||| ||||    
T  16811914 acaattcttataagcattccttcaaccatgtagtctcatacctacacggcatc--------tctcattctgatgtgattcggtttctttagaagccgtcg 16812005  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||| |||| ||||||||||||  ||||||||||||||| ||||||||||| |||||||    
T  16812006 ggagccgctcattggcgtgtcttgtgcaccggcaaccactccccgccctagtcagccttggatgttaca 16812074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 6719142 - 6719275
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||  ||||||||||||||||||||||   |||||| ||||||           |||    
T  6719142 acaattcttataagcattccttcaaccatgtagtcccatacctacacagcctcaggatccctctcattccaatgtgattcggttcc-----------tcg 6719230  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccg 145  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||    
T  6719231 ggagccgctcattggcgtgccttgtgcaccggcgaccactccccg 6719275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 46425819 - 46425705
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||  |||||||| |||||||||||||||||||| |||||||||||||||||||||  |||||| || |  | ||||||||||||    
T  46425819 acaattcttataagccttatttcaaccatgtagtcccatacctacatggtctcaggatccctctcattccgatgtgattcggcttgtctagaagctgtcg 46425720  T
Q  101 ggagtcgctcattgt 115  Q
    |||| ||||| ||||    
T  46425719 ggagccgctctttgt 46425705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 22529307 - 22529428
Alignment:
Q  5 ttctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggag 104  Q
    |||| ||||||||||||||||||| |||| ||||||| |||||| |||||||||||||||||||| |   ||||| ||||| | ||||||| | ||||||    
T  22529307 ttcttataagccttccttcaaccatgtaggcccatacttacatgacctcaggatccctctcattcggatatgattcggttcgtctagaagcaggcgggag 22529406  T
Q  105 tcgctcattgtcgtgccttgtg 126  Q
     |||||||||||  ||||||||    
T  22529407 ccgctcattgtcacgccttgtg 22529428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29039088 - 29039248
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    ||||||||  ||||||| | |||||||| |||||| |||| ||||| ||||||||||| ||||||||||||  |||||| |||| ||||         ||    
T  29039088 acaattcttgtaagcctccattcaaccatgtagtcacatatctacacggcctcaggatgcctctcattccgatgtgattcggtttctgt---------cg 29039178  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| || |||||||| |||| | |||||| |||||||||||    
T  29039179 ggagccgctcattgtcgtgccttgtgcaccggcgatcactcccctgcccccatcagccgtgggtgttaca 29039248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 28754712 - 28754637
Alignment:
Q  185 cctcaaaaagataggctcatgcttgtctctgattaattggtttgttcaattcagaattgttaagtagatgtgtcaga 261  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||| ||||||| |||||||    
T  28754712 cctcaaaaagataggctcatgcttgtctctgattaattggttcgttcaattcataa-tgttcagtagatatgtcaga 28754637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 22377489 - 22377587
Alignment:
Q  179 accattcctcaaaaagataggctcatgcttgtctctgattaattggtttgttcaattcagaattgttaagtagatgtgtcagattagacgttttcttctc 278  Q
    ||||| ||||||||||||||||| ||| |||||||||| ||||||||| ||||||||||  |||||| ||||||||||||| || ||||| |||| ||||    
T  22377489 accatccctcaaaaagataggctaatgtttgtctctgaataattggttagttcaattca-tattgttgagtagatgtgtcaaataagacggtttcctctc 22377587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13125204 - 13125274
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || ||||||| ||||||||||||||||    
T  13125204 acaattcttataagccttccttcaaccatgcagtcccatacctgcagggcctcaagatccctctcattccg 13125274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 15132681 - 15132615
Alignment:
Q  171 attcaaacaccattcctcaaaaagataggctcatgcttgtctctgattaattggtttgttcaattca 237  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  15132681 attcagacaccatccctcaaaaagataggctcatgcttctctctgattaattgattcgttcaattca 15132615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13124769 - 13124838
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattcc 70  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || ||||||| |||||||||||||||    
T  13124769 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagatccctctcattcc 13124838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 2189557 - 2189510
Alignment:
Q  122 ttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2189557 ttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 2189510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2466002 - 2465949
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctca 54  Q
    |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  2466002 acaactcttataagccttccttcaaccatgtagtcccatacctacatggcctca 2465949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2941825 - 2941893
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattc 69  Q
    |||||||| || |||||||||||||||| | ||||||||||||  | ||||||||||||||||||||||    
T  2941825 acaattcttatcagccttccttcaaccatgcagtcccatacctgtacggcctcaggatccctctcattc 2941893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 36015479 - 36015646
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    ||||||||  ||||| |||||||||||| | |||| ||||| | ||  ||||  |||||||||||||||||| |||||||||||| | || || || |||    
T  36015479 acaattcttttaagctttccttcaaccatggagtctcatacttgcactgccttgggatccctctcattccggtgtgatttggttcgtctataaactttcg 36015578  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttac 168  Q
     ||| |||||||| || ||| ||||||||||  | ||||||   ||| |||| | |||||||||||||    
T  36015579 agagccgctcattatcatgcattgtgcaccgacggccactcattgccttcgttaaccttgggtgttac 36015646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11517457 - 11517526
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||| ||| | ||||||||||||  | ||||||||||||||||||||||||    
T  11517457 acaattcttataagccttccttca-ccatgcagtcccatacctgtacggcctcaggatccctctcattccg 11517526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 16812215 - 16812141
Alignment:
Q  98 tcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaaat 172  Q
    ||||||| | ||||||| || ||||||||||||||  ||||||||||||||| |||| |||||| ||||||||||    
T  16812215 tcgggagccactcattggcgcgccttgtgcaccggcaaccactccccgccctagtcaaccttggatgttacaaat 16812141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 29758364 - 29758418
Alignment:
Q  171 attcaaacaccattcctcaaaaagataggctcatgcttgtctctgattaattggt 225  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  29758364 attcagacaccatatctcaaaaagataggctcgtgcttgtctctgattaattggt 29758418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42515170 - 42515100
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||| |||||||||| || | |||| ||||||| || ||||||||||||||||||||||||    
T  42515170 acaattcttataagtcttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcattccg 42515100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 7360486 - 7360414
Alignment:
Q  206 cttgtctctgattaattggtttgttcaattcagaattgttaagtagatgtgtcagattagacgttttcttctc 278  Q
    ||||||| |||||||||||||  ||||||||| ||||||  | ||||||||| |||||||||| |||| ||||    
T  7360486 cttgtctgtgattaattggttcattcaattcataattgtcgattagatgtgttagattagacgctttcctctc 7360414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 158
Target Start/End: Original strand, 31744013 - 31744050
Alignment:
Q  121 cttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  31744013 cttgtgcactggtgaccactccccgccctcatcagcct 31744050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 50347824 - 50347658
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  50347824 acaattcttataagccttccttcaaccaagtagtctcatacatacaaggcctcaggatccctctcattccggcgtgattcggttcctctagaagctgtcg 50347725  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtta 167  Q
    |||| ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||    
T  50347724 ggagccgctcattgtcgttccttgtgcaccggcgatcactccccgccctcgtcagccttgggtgtta 50347658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 11180102 - 11180269
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  11180102 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcaggatccctctcattccggc-tgattcggttcctctagaagctgtcg 11180200  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11180201 ggagccgctcattgtcgtaccttgtgcaccggcgaccactccccgccctcttcagccttgggtgttaca 11180269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 13150167 - 13150334
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  13150167 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcaggagccctctcattccggcgtgattcggttcctctagaagctgtcg 13150266  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
     ||| ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  13150267 agagccgctcattgtcgtgccttgtgcaccggcga-cactccccgccctcatcagccttgggtgttaca 13150334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 16811459 - 16811291
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||  |||||| | ||||| ||||||||||||    
T  16811459 acaattcttataagccttccttcaaccatggagtcccaaacctacacggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcg 16811360  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  16811359 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccaccctcgtcagccttgggtgttaca 16811291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 39653242 - 39653073
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| | |||||||||||| || |||||||||| |||||||||||||| ||||||  |||||| |||||||||||     
T  39653242 acaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcagttcctctagaagctgtca 39653143  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  39653142 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagccttgggtgttacaa 39653073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 32227289 - 32227444
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||| ||| |    
T  32227289 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggccttaggatccctctcattccggcgtgattcggttcctctagaagttgttg 32227388  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagc 156  Q
    |||| |||||||||| ||||||||||||| || |||||||||||||||||||||||    
T  32227389 ggagccgctcattgttgtgccttgtgcactggcgaccactccccgccctcgtcagc 32227444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 28561824 - 28561656
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| ||||||  |||||| |||||| ||||     
T  28561824 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcagttcctctagaagttgtca 28561725  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    | || ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  28561724 gtagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagtcttgggtgttaca 28561656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 16811003 - 16810840
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||| ||||||| | ||||||||| ||||| ||||||| ||||||||||||||||  |||||| | ||||| ||||||||||||    
T  16811003 acaattcttataagccttccatcaaccatgcagtcccatatctacacggcctcaagatccctctcattccgatgtgattcgattcctctagaagctgtcg 16810904  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtg 164  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  16810903 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttcggtg 16810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 37045113 - 37044944
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| ||||||||  || ||||||||| ||||||| |||||||||||||||||||||| |  |||||| ||||||| ||||||||||||    
T  37045113 acaattcttataagcattccttcattcatgtagtcccacacctacacggcctcaggatccctctcattcagatgtgattcggttcctctagaagctgtcg 37045014  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  37045013 ggagccgctcattggcgtgccttgtgcaccggtgaccactcccctgccctcgtcagctgtgggtgttaca 37044944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 32227578 - 32227453
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  32227578 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcag-atccctctcattccggcgtgattcggttcctctagaagctgtcg 32227480  T
Q  101 ggagtcgctcattgtcgtgccttgtgc 127  Q
    |||| ||||||||||||||||||||||    
T  32227479 ggagccgctcattgtcgtgccttgtgc 32227453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 14814027 - 14813858
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||| | ||||||||||||| ||||| | |||| |||||||||| |||||||||| |||||||||||||| |||||| ||||||| |||||||| ||     
T  14814027 acaattattataagccttcctttaaccatgcagtctcatacctacacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctctca 14813928  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    | || |||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  14813927 gaagccgctaattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagccttgtgtgttacaa 14813858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 25230773 - 25230915
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||   |||||||||||||| || |||||||||    
T  25230773 acaattcttataaaccttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgatttggttcctctataagctgtcg 25230872  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccc 143  Q
    ||||  |||||||||||||||||||||||||| || |||||||    
T  25230873 ggagctgctcattgtcgtgccttgtgcaccggagatcactccc 25230915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 25238360 - 25238502
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||   |||||||||||||| || |||||||||    
T  25238360 acaattcttataaaccttccttcaaccatgtagtctcatacctacatggcctcaggatccctctcattccaatgtgatttggttcctctataagctgtcg 25238459  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccc 143  Q
    ||||  |||||||||||||||||||||||||| || |||||||    
T  25238460 ggagctgctcattgtcgtgccttgtgcaccggagatcactccc 25238502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 25230318 - 25230447
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggg 102  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||| |||||  |||||||||||||| || ||| |||||||    
T  25230318 aattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctccttccgatgtgatttggttcctctataagatgtcggg 25230417  T
Q  103 agtcgctcattgtcgtgccttgtgcaccgg 132  Q
    || |||||||||||||||||||||||||||    
T  25230418 agccgctcattgtcgtgccttgtgcaccgg 25230447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 25237905 - 25238034
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggg 102  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||| |||||  |||||||||||||| || ||| |||||||    
T  25237905 aattcttataagccttccttcaaccatgtagtcccatacctacacgacctcaggatccctctccttccgatgtgatttggttcctctataagatgtcggg 25238004  T
Q  103 agtcgctcattgtcgtgccttgtgcaccgg 132  Q
    || |||||||||||||||||||||||||||    
T  25238005 agccgctcattgtcgtgccttgtgcaccgg 25238034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 13155302 - 13155439
Alignment:
Q  31 tagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcacc 130  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||| |||||||||||| ||  |||||||||||||||||||||||||    
T  13155302 tagtcccatacctacaaggcctcaggatcc-tctcatttcggcgtgattcggttcctctagaagctgtcgagac-cgctcattgtcgtgccttgtgcacc 13155399  T
Q  131 ggtgaccactccccgccctcgtcagccttgggtgttacaaa 171  Q
    || ||| ||||||||||||||||||| ||||||||||||||    
T  13155400 ggcgac-actccccgccctcgtcagcattgggtgttacaaa 13155439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 158
Target Start/End: Complemental strand, 30529763 - 30529608
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggg 102  Q
    |||||| ||||||||| ||||||||| |||||| ||||||||||  |||||||||||||||||||||||  ||||||  |||||| |||||| |||||||    
T  30529763 aattcttataagccttacttcaaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgattcagttcctctagaagttgtcggg 30529664  T
Q  103 agtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
    ||  ||| ||||||||||||||||||| |  ||||||||  |||||||||||||||    
T  30529663 agctgcttattgtcgtgccttgtgcactgacgaccactcatcgccctcgtcagcct 30529608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 20885185 - 20885327
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| |||||| |||||||||| | ||||| ||||||||||||| ||  |||||| ||||||| |||||| |||||    
T  20885185 acaattcttataagtcttccttcaaccatgtagtcacatacctacacgacctcaagatccctctcattgcgatgtgatt-ggttcctctagaagttgtcg 20885283  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc 144  Q
    |||| ||||||||| ||||||||||||||||| || ||||||||    
T  20885284 ggagccgctcattggcgtgccttgtgcaccggcgatcactcccc 20885327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 32797003 - 32797171
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||| ||||||||| |||||  ||||||||||||| |||||||||||||| ||| ||  |||||| || |  | ||||||||||||    
T  32797003 acaattcttataagtcttgcttcaaccatgtagtttcatacctacatggtctcaggatccctcttatttcgatgtgattcggcttgtctagaagctgtcg 32797102  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| || |||||||| | | ||||||||||| ||||||||| ||||||||| |||||||||||||||||    
T  32797103 ggagccgttcattgtcatac-ttgtgcaccggcgaccactccacgccctcgttagccttgggtgttacaa 32797171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 39653617 - 39653530
Alignment:
Q  82 gttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  39653617 gttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccaccctcgtcagccttgggtgttaca 39653530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 2911153 - 2911005
Alignment:
Q  21 ttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgc 120  Q
    |||||||| || ||||||||||| || |||||| ||||||||||||||| || |||||| ||||| | ||||||||||  |||  |||| ||| |||||     
T  2911153 ttcaaccatgtggtcccatacctgcacggcctcgggatccctctcattcaggtgtgattcggttcgtctagaagctgttaggatccgcttattatcgtgt 2911054  T
Q  121 cttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||||||||| |||||||||||| ||||||||  |||||||||||||    
T  2911053 cttgtgcaccggcgaccactccccgtcctcgtcaatcttgggtgttaca 2911005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 25803072 - 25803240
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| | ||| ||| ||||||||| | ||||||||||||||| | | | |||| |||||| ||||||   ||||| ||||| | |||||||||| |    
T  25803072 acaattcttacaagtcttacttcaaccatgcagtcccatacctacacgacattaggaaccctcttattccgatatgattcggttcatctagaagctgttg 25803171  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    | || ||||||||||  ||||||||||||| | |||||||||||| ||| |||||||||||||||||||    
T  25803172 gaagccgctcattgttatgccttgtgcaccagcgaccactccccgtcctagtcagccttgggtgttaca 25803240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 14820232 - 14820107
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||| | ||  | || |||||||||||| || ||||||| |||||||||| ||| |||||| ||||||| |||||||||||     
T  14820232 acaattcttataagccttcctttagccgtgcagccccatacctacacgggctcaggaaccctctcattgcggtgtgattcggttcctctagaagctgtca 14820133  T
Q  101 ggagtcgctcattgtcgtgccttgtg 126  Q
    |||| |||||||| ||||||||||||    
T  14820132 ggagccgctcattatcgtgccttgtg 14820107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 39641015 - 39640875
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||| ||| ||||| ||||||||||||| |||||| |||||||||| |||||||||||| ||||||||| |  |||||| | ||| | || |||||||||    
T  39641015 acaactcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatctctctcattctgatgtgattcgattcttctaaaagctgtcg 39640916  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactc 141  Q
    |||| || |||||||| || |||||||||||  ||||||||    
T  39640915 ggagccgttcattgtcatgtcttgtgcaccgacgaccactc 39640875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 25239147 - 25239253
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggg 102  Q
    |||||| |||||| ||||||||||||  |||||||||||||||| | |||||| ||||||||||| |||| |||||| | ||||| ||||||||||||||    
T  25239147 aattcttataagcgttccttcaaccatatagtcccatacctacacgacctcagaatccctctcataccggtgtgattcgattcctctagaagctgtcggg 25239246  T
Q  103 agtcgct 109  Q
    || ||||    
T  25239247 agccgct 25239253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 14814364 - 14814318
Alignment:
Q  120 ccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14814364 ccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtt 14814318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 25238849 - 25238907
Alignment:
Q  111 attgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25238849 attgtcctgctttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 25238907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 970956 - 970874
Alignment:
Q  89 tagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaaa 171  Q
    |||||| |||| |||| ||||||||||||| |||||||| | ||  ||||||||||||||||| | |||||||||||||||||    
T  970956 tagaagttgtcaggagccgctcattgtcgtaccttgtgccctggcaaccactccccgccctcgccggccttgggtgttacaaa 970874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31284344 - 31284414
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || | ||||| ||||||||||||||||    
T  31284344 acaattcttataagccttccttcaaccatgcagtcccatacctgcacgacctcaagatccctctcattccg 31284414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 29224402 - 29224245
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtg-atttggttcctgtagaagctgtc 99  Q
    |||||||| ||||| ||||||||||||| | |||| |||| ||||||||||||| || |||| |||||| |  ||| ||| |||| ||| | |||||| |    
T  29224402 acaattcttataagtcttccttcaaccatgcagtctcatatctacatggcctcatgaaccctttcattctgatgtgaattcggttgctg-aaaagctgcc 29224304  T
Q  100 gggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
     |||| ||||||||||| |||||| || || ||  ||||||||||| |||| |||||||    
T  29224303 aggagccgctcattgtcatgccttctgaactggcaaccactccccgtcctcatcagcct 29224245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8067358 - 8067288
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||||  |||||||||| | | |||||||||| || ||||||||| ||||||||||||||    
T  8067358 acaattcttataagccggccttcaaccatgcaatcccatacctgcacggcctcagggtccctctcattccg 8067288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27187398 - 27187467
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattcc 70  Q
    |||||||| |||||||||| || ||||| | |||||||||| | ||  ||||||||||||||||||||||    
T  27187398 acaattcttataagccttcatttaaccatgcagtcccatacatgcacagcctcaggatccctctcattcc 27187467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 7477267 - 7477199
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||| ||||||||||||||||||| | |||| ||||||| || | | | ||||||||||||||||||    
T  7477267 aattcttataagccttccttcaaccatgcagtctcatacctgcacgactttaggatccctctcattccg 7477199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 38191206 - 38191254
Alignment:
Q  171 attcaaacaccattcctcaaaaagataggctcatgcttgtctctgatta 219  Q
    ||||||||||||| | ||||||||||  |||||||||||||||||||||    
T  38191206 attcaaacaccatccttcaaaaagatgagctcatgcttgtctctgatta 38191254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 25802619 - 25802792
Alignment:
Q  4 attctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggga 103  Q
    ||||| || |||||||| | ||||| | |||| ||||||||||||||| || |||||||||||||||   | || | || |||| ||||||||||  |||    
T  25802619 attcttatcagccttccgttaaccatgcagtctcatacctacatggccacatgatccctctcattccaatgagactcggctcctctagaagctgttagga 25802718  T
Q  104 gtcgctcattgtcgtgccttgtgcaccgg-----tgaccac---tccccgccctcgtcagccttgggtgttaca 169  Q
    | | |||||| || ||||||||||   ||     |||| ||   ||||||||||||||||||||||||||||||    
T  25802719 gccactcattctcatgccttgtgccttgggtgtttgacaaccattccccgccctcgtcagccttgggtgttaca 25802792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25248189 - 25248119
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||| | |||||| ||||| | |||||||||||| || ||||| || |||||||||||||||    
T  25248189 acaattcttataaacattcctttaaccatgcagtcccatacctgcacggccttagaatccctctcattccg 25248119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41472378 - 41472309
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||| |||||||||||| | |||| |||||||  | | ||||||||||||||||||||||    
T  41472378 acaattcttataagc-ttccttcaaccatgcagtctcatacctgtacgacctcaggatccctctcattccg 41472309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 7493957 - 7493889
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||| ||||||||||||||||||| | |||| ||||||| || | | | |||||| |||||||||||    
T  7493957 aattcttataagccttccttcaaccatgcagtctcatacctgcacgactttaggatctctctcattccg 7493889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 5e-65; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 12827322 - 12827491
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||| |||     
T  12827322 acaattcttataagccttccttcaaccaagtagtcccatacctacaaggcctcaggatccctctcattccggcgtgattcggttcttctagaagcagtca 12827421  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  12827422 ggagccgctcattgtcgtgccttgtgcaccggcgatcactccccaccctcgtcagccttgggtgttacaa 12827491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 27022406 - 27022575
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||| || |||| ||||||||||||    
T  27022406 acaattcttataagccttctttcaaccatgtagtcccatacctacatggcctcaagatccctctcattccgatgtgattcggctcctctagaagctgtcg 27022505  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  27022506 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagccttgggtattacaa 27022575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10844961 - 10844793
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  10844961 acaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 10844862  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10844861 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 10844793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 27925977 - 27925809
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||| |||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  27925977 acaattcttataatccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 27925878  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  27925877 ggagccgctcattgtcgtgccttgtgcaccagcgaccactccccgtcctcgtcagccttgggtgttaca 27925809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 22026457 - 22026289
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||| |||||||| | |||||||||||| || ||||||| || |||||||||||||| |||||| ||||||| |||||||||||     
T  22026457 acaattcttataagccttcattcaaccatgcagtcccatacctgcacggcctcacgaaccctctcattccggtgtgattcggttcctctagaagctgtca 22026358  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  22026357 ggagccgctcattgtcatgccttgtgcaccggcgaccactcctcgccctcgtcagccttgggtgttaca 22026289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 22549063 - 22549231
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| | |||| ||||||| ||  |||||||||  ||||||||||||| |||||| ||||||| |||||||||||     
T  22549063 acaattcttataagtcttccttcaaccatgcagtcacatacctgcacagcctcaggaagcctctcattccggtgtgattcggttcctctagaagctgtca 22549162  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22549163 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 22549231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 32292475 - 32292307
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| | |||||||||| | || |||||||||| |||||||||||||| |||||| ||||||| ||||| || |||    
T  32292475 acaattcttataagcattccttcaaccatgcagtcccatacttgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaaactatcg 32292376  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  32292375 ggagccgctcattgtcgtgccttgtgcaccggcgatcactccccgccctcgtcagccttgggtgttaca 32292307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 8080410 - 8080579
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| || ||| |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||  ||||||  |||||| ||||||||||      
T  8080410 acaattcttatcagctttccttcaaccatgtagtcccatacctacacggcttcaggatccctctcattccgatgtgattcagttcctctagaagctgtta 8080509  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
     ||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  8080510 agagccgctcattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagccttgggtgttacaa 8080579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41659173 - 41659342
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| | |||||||||||| || | | |||||| |||||||||||||| |||||| ||||||| ||||||||||||    
T  41659173 acaattcttataagtcttccttcaaccatgcagtcccatacctgcacgacatcaggaaccctctcattccggtgtgattcggttcctctagaagctgtcg 41659272  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaaa 171  Q
    |||| | |||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  41659273 ggagccactcattgtcgtg-cttgtgcaccggcgaccactccccgccctcgtcagccttaggtgttacaaa 41659342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 22548617 - 22548785
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||  ||||||||||||| | |||| ||||||| ||  ||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  22548617 acaattcttataaaacttccttcaaccatgcagtcacatacctgcacagcctcaggaaccctctcattccggtgtgattaggttcctctagaagctgtca 22548716  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| |||||||||| ||||||||||||| || ||||||||||| ||||| ||||||||||||||||||    
T  22548717 ggagccgctcattgtagtgccttgtgcactggcgaccactccccaccctcatcagccttgggtgttaca 22548785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6464978 - 6465146
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||| ||| |||||||||||   |||||| | || || |||||| ||| |    
T  6464978 acaattcttataagccttccttcaaccatgtagttccatacctacacggcctcatgattcctctcattccaatgtgattcgattactctagaagttgttg 6465077  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| |||||||| |||||||||||||||||| ||||||||| |||||||||||| | |||||||||||    
T  6465078 ggagccgctcattatcgtgccttgtgcaccggcgaccactcctcgccctcgtcagacgtgggtgttaca 6465146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 27021947 - 27022111
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattc----cggcgtgatttggttcctgtagaagct 96  Q
    |||||||| ||||||||||||||||||| | ||||  ||||||||||||||||||||||||||||||||    ||  |||||| || |||| |||||| |    
T  27021947 acaattcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggatccctctcattcattccgatgtgattcggctcctctagaagtt 27022046  T
Q  97 gtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgg 161  Q
    |||||||| | ||||||||||||||||||||||| | ||||||||||| ||||||||||||||||    
T  27022047 gtcgggagccactcattgtcgtgccttgtgcacccgcgaccactccccaccctcgtcagccttgg 27022111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 22840597 - 22840765
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| |||| ||| |||| |||||| ||||||||||  ||||||||||| |||||||||||  ||||||  ||| || |||||| | |||    
T  22840597 acaattcttataagtcttcattcgaccatgtagtctcatacctacaaagcctcaggatctctctcattccgatgtgattcagttactctagaagttatcg 22840696  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| |||||||| ||||| ||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  22840697 ggagccgctcattatcgtgtcttatgcaccggcgaccactccccgcccttgtcagccttgggtgttaca 22840765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 28375122 - 28375290
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||||||||| || | |||| ||||||| || |||||||||||||||||||||  || |||||| | ||| | ||||||||||||    
T  28375122 acaattcttataagccttccttcaatcatgcagtctcatacctgcacggcctcaggatccctctcattatggtgtgattcgtttcgtctagaagctgtcg 28375221  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| |||| |||||||||||||||||||||  |||||||| | |||||||| ||| |||| |||||||    
T  28375222 ggagccgctaattgtcgtgccttgtgcaccgacgaccactctctgccctcgttagctttggttgttaca 28375290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 28453416 - 28453249
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||  ||| |||||||| | |||| ||||||| || | |||| |||||||||||||||||| ||||||  || | | || ||| |||||    
T  28453416 acaattcttataagttttctttcaaccatgaagtctcatacctgcacgacctcgggatccctctcattccggtgtgattcagt-catctaaaagttgtcg 28453318  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  28453317 ggagccgctcattgtcgtgccttgtgcaccggcaaccactccccgccctcgtcagccttgggtgttaca 28453249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33852326 - 33852493
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||  ||||||||||||   |||| ||||||| || || ||| ||||||||||||||| || ||||||  |||||| | |||| | |||    
T  33852326 acaattcttataagttttccttcaaccatacagtctcatacctgcacggtctcgggatccctctcattctggtgtgattcagttcctcttgaagttatcg 33852425  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  33852426 ggagccgctcattgtcgtgccttgtgcaccggcgaccact-cacgccctcgtcagccttgggtgttaca 33852493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 2044136 - 2043965
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||  ||||||  |||||| |||||| |||||    
T  2044136 acaattcttataagccttccttcaaccatgtagtctcatacctacacagcctcaggatccctctcattccgatgtgattctgttcctctagaagttgtcg 2044037  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccc---tcgtcagccttgggtgttaca 169  Q
    | || || | ||| |||||  ||||||||||| ||||| | |||| ||   |||||||||||||||||||||    
T  2044036 gaagccgttaattatcgtgttttgtgcaccggcgaccatttcccgtcctcgtcgtcagccttgggtgttaca 2043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 8119218 - 8119112
Alignment:
Q  171 attcaaacaccattcctcaaaaagataggctcatgcttgtctctgattaattggtttgttcaattcagaattgttaagtagatgtgtcagattagacgtt 270  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||   ||||| |||||||||||||||| |||||||    
T  8119218 attcagacaccattcctaaaaaagataggcttatgcttgtctctgattaatttgttcgttcaattca-ttttgttgagtagatgtgtcagataagacgtt 8119120  T
Q  271 ttcttctc 278  Q
    ||| ||||    
T  8119119 ttcctctc 8119112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29971469 - 29971629
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||  ||||||||||||| |||||| |||||||||| ||||||||||||| ||  |||| |  ||||||  |||| | || || ||||||    
T  29971469 acaattcttataaatcttccttcaaccatgtagtctcatacctacacggcctcaggatccttccaattctgatgtgattcagttcgtctaaaaactgtcg 29971568  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgg 161  Q
    |||  | ||||||| | |||||| |||||||||||||| ||||||| || || ||||||||    
T  29971569 ggaaccactcattgccatgccttatgcaccggtgaccattccccgcacttgtgagccttgg 29971629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10844683 - 10844754
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccgg 72  Q
    |||| ||| ||||||||||||||||||| | |||||||||||| || |||||||||| ||||||||||||||    
T  10844683 acaactcttataagccttccttcaaccatgcagtcccatacctgcaaggcctcaggaaccctctcattccgg 10844754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 25307738 - 25307676
Alignment:
Q  106 cgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttac 168  Q
    |||||||||||||| ||||| |||||   ||||||||| ||||||||||||||||||||||||    
T  25307738 cgctcattgtcgtgtcttgtacaccgactaccactcccggccctcgtcagccttgggtgttac 25307676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22705250 - 22705181
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattcc 70  Q
    |||||||| |||| ||||||||||| ||   ||||||||||||||| ||| |||||||||||||||||||    
T  22705250 acaattcttataacccttccttcaatcatccagtcccatacctacacggcttcaggatccctctcattcc 22705181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25148045 - 25147977
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattc 69  Q
    |||||||| ||||||||||||||||| |   ||||||||||||||| | |||| |||||||||||||||    
T  25148045 acaattcttataagccttccttcaacgacacagtcccatacctacacgacctcgggatccctctcattc 25147977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 25147614 - 25147535
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgattt 80  Q
    |||||||| ||||||||||||||||||| | |||| ||||||||||  | || |||||| |||||||||||  |||||||    
T  25147614 acaattcttataagccttccttcaaccatgcagtctcatacctacacagtcttaggatctctctcattccgatgtgattt 25147535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17103159 - 17103089
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||| ||||||||||||| | |||| |||||||  | |||||||||||| |||||||||||    
T  17103159 acaattcttataagtcttccttcaaccatgcagtctcatacctgtacggcctcaggatctctctcattccg 17103089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 1297085 - 1296929
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||  || ||||||||| | |||| ||||||| ||||  ||||| | |||||||| |  |  ||||||||||| || ||||||||||      
T  1297085 acaattcttataagttttacttcaaccatgcagtctcatacctgcatgatctcagaacccctctcactttgatgtgatttggttgct-tagaagctgtta 1296987  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
     ||| ||| ||||||| || ||||||||||||| | ||||||| |||||||| |||||    
T  1296986 tgagccgcgcattgtcatgtcttgtgcaccggtcatcactccctgccctcgtaagcct 1296929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 15037032 - 15037075
Alignment:
Q  235 tcagaattgttaagtagatgtgtcagattagacgttttcttctc 278  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||    
T  15037032 tcagaattgttgagtagatgtgtcagattagacattttcctctc 15037075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 34309011 - 34309077
Alignment:
Q  5 ttctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||| |||||||||||||||||||   |||| ||||| |  | ||||||||||||||||||||||||    
T  34309011 ttcttataagccttccttcaaccatacagtctcatacttgtacggcctcaggatccctctcattccg 34309077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3744716 - 3744671
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctaca 46  Q
    |||||||| ||||| ||||||||||||| | |||||||||||||||    
T  3744716 acaattcttataagtcttccttcaaccatgcagtcccatacctaca 3744671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27819314 - 27819382
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattc 69  Q
    |||||||| || |||||||||||||||| | |||| ||||| | |||| | ||| ||||||||||||||    
T  27819314 acaattcttattagccttccttcaaccatgaagtctcatacttgcatgacttcatgatccctctcattc 27819382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 160
Target Start/End: Original strand, 30527594 - 30527706
Alignment:
Q  48 ggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgcc 147  Q
    |||||| | |||||||||||||| | ||||||  |||| | || || || || || | |||| |||||||||| ||||||||||  ||||||||||| ||    
T  30527594 ggcctcggaatccctctcattccagtgtgattcagttcatctataaactatcaggggccgctaattgtcgtgcattgtgcaccgacgaccactccccacc 30527693  T
Q  148 ctcgtcagccttg 160  Q
    ||| ||| |||||    
T  30527694 ctcatcaaccttg 30527706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41913048 - 41912996
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctc 53  Q
    |||||||| |||||||||| ||||| || | |||||||||||| |||||||||    
T  41913048 acaattcttataagccttctttcaaacatgcagtcccatacctgcatggcctc 41912996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 8256604 - 8256436
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  8256604 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggcttcaagatccctctcattccggcgtgatttgattcctctagaagctgtcg 8256505  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  8256504 ggagccgctcattgtcgtgccttgtgcaccggcgactactccccaccctcgtcagccttgggtgttaca 8256436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 29804760 - 29804591
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||  |||||| | ||||| ||||||||||||    
T  29804760 acaattcttataagcctgccttcaaccatgtagtcccatacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcg 29804661  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  29804660 ggagccgctcattatcgtgccttgtgcaccggcgaccactccccgtcctcgtcagccttgggtgttacaa 29804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 25434124 - 25434294
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||  || ||||||||||||||||||||||||| |||||| ||||| | |||||||||||     
T  25434124 acaattcttataagccttccttcaaccatgaagtcccataccagcacggcctcaggatccctctcattccggtgtgattcggttcgtttagaagctgtca 25434223  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaaa 171  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  25434224 ggagccgctcattgtcgtgccttgtgcaccggcggccactccccgccctcgtcagccttgtgtgttacaaa 25434294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 25338065 - 25338234
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || | |||||||| |||||||||||||| ||||||  |||||| |||||||||||     
T  25338065 acaattcttataagccttccttcaaccatgcagtcccatacctgcacgacctcaggaaccctctcattccggtgtgattcagttcctctagaagctgtca 25338164  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  25338165 ggagccgctcattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagccttgggtgttacaa 25338234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33175036 - 33174868
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||  |||||| || |  | |||||| |||||    
T  33175036 acaattcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcg 33174937  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| | ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33174936 ggagccactcattgtcatgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 33174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 41754367 - 41754199
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| || ||||||| || |||||||||||||| ||||||  |||||| |||||||||||     
T  41754367 acaattcttataagccttccttcaaccatgcagtctcatacctgcacggcctcaagaaccctctcattccggtgtgattcagttcctctagaagctgtca 41754268  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  41754267 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcatccttgggtgttaca 41754199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 18447986 - 18448150
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||| ||||||||| |||||| |||||||||| ||||||||||||||| ||||||||  |||||| ||||||| || |||||||||    
T  18447986 acaattcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggatccctatcattccgatgtgattcggttcctctaaaagctgtcg 18448085  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgt 165  Q
    |||  ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  18448086 ggaaccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgccagccttaggtgt 18448150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 18098946 - 18099116
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| | |||||||||| |||||| |||||||||| ||||||||||| ||||||||||||  |||||| ||||||| || |||||||||    
T  18098946 acaattcttataagcatcccttcaaccatgtagtctcatacctacacggcctcaggattcctctcattccgatgtgattcggttcctctataagctgtcg 18099045  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagccttgggtgttacaa 170  Q
    ||||  |||||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||||||||    
T  18099046 ggagctgctcattgtcgtgccttgtgcaccggcgatcactcccctgccctcgtcagccgtgggtgttacaa 18099116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 27882994 - 27883162
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||| | | |||| ||||| | || ||||||||||||||||||||| ||| |||||| ||| | ||||||| ||| ||    
T  27882994 acaattcttataagcattccttcaacaatgcagtctcatacatgcacggcctcaggatccctctcatttcggtgtgattcggtacgtgtagaatctgacg 27883093  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  27883094 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagccttggatgttaca 27883162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 169
Target Start/End: Complemental strand, 33771039 - 33770920
Alignment:
Q  50 cctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccct 149  Q
    |||||||| |||||||||||||| ||||||  |||||| ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  33771039 cctcaggaaccctctcattccggtgtgattcagttcctctagaagctgtcaggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccct 33770940  T
Q  150 cgtcagccttgggtgttaca 169  Q
    ||||||||||||||||||||    
T  33770939 cgtcagccttgggtgttaca 33770920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 1707119 - 1706955
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| |||||||||| || |||||| ||||||||||  | |||||||||| ||||||||||  |||||| ||||||| |||||  |||||    
T  1707119 acaattcttataagtcttccttcaatcatgtagtctcatacctacacagtctcaggatcc-tctcattccgatgtgattcggttcctctagaaattgtcg 1707021  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtt 166  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  1707020 ggagccgctcattgtcgtgccttgtgcaccgacgaccactccccgccctcgttagccttgggtgtt 1706955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 33174581 - 33174415
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||||||||||   ||||||||||||||||| ||| ||||||||||||||||||||  |||||| ||||| | ||||||||||||    
T  33174581 acaattcttataagccttccttcaact--gtagtcccatacctacacggcatcaggatccctctcattccgatgtgattcggttcgtctagaagctgtcg 33174484  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||| ||||   |||||||| |||||||||||||| |||| |||||||||| |||||    
T  33174483 ggagccgctcattgtcatgccccttgcaccggcgaccactccccgccttcgttagccttgggtattaca 33174415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 169
Target Start/End: Original strand, 18098667 - 18098798
Alignment:
Q  39 tacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgacca 138  Q
    |||||||| ||||||||| | ||||||||||||  |||||| | ||||| || ||||||||||||| |||||| |||||||||||||||||||| || ||    
T  18098667 tacctacacggcctcagggttcctctcattccgatgtgattcgattcctctataagctgtcgggagccgctcaatgtcgtgccttgtgcaccggcgatca 18098766  T
Q  139 ctcccc-gccctcgtcagccttgggtgttaca 169  Q
    |||||| ||||||||||||| |||||||||||    
T  18098767 ctcccctgccctcgtcagccgtgggtgttaca 18098798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 15619976 - 15619807
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| | |||||||| | | |||| ||||| | || ||| || ||||||||||||||| |  || ||| ||||| | || ||||| |||    
T  15619976 acaattcttataagcttgccttcaactatgcagtctcatacttgcacggcatcgggatccctctcattctgatgtaattcggttcgtctataagctatcg 15619877  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||||||    
T  15619876 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgctctcatcagtcttgggtgttacaa 15619807  T

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Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 16379471 - 16379302
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||  ||||| ||||||||||||| | |||||||||||| || |||||| ||||||||||||||||    ||||| ||||| | || || |||| |    
T  16379471 acaattcgtataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatccctctcattccaatttgattcggttcgtttataaactgttg 16379372  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccc-cgccctcgtcagccttgggtgttaca 169  Q
    ||||  |||||||||||||||||||||||||| ||||||||||  || |||||||||| |||||||||||    
T  16379371 ggagctgctcattgtcgtgccttgtgcaccggcgaccactcccttgctctcgtcagccgtgggtgttaca 16379302  T

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Target: chr2; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 15639770 - 15639649
Alignment:
Q  49 gcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccc 148  Q
    ||||| ||||||||||||||| |  || ||| ||||| | || ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |    
T  15639770 gcctcgggatccctctcattctgatgtaattcggttcgtctataagctatcgggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgctc 15639671  T
Q  149 tcgtcagccttgggtgttacaa 170  Q
    || |||| ||||||||||||||    
T  15639670 tcatcagtcttgggtgttacaa 15639649  T

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Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 1912583 - 1912434
Alignment:
Q  21 ttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgc 120  Q
    |||||||| |||||| |||||||||||  ||||||||||||||||||||||  ||||||  |||||| || ||||||| | ||| ||||||||||||| |    
T  1912583 ttcaaccatgtagtctcatacctacataacctcaggatccctctcattccgatgtgattcagttcctctaaaagctgttgagagccgctcattgtcgtac 1912484  T
Q  121 cttgtgcaccggtgaccactccc-cgccctcgtcagccttgggtgttaca 169  Q
    ||||||||| || || |||||||  | |||||||| || |||||||||||    
T  1912483 cttgtgcactggcgatcactcccttgtcctcgtcaaccgtgggtgttaca 1912434  T

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Target: chr2; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 38898980 - 38899148
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||  ||||||||||| ||||||  ||||||||| ||||||| |||| ||||| |||||  ||||||||| |  | |||||| |||||    
T  38898980 acaattcttataagctctccttcaaccatgtagtctgatacctacacggcctcaagatcactctccttccgatgtgatttggcttgtctagaagttgtcg 38899079  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| | |||||| || || ||| ||||||   |||||||||||||||||||||| |||| ||||||||    
T  38899080 ggagccactcattttcatgtcttatgcaccaacgaccactccccgccctcgtcagtcttgagtgttaca 38899148  T

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Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30966312 - 30966242
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| | ||||||||||||  | ||||||||||||||||||||||||    
T  30966312 acaattcttataagccttccttcaaccatgcagtcccatacctgtacggcctcaggatccctctcattccg 30966242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24818404 - 24818334
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||| ||||| | |||||||||| | || ||||||||||||||||||||||||    
T  24818404 acaattcttataagccttccttgaaccatgcagtcccatacatgcacggcctcaggatccctctcattccg 24818334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 20179158 - 20179098
Alignment:
Q  109 tcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||| ||||||||| ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  20179158 tcattttcgtgccttatgcaccgatgaccactccccgtcctcgtcaaccttgggtgttaca 20179098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 11388256 - 11388167
Alignment:
Q  11 taagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgg 101  Q
    ||||| |||||||||||| |||||| |||||||||| ||| ||||||| ||||||||||||  |||||| ||||||| || ||| ||||||    
T  11388256 taagcattccttcaaccatgtagtctcatacctacacggcatcaggat-cctctcattccgatgtgattcggttcctctaaaagttgtcgg 11388167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30966768 - 30966698
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||| |||||||||||||| | |||||||||| |  | ||||||||||||||||||||||||    
T  30966768 acaattcttataatccttccttcaaccatgcagtcccatacatgtacggcctcaggatccctctcattccg 30966698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 16379015 - 16378859
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||  ||||| ||||||||||||| | |||| ||||| | || |||||| | |||||||||||||||| |||| | ||||| | || || ||||      
T  16379015 acaattcgtataagacttccttcaaccatgcagtctcatacttgcacggcctcggaatccctctcattccggtgtga-tcggttcatctataaactgtta 16378917  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccact-ccccgccctcgtcagcc 157  Q
    |||  |||||||||||||| ||| |||||||| ||||||| ||| || ||||||||||    
T  16378916 ggaaccgctcattgtcgtgtcttatgcaccggcgaccactaccctgctctcgtcagcc 16378859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29259688 - 29259758
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||| | ||||||||||||||||||| | |||||||||| |  | || |||||||||||||||||||||    
T  29259688 acaattttaataagccttccttcaaccatgcagtcccatacttgtacggtctcaggatccctctcattccg 29259758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 14739392 - 14739440
Alignment:
Q  229 ttcaattcagaattgttaagtagatgtgtcagattagacgttttcttct 277  Q
    |||||| |||||||||| |||| | ||||||||||||||||||||||||    
T  14739392 ttcaatgcagaattgttgagtaaacgtgtcagattagacgttttcttct 14739440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1953233 - 1953150
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggtt 84  Q
    |||||||| ||| | ||||||||||||| | |||| ||||||| || | | ||||||||||||||||||||  |||||| ||||    
T  1953233 acaattcttataggtcttccttcaaccatgcagtctcatacctgcacgacttcaggatccctctcattccgatgtgattcggtt 1953150  T

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Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 25528378 - 25528416
Alignment:
Q  240 attgttaagtagatgtgtcagattagacgttttcttctc 278  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  25528378 attgttgagtagatgtgtcagattagacgttttcctctc 25528416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 11394603 - 11394554
Alignment:
Q  11 taagccttccttcaaccaagtagtcccatacctacatggcctcaggatcc 60  Q
    ||||| |||||||||||| |||||| |||||||||| ||| |||||||||    
T  11394603 taagcattccttcaaccatgtagtctcatacctacacggcatcaggatcc 11394554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20502101 - 20502061
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatac 41  Q
    |||||||| ||||||||||||||||||| | ||||||||||    
T  20502101 acaattcttataagccttccttcaaccatgcagtcccatac 20502061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 8e-64; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 16452001 - 16452172
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||||||  |||||| | ||||| ||||||||||||    
T  16452001 acaattcttataagctttccttcaaccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcg 16452100  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaaat 172  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16452101 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttacaaat 16452172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 16461154 - 16461325
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||||||  |||||| | ||||| ||||||||||||    
T  16461154 acaattcttataagctttccttcaaccatgtagtcccctacctacaaggcctcaggatccctctcattccgatgtgattcgattcctctagaagctgtcg 16461253  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaaat 172  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16461254 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttacaaat 16461325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20054148 - 20054316
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  20054148 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 20054247  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20054248 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 20054316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20054604 - 20054772
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  20054604 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 20054703  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20054704 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 20054772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20055060 - 20055228
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  20055060 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 20055159  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20055160 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 20055228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20055516 - 20055684
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  20055516 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 20055615  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20055616 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 20055684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20055972 - 20056140
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  20055972 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 20056071  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20056072 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 20056140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20056428 - 20056596
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  20056428 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 20056527  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20056528 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 20056596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20057331 - 20057499
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  20057331 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 20057430  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20057431 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 20057499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 52250284 - 52250116
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||    
T  52250284 acaattcttataagccttccttcgaccatgtagtcccatacctacaaggcctcatgatccctctcattccggtgtgattcggttcctctagaagctgtcg 52250185  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  52250184 ggagccgctcattgtcgtgccttgtgcaccggcgaccgctccccgccctcgtcagccttgggtattaca 52250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 38340984 - 38340816
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| || ||||||||||| |||||| ||||||| |||||||||||     
T  38340984 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccatctcattccggtgtgattcggttcctctagaagctgtca 38340885  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    | || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38340884 gtagccgctcattgtcgtgccttgtgcaccggtgaccactccccaccctcgtcagccttgggtgttaca 38340816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20845729 - 20845897
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| || |||||||||| || ||||||||||| |||||| ||||||| |||||||||||     
T  20845729 acaattcttataagccttccttcaaccatgcagtctcatacctgcacggcctcaggaaccgtctcattccggtgtgattcggttcctctagaagctgtca 20845828  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  20845829 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgtcctcgtcagccttgggtgttaca 20845897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 43057591 - 43057759
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||  |||||| ||||||| || |||||||||    
T  43057591 acaattcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcattccgatgtgattcggttcctctaaaagctgtcg 43057690  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||| | ||||||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  43057691 ggagccgctcattggcatgccttgtgcaccggcgaccattccccgccctcttcagccttgggtgttaca 43057759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20057787 - 20057955
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||| |||||||| | |||||||||||| || |||||||||| |||||||||| ||| ||||||  |||||| ||||||||||      
T  20057787 acaattcttataagccttctttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcatttcggtgtgattcagttcctctagaagctgtta 20057886  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  20057887 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcaaccttgggtgttaca 20057955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20056884 - 20057043
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||||||||||||||||||||||  | ||||||||||||         ||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  20056884 acaattctcataagccttccttcaaccctgcagtcccatacct---------caggaaccctctcattccggtgtgattcggttcctctagaagctgtca 20056974  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20056975 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 20057043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 43057133 - 43057300
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    ||||||||  |||||||||||||||||| |||||| |||||||||| ||||| |||||||| ||||||| |  |||||| ||||||| |||||  |||||    
T  43057133 acaattcttctaagccttccttcaaccatgtagtcacatacctacacggccttaggatccc-ctcattctgatgtgattcggttcctctagaaattgtcg 43057231  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  43057232 ggagtcgctcattgtcatgccttgtgcaccggcaaccactccccgtcctcgtcagccttgggtgttaca 43057300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 31822733 - 31822899
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggg 102  Q
    |||||| ||||  ||||||||||||| |||||| |||||||||| ||||||| |||||||||||||| |  ||||||||||| || |||||||||| |||    
T  31822733 aattcttataaatcttccttcaaccatgtagtctcatacctacacggcctcatgatccctctcattctgatgtgatttggttgctctagaagctgttggg 31822832  T
Q  103 agtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    || |||||||| ||||||||| |||||| | |||| |||| |||| ||||||||| |||||||||||    
T  31822833 agccgctcattatcgtgccttctgcaccagcgaccgctcctcgccatcgtcagccgtgggtgttaca 31822899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 51372942 - 51373110
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||||||||||||   |||| |||||||  |||||||| |||||||||||||||  | |||||||||| | | |||||| |||||    
T  51372942 acaattcttataagccttccttcaaccatacagtcacatacctgtatggcctcgggatccctctcattctagtgtgatttggtacgtctagaagatgtcg 51373041  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||||||||||||||||||||| ||||| ||  |||||||  || ||||||||| |||||||||||||    
T  51373042 ggagtcgctcattgtcgtgccttatgcactggcaaccactcttcgtcctcgtcagtcttgggtgttaca 51373110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 12883602 - 12883438
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||  ||||||||| || | |||||||||||| ||  ||||| |||||| ||||||||||| |||||| ||||| | ||||||||||||    
T  12883602 acaattcttataagtattccttcaatcatgcagtcccatacctgcacagcctcgggatccatctcattccggtgtgattcggttcgtctagaagctgtcg 12883503  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgt 165  Q
     ||| ||||||||||||||||||||||||||  |||||||| || ||||||| ||||||| ||||    
T  12883502 agagccgctcattgtcgtgccttgtgcaccgacgaccactcaccaccctcgttagccttgagtgt 12883438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 50003143 - 50003311
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||| | ||||| || |||| ||||| | ||||| |||||| |||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||    
T  50003143 acaattattataagtctccctttaaccatgcagtcctatacctgcatggcctcaggatccctctcattccgatgtgattcggttcctttagaagctgtcg 50003242  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||| |||| || |||||| |||||||  |||||||| | ||||||||||||||| ||| |||||    
T  50003243 ggagccgcacattatcatgccttttgcaccgacgaccactctctgccctcgtcagccttaggtattaca 50003311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 50002775 - 50002902
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||| |||||| |||||||||||| |||||||||||  |||||| || |||| |||||| |||||    
T  50002775 acaattcttataagccttccttcaaccatgcagtcccatgcctacacggcctcaggatctctctcattccgatgtgattcggctcctctagaagatgtcg 50002874  T
Q  101 ggagtcgctcattgtcgtgccttgtgca 128  Q
    |||| ||||||||||| |||||||||||    
T  50002875 ggagccgctcattgtcatgccttgtgca 50002902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 30873018 - 30873188
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| | ||| |||||||||||||   |||| ||||||| || |||||||| |||||||||||||||| |||||| ||||| | |||||  ||||     
T  30873018 acaattcttaaaagtcttccttcaaccatacagtctcatacctgcacggcctcagaatccctctcattccggtgtgattcggttcgtctagaaattgtc- 30873116  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactc--cccgccctcgtcagccttgggtgttacaa 170  Q
    | || ||||||||||||||||||||||||||  ||||||||  | |||||||||||||||||| ||||||||    
T  30873117 gaagccgctcattgtcgtgccttgtgcaccgacgaccactccacgcgccctcgtcagccttggatgttacaa 30873188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 7548169 - 7548003
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||| | ||||| ||||||| || || |||||| |||||||||| ||||||| ||||||||||||| |   ||||||  |||  ||| |||| ||||     
T  7548169 acaatttttataagtcttcctttaatcatgtagtctcatacctacacggcctcatgatccctctcattgcaatgtgattcagtt--tgtcgaagttgtca 7548072  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| || ||||||||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||    
T  7548071 ggagccgttcattgtcgtgccttgtgcaccggtgatcaccccccgccctcgtcagtcctgggtgttaca 7548003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 10820670 - 10820501
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||  ||||||||||||| ||||||| |||| ||||  ||||||  |||||||||| ||||  |||||| ||||| | |||||| |||||    
T  10820670 acaattcttataaatcttccttcaaccatgtagtccaatacatacaccgcctcataatccctctcactccgatgtgattcggttcatctagaagttgtcg 10820571  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    | || || |||||||| ||| ||||||||||| ||||||| |||  |||||||||||||||||| |||||    
T  10820570 gtagccgttcattgtcatgctttgtgcaccggcgaccacttcccatcctcgtcagccttgggtggtacaa 10820501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 280
Target Start/End: Complemental strand, 30420119 - 30420016
Alignment:
Q  177 acaccattcctcaaaaagataggctcatgcttgtctctgattaattggtttgttcaattcagaattgttaagtagatgtgtcagattagacgttttcttc 276  Q
    ||||||| ||| ||||||||||||||||  |||||||||||||||| ||| |||||||||| ||| ||| |||||| |||| ||||||||||||||| ||    
T  30420119 acaccatccctaaaaaagataggctcataattgtctctgattaatttgttcgttcaattcataatagttgagtagacgtgttagattagacgttttcctc 30420020  T
Q  277 tcag 280  Q
    ||||    
T  30420019 tcag 30420016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 50002353 - 50002439
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcct 87  Q
    |||||||| ||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||  |||||| |||||||    
T  50002353 acaattcttataagccttccttcaaccatgtagtcccatgcctacacggcctcatgatccctctcattccgatgtgattcggttcct 50002439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35759676 - 35759746
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||| |||||||||||| | |||||||||||| || ||||||||||||||||||||||||    
T  35759676 acaattcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggatccctctcattccg 35759746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35760982 - 35761052
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||| |||||||||||| | |||| ||||||| || ||||||||||||||||||||||||    
T  35760982 acaattcttataagctttccttcaaccatgcagtctcatacctgcacggcctcaggatccctctcattccg 35761052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 20061259 - 20061327
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattc 69  Q
    |||||||| |||||| |||||||||||| | |||||||||||| || | ||||||||||||||||||||    
T  20061259 acaattcttataagctttccttcaaccatgcagtcccatacctgcacgacctcaggatccctctcattc 20061327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 9189388 - 9189349
Alignment:
Q  133 tgaccactccccgccctcgtcagccttgggtgttacaaat 172  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9189388 tgaccactccccgccctcgtcagccttgggtgttacaaat 9189349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 23180807 - 23180739
Alignment:
Q  2 caattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattcc 70  Q
    ||||||| |||| | |||||||||||| |||||||||| |||||| ||| ||| |||||||||||||||    
T  23180807 caattcttataatcattccttcaaccacgtagtcccattcctacacggcttcaagatccctctcattcc 23180739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 67900 - 67968
Alignment:
Q  103 agtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaaa 171  Q
    |||||||||||||| || ||||| |||||| |||||||||||| |||||||| ||| |||  |||||||    
T  67900 agtcgctcattgtcatgtcttgtacaccggcgaccactccccgtcctcgtcaacctcgggcattacaaa 67968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12728069 - 12728002
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcatt 68  Q
    |||||||| ||||| ||||||||||||| || ||||||||||||||  | ||||| |||||| |||||    
T  12728069 acaattcttataagtcttccttcaaccatgttgtcccatacctacacagtctcagaatccctttcatt 12728002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2328393 - 2328351
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacct 43  Q
    |||||||| ||||||||||||||||||| | ||||||||||||    
T  2328393 acaattcttataagccttccttcaaccatgcagtcccatacct 2328351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 169
Target Start/End: Original strand, 50002443 - 50002487
Alignment:
Q  125 tgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||||| ||| ||||||||||||||||| || |||||||||||    
T  50002443 tgcaccggcgacaactccccgccctcgtcatccgtgggtgttaca 50002487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 154835 - 154668
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  154835 acaattcttataagccttccttcaaccatgtagtcccatacctacaaggcctcaggagccctctcattccggcgtgattcggttcctctagaagctgtcg 154736  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
     ||| ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  154735 agagccgctcattgtcgtgccttgtgcaccggcga-cactccccgccctcatcagccttgggtgttaca 154668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 151686 - 151549
Alignment:
Q  31 tagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcacc 130  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||| |||||||||||| ||  |||||||||||||||||||||||||    
T  151686 tagtcccatacctacaaggcctcaggatcc-tctcatttcggcgtgattcggttcctctagaagctgtcgagac-cgctcattgtcgtgccttgtgcacc 151589  T
Q  131 ggtgaccactccccgccctcgtcagccttgggtgttacaaa 171  Q
    || ||| ||||||||||||||||||| ||||||||||||||    
T  151588 ggcgac-actccccgccctcgtcagcattgggtgttacaaa 151549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12692061 - 12692229
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  12692061 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 12692160  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12692161 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 12692229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 1645811 - 1645979
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||  |||||| ||||||| |||||||||||     
T  1645811 acaattcttataagtcttccttcaaccatgtagtcccatacctacacggcctcaagattcctctcattccgatgtgattcggttcctctagaagctgtca 1645910  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1645911 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 1645979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 4127499 - 4127668
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgt-agaagctgtc 99  Q
    |||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||| | ||||| ||||    
T  4127499 acaattcttataagtcttccttcaactatgtagtcccatacctacatggcctcaggatccctctcattccgatgtgattcggttcctcttagaagttgtc 4127598  T
Q  100 gggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  4127599 gggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagtcttgggtgttaca 4127668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 50398600 - 50398768
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||  |||||| || |  | |||||| |||||    
T  50398600 acaattcttataagccttccttcaaccatgtagtcctatacctacacggcctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtcg 50398699  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50398700 ggagccgctcattgtcatgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 50398768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 4127951 - 4128120
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgt-agaagctgtc 99  Q
    |||||||| |||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||||||||  |||||| | ||||| | |||||||||     
T  4127951 acaattcttataagccttccttcaaccatatagtctcatgcctacatggcctcaggatccctctcattccgatgtgattcgattcctcttagaagctgtt 4128050  T
Q  100 gggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4128051 gggagccgctcattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagccttgggtgttaca 4128120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3169284 - 3169116
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||| | ||||| ||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||  |||||| ||||||| || ||||||||     
T  3169284 acaatttttataagtcttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgattcggttcctctataagctgtca 3169185  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  3169184 ggagtcgctcattgtcgtgtcttgtgcaccggtgaccactccccgtcctcgtcaaccttgggtgttaca 3169116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 23942851 - 23943016
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| ||||| ||||||||||| |||| |||||||||||||||||||  |||||| ||||||| |||||||||||     
T  23942851 acaattcttataagctttccttcaaccatgtagttccatacctacacggccccaggatccctctcattccgatgtgattcggttcctctagaagctgtca 23942950  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||   |||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  23942951 gga---gctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcatccttaggtgttaca 23943016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 29628729 - 29628898
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||||||| ||  |||||| ||||||| |||||||||||     
T  29628729 acaattcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccctctcatttcgatgtgattcggttcctctagaagctgtca 29628828  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    | || | ||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||    
T  29628829 gaagccactcattggcgtgccttgtgcaccggcgaccactccccgtcctcgtccgccttggatgttacaa 29628898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 24629495 - 24629662
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||| ||||| | ||||||||||||||| | |||||||| |||||||||||||| |||||| ||||||| |||||||||||     
T  24629495 acaattcttataagcattcctttaaccatgcagtcccatacctacacgacctcaggaaccctctcattccggtgtgattcggttcctctagaagctgtca 24629594  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
     ||| ||||||||||||||||||||| ||||| |||||||||||  |||||| ||||||||||||||||    
T  24629595 agagccgctcattgtcgtgccttgtgaaccggcgaccactcccc-acctcgttagccttgggtgttaca 24629662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 21220393 - 21220564
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| ||||||||||||  ||||  |||||||||||||||||| |||||||||||||| |  |||||| ||||||| ||||||||| ||    
T  21220393 acaattcttataagcattccttcaaccatatagtttcatacctacatggcctcatgatccctctcattctgatgtgattcggttcctctagaagctgccg 21220492  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccc-cgccctcgtcagccttgggtgttacaaa 171  Q
    |||| ||||||||||||||||||||||||| ||||||||||||  || ||||| || | |||||||||||||    
T  21220493 ggagccgctcattgtcgtgccttgtgcaccagtgaccactcccatgctctcgttagtcgtgggtgttacaaa 21220564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 24629039 - 24629208
Alignment:
Q  1 acaattctcataagcct---tccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctg 97  Q
    |||||||| ||||||||   ||||| ||||| | ||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||  ||||||||    
T  24629039 acaattcttataagcctaattcctttaaccatgcagtcccatacctacacggcctcaggaaccctctcattccggtgtgattcggttcctcaagaagctg 24629138  T
Q  98 tcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtta 167  Q
    || |||| ||||||||||||||||||||||||||| |||||||||   ||||||| |||||| |||||||    
T  24629139 tcaggagccgctcattgtcgtgccttgtgcaccggcgaccactcctgtccctcgttagccttaggtgtta 24629208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 53996177 - 53996317
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||| | |||||| |||||||||||| ||||||||||| |||||| |||||||||||| ||||||||||  |||||| ||||||| || ||| ||| |    
T  53996177 acaatttttataagcattccttcaaccatgtagtcccatatctacatagcctcaggatccttctcattccgatgtgattcggttcctctaaaagttgttg 53996276  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactc 141  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  53996277 ggagccgctcattgtcgtgccttgtgcaccggcgaccactc 53996317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 51331343 - 51331509
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||  |||||| || |  | |||||| | | |    
T  51331343 acaattcttataagccttccttcaaccatgtagtcccatacctacacggcctcatgattcctctcattccgatgtgattcggcttgtctagaagttatag 51331442  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtta 167  Q
    |||  |||||||| || ||||||||||||||   |||||||||||||||| ||||||||||||||||    
T  51331443 ggaaccgctcattatcatgccttgtgcaccgacaaccactccccgccctcatcagccttgggtgtta 51331509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 9423920 - 9424088
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||| | |||||||||| |||||||| | |||||||||| | || | ||||||||||||||||||||||| |||||| ||||| | ||||||  ||||    
T  9423920 acaattattataagccttctttcaaccatgcagtcccatacatgcacgacctcaggatccctctcattccggtgtgattcggttcgtctagaagtcgtcg 9424019  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| | ||| ||||||||||||||||||||  ||||||||||||||||||||  |  |||||||||||    
T  9424020 ggagccactctttgtcgtgccttgtgcaccgacgaccactccccgccctcgtcttctgtgggtgttaca 9424088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 50399055 - 50399226
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||| || |||||||||| || |||||||||||||||||||||  |||||| || |  | |||||| ||||     
T  50399055 acaattcttataagccttccttcaaccatgtaatctcatacctacacggtctcaggatccctctcattccgatgtgattcggcttgtctagaagttgtca 50399154  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttggg-tgttacaaat 172  Q
    | || ||||||||||| |||||||||||| || ||||||| |||||||||||||||| |||| ||||||||||    
T  50399155 gaagccgctcattgtcatgccttgtgcactggcgaccact-cccgccctcgtcagccctgggatgttacaaat 50399226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 14351862 - 14351705
Alignment:
Q  12 aagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctca 111  Q
    ||||||||||||||||| | || | ||||| | || | |||||||||||||||||||| || |||||| ||||  | |||||| ||||||||| ||||||    
T  14351862 aagccttccttcaaccatgcagactcatacatgcacgacctcaggatccctctcattctggtgtgattcggtttgtctagaagttgtcgggagccgctca 14351763  T
Q  112 ttgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||||||||||||||||||  |||||||||   |||  ||||||||||||||||||    
T  14351762 ttgtcgtgccttgtgcaccggcaaccactccctagccttatcagccttgggtgttaca 14351705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14572212 - 14572282
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14572212 acaattcttataagcctcccttcaaccatgtagtcccatacctacatggcctcaggatccctctcattccg 14572282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 21067812 - 21067648
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| | |||||||||||| || |||||| ||||  |   ||||| || |||||| ||||| | || ||  |||||    
T  21067812 acaattcttataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatttc---cattctggtgtgattcggttcgtctataatttgtcg 21067716  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||| |||  |||||||||||||    
T  21067715 ggagccgctcattgtcgtgccttctgcaccggcgaccactccccgccctcatca-acttgggtgttaca 21067648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 53854869 - 53854993
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| |||||||||||||  ||||| ||||||||||  || ||| ||||||||||||||||  |||||| ||||| | || |||||||||    
T  53854869 acaattcttataagtcttccttcaaccatatagtctcatacctacactgcttcatgatccctctcattccgatgtgattcggttcgtctataagctgtcg 53854968  T
Q  101 ggagtcgctcattgtcgtgccttgt 125  Q
    |||| |||||||||||| |||||||    
T  53854969 ggagccgctcattgtcgagccttgt 53854993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 8467862 - 8468029
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| |||||| ||||||| ||  | |||||||||||| |||||| |  ||| || |||| |  ||||||||| |     
T  8467862 acaattcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggatccctttcattctgatgtggttcggttgcc-tagaagctgcca 8467960  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||| || |||| |||||||||||| || ||||||||||||||||||||| ||| ||| ||||||    
T  8467961 ggagccgcgcaatgtcatgccttgtgcactggcgaccactccccgccctcgtcaacctcgggcgttaca 8468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 21067345 - 21067203
Alignment:
Q  16 cttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgt 115  Q
    ||||||||||||| | |||| ||||| | || | |||| |||||||||||||||||| |||||| | ||| | || ||| ||||||||| |||||||| |    
T  21067345 cttccttcaaccatgcagtctcatacatgcacgacctcgggatccctctcattccggtgtgattcgattcgtctataagttgtcgggagccgctcattat 21067246  T
Q  116 cgtgccttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
    ||||||||||||| ||| |||||||| |||  ||| |||||||    
T  21067245 cgtgccttgtgcatcggcgaccactctccgttctcatcagcct 21067203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31817914 - 31818083
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||| | |||| |||||  |||||||| ||||||  |||||| | |||    ||||||| |||    
T  31817914 acaattcttataagccttccttcaaccatgcagtcccatacatgcatgacctcataatccctcttattccgatgtgattcgattcgaccagaagctttcg 31818013  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||  || | |||||| ||||||||||| ||| || |||||||| || ||||||  || |||||||||||    
T  31818014 ggatccgtttattgtcatgccttgtgcatcggcgatcactccccaccatcgtcaatctcgggtgttacaa 31818083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 165
Target Start/End: Original strand, 23943348 - 23943464
Alignment:
Q  49 gcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccc 148  Q
    |||||||||||||| |||||  |  |||||| ||||||| |||||||||||  ||| |||||||||||||||||  | |||||| |||||||| ||| ||    
T  23943348 gcctcaggatccctatcattttgatgtgattcggttcctctagaagctgtcaagagccgctcattgtcgtgcctcatacaccggcgaccactctccgtcc 23943447  T
Q  149 tcgtcagccttgggtgt 165  Q
    |||||| |||| |||||    
T  23943448 tcgtcatccttaggtgt 23943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 27026581 - 27026414
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||||||||||| |  |||||||||||||| ||  | | ||  ||||||||||||| |  |||||| ||||    || |||||  |     
T  27026581 acaattcttataagccttccttcaatcgtgtagtcccatacctgcaccgtc-caatatccctctcattctgatgtgattcggtttgcctaaaagctacca 27026483  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||  ||||||||||| ||| ||||||    
T  27026482 ggagtcgctcattgtcatgccttgtgcaccgacgaccactccccgttctcgtcagcctcgggcgttaca 27026414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7678684 - 7678746
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctc 63  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||    
T  7678684 acaattcttataagccttccttcaaccatgtagccccatacctacaaggcctcaagatccctc 7678746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 158
Target Start/End: Original strand, 31817555 - 31817617
Alignment:
Q  96 tgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
    ||||||||  ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  31817555 tgtcgggaaccgctcattgtcatgccttgtgcactggtgaccactccccggcctcgtcagcct 31817617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35871706 - 35871636
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||  ||||||||||||||||||| | ||||||||||||  | ||||||||||||||||||||||||    
T  35871706 acaattcatataagccttccttcaaccatgaagtcccatacctgtacggcctcaggatccctctcattccg 35871636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 18418560 - 18418611
Alignment:
Q  171 attcaaacaccattcctcaaaaagataggctcatgcttgtctctgattaatt 222  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  18418560 attcagacaccatccctcaaaaagataagctcatgcttgtctctgattaatt 18418611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 49998714 - 49998635
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgattt 80  Q
    |||||||| ||||| ||||||||||||| | |||||||| ||||||  |||| ||||||||||||||||||  |||||||    
T  49998714 acaattcttataagtcttccttcaaccatgcagtcccatgcctacacagccttaggatccctctcattccgatgtgattt 49998635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 1464225 - 1464057
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||  ||| |||||| | ||| || |||||||||| || | || |||||||||||||| |  |||||| ||||| | || ||| |||||    
T  1464225 acaattcttataagttttctttcaactatgtattctcatacctacacggtcgcatgatccctctcattctgatgtgattcggttcgtctaaaaggtgtcg 1464126  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
      || || |||||||| || ||| |||||||| |||||||| ||| | |||| || |||||||||||||    
T  1464125 aaagccgttcattgtcatgtcttatgcaccggcgaccactctccgtcttcgttagtcttgggtgttaca 1464057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 15306168 - 15306227
Alignment:
Q  10 ataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattc 69  Q
    ||||| |||| ||| |||| |||||||||||||||||  |||||||||||||||||||||    
T  15306168 ataagtcttctttcgaccatgtagtcccatacctacacagcctcaggatccctctcattc 15306227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 27029251 - 27029188
Alignment:
Q  106 cgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||||||||| | | |||||||  || ||||||||||||||||||||||||| ||||||||||    
T  27029251 cgctcattgtcatacattgtgcattggcgaccactccccgccctcgtcagcctcgggtgttaca 27029188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23350345 - 23350415
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| | |||||| |||||  | ||||||| |||| |||||||||||    
T  23350345 acaattcttataagccttccttcaaccatgcagtcccctacctgtacggcctcaagatctctctcattccg 23350415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44471387 - 44471457
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||| ||||||||||||| |||||| |||||||  | ||||||| |||| |||||||||||    
T  44471387 acaattcttataagtcttccttcaaccatgtagtctcatacctgtacggcctcaagatctctctcattccg 44471457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 158
Target Start/End: Original strand, 39180716 - 39180768
Alignment:
Q  106 cgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
    ||||||||| | || ||||||||||||||| ||||||||| ||||||||||||    
T  39180716 cgctcattgccatgtcttgtgcaccggtgatcactccccgtcctcgtcagcct 39180768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 10165924 - 10165873
Alignment:
Q  118 tgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||||||||| | | ||||||||||| ||||||||||||||| ||||||||    
T  10165924 tgccttgtgcatccgcgaccactccccaccctcgtcagccttgagtgttaca 10165873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14571783 - 14571850
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcatt 68  Q
    |||||||| |||||| | |||||||||| | ||||||||||||||| || |||| ||||||| |||||    
T  14571783 acaattcttataagcatcccttcaaccatgaagtcccatacctacacggactcaagatccctttcatt 14571850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 20309594 - 20309663
Alignment:
Q  15 ccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggtt 84  Q
    |||||||||||||| |||||| ||||||| ||  | |||| ||||||||||||||||  |||||| ||||    
T  20309594 ccttccttcaaccatgtagtcacatacctgcaaagtctcatgatccctctcattccgatgtgattcggtt 20309663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 33987162 - 33987274
Alignment:
Q  30 gtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcac 129  Q
    |||||| ||||||| || |  |||| ||||||||||||||||  ||||||  |||    ||||||||| |  ||||||||||||||| ||||||||||||    
T  33987162 gtagtcacatacctgcacgatctcatgatccctctcattccgatgtgattcagtttgcctagaagctgccaagagtcgctcattgtcatgccttgtgcac 33987261  T
Q  130 cggtgaccactcc 142  Q
     |  |||||||||    
T  33987262 tgacgaccactcc 33987274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 45682279 - 45682211
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||| |||| ||||| ||||| || |||||||||||  | |||||||||| |||| |||||||||||    
T  45682279 aattcttataaaccttcattcaatcatgtagtcccatatatgcatggcctcaagatctctctcattccg 45682211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 119; Significance: 8e-61; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 3652564 - 3652398
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||  |||||| ||||||| ||||||||||||    
T  3652564 acaattcttataagccttccttcaaccatgtagtcccatacctacacagcctcaggatccctctcattccgatgtgattcggttcctctagaagctgtcg 3652465  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtta 167  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  3652464 ggagccgctcattgtcgtgccttgtgcaccgacgaccactccccgccctcatcagccttgggtgtta 3652398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 20850399 - 20850231
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || ||||||| || |||||||||||||| |||||| ||||||| |||||||||||     
T  20850399 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcatgaaccctctcattccggtgtgattcggttcctctagaagctgtca 20850300  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  20850299 ggagccgctcattgtcgtgccttgtgcaccggcgaccactcctcgccctcgtcagccttgggtgttaca 20850231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23986385 - 23986552
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||||||||  |||||| ||||||| ||||||||||||    
T  23986385 acaattcttataagcctaccttcaaccatgtagtcccatacctacacggcctccggatccctctcattccgatgtgattcggttcctctagaagctgtcg 23986484  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttac 168  Q
    |||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||| ||||    
T  23986485 ggagccgctcattgtcatgccttgtgcaccgacgaccactccccgccctcgtcagccttaggtattac 23986552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2681284 - 2681452
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| |||| |||||||| | ||||||| ||||||| |||||||||| |||||||||||||| |||||| ||||||| ||||| |||||     
T  2681284 acaattcttataagtcttcattcaaccatgcagtcccaaacctacacggcctcaggaaccctctcattccggtgtgattcggttcctctagaaactgtca 2681383  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  2681384 ggagccgctcattgtcgtgccttgtgtaccggcgaccactccccgccctcgtcagccttgggtgttaca 2681452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 3653048 - 3652889
Alignment:
Q  10 ataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgct 109  Q
    |||||||||| |||||||| | |||||||||||||||  |||||||||||||||||||||||  |||| | ||||| | |||||||||||||||| ||||    
T  3653048 ataagccttcgttcaaccatgcagtcccatacctacacagcctcaggatccctctcattccgatgtgagtcggttcatctagaagctgtcgggagccgct 3652949  T
Q  110 cattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  3652948 cattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagtcttgggtgttaca 3652889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 8068467 - 8068360
Alignment:
Q  171 attcaaacaccattcctcaaaaagataggctcatgcttgtctctgattaattggtttgttcaattcagaattgttaagtagatgtgtcagattagacgtt 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8068467 attcaaacaccattcctcaaaaagataggctcatgcttgtctctgattaattggtttgttcaattcagaattgttgagtagatgtgtcagattagacgtt 8068368  T
Q  271 ttcttctc 278  Q
    ||||||||    
T  8068367 ttcttctc 8068360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 14771787 - 14771956
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| | |||| |||||||||| ||| || ||||||||||||||||||||||||| | ||| |  |||||||||||    
T  14771787 acaattcttataagtcttccttcaaccatgcagtctcatacctacacggcttcgggatccctctcattccggcgtgattcgcttcatcaagaagctgtcg 14771886  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||||||||||||||||||||||| ||||||| || ||||||| ||||||||||||| ||||||||||||    
T  14771887 ggagtcgctcattgtcgtgccttgcgcaccggcgatcactccctgccctcgtcagccgtgggtgttacaa 14771956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6330980 - 6331148
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||  |||||| || |  | |||||| |||||    
T  6330980 acaattcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccatctcattccgatgtgattcggcttgtctagaagttgtcg 6331079  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6331080 ggagccgctcattgtcatgccttgtgcaccggcgaccactccccaccctcgtcagccttgggtgttaca 6331148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2720632 - 2720801
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| | |||| ||||||| || | |||  ||||||||||||||||||  ||||||||||| | |||||||||||     
T  2720632 acaattcttataagtcttccttcaaccatgcagtctcatacctgcacgaccttgggatccctctcattccggtatgatttggttcgtctagaagctgtcc 2720731  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    | ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  2720732 gaagtcgctcattgtcgtgacttgtgcaccggcgaccactccccgccctcgtcagccttaggtgttacaa 2720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20896756 - 20896924
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||||  |||||| || |  | |||||| |||||    
T  20896756 acaattcttataagccttccttcaaccatgtagtctcatacctacacggcctaaggatccctctcattccgatgtgattcggcttgtctagaagttgtcg 20896855  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||| ||||||||||| ||| |||||||| ||| |||||||||||||||||||||||    
T  20896856 ggagccgctcattgtcatgccttgtgcaacggcgaccactctccgtcctcgtcagccttgggtgttaca 20896924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 21312049 - 21311881
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| ||  |||||| || ||||||||||| || ||||||  |||||| |||||||| |||    
T  21312049 acaattcttataagccttccttcaaccatgcagtctcatacctgcacagcctcatgaaccctctcattctggtgtgattcagttcctttagaagctatcg 21311950  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||||||||||||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  21311949 ggagtcgctcattgttgtgccttgtgcactggcgaccacttcccgccctcgtcagccttgggtgttaca 21311881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 11062359 - 11062196
Alignment:
Q  5 ttctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggag 104  Q
    |||| ||||||||||||||||||| |||||  ||||||||||  |||||||||||| ||||||  ||  |||||| ||||||| ||||| ||||||||||    
T  11062359 ttcttataagccttccttcaaccatgtagtttcatacctacacagcctcaggatcc-tctcatgtcgatgtgattcggttcctctagaaactgtcgggag 11062261  T
Q  105 tcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
     |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  11062260 ccgctcattgtcgtgccttgtgcaccggtgaccactccccgccttcgtaagccttgggcgttaca 11062196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 23776516 - 23776352
Alignment:
Q  4 attctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggga 103  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||| ||||||||||||| |    
T  23776516 attcttataagtcttccttcaaccatgtagtcccatacctacaaggcctcaggatacctctcattccggcgtgattcagttcctctagaagctgtcggaa 23776417  T
Q  104 gtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttac 168  Q
    | ||||||||||||| |||||| || ||| |||||||| ||  |||||||||| || ||||||||    
T  23776416 gccgctcattgtcgtaccttgtacatcggcgaccactctccatcctcgtcagctttcggtgttac 23776352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 4 - 169
Target Start/End: Original strand, 20126253 - 20126418
Alignment:
Q  4 attctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggga 103  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||  |||| ||||||||||||||||||  ||||||  | |  | |||||| |||| |||    
T  20126253 attcttataagccttccttcaaccatgtagtctcatacctacacagccttaggatccctctcattccgatgtgattcagcttgtctagaagttgtcagga 20126352  T
Q  104 gtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    | ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  20126353 gccgctcattgtcatgccttgtgcaccggcgaccactccccgccctcgtcggccttgggtgttaca 20126418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2890907 - 2891073
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||| |||||||||||||| | |||||||||||| || |||||| |||||| ||||||||    |||||| | ||||| ||||| |||||     
T  2890907 acaattcttataaaccttccttcaaccatgcagtcccatacctgcacggcctcgggatcc-tctcattctaatgtgattcgattcctctagaa-ctgtca 2891004  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| |||||||||||||| ||||||||||||  |||| |||| |||||||||||||||||||||||||    
T  2891005 ggagccgctcattgtcgtggcttgtgcaccggcaaccagtccctgccctcgtcagccttgggtgttaca 2891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 17850965 - 17850827
Alignment:
Q  32 agtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccg 131  Q
    |||||||||| | || | ||||||||||||||||||||||| |||||| ||||| | |||||| |||||| || |||| |||||||||||||||||||||    
T  17850965 agtcccatacttgcacgacctcaggatccctctcattccggtgtgattcggttcgtctagaagttgtcggaagccgctaattgtcgtgccttgtgcaccg 17850866  T
Q  132 gtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    | ||||||| |||||||| || ||||||| || ||||||    
T  17850865 gcgaccacttcccgcccttgttagccttgagtattacaa 17850827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27334239 - 27334108
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| | ||| |||||||| || | |||||||| ||||||| |||||| ||||||  |||||| || ||||||| |    
T  27334239 acaattcttataagctttccttcaaccatgcagttccatacctgcacgacctcaggaaccctctcgttccggtgtgattcagttcctctataagctgttg 27334140  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccgg 132  Q
    ||||||| ||||||||||||||||||||||||    
T  27334139 ggagtcgttcattgtcgtgccttgtgcaccgg 27334108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 27394979 - 27394848
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| | ||| |||||||| || | |||||||| ||||||| |||||| ||||||  |||||| || ||||||| |    
T  27394979 acaattcttataagctttccttcaaccatgcagttccatacctgcacgacctcaggaaccctctcgttccggtgtgattcagttcctctataagctgttg 27394880  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccgg 132  Q
    ||||||| ||||||||||||||||||||||||    
T  27394879 ggagtcgttcattgtcgtgccttgtgcaccgg 27394848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 17851443 - 17851286
Alignment:
Q  10 ataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgct 109  Q
    |||||||||| || ||||| | |||||||||| | || |||||| |||||||||||||||||| |||||| ||||| | |||||| ||||   || ||||    
T  17851443 ataagccttcttttaaccatgcagtcccatacttgcacggcctcgggatccctctcattccggtgtgattcggttcgtctagaagttgtctaaagccgct 17851344  T
Q  110 cattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtta 167  Q
     ||| |||||||||||||||||| || |||| ||||||||||  ||||||||||||||    
T  17851343 aattatcgtgccttgtgcaccggcgaacacttcccgccctcggtagccttgggtgtta 17851286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 31821762 - 31821860
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgg 101  Q
    |||||| |||||| |||||||||||| |||||| |||||||||||||||||| ||||||||||||||||  |||||| |||| || |||||||||||||    
T  31821762 aattcttataagcattccttcaaccatgtagtctcatacctacatggcctcatgatccctctcattccgatgtgattcggtttctctagaagctgtcgg 31821860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 21311593 - 21311423
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||||| | |||||||||| |  | ||||||| || |||||||||||||  |||||| | || || |||||||| |||    
T  21311593 acaattcttataaggcttccttcaaccatgcagtcccatacttgtacggcctcatgaaccctctcattccgatgtgattcgttttctctagaagctttcg 21311494  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcc-ccgccctcgtcagccttgggtgttacaa 170  Q
     ||  | ||||||||||| ||||||||||||| |||||||||   ||||| ||||||| ||||||||||||    
T  21311493 agaacctctcattgtcgttccttgtgcaccggcgaccactcctatgcccttgtcagccgtgggtgttacaa 21311423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 15929277 - 15929111
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| || ||||||||  |||||| |||||||| | ||||||||||||| ||| |||  |  |||||| ||||  | |||||| | ||     
T  15929277 acaattcttataagcttttcttcaaccttgtagtctcatacctaaacggcctcaggatccatcttattatgttgtgattcggttaatctagaagatatct 15929178  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtta 167  Q
    | |||||||||||||| |||||||| || | | ||||||||||| ||||| ||||||||||||||||    
T  15929177 gaagtcgctcattgtcatgccttgtacatcagcgaccactccccaccctcatcagccttgggtgtta 15929111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 15929658 - 15929492
Alignment:
Q  3 aattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcggg 102  Q
    |||||| |||||||||| |||||||| ||||||| |||| |||| ||| | |||||| |||| |||| |  |||||| | ||| | |||||| |||| ||    
T  15929658 aattcttataagccttcattcaaccatgtagtccaatacatacaaggcattaggatctctcttattctgatgtgattcgattcatctagaagttgtccgg 15929559  T
Q  103 agtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    || ||||||||||| |||||| ||||||   |||||| ||| |||||||||| |||||||| |||||    
T  15929558 agccgctcattgtcatgccttatgcaccaacgaccacacccggccctcgtcatccttgggtattaca 15929492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 33775072 - 33775241
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||| |||||||||||||| |  ||| ||||| | || ||||||  |||| |||||||||| | |||||| | ||  ||||||| |||| |    
T  33775072 acaattcttataatccttccttcaaccatgcggtcacatacttgcacggcctcgcgatcactctcattccagtgtgattcgttttgtgtagaaactgttg 33775171  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    ||||  ||||||| |||||||||||||||||  ||||||| || | |||| ||| |||||||||||||||    
T  33775172 ggagctgctcattatcgtgccttgtgcaccgacgaccactacctgtcctcatcaaccttgggtgttacaa 33775241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13191581 - 13191660
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgattt 80  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||| | || ||||||||||||||||||  |||||||    
T  13191581 acaattcttataagccttccttcaaccatgcagtcccatacctacatagtcttaggatccctctcattccgatgtgattt 13191660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 17027599 - 17027678
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgattt 80  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||| |||||||||||||||||  |||||||    
T  17027599 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgattt 17027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16520046 - 16519976
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||| |||||||||||||||||| |||| |||||| ||||||||||  |||||||||||||||||||||||    
T  16520046 acaaatctcataagccttccttcgaccatgtagtctcatacctacacagcctcaggatccctctcattccg 16519976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20735773 - 20735621
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggtt-cctgtagaagctgtc 99  Q
    |||||||| |||||||||||| ||| || |||||| ||||||||||  | |||| |||||||||||||  |  ||||| ||||| ||||   ||| ||||    
T  20735773 acaattcttataagccttcctacaatcatgtagtcacatacctacacagtctcaagatccctctcattatgatgtgatctggttgcctg--aaagttgtc 20735676  T
Q  100 gggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtca 154  Q
     ||||||||||||||||  ||||| |||||||| || ||| || |||||||||||    
T  20735675 aggagtcgctcattgtcaagccttatgcaccggcgatcacccctcgccctcgtca 20735621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9440496 - 9440566
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||||||| |||||||| | |||||||||||| || | | ||||||||||||||||||||    
T  9440496 acaattcttataagccttcattcaaccatgaagtcccatacctgcacgacttcaggatccctctcattccg 9440566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17731181 - 17731251
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||| ||||||| ||||| | ||||||||||||  | ||||||||||||||||||||||||    
T  17731181 acaattcttataagtcttcctttaaccatgcagtcccatacctgaacggcctcaggatccctctcattccg 17731251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13492867 - 13492797
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||| | ||||||||||||||||||| | |||| ||||||| ||  |||||||||||| ||||||||||    
T  13492867 acaattattataagccttccttcaaccatgcagtctcatacctgcacagcctcaggatccttctcattccg 13492797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7911956 - 7911886
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||  |||||||||||| | ||||| |||||| || ||||||  ||||||||||||||||    
T  7911956 acaattcttataagttttccttcaaccatgcagtcctatacctgcacggcctcgagatccctctcattccg 7911886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 7912372 - 7912318
Alignment:
Q  17 ttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||||||| | |||||||||||| || ||||||  ||||||||||||||||    
T  7912372 ttccttcaaccatgcagtcccatacctgcacggcctcgagatccctctcattccg 7912318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 9352131 - 9352073
Alignment:
Q  10 ataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcatt 68  Q
    ||||| || ||||| |||| |||||| ||||||||||  ||||||||||||||||||||    
T  9352131 ataagtctcccttcgaccatgtagtctcatacctacacagcctcaggatccctctcatt 9352073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9440377 - 9440447
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||| ||| |||||||| | ||| |||||||| || | | ||||||||||||||||||||    
T  9440377 acaattcttataagctttcattcaaccatgcagttccatacctgcacgacttcaggatccctctcattccg 9440447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 1298 - 1130
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||| || ||||||||||| |||||| ||||||| |||||| ||||     
T  1298 acaattcttataagccttccttcaaccatgcagtcccatacctgcatggcctcaggaaccgtctcattccggtgtgattcggttcctctagaagttgtca 1199  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1198 ggagccgctcattgtcgtgccttgtgcaccggcgaccactccccgccctcgtcagccttgggtgttaca 1130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 2820 - 2651
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||  |||||| | ||||| |||||| |||||    
T  2820 acaattcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcatttcgatgtgattcgattcctctagaagttgtcg 2721  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| | |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  2720 ggagccactcattgtcgtgccttgtgctccggcgaccactccccgccctcgtcagccttgggtgttacaa 2651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 4639 - 4470
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    ||||||||  ||| |||||||||||||| | |||||||||||| ||||||||||||| ||||||| |||||  |||||| ||||||| |||||||||||     
T  4639 acaattcttctaaaccttccttcaaccatgcagtcccatacctgcatggcctcaggaaccctctccttccgatgtgattcggttcctctagaagctgtca 4540  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttacaa 170  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||    
T  4539 ggagccgctcattgtcgtgccttgtgcaccggcggccactcctcgccctcgtcagccttgggtgttacaa 4470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 15 - 169
Target Start/End: Complemental strand, 5080 - 4926
Alignment:
Q  15 ccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattg 114  Q
    |||||||||||||| | |||||||||||| ||||||||||||| |||||||||||||| |||||| ||||||| |||||| |||| |||| |||| ||||    
T  5080 ccttccttcaaccatgcagtcccatacctgcatggcctcaggaaccctctcattccggtgtgattcggttcctctagaagttgtcaggagccgctaattg 4981  T
Q  115 tcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  4980 tcgtgccttgtgcaccggcgaccactcctcgccctcgtcagccttaggtgttaca 4926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 23751 - 23583
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || ||||||| || |||||||||| ||| |||||| ||||||| |||| ||  ||     
T  23751 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaagaaccctctcatttcggtgtgattcggttcctctagatgccatca 23652  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  23651 ggagccgctcattgtcgtgccttgtgcaccggcgaccattccccgccctcgtcagccttgggtgttaca 23583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 86; Significance: 4e-41; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 18202 - 18371
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| ||||| ||||||||||| | |||||| |||||||||| ||||||||||||||||||||||||  ||||||  |||||| ||||||||||||    
T  18202 acaattcttataagtcttccttcaactatgtagtcacatacctacacggcctcaggatccctctcattccgatgtgattcagttcctctagaagctgtcg 18301  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagccttgggtgttaca 169  Q
    |||| ||||||||||||||||| ||||||| | |||||||||||  ||||| |||||| ||||| |||||    
T  18302 ggagccgctcattgtcgtgcctggtgcaccagcgaccactccccttccctcatcagccgtgggtattaca 18371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17666 - 17809
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| |  || ||| |||||||  ||||| |||||    
T  17666 acaattcttataagctttccttcaaccatgtagtcccatacctacacggcctcaggatccctctcattctgatgtcattcggttcctcaagaagttgtcg 17765  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc 144  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||    
T  17766 ggagccgctcattgtcgtgcctggtgcaccggcgaccactcccc 17809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 17820 - 17916
Alignment:
Q  74 gtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtgaccactcccc-gccctcgtcagccttgggtgttaca 169  Q
    |||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||  |||||||||||| |||||||||||    
T  17820 gtgattcggttcctctagaagctgtcgggagccgctcattgtcgtgcctcgtgcaccggcgaccactccccttccctcgtcagccgtgggtgttaca 17916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 169
Target Start/End: Complemental strand, 800 - 660
Alignment:
Q  29 agtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgca 128  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||| || ||| ||||||||| ||||||||||||| |||||||||    
T  800 agtagtcccatacctacatggcctcaggatccctctcattccgatgtgattcggttcctctataagttgtcgggagccgctcattgtcgtaccttgtgca 701  T
Q  129 ccggtgaccactccccgccctcgtcagccttgggtgttaca 169  Q
    || | |  ||||||||  ||||||||||||| |||||||||    
T  700 ccagcggtcactcccctgcctcgtcagccttaggtgttaca 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 169
Target Start/End: Complemental strand, 2548 - 2414
Alignment:
Q  36 ccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcgggagtcgctcattgtcgtgccttgtgcaccggtga 135  Q
    |||||||||||||||||||||||||||||||||| |  |||||| ||||||| || ||| | ||||||| ||||||||||||||||||||||||||| ||    
T  2548 ccatacctacatggcctcaggatccctctcattctgatgtgattcggttcctctataagttttcgggagccgctcattgtcgtgccttgtgcaccggcga 2449  T
Q  136 ccactccc-cgccctcgtcagccttgggtgttaca 169  Q
     |||||||  ||||| ||||||||| |||||||||    
T  2448 tcactcccttgcccttgtcagccttaggtgttaca 2414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 245164 - 245094
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  245164 acaattcttataagcctcccttcaaccatgtagtcccatacctacatggcctcaggatccctctcattccg 245094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 245593 - 245526
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcatt 68  Q
    |||||||| |||||| | |||||||||| | ||||||||||||||| || |||| ||||||| |||||    
T  245593 acaattcttataagcatcccttcaaccatgaagtcccatacctacacggactcaagatccctttcatt 245526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19044 - 18965
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgattt 80  Q
    |||||||| ||||||||||||||||||| | |||||||||||| || |||||| |||||||||||||||||  |||||||    
T  19044 acaattcttataagccttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccgatgtgattt 18965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 18203 - 18259
Alignment:
Q  15 ccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||||||||| | |||||||||||| || |||||| |||||||||||||||||    
T  18203 ccttccttcaaccatgcagtcccatacctgcacggcctctggatccctctcattccg 18259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 4050 - 4207
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcctgtagaagctgtcg 100  Q
    |||||||| |||||| |||||||||| | | |||||||||||| || |||||| ||||||||||||||| || ||||||   |   | |||||| ||| |    
T  4050 acaattcttataagcattccttcaacaatgcagtcccatacctgcacggcctcgggatccctctcattctggtgtgattcaatagatctagaagttgttg 4149  T
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagccttgggtgtta 167  Q
    |||||||||||| ||||||         || | ||||||||||||||||||||||||||||||||||    
T  4150 ggagtcgctcatagtcgtg---------ccagcgaccactccccgccctcgtcagccttgggtgtta 4207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2278 - 2348
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| |||||||||||||| || ||||| ||||||| ||||||||||    
T  2278 acaattcttataagccttccttcaaccatgtagtcccatacctgcacggccttaggatccttctcattccg 2348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 107531 - 107601
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||||||||| | ||||||||||||  | |||||||| |||||||||||||||    
T  107531 acaattcttataagccttccttcaaccatgcagtcccatacctgtacggcctcagaatccctctcattccg 107601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10378 - 10308
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||||||||||| ||||| | |||||||||| | || ||||||||||||||||||||||||    
T  10378 acaattcttataagccttccttgaaccatgcagtcccatacatgcacggcctcaggatccctctcattccg 10308  T

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Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 142342 - 142412
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| |||| | |||||||||||| | |||||||||||| || ||||||||||||||||||||||||    
T  142342 acaattcttataaacattccttcaaccatgaagtcccatacctgcacggcctcaggatccctctcattccg 142412  T

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Target: scaffold0499 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 2119 - 2204
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgatttggttcc 86  Q
    |||||||| ||||||||||||||||||| | |||| ||||||| || |||||||||| |||| |||||| || |||||| ||||||    
T  2119 acaattcttataagccttccttcaaccatgcagtctcatacctgcacggcctcaggaaccctttcattctggtgtgattcggttcc 2204  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 105798 - 105719
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccggcgtgattt 80  Q
    |||||||| ||||||||||||||||||  | ||| ||||||||  | ||||||||||||||||||||||||  |||||||    
T  105798 acaattcttataagccttccttcaaccctgcagttccatacctgtacggcctcaggatccctctcattccgatgtgattt 105719  T

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Target: scaffold0024; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 169
Target Start/End: Complemental strand, 105689 - 105654
Alignment:
Q  134 gaccactccccgccctcgtcagccttgggtgttaca 169  Q
    ||||||||||||||||| ||||||||||||||||||    
T  105689 gaccactccccgccctcatcagccttgggtgttaca 105654  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 162746 - 162816
Alignment:
Q  1 acaattctcataagccttccttcaaccaagtagtcccatacctacatggcctcaggatccctctcattccg 71  Q
    |||||||| ||||| ||||||||||||| | |||| |||||||  | ||||||||||||||||||||||||    
T  162746 acaattcttataagtcttccttcaaccatgcagtcacatacctgtacggcctcaggatccctctcattccg 162816  T

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Target: scaffold0391 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 14720 - 14663
Alignment:
Q  101 ggagtcgctcattgtcgtgccttgtgcaccggtgaccactccccgccctcgtcagcct 158  Q
    |||| ||||||||||| |||||| |||||||| |||||||| ||| ||||||||||||    
T  14720 ggagccgctcattgtcatgccttttgcaccggcgaccactctccgtcctcgtcagcct 14663  T

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